View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17408_low_61 (Length: 265)
Name: NF17408_low_61
Description: NF17408
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17408_low_61 |
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Alignment Details
Target: chr5 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 65 - 255
Target Start/End: Complemental strand, 11688529 - 11688339
Alignment:
| Q |
65 |
agctgaaaattccaacattttggtatgtttctaaattaattttcttaggatggtattaattaaacaaagtagttggactcttgagtttttcaacaattaa |
164 |
Q |
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| T |
11688529 |
agctgaaaattccaacattttggtatgtttctaaattaattttcttaggatggtattaattaaacaaagtagttggactcttgagtttttcaacaattaa |
11688430 |
T |
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| Q |
165 |
aagaactattacttgcaatgactattcttgttttgttaatactataattcaaaaggttgaaaacattgattagtttgtttgttttcctttg |
255 |
Q |
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| T |
11688429 |
aagaactattacttgcaatgactattcttgttttgttaatactataattcaaaaggttgaaaacattgattagtttgtttgttttcctttg |
11688339 |
T |
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