View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17408_low_84 (Length: 226)

Name: NF17408_low_84
Description: NF17408
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17408_low_84
NF17408_low_84
[»] chr4 (46 HSPs)
chr4 (30-160)||(30298910-30299043)
chr4 (30-160)||(30327778-30327911)
chr4 (29-128)||(12895116-12895211)
chr4 (46-129)||(23292985-23293065)
chr4 (28-129)||(49430982-49431086)
chr4 (29-129)||(12797337-12797438)
chr4 (53-129)||(42640513-42640589)
chr4 (46-129)||(21945483-21945563)
chr4 (28-126)||(29205408-29205501)
chr4 (127-160)||(5775309-5775342)
chr4 (96-129)||(16073421-16073454)
chr4 (127-160)||(23292931-23292964)
chr4 (123-160)||(28470442-28470479)
chr4 (128-160)||(715550-715582)
chr4 (128-160)||(752876-752908)
chr4 (93-129)||(6879464-6879500)
chr4 (27-82)||(24543941-24543997)
chr4 (128-160)||(28084606-28084638)
chr4 (93-129)||(28964247-28964283)
chr4 (93-129)||(54580022-54580058)
chr4 (129-160)||(4383449-4383480)
chr4 (93-128)||(11596352-11596387)
chr4 (129-160)||(22440562-22440593)
chr4 (93-127)||(715608-715642)
chr4 (93-127)||(752934-752968)
chr4 (130-160)||(3064873-3064903)
chr4 (126-160)||(11596302-11596336)
chr4 (126-160)||(12895219-12895253)
chr4 (97-127)||(28000743-28000773)
chr4 (106-159)||(30094066-30094126)
chr4 (93-126)||(6485613-6485646)
chr4 (27-56)||(22234954-22234983)
chr4 (127-160)||(36635411-36635444)
chr4 (127-160)||(40784034-40784067)
chr4 (127-160)||(53381535-53381568)
chr4 (96-128)||(3947766-3947798)
chr4 (28-56)||(4157102-4157130)
chr4 (93-129)||(4157173-4157209)
chr4 (93-129)||(4157460-4157496)
chr4 (28-80)||(7970483-7970535)
chr4 (93-129)||(8423717-8423753)
chr4 (120-160)||(18844428-18844467)
chr4 (28-56)||(20633429-20633457)
chr4 (128-160)||(28964193-28964225)
chr4 (128-160)||(29205550-29205582)
chr4 (30-83)||(35723427-35723484)
[»] chr2 (58 HSPs)
chr2 (27-129)||(37558938-37559037)
chr2 (46-160)||(19536366-19536477)
chr2 (97-157)||(34691777-34691836)
chr2 (97-157)||(34714189-34714248)
chr2 (93-160)||(18255949-18256015)
chr2 (46-160)||(20539637-20539753)
chr2 (26-127)||(18841014-18841117)
chr2 (28-129)||(30404849-30404952)
chr2 (28-160)||(39323226-39323352)
chr2 (28-128)||(37419704-37419802)
chr2 (93-129)||(2438718-2438754)
chr2 (93-128)||(18421987-18422022)
chr2 (95-160)||(34221468-34221530)
chr2 (127-160)||(2438664-2438697)
chr2 (46-127)||(11223864-11223942)
chr2 (46-127)||(14996224-14996303)
chr2 (44-121)||(21374706-21374780)
chr2 (96-129)||(21624294-21624327)
chr2 (127-160)||(37419835-37419868)
chr2 (93-129)||(5040758-5040794)
chr2 (46-82)||(6940235-6940271)
chr2 (128-160)||(26769604-26769636)
chr2 (93-129)||(44635522-44635558)
chr2 (93-128)||(974771-974806)
chr2 (93-128)||(15657888-15657923)
chr2 (46-129)||(15972853-15972933)
chr2 (28-83)||(19580323-19580378)
chr2 (93-128)||(23058442-23058477)
chr2 (47-82)||(24894370-24894405)
chr2 (26-57)||(27084228-27084259)
chr2 (93-128)||(30717530-30717565)
chr2 (93-128)||(33153448-33153483)
chr2 (126-160)||(17776678-17776712)
chr2 (127-157)||(23354589-23354619)
chr2 (127-160)||(11223798-11223831)
chr2 (95-128)||(12668423-12668456)
chr2 (46-83)||(12940977-12941014)
chr2 (127-160)||(18840958-18840991)
chr2 (127-160)||(19942346-19942379)
chr2 (127-160)||(23058389-23058422)
chr2 (127-160)||(23354929-23354962)
chr2 (27-56)||(26769460-26769489)
chr2 (27-56)||(27447088-27447117)
chr2 (95-128)||(33884077-33884110)
chr2 (95-128)||(36756344-36756377)
chr2 (127-160)||(38117104-38117137)
chr2 (28-69)||(41843403-41843444)
chr2 (28-57)||(44770206-44770235)
chr2 (128-160)||(3444831-3444863)
chr2 (93-129)||(5367216-5367252)
chr2 (93-129)||(20242726-20242762)
chr2 (97-129)||(20473350-20473382)
chr2 (28-56)||(21374781-21374809)
chr2 (46-82)||(21624246-21624282)
chr2 (51-83)||(27460011-27460043)
chr2 (97-129)||(27460065-27460097)
chr2 (93-129)||(28596493-28596529)
chr2 (128-160)||(42511327-42511359)
[»] chr5 (48 HSPs)
chr5 (28-160)||(14674231-14674363)
chr5 (93-160)||(10298593-10298664)
chr5 (43-128)||(39698518-39698600)
chr5 (46-129)||(21191055-21191135)
chr5 (31-160)||(8419985-8420117)
chr5 (28-125)||(43001762-43001856)
chr5 (117-160)||(22423769-22423812)
chr5 (93-129)||(6247646-6247682)
chr5 (93-129)||(15884012-15884048)
chr5 (46-129)||(15382457-15382539)
chr5 (46-128)||(21522730-21522809)
chr5 (46-128)||(21533296-21533375)
chr5 (93-127)||(21351906-21351940)
chr5 (126-160)||(35017123-35017157)
chr5 (127-160)||(14873603-14873636)
chr5 (127-160)||(17123128-17123161)
chr5 (47-128)||(19579682-19579760)
chr5 (127-160)||(21191001-21191034)
chr5 (95-128)||(21542056-21542089)
chr5 (46-83)||(22013394-22013431)
chr5 (128-160)||(4105341-4105373)
chr5 (27-83)||(6035444-6035500)
chr5 (128-160)||(21576690-21576722)
chr5 (93-129)||(21576744-21576780)
chr5 (93-129)||(33178049-33178085)
chr5 (128-160)||(39268543-39268575)
chr5 (93-124)||(7218271-7218302)
chr5 (93-128)||(13287399-13287434)
chr5 (129-160)||(43001888-43001919)
chr5 (31-128)||(3966467-3966562)
chr5 (127-157)||(17088372-17088402)
chr5 (127-161)||(21194067-21194101)
chr5 (95-129)||(24906300-24906334)
chr5 (130-160)||(39698636-39698666)
chr5 (93-127)||(42893384-42893418)
chr5 (36-129)||(43564853-43564941)
chr5 (27-56)||(15382420-15382449)
chr5 (46-83)||(19552585-19552622)
chr5 (127-160)||(19820333-19820366)
chr5 (46-83)||(36642804-36642841)
chr5 (95-128)||(41633761-41633794)
chr5 (127-160)||(43564962-43564995)
chr5 (128-160)||(3966596-3966628)
chr5 (46-82)||(6770523-6770559)
chr5 (46-82)||(15410491-15410527)
chr5 (128-160)||(23015929-23015961)
chr5 (93-129)||(28588673-28588709)
chr5 (30-58)||(41995417-41995445)
[»] chr6 (56 HSPs)
chr6 (29-129)||(28152062-28152158)
chr6 (26-129)||(17841588-17841688)
chr6 (46-160)||(426483-426593)
chr6 (29-152)||(7801132-7801259)
chr6 (27-128)||(10770674-10770777)
chr6 (46-128)||(16766677-16766756)
chr6 (28-121)||(17302518-17302609)
chr6 (93-160)||(5732479-5732545)
chr6 (46-129)||(34595114-34595194)
chr6 (46-128)||(8365519-8365598)
chr6 (46-128)||(9107370-9107449)
chr6 (46-128)||(12696304-12696383)
chr6 (93-152)||(7027266-7027323)
chr6 (93-152)||(9911495-9911563)
chr6 (169-208)||(1694309-1694348)
chr6 (46-160)||(7938096-7938214)
chr6 (46-129)||(7977829-7977909)
chr6 (46-129)||(8776972-8777052)
chr6 (46-128)||(3398599-3398677)
chr6 (95-129)||(28715321-28715355)
chr6 (93-126)||(9522915-9522948)
chr6 (30-126)||(16833267-16833365)
chr6 (97-129)||(16388216-16388248)
chr6 (128-160)||(17327595-17327627)
chr6 (129-160)||(4878025-4878056)
chr6 (28-83)||(10842494-10842549)
chr6 (93-128)||(31384944-31384979)
chr6 (94-129)||(32978898-32978933)
chr6 (95-129)||(6898280-6898314)
chr6 (46-128)||(9027158-9027237)
chr6 (28-82)||(17435162-17435215)
chr6 (130-160)||(17841534-17841564)
chr6 (95-129)||(26402679-26402713)
chr6 (28-58)||(34225886-34225916)
chr6 (52-129)||(3209367-3209442)
chr6 (131-160)||(7723204-7723233)
chr6 (27-56)||(7938059-7938088)
chr6 (127-160)||(8389413-8389446)
chr6 (127-160)||(9025450-9025483)
chr6 (95-128)||(21395308-21395341)
chr6 (94-127)||(27904037-27904070)
chr6 (127-160)||(31385011-31385044)
chr6 (127-160)||(31959231-31959264)
chr6 (127-160)||(34595215-34595248)
chr6 (93-129)||(403863-403899)
chr6 (93-129)||(853858-853894)
chr6 (93-129)||(1700376-1700412)
chr6 (93-129)||(4877967-4878003)
chr6 (93-129)||(7265592-7265628)
chr6 (128-160)||(8365453-8365485)
chr6 (128-160)||(8805529-8805561)
chr6 (46-82)||(9658859-9658895)
chr6 (128-160)||(10339059-10339091)
chr6 (28-56)||(18367781-18367809)
chr6 (43-83)||(19147445-19147485)
chr6 (93-129)||(32511665-32511701)
[»] chr1 (69 HSPs)
chr1 (29-129)||(46348382-46348479)
chr1 (33-83)||(18556498-18556548)
chr1 (27-160)||(48450555-48450690)
chr1 (46-128)||(1486709-1486788)
chr1 (47-129)||(42359448-42359527)
chr1 (28-145)||(31672879-31672987)
chr1 (96-160)||(24334669-24334737)
chr1 (28-128)||(24577186-24577289)
chr1 (28-129)||(51409981-51410085)
chr1 (48-129)||(22515886-22515964)
chr1 (27-160)||(35702547-35702692)
chr1 (44-129)||(38078660-38078742)
chr1 (29-128)||(6427425-6427523)
chr1 (93-129)||(18337353-18337389)
chr1 (95-160)||(41877437-41877503)
chr1 (27-121)||(14359529-14359624)
chr1 (93-128)||(47989521-47989556)
chr1 (46-160)||(398738-398844)
chr1 (93-127)||(1815281-1815315)
chr1 (46-128)||(5944261-5944342)
chr1 (95-129)||(19058855-19058889)
chr1 (93-127)||(40258934-40258968)
chr1 (126-160)||(47989588-47989622)
chr1 (95-128)||(6612171-6612204)
chr1 (52-129)||(22881615-22881689)
chr1 (27-127)||(28273089-28273191)
chr1 (127-160)||(42359394-42359427)
chr1 (56-128)||(113289-113358)
chr1 (128-160)||(37598913-37598945)
chr1 (93-128)||(1704992-1705027)
chr1 (93-128)||(6332694-6332729)
chr1 (28-83)||(6427313-6427367)
chr1 (129-160)||(16297226-16297257)
chr1 (95-126)||(21378604-21378635)
chr1 (129-160)||(22947813-22947844)
chr1 (93-160)||(30359412-30359479)
chr1 (93-128)||(31694710-31694745)
chr1 (94-128)||(2218264-2218298)
chr1 (127-161)||(5898210-5898244)
chr1 (93-160)||(17705551-17705621)
chr1 (130-160)||(21365997-21366027)
chr1 (130-160)||(22515832-22515862)
chr1 (93-123)||(31015067-31015097)
chr1 (28-129)||(37598793-37598891)
chr1 (127-160)||(1486649-1486682)
chr1 (95-128)||(5376500-5376533)
chr1 (46-83)||(5927382-5927419)
chr1 (127-160)||(9828136-9828169)
chr1 (127-160)||(16812637-16812670)
chr1 (127-160)||(26830668-26830701)
chr1 (127-160)||(27965945-27965978)
chr1 (95-128)||(30173762-30173795)
chr1 (127-160)||(34741927-34741960)
chr1 (46-83)||(40917731-40917768)
chr1 (127-160)||(40917841-40917874)
chr1 (46-83)||(48040504-48040541)
chr1 (27-56)||(48548049-48548078)
chr1 (47-83)||(2896163-2896199)
chr1 (28-56)||(10577822-10577850)
chr1 (128-160)||(15765840-15765872)
chr1 (95-127)||(18190109-18190141)
chr1 (128-160)||(18556390-18556422)
chr1 (93-129)||(21620979-21621015)
chr1 (28-56)||(25934572-25934600)
chr1 (43-83)||(29144400-29144440)
chr1 (93-129)||(30749864-30749900)
chr1 (93-129)||(30771315-30771351)
chr1 (128-160)||(36878548-36878580)
chr1 (28-56)||(38078743-38078771)
[»] scaffold0027 (1 HSPs)
scaffold0027 (46-160)||(46662-46771)
[»] chr8 (39 HSPs)
chr8 (26-129)||(36450753-36450853)
chr8 (46-128)||(22651956-22652035)
chr8 (93-160)||(31514897-31514968)
chr8 (93-129)||(4948676-4948712)
chr8 (46-126)||(29510306-29510383)
chr8 (46-129)||(20873049-20873129)
chr8 (93-128)||(25566865-25566900)
chr8 (93-160)||(30077356-30077422)
chr8 (28-83)||(31109560-31109615)
chr8 (46-128)||(24669413-24669492)
chr8 (93-135)||(40332215-40332256)
chr8 (29-82)||(22204603-22204655)
chr8 (28-129)||(22595950-22596054)
chr8 (96-158)||(30271224-30271287)
chr8 (128-161)||(31109462-31109495)
chr8 (93-129)||(24613544-24613580)
chr8 (93-128)||(2572056-2572091)
chr8 (93-128)||(8342996-8343031)
chr8 (93-160)||(34897109-34897175)
chr8 (28-62)||(5137484-5137518)
chr8 (43-129)||(5813569-5813652)
chr8 (46-128)||(13436964-13437043)
chr8 (49-83)||(25192389-25192423)
chr8 (93-127)||(31557020-31557054)
chr8 (127-160)||(15816063-15816096)
chr8 (127-160)||(16987994-16988027)
chr8 (127-160)||(17751737-17751770)
chr8 (127-160)||(17760724-17760757)
chr8 (93-122)||(18407743-18407772)
chr8 (127-160)||(22652068-22652101)
chr8 (127-160)||(25566911-25566944)
chr8 (127-160)||(29510238-29510271)
chr8 (127-160)||(39820509-39820542)
chr8 (28-56)||(3951616-3951644)
chr8 (93-129)||(4786337-4786373)
chr8 (97-129)||(15023256-15023288)
chr8 (28-56)||(20785546-20785574)
chr8 (28-56)||(24413647-24413675)
chr8 (93-160)||(27213571-27213639)
[»] chr7 (51 HSPs)
chr7 (46-160)||(27945021-27945132)
chr7 (27-129)||(15680770-15680869)
chr7 (27-128)||(18215186-18215284)
chr7 (46-128)||(5409836-5409915)
chr7 (28-82)||(7197340-7197394)
chr7 (46-128)||(24339622-24339701)
chr7 (29-83)||(25791616-25791670)
chr7 (48-83)||(12010022-12010057)
chr7 (93-128)||(18039023-18039058)
chr7 (93-128)||(21560527-21560562)
chr7 (95-129)||(21880178-21880212)
chr7 (51-129)||(25481887-25481962)
chr7 (27-124)||(26033465-26033557)
chr7 (95-160)||(28155596-28155668)
chr7 (127-160)||(5409776-5409809)
chr7 (46-127)||(11061077-11061155)
chr7 (46-83)||(24105658-24105695)
chr7 (93-149)||(3721117-3721172)
chr7 (27-83)||(11072259-11072315)
chr7 (27-83)||(26019673-26019729)
chr7 (27-83)||(32308081-32308137)
chr7 (93-128)||(2334274-2334309)
chr7 (93-128)||(3991348-3991383)
chr7 (93-128)||(9408334-9408369)
chr7 (93-128)||(9778524-9778559)
chr7 (97-128)||(11272586-11272617)
chr7 (46-128)||(13770671-13770750)
chr7 (129-160)||(29763134-29763165)
chr7 (93-128)||(32094020-32094055)
chr7 (129-160)||(35862034-35862065)
chr7 (93-127)||(7438730-7438764)
chr7 (30-83)||(11665482-11665536)
chr7 (28-62)||(19213773-19213807)
chr7 (126-160)||(28973886-28973920)
chr7 (93-127)||(33994236-33994270)
chr7 (127-160)||(598289-598322)
chr7 (127-160)||(6490797-6490830)
chr7 (127-160)||(8842284-8842317)
chr7 (127-160)||(9778586-9778619)
chr7 (127-160)||(24339734-24339767)
chr7 (99-128)||(25822685-25822714)
chr7 (127-160)||(29812603-29812636)
chr7 (131-160)||(30813882-30813911)
chr7 (127-160)||(32287408-32287441)
chr7 (29-82)||(37742486-37742539)
chr7 (127-160)||(40287307-40287340)
chr7 (127-160)||(43027409-43027442)
chr7 (128-160)||(3991395-3991427)
chr7 (28-56)||(9778452-9778480)
chr7 (93-129)||(19213827-19213863)
chr7 (128-160)||(32093959-32093991)
[»] chr3 (60 HSPs)
chr3 (93-160)||(21256953-21257021)
chr3 (93-156)||(7928474-7928536)
chr3 (28-83)||(40052295-40052349)
chr3 (28-125)||(26508067-26508166)
chr3 (29-126)||(20503429-20503522)
chr3 (28-83)||(33359722-33359778)
chr3 (46-128)||(28917981-28918060)
chr3 (46-160)||(10335250-10335365)
chr3 (44-129)||(10954930-10955012)
chr3 (28-128)||(28812477-28812574)
chr3 (28-128)||(34910279-34910376)
chr3 (93-161)||(35994709-35994773)
chr3 (43-83)||(10318076-10318116)
chr3 (93-129)||(25775533-25775569)
chr3 (46-129)||(8587020-8587100)
chr3 (46-129)||(55401055-55401135)
chr3 (31-128)||(14209079-14209172)
chr3 (46-128)||(14829670-14829748)
chr3 (46-83)||(3865598-3865635)
chr3 (127-160)||(20503546-20503579)
chr3 (52-129)||(21479104-21479178)
chr3 (127-160)||(34185057-34185090)
chr3 (53-125)||(4987294-4987363)
chr3 (93-129)||(8593161-8593197)
chr3 (93-129)||(51206352-51206388)
chr3 (93-128)||(1509563-1509598)
chr3 (129-160)||(4990917-4990948)
chr3 (32-83)||(6525722-6525773)
chr3 (46-129)||(8383237-8383317)
chr3 (28-127)||(22774071-22774167)
chr3 (46-129)||(26492204-26492284)
chr3 (93-128)||(27505270-27505305)
chr3 (93-128)||(34185123-34185158)
chr3 (28-83)||(37077320-37077375)
chr3 (93-128)||(49651786-49651821)
chr3 (93-127)||(3865698-3865732)
chr3 (130-160)||(8789493-8789523)
chr3 (130-160)||(8842413-8842443)
chr3 (126-160)||(11610589-11610623)
chr3 (28-62)||(13845580-13845614)
chr3 (95-129)||(16000015-16000049)
chr3 (93-160)||(25948851-25948922)
chr3 (28-129)||(40993334-40993432)
chr3 (130-160)||(55401159-55401189)
chr3 (27-56)||(750706-750735)
chr3 (29-70)||(1852600-1852641)
chr3 (127-156)||(4987229-4987258)
chr3 (95-128)||(4990967-4991000)
chr3 (27-83)||(14979137-14979198)
chr3 (127-160)||(14979230-14979263)
chr3 (127-160)||(27505332-27505365)
chr3 (127-160)||(34910398-34910431)
chr3 (127-160)||(40052393-40052426)
chr3 (127-160)||(40993280-40993313)
chr3 (28-56)||(14027959-14027987)
chr3 (43-83)||(21720741-21720781)
chr3 (28-56)||(23870622-23870650)
chr3 (95-123)||(35312080-35312108)
chr3 (128-160)||(41961584-41961616)
chr3 (28-56)||(45451523-45451551)
[»] scaffold0103 (1 HSPs)
scaffold0103 (39-120)||(51784-51862)
[»] scaffold0025 (1 HSPs)
scaffold0025 (27-128)||(23729-23829)
[»] scaffold0223 (1 HSPs)
scaffold0223 (46-150)||(20152-20261)
[»] scaffold0306 (1 HSPs)
scaffold0306 (46-129)||(13380-13460)
[»] scaffold0152 (1 HSPs)
scaffold0152 (46-129)||(21867-21947)
[»] scaffold0053 (1 HSPs)
scaffold0053 (46-129)||(8778-8858)
[»] scaffold0004 (4 HSPs)
scaffold0004 (53-127)||(123612-123686)
scaffold0004 (129-160)||(92905-92936)
scaffold0004 (43-121)||(92784-92859)
scaffold0004 (95-128)||(83186-83219)
[»] scaffold0083 (1 HSPs)
scaffold0083 (95-129)||(45529-45563)
[»] scaffold0003 (2 HSPs)
scaffold0003 (46-128)||(241574-241653)
scaffold0003 (127-160)||(241686-241719)
[»] scaffold0652 (2 HSPs)
scaffold0652 (48-129)||(461-539)
scaffold0652 (127-160)||(407-440)
[»] scaffold0793 (2 HSPs)
scaffold0793 (128-160)||(4826-4858)
scaffold0793 (93-127)||(4884-4918)
[»] scaffold0475 (1 HSPs)
scaffold0475 (128-160)||(3390-3422)
[»] scaffold0021 (1 HSPs)
scaffold0021 (93-125)||(130506-130538)
[»] scaffold0171 (2 HSPs)
scaffold0171 (93-128)||(23444-23479)
scaffold0171 (28-56)||(23371-23399)
[»] scaffold0136 (1 HSPs)
scaffold0136 (93-128)||(3849-3884)
[»] scaffold0018 (1 HSPs)
scaffold0018 (46-127)||(178819-178898)
[»] scaffold0050 (1 HSPs)
scaffold0050 (95-129)||(70304-70338)
[»] scaffold0019 (1 HSPs)
scaffold0019 (28-128)||(71679-71784)
[»] scaffold0011 (1 HSPs)
scaffold0011 (93-127)||(17750-17784)
[»] scaffold0116 (1 HSPs)
scaffold0116 (27-56)||(9841-9870)
[»] scaffold0049 (2 HSPs)
scaffold0049 (27-56)||(63708-63737)
scaffold0049 (95-127)||(63799-63831)
[»] scaffold0009 (1 HSPs)
scaffold0009 (129-158)||(188483-188512)
[»] scaffold0007 (1 HSPs)
scaffold0007 (46-83)||(225310-225347)
[»] scaffold0086 (2 HSPs)
scaffold0086 (43-83)||(2900-2940)
scaffold0086 (131-159)||(3024-3052)
[»] scaffold0044 (1 HSPs)
scaffold0044 (93-125)||(53204-53236)


Alignment Details
Target: chr4 (Bit Score: 68; Significance: 2e-30; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 30 - 160
Target Start/End: Original strand, 30298910 - 30299043
Alignment:
Q  30 atgaagcacggatacggacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgt--- 126  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||         | ||||||||||||||||||||||||||||||||       
T  30298910 atgaagcacagatacggacacggacactgacacgccgacacagctaataatttgaaaaaaa--tgacataattcagtgtaattacaagtgtcggtgtcgt 30299007  T
Q  127 --cgggacacgcctaatccgaggagtgtccgtgctt 160  Q
      ||||||||| ||||||||||||||||||||||||    
T  30299008 gccgggacacgtctaatccgaggagtgtccgtgctt 30299043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 30 - 160
Target Start/End: Original strand, 30327778 - 30327911
Alignment:
Q  30 atgaagcacggatacggacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgt--- 126  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||         | ||||||||||||||||||||||||||||||||       
T  30327778 atgaagcacagatacggacacggacactgacacgccgacacagctaataatttgaaaaaaa--tgacataattcagtgtaattacaagtgtcggtgtcgt 30327875  T
Q  127 --cgggacacgcctaatccgaggagtgtccgtgctt 160  Q
      ||||||||| ||||||||||||||||||||||||    
T  30327876 gccgggacacgtctaatccgaggagtgtccgtgctt 30327911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 29 - 128
Target Start/End: Complemental strand, 12895211 - 12895116
Alignment:
Q  29 tatgaagcacggatacggacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtcg 128  Q
    |||||||||| ||||||||||||||||| ||||||| || |||||||||||||||         ||||||||||||  ||||||||||||||||||||||    
T  12895211 tatgaagcacagatacggacacggacac-gacacgccgaaacagctaataatttg---aaaaaatcacataattcaaagtaattacaagtgtcggtgtcg 12895116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 46 - 129
Target Start/End: Complemental strand, 23293065 - 23292985
Alignment:
Q  46 gacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    |||||||||| |||||||| ||||||||||||||||||         |||||||||||||| ||||||||||||||||||||||    
T  23293065 gacacggacaatgacacgccgacacagctaataatttgaaaaaa---tcacataattcagtataattacaagtgtcggtgtcgg 23292985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 129
Target Start/End: Original strand, 49430982 - 49431086
Alignment:
Q  28 ctatgaagcacggatacggacacg-----gacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcg 122  Q
    |||||||||||||| |||||||||     |||| |||||||| ||||||||||||||||||         ||||||||||||||||||||| ||||||||    
T  49430982 ctatgaagcacggacacggacacgactcggacagtgacacgccgacacagctaataatttgaaaaaaa--tcacataattcagtgtaattaaaagtgtcg 49431079  T
Q  123 gtgtcgg 129  Q
    |||||||    
T  49431080 gtgtcgg 49431086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 129
Target Start/End: Complemental strand, 12797438 - 12797337
Alignment:
Q  29 tatgaagcacggatacgga-----cacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcgg 123  Q
    |||||||||||||||||||     ||||||||||||||||| | || | |||||||||||         |||||||||||||||||||||||||||||||    
T  12797438 tatgaagcacggatacggatacgacacggacactgacacgccggcaaaactaataatttgaaaaa----tcacataattcagtgtaattacaagtgtcgg 12797343  T
Q  124 tgtcgg 129  Q
    ||||||    
T  12797342 tgtcgg 12797337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 129
Target Start/End: Original strand, 42640513 - 42640589
Alignment:
Q  53 acactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    |||| ||||||| ||||||||| ||||||||         |||||||||||||||||||||||||||||||||||||    
T  42640513 acacggacacgccgacacagctgataatttgaaaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgg 42640589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 129
Target Start/End: Original strand, 21945483 - 21945563
Alignment:
Q  46 gacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    ||||| |||||||||| || ||||||||||||||||||         | |||||||||||||||||||||||||||||||||||    
T  21945483 gacacagacactgacatgccgacacagctaataatttgaaaaaa---tgacataattcagtgtaattacaagtgtcggtgtcgg 21945563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 126
Target Start/End: Original strand, 29205408 - 29205501
Alignment:
Q  28 ctatgaagcacggatacggacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgt 126  Q
    |||||||||||||||||||||| |||||| |||||    |||| ||||||||||||         ||||||||||||||||||||||||||||||||||    
T  29205408 ctatgaagcacggatacggacatggacacggacacca--acacggctaataatttgaaaaaa---tcacataattcagtgtaattacaagtgtcggtgt 29205501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 160
Target Start/End: Complemental strand, 5775342 - 5775309
Alignment:
Q  127 cgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    ||||||||||||||||||||||||||||||||||    
T  5775342 cgggacacgcctaatccgaggagtgtccgtgctt 5775309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 129
Target Start/End: Original strand, 16073421 - 16073454
Alignment:
Q  96 cataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    ||||||||||||||||||||||||||||||||||    
T  16073421 cataattcagtgtaattacaagtgtcggtgtcgg 16073454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 160
Target Start/End: Complemental strand, 23292964 - 23292931
Alignment:
Q  127 cgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    ||||||||||||||||||||||||||||||||||    
T  23292964 cgggacacgcctaatccgaggagtgtccgtgctt 23292931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 160
Target Start/End: Original strand, 28470442 - 28470479
Alignment:
Q  123 gtgtcgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  28470442 gtgtcgggacatgcctaatccgaggagtgtccgtgctt 28470479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 160
Target Start/End: Complemental strand, 715582 - 715550
Alignment:
Q  128 gggacacgcctaatccgaggagtgtccgtgctt 160  Q
    |||||||||||||||||||||||||||||||||    
T  715582 gggacacgcctaatccgaggagtgtccgtgctt 715550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 160
Target Start/End: Complemental strand, 752908 - 752876
Alignment:
Q  128 gggacacgcctaatccgaggagtgtccgtgctt 160  Q
    |||||||||||||||||||||||||||||||||    
T  752908 gggacacgcctaatccgaggagtgtccgtgctt 752876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 129
Target Start/End: Complemental strand, 6879500 - 6879464
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    |||||||||| ||||||||||||||||||||||||||    
T  6879500 tcacataattaagtgtaattacaagtgtcggtgtcgg 6879464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 82
Target Start/End: Original strand, 24543941 - 24543997
Alignment:
Q  27 cctatgaagcacggatacggacacg-gacactgacacgctgacacagctaataattt 82  Q
    ||||||||||| ||||||||||||  ||||||||||||| |||||| ||||||||||    
T  24543941 cctatgaagcatggatacggacaccagacactgacacgccgacacaactaataattt 24543997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 160
Target Start/End: Original strand, 28084606 - 28084638
Alignment:
Q  128 gggacacgcctaatccgaggagtgtccgtgctt 160  Q
    |||||||||||||||||||||||||||||||||    
T  28084606 gggacacgcctaatccgaggagtgtccgtgctt 28084638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 129
Target Start/End: Complemental strand, 28964283 - 28964247
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    ||||||||||||||||||||||||||||| |||||||    
T  28964283 tcacataattcagtgtaattacaagtgtctgtgtcgg 28964247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 129
Target Start/End: Complemental strand, 54580058 - 54580022
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    ||||||||||||||||||||| |||||||||||||||    
T  54580058 tcacataattcagtgtaattataagtgtcggtgtcgg 54580022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 160
Target Start/End: Original strand, 4383449 - 4383480
Alignment:
Q  129 ggacacgcctaatccgaggagtgtccgtgctt 160  Q
    ||||||||||||||||||||||||||||||||    
T  4383449 ggacacgcctaatccgaggagtgtccgtgctt 4383480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 128
Target Start/End: Complemental strand, 11596387 - 11596352
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcg 128  Q
    |||||||||||||||||||||||||||| |||||||    
T  11596387 tcacataattcagtgtaattacaagtgtaggtgtcg 11596352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 160
Target Start/End: Complemental strand, 22440593 - 22440562
Alignment:
Q  129 ggacacgcctaatccgaggagtgtccgtgctt 160  Q
    ||||||||||||||||||||||||||||||||    
T  22440593 ggacacgcctaatccgaggagtgtccgtgctt 22440562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 127
Target Start/End: Complemental strand, 715642 - 715608
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtc 127  Q
    |||||||||||||||||||||||||||| ||||||    
T  715642 tcacataattcagtgtaattacaagtgttggtgtc 715608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 127
Target Start/End: Complemental strand, 752968 - 752934
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtc 127  Q
    |||||||||||||||||||||||||||| ||||||    
T  752968 tcacataattcagtgtaattacaagtgttggtgtc 752934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 160
Target Start/End: Complemental strand, 3064903 - 3064873
Alignment:
Q  130 gacacgcctaatccgaggagtgtccgtgctt 160  Q
    |||||||||||||||||||||||||||||||    
T  3064903 gacacgcctaatccgaggagtgtccgtgctt 3064873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 160
Target Start/End: Complemental strand, 11596336 - 11596302
Alignment:
Q  126 tcgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    ||||||||||||||||| |||||||||||||||||    
T  11596336 tcgggacacgcctaatctgaggagtgtccgtgctt 11596302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 160
Target Start/End: Complemental strand, 12895253 - 12895219
Alignment:
Q  126 tcgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    ||||||||||||||||||||||||||| |||||||    
T  12895253 tcgggacacgcctaatccgaggagtgttcgtgctt 12895219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 127
Target Start/End: Complemental strand, 28000773 - 28000743
Alignment:
Q  97 ataattcagtgtaattacaagtgtcggtgtc 127  Q
    |||||||||||||||||||||||||||||||    
T  28000773 ataattcagtgtaattacaagtgtcggtgtc 28000743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 159
Target Start/End: Original strand, 30094066 - 30094126
Alignment:
Q  106 tgtaattacaagtgtcggtgtcgg-------gacacgcctaatccgaggagtgtccgtgct 159  Q
    ||||||||||||||||||||||||       |||||||||||||||| |||||||||||||    
T  30094066 tgtaattacaagtgtcggtgtcggacaccgggacacgcctaatccgaagagtgtccgtgct 30094126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 126
Target Start/End: Complemental strand, 6485646 - 6485613
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgt 126  Q
    |||||||||| |||||||||||||||||||||||    
T  6485646 tcacataatttagtgtaattacaagtgtcggtgt 6485613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 56
Target Start/End: Complemental strand, 22234983 - 22234954
Alignment:
Q  27 cctatgaagcacggatacggacacggacac 56  Q
    ||||||||||||||||||||||||||||||    
T  22234983 cctatgaagcacggatacggacacggacac 22234954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 160
Target Start/End: Original strand, 36635411 - 36635444
Alignment:
Q  127 cgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    ||||||||||||||||||| ||||||||||||||    
T  36635411 cgggacacgcctaatccgaagagtgtccgtgctt 36635444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 160
Target Start/End: Original strand, 40784034 - 40784067
Alignment:
Q  127 cgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    |||||||| |||||||||||||||||||||||||    
T  40784034 cgggacacacctaatccgaggagtgtccgtgctt 40784067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 160
Target Start/End: Complemental strand, 53381568 - 53381535
Alignment:
Q  127 cgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    |||||||| |||||||||||||||||||||||||    
T  53381568 cgggacacacctaatccgaggagtgtccgtgctt 53381535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 128
Target Start/End: Complemental strand, 3947798 - 3947766
Alignment:
Q  96 cataattcagtgtaattacaagtgtcggtgtcg 128  Q
    |||||||||||||||||||||||||| ||||||    
T  3947798 cataattcagtgtaattacaagtgtcagtgtcg 3947766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 56
Target Start/End: Original strand, 4157102 - 4157130
Alignment:
Q  28 ctatgaagcacggatacggacacggacac 56  Q
    |||||||||||||||||||||||||||||    
T  4157102 ctatgaagcacggatacggacacggacac 4157130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 129
Target Start/End: Original strand, 4157173 - 4157209
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    |||||||||| |||| |||||||||||||||||||||    
T  4157173 tcacataatttagtgcaattacaagtgtcggtgtcgg 4157209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 129
Target Start/End: Original strand, 4157460 - 4157496
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    |||||||||| |||| |||||||||||||||||||||    
T  4157460 tcacataatttagtgcaattacaagtgtcggtgtcgg 4157496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 7970483 - 7970535
Alignment:
Q  28 ctatgaagcacggatacggacacggacactgacacgctgacacagctaataat 80  Q
    ||||||||||| ||| ||||||| |||||||||| |||||||| || ||||||    
T  7970483 ctatgaagcacagatccggacacagacactgacatgctgacaccgccaataat 7970535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 129
Target Start/End: Complemental strand, 8423753 - 8423717
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    ||||||||||||||||||||| || ||||||||||||    
T  8423753 tcacataattcagtgtaattataaatgtcggtgtcgg 8423717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 160
Target Start/End: Complemental strand, 18844467 - 18844428
Alignment:
Q  120 tcggtgtcgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    |||||||||| |||||||||||||||| |||||||||||||    
T  18844467 tcggtgtcgg-acacgcctaatccgagaagtgtccgtgctt 18844428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 56
Target Start/End: Original strand, 20633429 - 20633457
Alignment:
Q  28 ctatgaagcacggatacggacacggacac 56  Q
    |||||||||||||||||||||||||||||    
T  20633429 ctatgaagcacggatacggacacggacac 20633457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 160
Target Start/End: Complemental strand, 28964225 - 28964193
Alignment:
Q  128 gggacacgcctaatccgaggagtgtccgtgctt 160  Q
    ||||||||||||||||||||||||||| |||||    
T  28964225 gggacacgcctaatccgaggagtgtccatgctt 28964193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 160
Target Start/End: Original strand, 29205550 - 29205582
Alignment:
Q  128 gggacacgcctaatccgaggagtgtccgtgctt 160  Q
    ||||||||||||||||||||||||| |||||||    
T  29205550 gggacacgcctaatccgaggagtgttcgtgctt 29205582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 35723484 - 35723427
Alignment:
Q  30 atgaagcacggatacggacacg----gacactgacacgctgacacagctaataatttg 83  Q
    ||||||||| ||||||||||||    ||||||||||||| ||||| ||||||||||||    
T  35723484 atgaagcaccgatacggacacgacatgacactgacacgccgacaccgctaataatttg 35723427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 2e-27; HSPs: 58)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 27 - 129
Target Start/End: Original strand, 37558938 - 37559037
Alignment:
Q  27 cctatgaagcacggatacggacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgt 126  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||         |||||||||||| |||||||||||||||||||||    
T  37558938 cctatgaagcacggatacggacacggacactgacacgccgacacagctaataatttg---taaaaatcacataattcaatgtaattacaagtgtcggtgt 37559034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 46 - 160
Target Start/End: Complemental strand, 19536477 - 19536366
Alignment:
Q  46 gacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtcgggacacgcctaatccga 145  Q
    |||||||||| |||||||| |||||| |||||||||||         ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  19536477 gacacggacaatgacacgccgacacaactaataatttgaaaaaaa--tcacataattcagtgtaattacaagtgtcggtgtc-ggacacgcctaatccga 19536381  T
Q  146 ggagtgtccgtgctt 160  Q
    ||||||||| |||||    
T  19536380 ggagtgtccatgctt 19536366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 97 - 157
Target Start/End: Complemental strand, 34691836 - 34691777
Alignment:
Q  97 ataattcagtgtaattacaagtgtcggtgtcgggacacgcctaatccgaggagtgtccgtg 157  Q
    ||||||||||||||||| | ||||||||||||| |||||||||||||||||||||||||||    
T  34691836 ataattcagtgtaattatatgtgtcggtgtcgg-acacgcctaatccgaggagtgtccgtg 34691777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 97 - 157
Target Start/End: Complemental strand, 34714248 - 34714189
Alignment:
Q  97 ataattcagtgtaattacaagtgtcggtgtcgggacacgcctaatccgaggagtgtccgtg 157  Q
    ||||||||||||||||| | ||||||||||||| |||||||||||||||||||||||||||    
T  34714248 ataattcagtgtaattatatgtgtcggtgtcgg-acacgcctaatccgaggagtgtccgtg 34714189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 93 - 160
Target Start/End: Complemental strand, 18256015 - 18255949
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    |||||||||| | |||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||    
T  18256015 tcacataatttaatgtaattagaagtgtcggtgtcgg-acacgcctaatccaaggagtgtccgtgctt 18255949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 46 - 160
Target Start/End: Complemental strand, 20539753 - 20539637
Alignment:
Q  46 gacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgt-----cgggacacgcctaa 140  Q
    ||||||||||||||||||  ||||||||||||||||||         ||| |||||| |||||||||||||||||||||||     || ||||||||| |    
T  20539753 gacacggacactgacacgtcgacacagctaataatttg---aaaaaatcatataatttagtgtaattacaagtgtcggtgtcgtggcgagacacgcctga 20539657  T
Q  141 tccgaggagtgtccgtgctt 160  Q
    ||||||||||||||||||||    
T  20539656 tccgaggagtgtccgtgctt 20539637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 26 - 127
Target Start/End: Complemental strand, 18841117 - 18841014
Alignment:
Q  26 ccctatgaagcacggatacggacacg-----gacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgt 120  Q
    |||||||||||||| |||||||||||     |||||||||||||||||||| |||||||||||         | |||||||| |||||||||||||||||    
T  18841117 ccctatgaagcacgtatacggacacgacatggacactgacacgctgacacaactaataatttg---aaaaaattacataattaagtgtaattacaagtgt 18841021  T
Q  121 cggtgtc 127  Q
    |||||||    
T  18841020 cggtgtc 18841014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 129
Target Start/End: Complemental strand, 30404952 - 30404849
Alignment:
Q  28 ctatgaagcacggatacggaca-----cggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcg 122  Q
    ||||||||||||||||||||||     ||||||||||||||| ||||| | ||||||||||         ||||||||||||||||||||||||||||||    
T  30404952 ctatgaagcacggatacggacatgacacggacactgacacgccgacacggttaataatttgaaaaaa---tcacataattcagtgtaattacaagtgtcg 30404856  T
Q  123 gtgtcgg 129  Q
    | |||||    
T  30404855 gcgtcgg 30404849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 160
Target Start/End: Original strand, 39323226 - 39323352
Alignment:
Q  28 ctatgaagcacggatacggacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtc 127  Q
    |||| ||||||| ||||||||||||||||||| |||  ||||| ||||||||||||         | |||||||||||||||||||||||||||     |    
T  39323226 ctataaagcacgaatacggacacggacactgaaacgtcgacaccgctaataatttg---acaaaattacataattcagtgtaattacaagtgtc---acc 39323319  T
Q  128 gggacacgcctaatccgaggagtgtccgtgctt 160  Q
     ||||| |||||||| |||||||||||||||||    
T  39323320 tggacaggcctaatctgaggagtgtccgtgctt 39323352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 128
Target Start/End: Original strand, 37419704 - 37419802
Alignment:
Q  28 ctatgaagcacggatacggaca-cggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgt 126  Q
    |||||||||||||||||||||| ||||||||||||||| ||||  || |||||||||         ||||| ||||||||||||||||||||| ||||||    
T  37419704 ctatgaagcacggatacggacaccggacactgacacgccgacatggcaaataatttg---aaaaaatcacaaaattcagtgtaattacaagtgccggtgt 37419800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 129
Target Start/End: Complemental strand, 2438754 - 2438718
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    |||||||||||||||||||||||||||||||||||||    
T  2438754 tcacataattcagtgtaattacaagtgtcggtgtcgg 2438718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 128
Target Start/End: Original strand, 18421987 - 18422022
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcg 128  Q
    ||||||||||||||||||||||||||||||||||||    
T  18421987 tcacataattcagtgtaattacaagtgtcggtgtcg 18422022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 160
Target Start/End: Complemental strand, 34221530 - 34221468
Alignment:
Q  95 acataattcagtgtaattacaagtgtcggtgtcgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    |||||||||  || |||||||||||||||   |||||||||||||||||||||||| |||||||||    
T  34221530 acataattctatgcaattacaagtgtcgg---cgggacacgcctaatccgaggagtttccgtgctt 34221468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 160
Target Start/End: Complemental strand, 2438697 - 2438664
Alignment:
Q  127 cgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    ||||||||||||||||||||||||||||||||||    
T  2438697 cgggacacgcctaatccgaggagtgtccgtgctt 2438664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 127
Target Start/End: Complemental strand, 11223942 - 11223864
Alignment:
Q  46 gacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtc 127  Q
    |||| |||||| ||||||||||||||||||||| ||||         | |||||||||||||||||||||||||||||||||    
T  11223942 gacatggacacagacacgctgacacagctaatattttgaaaaaa---taacataattcagtgtaattacaagtgtcggtgtc 11223864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 127
Target Start/End: Complemental strand, 14996303 - 14996224
Alignment:
Q  46 gacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtc 127  Q
    |||||||||||||||| || ||||||||||||||||||         ||| |||||| ||||||||||||||||||||||||    
T  14996303 gacacggacactgacaagccgacacagctaataatttg--aaaaaaatcatataatttagtgtaattacaagtgtcggtgtc 14996224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 121
Target Start/End: Complemental strand, 21374780 - 21374706
Alignment:
Q  44 cggacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtc 121  Q
    |||||||||||||| |||||| ||||||||||||||||||         | |||||||||||||||||||||||||||    
T  21374780 cggacacggacactaacacgccgacacagctaataatttg---aaaaaattacataattcagtgtaattacaagtgtc 21374706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 129
Target Start/End: Original strand, 21624294 - 21624327
Alignment:
Q  96 cataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    ||||||||||||||||||||||||||||||||||    
T  21624294 cataattcagtgtaattacaagtgtcggtgtcgg 21624327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 160
Target Start/End: Original strand, 37419835 - 37419868
Alignment:
Q  127 cgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    ||||||||||||||||||||||||||||||||||    
T  37419835 cgggacacgcctaatccgaggagtgtccgtgctt 37419868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 129
Target Start/End: Original strand, 5040758 - 5040794
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    |||||||||||| ||||||||||||||||||||||||    
T  5040758 tcacataattcaatgtaattacaagtgtcggtgtcgg 5040794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 82
Target Start/End: Original strand, 6940235 - 6940271
Alignment:
Q  46 gacacggacactgacacgctgacacagctaataattt 82  Q
    ||||||||||||||||||| |||||||||||||||||    
T  6940235 gacacggacactgacacgccgacacagctaataattt 6940271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 160
Target Start/End: Original strand, 26769604 - 26769636
Alignment:
Q  128 gggacacgcctaatccgaggagtgtccgtgctt 160  Q
    |||||||||||||||||||||||||||||||||    
T  26769604 gggacacgcctaatccgaggagtgtccgtgctt 26769636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 129
Target Start/End: Original strand, 44635522 - 44635558
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    |||| ||||||||||||||||||||||||||||||||    
T  44635522 tcacgtaattcagtgtaattacaagtgtcggtgtcgg 44635558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 128
Target Start/End: Original strand, 974771 - 974806
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcg 128  Q
    |||||| |||||||||||||||||||||||||||||    
T  974771 tcacattattcagtgtaattacaagtgtcggtgtcg 974806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 128
Target Start/End: Original strand, 15657888 - 15657923
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcg 128  Q
    |||||||||||||||||||||||| |||||||||||    
T  15657888 tcacataattcagtgtaattacaaatgtcggtgtcg 15657923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 129
Target Start/End: Original strand, 15972853 - 15972933
Alignment:
Q  46 gacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    ||||||||||||||||||| ||||||  ||||||||||         | ||| |||||||||||||||||||||||||||||||    
T  15972853 gacacggacactgacacgccgacacaattaataatttgaaaaaa---ttacacaattcagtgtaattacaagtgtcggtgtcgg 15972933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 83
Target Start/End: Complemental strand, 19580378 - 19580323
Alignment:
Q  28 ctatgaagcacggatacggacacggacactgacacgctgacacagctaataatttg 83  Q
    |||||||| ||||||||||||||||||||||| || | | ||||| ||||||||||    
T  19580378 ctatgaagtacggatacggacacggacactgatacaccgtcacagttaataatttg 19580323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 128
Target Start/End: Complemental strand, 23058477 - 23058442
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcg 128  Q
    ||||||||| ||||||||||||||||||||||||||    
T  23058477 tcacataatccagtgtaattacaagtgtcggtgtcg 23058442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 82
Target Start/End: Original strand, 24894370 - 24894405
Alignment:
Q  47 acacggacactgacacgctgacacagctaataattt 82  Q
    |||||||||||||||||| |||||||||||||||||    
T  24894370 acacggacactgacacgccgacacagctaataattt 24894405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 57
Target Start/End: Original strand, 27084228 - 27084259
Alignment:
Q  26 ccctatgaagcacggatacggacacggacact 57  Q
    ||||||||||||||||||||||||||||||||    
T  27084228 ccctatgaagcacggatacggacacggacact 27084259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 128
Target Start/End: Complemental strand, 30717565 - 30717530
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcg 128  Q
    |||||||||||||||||||||||||||||| |||||    
T  30717565 tcacataattcagtgtaattacaagtgtcgatgtcg 30717530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 128
Target Start/End: Original strand, 33153448 - 33153483
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcg 128  Q
    ||||||||||||||||||||||||||||| ||||||    
T  33153448 tcacataattcagtgtaattacaagtgtccgtgtcg 33153483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 160
Target Start/End: Original strand, 17776678 - 17776712
Alignment:
Q  126 tcgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    |||||||| ||||||||||||||||||||||||||    
T  17776678 tcgggacaggcctaatccgaggagtgtccgtgctt 17776712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 157
Target Start/End: Complemental strand, 23354619 - 23354589
Alignment:
Q  127 cgggacacgcctaatccgaggagtgtccgtg 157  Q
    |||||||||||||||||||||||||||||||    
T  23354619 cgggacacgcctaatccgaggagtgtccgtg 23354589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 160
Target Start/End: Complemental strand, 11223831 - 11223798
Alignment:
Q  127 cgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    |||||||||||||||| |||||||||||||||||    
T  11223831 cgggacacgcctaatctgaggagtgtccgtgctt 11223798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 128
Target Start/End: Complemental strand, 12668456 - 12668423
Alignment:
Q  95 acataattcagtgtaattacaagtgtcggtgtcg 128  Q
    ||||||||||||||||||| ||||||||||||||    
T  12668456 acataattcagtgtaattataagtgtcggtgtcg 12668423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 83
Target Start/End: Complemental strand, 12941014 - 12940977
Alignment:
Q  46 gacacggacactgacacgctgacacagctaataatttg 83  Q
    |||||||||||||||||| ||||||| |||||||||||    
T  12941014 gacacggacactgacacgttgacacaactaataatttg 12940977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 160
Target Start/End: Complemental strand, 18840991 - 18840958
Alignment:
Q  127 cgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    |||||||| |||||||||||||||||||||||||    
T  18840991 cgggacacacctaatccgaggagtgtccgtgctt 18840958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 160
Target Start/End: Original strand, 19942346 - 19942379
Alignment:
Q  127 cgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    |||||||||||||||||||||||||||| |||||    
T  19942346 cgggacacgcctaatccgaggagtgtccatgctt 19942379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 160
Target Start/End: Complemental strand, 23058422 - 23058389
Alignment:
Q  127 cgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    |||||||||||||||||||| |||||||||||||    
T  23058422 cgggacacgcctaatccgagaagtgtccgtgctt 23058389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 160
Target Start/End: Complemental strand, 23354962 - 23354929
Alignment:
Q  127 cgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    |||||||||||||||||||||||||||| |||||    
T  23354962 cgggacacgcctaatccgaggagtgtccttgctt 23354929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 56
Target Start/End: Original strand, 26769460 - 26769489
Alignment:
Q  27 cctatgaagcacggatacggacacggacac 56  Q
    ||||||||||||||||||||||||||||||    
T  26769460 cctatgaagcacggatacggacacggacac 26769489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 56
Target Start/End: Complemental strand, 27447117 - 27447088
Alignment:
Q  27 cctatgaagcacggatacggacacggacac 56  Q
    ||||||||||||||||||||||||||||||    
T  27447117 cctatgaagcacggatacggacacggacac 27447088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 128
Target Start/End: Original strand, 33884077 - 33884110
Alignment:
Q  95 acataattcagtgtaattacaagtgtcggtgtcg 128  Q
    |||| |||||||||||||||||||||||||||||    
T  33884077 acatgattcagtgtaattacaagtgtcggtgtcg 33884110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 128
Target Start/End: Complemental strand, 36756377 - 36756344
Alignment:
Q  95 acataattcagtgtaattacaagtgtcggtgtcg 128  Q
    ||||||||||||||||||| ||||||||||||||    
T  36756377 acataattcagtgtaattataagtgtcggtgtcg 36756344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 160
Target Start/End: Complemental strand, 38117137 - 38117104
Alignment:
Q  127 cgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    ||||||||||||||||||||| ||||||||||||    
T  38117137 cgggacacgcctaatccgaggggtgtccgtgctt 38117104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 41843403 - 41843444
Alignment:
Q  28 ctatgaagcacggatacggacacggacactgacacgctgaca 69  Q
    |||||||||||||||| | |||||||||||||||||| ||||    
T  41843403 ctatgaagcacggatatgaacacggacactgacacgccgaca 41843444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 57
Target Start/End: Complemental strand, 44770235 - 44770206
Alignment:
Q  28 ctatgaagcacggatacggacacggacact 57  Q
    ||||||||||||||||||||||||||||||    
T  44770235 ctatgaagcacggatacggacacggacact 44770206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 160
Target Start/End: Complemental strand, 3444863 - 3444831
Alignment:
Q  128 gggacacgcctaatccgaggagtgtccgtgctt 160  Q
    |||||| ||||||||||||||||||||||||||    
T  3444863 gggacatgcctaatccgaggagtgtccgtgctt 3444831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 129
Target Start/End: Original strand, 5367216 - 5367252
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    ||||||||||||||||||||| | |||||||||||||    
T  5367216 tcacataattcagtgtaattatatgtgtcggtgtcgg 5367252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 129
Target Start/End: Complemental strand, 20242762 - 20242726
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    ||||||||||||||||||||| | |||||||||||||    
T  20242762 tcacataattcagtgtaattatatgtgtcggtgtcgg 20242726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 129
Target Start/End: Original strand, 20473350 - 20473382
Alignment:
Q  97 ataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    |||||||||||||||||||||||||| ||||||    
T  20473350 ataattcagtgtaattacaagtgtcgatgtcgg 20473382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 56
Target Start/End: Complemental strand, 21374809 - 21374781
Alignment:
Q  28 ctatgaagcacggatacggacacggacac 56  Q
    |||||||||||||||||||||||||||||    
T  21374809 ctatgaagcacggatacggacacggacac 21374781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 82
Target Start/End: Original strand, 21624246 - 21624282
Alignment:
Q  46 gacacggacactgacacgctgacacagctaataattt 82  Q
    ||||| ||||||||||||| |||||||||||||||||    
T  21624246 gacacagacactgacacgccgacacagctaataattt 21624282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 83
Target Start/End: Original strand, 27460011 - 27460043
Alignment:
Q  51 ggacactgacacgctgacacagctaataatttg 83  Q
    |||||||||||||| ||||||||||||||||||    
T  27460011 ggacactgacacgccgacacagctaataatttg 27460043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 129
Target Start/End: Original strand, 27460065 - 27460097
Alignment:
Q  97 ataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    ||||||||||||||||||||| |||||||||||    
T  27460065 ataattcagtgtaattacaagggtcggtgtcgg 27460097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 129
Target Start/End: Original strand, 28596493 - 28596529
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    |||||||| |||||||||||| |||||||||||||||    
T  28596493 tcacataagtcagtgtaattataagtgtcggtgtcgg 28596529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 160
Target Start/End: Complemental strand, 42511359 - 42511327
Alignment:
Q  128 gggacacgcctaatccgaggagtgtccgtgctt 160  Q
    |||||||| ||||||||||||||||||||||||    
T  42511359 gggacacggctaatccgaggagtgtccgtgctt 42511327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 1e-24; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 28 - 160
Target Start/End: Original strand, 14674231 - 14674363
Alignment:
Q  28 ctatgaagcacggatacggacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcgg---t 124  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||         |||||||||| ||||||||||||||||||||        
T  14674231 ctatgaagcacggatacagacacggacactgacacgccgacacagctaataatttg---aaaaaatcacataatttagtgtaattacaagtgtcggacag 14674327  T
Q  125 gtcgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    | || ||||| |||||||||||||||||| ||||||    
T  14674328 gccgagacacacctaatccgaggagtgtctgtgctt 14674363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 93 - 160
Target Start/End: Original strand, 10298593 - 10298664
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcg----ggacacgcctaatccgaggagtgtccgtgctt 160  Q
    ||||||||| || |||||||||||||||||||||||    ||||||||||||||||||||||||||||||||    
T  10298593 tcacataatacaatgtaattacaagtgtcggtgtcgtatcggacacgcctaatccgaggagtgtccgtgctt 10298664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 43 - 128
Target Start/End: Original strand, 39698518 - 39698600
Alignment:
Q  43 acggacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtcg 128  Q
    ||||| |||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||| ||||||    
T  39698518 acggatacggacactgacacgctgacacagctaataatttg---aaaaaatcacataattcagtgtaattacaagtgtcagtgtcg 39698600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 46 - 129
Target Start/End: Complemental strand, 21191135 - 21191055
Alignment:
Q  46 gacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    |||||||||||||||| || ||||||||||||||||||         |||||||||||||||||||||||||||||||||||||    
T  21191135 gacacggacactgacatgccgacacagctaataatttgaaaaaa---tcacataattcagtgtaattacaagtgtcggtgtcgg 21191055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 160
Target Start/End: Original strand, 8419985 - 8420117
Alignment:
Q  31 tgaagcacggatacggacacggacac-------tgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcgg 123  Q
    ||||||||||||||||||||||||||       |||||||| |||| |||||||||||||         | |||||||||| ||||||||||||||||||    
T  8419985 tgaagcacggatacggacacggacaccggacaatgacacgccgacatagctaataatttgaaaaaa---taacataattcaatgtaattacaagtgtcgg 8420081  T
Q  124 tgtcgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    |||| |||| |||||||| |||||||| |||||||||    
T  8420082 tgtc-ggacgcgcctaattcgaggagtatccgtgctt 8420117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 28 - 125
Target Start/End: Original strand, 43001762 - 43001856
Alignment:
Q  28 ctatgaagcacggatacggacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtg 125  Q
    |||||||||||||||||||||||||||||||||| |  ||||| ||||||||||||         | |||||||||||||||||||||||||| ||||    
T  43001762 ctatgaagcacggatacggacacggacactgacatgtcgacactgctaataatttg---aaaaaattacataattcagtgtaattacaagtgttggtg 43001856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 117 - 160
Target Start/End: Complemental strand, 22423812 - 22423769
Alignment:
Q  117 gtgtcggtgtcgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    
T  22423812 gtgtcggtgtctggacacgcctaatccgaggagtgtccgtgctt 22423769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 129
Target Start/End: Original strand, 6247646 - 6247682
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    |||||||||||||||||||||||||||||||||||||    
T  6247646 tcacataattcagtgtaattacaagtgtcggtgtcgg 6247682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 129
Target Start/End: Original strand, 15884012 - 15884048
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    |||||||||||||||||||||||||||||||||||||    
T  15884012 tcacataattcagtgtaattacaagtgtcggtgtcgg 15884048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 129
Target Start/End: Original strand, 15382457 - 15382539
Alignment:
Q  46 gacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    |||||||||| |||||||| ||||||||||||||||||         ||| |||||||||| ||||||||||||||||||||||    
T  15382457 gacacggacaatgacacgccgacacagctaataatttg-aaaaaaaatcatataattcagtataattacaagtgtcggtgtcgg 15382539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 128
Target Start/End: Original strand, 21522730 - 21522809
Alignment:
Q  46 gacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtcg 128  Q
    ||||||||||||||||||| |||||||||||||||||          | |||||||||||||||||||||| |||||||||||    
T  21522730 gacacggacactgacacgccgacacagctaataattt---taaaaaataacataattcagtgtaattacaattgtcggtgtcg 21522809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 128
Target Start/End: Original strand, 21533296 - 21533375
Alignment:
Q  46 gacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtcg 128  Q
    ||||||||||||||||||| |||||||||||||||||          | |||||||||||||||||||||| |||||||||||    
T  21533296 gacacggacactgacacgccgacacagctaataattt---taaaaaataacataattcagtgtaattacaattgtcggtgtcg 21533375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 127
Target Start/End: Complemental strand, 21351940 - 21351906
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtc 127  Q
    |||||||||||||||||||||||||||||||||||    
T  21351940 tcacataattcagtgtaattacaagtgtcggtgtc 21351906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 160
Target Start/End: Original strand, 35017123 - 35017157
Alignment:
Q  126 tcgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    |||||||||||||||||||||||||||||||||||    
T  35017123 tcgggacacgcctaatccgaggagtgtccgtgctt 35017157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 160
Target Start/End: Original strand, 14873603 - 14873636
Alignment:
Q  127 cgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    ||||||||||||||||||||||||||||||||||    
T  14873603 cgggacacgcctaatccgaggagtgtccgtgctt 14873636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 160
Target Start/End: Original strand, 17123128 - 17123161
Alignment:
Q  127 cgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    ||||||||||||||||||||||||||||||||||    
T  17123128 cgggacacgcctaatccgaggagtgtccgtgctt 17123161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 19579682 - 19579760
Alignment:
Q  47 acacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtcg 128  Q
    ||||||||||||| |||| ||||||||||||||||||         |||||||||| |||| ||||||||||||||||||||    
T  19579682 acacggacactgatacgccgacacagctaataatttg---agaaaatcacataatttagtgcaattacaagtgtcggtgtcg 19579760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 160
Target Start/End: Complemental strand, 21191034 - 21191001
Alignment:
Q  127 cgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    ||||||||||||||||||||||||||||||||||    
T  21191034 cgggacacgcctaatccgaggagtgtccgtgctt 21191001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 128
Target Start/End: Original strand, 21542056 - 21542089
Alignment:
Q  95 acataattcagtgtaattacaagtgtcggtgtcg 128  Q
    ||||||||||||||||||||||||||||||||||    
T  21542056 acataattcagtgtaattacaagtgtcggtgtcg 21542089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 83
Target Start/End: Original strand, 22013394 - 22013431
Alignment:
Q  46 gacacggacactgacacgctgacacagctaataatttg 83  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  22013394 gacacggacactgacacgccgacacagctaataatttg 22013431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 160
Target Start/End: Original strand, 4105341 - 4105373
Alignment:
Q  128 gggacacgcctaatccgaggagtgtccgtgctt 160  Q
    |||||||||||||||||||||||||||||||||    
T  4105341 gggacacgcctaatccgaggagtgtccgtgctt 4105373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 83
Target Start/End: Original strand, 6035444 - 6035500
Alignment:
Q  27 cctatgaagcacggatacggacacggacactgacacgctgacacagctaataatttg 83  Q
    |||||||||||||||||  ||||  ||||||||||||| ||||| ||||||||||||    
T  6035444 cctatgaagcacggatatagacaaagacactgacacgccgacaccgctaataatttg 6035500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 160
Target Start/End: Complemental strand, 21576722 - 21576690
Alignment:
Q  128 gggacacgcctaatccgaggagtgtccgtgctt 160  Q
    |||||||||||||||||||||||||||||||||    
T  21576722 gggacacgcctaatccgaggagtgtccgtgctt 21576690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 129
Target Start/End: Complemental strand, 21576780 - 21576744
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    |||||||||||||||||||||||||||||| ||||||    
T  21576780 tcacataattcagtgtaattacaagtgtcgatgtcgg 21576744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 129
Target Start/End: Original strand, 33178049 - 33178085
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    |||||||||| ||||||||||||||||||||||||||    
T  33178049 tcacataatttagtgtaattacaagtgtcggtgtcgg 33178085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 160
Target Start/End: Complemental strand, 39268575 - 39268543
Alignment:
Q  128 gggacacgcctaatccgaggagtgtccgtgctt 160  Q
    |||||||||||||||||||||||||||||||||    
T  39268575 gggacacgcctaatccgaggagtgtccgtgctt 39268543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 124
Target Start/End: Complemental strand, 7218302 - 7218271
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggt 124  Q
    ||||||||||||||||||||||||||||||||    
T  7218302 tcacataattcagtgtaattacaagtgtcggt 7218271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 128
Target Start/End: Complemental strand, 13287434 - 13287399
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcg 128  Q
    |||||||||||||||||| |||||||||||||||||    
T  13287434 tcacataattcagtgtaactacaagtgtcggtgtcg 13287399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 160
Target Start/End: Original strand, 43001888 - 43001919
Alignment:
Q  129 ggacacgcctaatccgaggagtgtccgtgctt 160  Q
    ||||||||||||||||||||||||||||||||    
T  43001888 ggacacgcctaatccgaggagtgtccgtgctt 43001919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 128
Target Start/End: Original strand, 3966467 - 3966562
Alignment:
Q  31 tgaagcacggatacggacac-ggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtcg 128  Q
    ||||||||||| |||||||| ||||||||||| || ||||| ||||||||||||         ||||| ||||||||||||||| | ||||||||||||    
T  3966467 tgaagcacggacacggacactggacactgacatgccgacaccgctaataatttg---agaaaatcacacaattcagtgtaattatatgtgtcggtgtcg 3966562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 157
Target Start/End: Original strand, 17088372 - 17088402
Alignment:
Q  127 cgggacacgcctaatccgaggagtgtccgtg 157  Q
    |||||||||||||||||||||||||||||||    
T  17088372 cgggacacgcctaatccgaggagtgtccgtg 17088402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 161
Target Start/End: Complemental strand, 21194101 - 21194067
Alignment:
Q  127 cgggacacgcctaatccgaggagtgtccgtgcttt 161  Q
    |||| ||||||||||||||||||||||||||||||    
T  21194101 cggggcacgcctaatccgaggagtgtccgtgcttt 21194067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 129
Target Start/End: Complemental strand, 24906334 - 24906300
Alignment:
Q  95 acataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    |||||||||||||||||||||||||||||| ||||    
T  24906334 acataattcagtgtaattacaagtgtcggtatcgg 24906300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 160
Target Start/End: Original strand, 39698636 - 39698666
Alignment:
Q  130 gacacgcctaatccgaggagtgtccgtgctt 160  Q
    |||||||||||||||||||||||||||||||    
T  39698636 gacacgcctaatccgaggagtgtccgtgctt 39698666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 127
Target Start/End: Original strand, 42893384 - 42893418
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtc 127  Q
    ||||||||| |||||||||||||||||||||||||    
T  42893384 tcacataatccagtgtaattacaagtgtcggtgtc 42893418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 129
Target Start/End: Original strand, 43564853 - 43564941
Alignment:
Q  36 cacggatacggacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    |||||||||||||||| |||||||||||| |||||| |  ||||||||         |||||||||| |||||||||| |||||||||||||||    
T  43564853 cacggatacggacacgaacactgacacgccgacacatc--ataatttggaaaaa---tcacataatttagtgtaattataagtgtcggtgtcgg 43564941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 56
Target Start/End: Original strand, 15382420 - 15382449
Alignment:
Q  27 cctatgaagcacggatacggacacggacac 56  Q
    ||||||||||||||||||||||||||||||    
T  15382420 cctatgaagcacggatacggacacggacac 15382449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 83
Target Start/End: Complemental strand, 19552622 - 19552585
Alignment:
Q  46 gacacggacactgacacgctgacacagctaataatttg 83  Q
    ||||||||||||||||||| ||||||| ||||||||||    
T  19552622 gacacggacactgacacgccgacacagttaataatttg 19552585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 160
Target Start/End: Complemental strand, 19820366 - 19820333
Alignment:
Q  127 cgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    |||||||||||||||| |||||||||||||||||    
T  19820366 cgggacacgcctaatcagaggagtgtccgtgctt 19820333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 83
Target Start/End: Complemental strand, 36642841 - 36642804
Alignment:
Q  46 gacacggacactgacacgctgacacagctaataatttg 83  Q
    ||||||||||||||||||| ||||||| ||||||||||    
T  36642841 gacacggacactgacacgccgacacagttaataatttg 36642804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 128
Target Start/End: Original strand, 41633761 - 41633794
Alignment:
Q  95 acataattcagtgtaattacaagtgtcggtgtcg 128  Q
    |||||||||||||||||||||| |||||||||||    
T  41633761 acataattcagtgtaattacaaatgtcggtgtcg 41633794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 160
Target Start/End: Original strand, 43564962 - 43564995
Alignment:
Q  127 cgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    |||||||||||||||||||| |||||||||||||    
T  43564962 cgggacacgcctaatccgagaagtgtccgtgctt 43564995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 160
Target Start/End: Original strand, 3966596 - 3966628
Alignment:
Q  128 gggacacgcctaatccgaggagtgtccgtgctt 160  Q
    |||||||| ||||||||||||||||||||||||    
T  3966596 gggacacgtctaatccgaggagtgtccgtgctt 3966628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 82
Target Start/End: Original strand, 6770523 - 6770559
Alignment:
Q  46 gacacggacactgacacgctgacacagctaataattt 82  Q
    ||||||||||||||||| |||||||| ||||||||||    
T  6770523 gacacggacactgacacactgacacaactaataattt 6770559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 82
Target Start/End: Complemental strand, 15410527 - 15410491
Alignment:
Q  46 gacacggacactgacacgctgacacagctaataattt 82  Q
    ||||||||||||||||||| ||||| |||||||||||    
T  15410527 gacacggacactgacacgccgacaccgctaataattt 15410491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 160
Target Start/End: Complemental strand, 23015961 - 23015929
Alignment:
Q  128 gggacacgcctaatccgaggagtgtccgtgctt 160  Q
    |||||||||||||||||||||||||||| ||||    
T  23015961 gggacacgcctaatccgaggagtgtccgagctt 23015929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 129
Target Start/End: Complemental strand, 28588709 - 28588673
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    ||||||||||||||||||||| | |||||||||||||    
T  28588709 tcacataattcagtgtaattataggtgtcggtgtcgg 28588673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 58
Target Start/End: Original strand, 41995417 - 41995445
Alignment:
Q  30 atgaagcacggatacggacacggacactg 58  Q
    |||||||||||||||||||||||||||||    
T  41995417 atgaagcacggatacggacacggacactg 41995445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 6e-24; HSPs: 56)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 29 - 129
Target Start/End: Original strand, 28152062 - 28152158
Alignment:
Q  29 tatgaagcacggatacggacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtcg 128  Q
    ||||||||||||||| |||||||||||||||||||| |||| |||||||||||||         ||||||||||||||||||||||||||||||||||||    
T  28152062 tatgaagcacggatatggacacggacactgacacgccgacaaagctaataatttg----aaaaatcacataattcagtgtaattacaagtgtcggtgtcg 28152157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 26 - 129
Target Start/End: Complemental strand, 17841688 - 17841588
Alignment:
Q  26 ccctatgaagcacggatacggacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtg 125  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||         |||||||||| |||||||||||||||| |||||    
T  17841688 ccctatgaagcactgatacggacacggacactgacacgccgacacagctaataatttg---aaaaaatcacataatttagtgtaattacaagtgacggtg 17841592  T
Q  126 tcgg 129  Q
    ||||    
T  17841591 tcgg 17841588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 46 - 160
Target Start/End: Complemental strand, 426593 - 426483
Alignment:
Q  46 gacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtcgggacacgcctaatccga 145  Q
    ||||||||||||||||||| ||||||| ||||||||||         |||||||||| | |||||||||||||||||||||| |||||||||||||| ||    
T  426593 gacacggacactgacacgccgacacagttaataatttgaaaaaa---tcacataattaaatgtaattacaagtgtcggtgtc-ggacacgcctaatctga 426498  T
Q  146 ggagtgtccgtgctt 160  Q
    |||||||||||||||    
T  426497 ggagtgtccgtgctt 426483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 7801259 - 7801132
Alignment:
Q  29 tatgaagcacggatacggacacgga-------cactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtc 121  Q
    |||||||||||||||||||||||||       |||| |||||| |||||| |||||||||||         ||||||||||||| |||||||||||||||    
T  7801259 tatgaagcacggatacggacacggataccgaacactaacacgccgacacaactaataatttgaaaaaa---tcacataattcagcgtaattacaagtgtc 7801163  T
Q  122 ggtgtcgggacacgcctaatccgaggagtgt 152  Q
    |||||||||||||||||||||||| ||||||    
T  7801162 ggtgtcgggacacgcctaatccgaagagtgt 7801132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 27 - 128
Target Start/End: Complemental strand, 10770777 - 10770674
Alignment:
Q  27 cctatgaagcacggatacggacacg-----gacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtc 121  Q
    |||||||||||||||||||||||||     |||||||||||||  ||||| |||||||||||         |||||||||||||||||||||||||||||    
T  10770777 cctatgaagcacggatacggacacgacatggacactgacacgccaacacaactaataatttgaaaaaa---tcacataattcagtgtaattacaagtgtc 10770681  T
Q  122 ggtgtcg 128  Q
    |||||||    
T  10770680 ggtgtcg 10770674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 46 - 128
Target Start/End: Original strand, 16766677 - 16766756
Alignment:
Q  46 gacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtcg 128  Q
    |||| |||||||||||||| ||||||||||||||||||         ||||||||||||||||||||||||||||||||||||    
T  16766677 gacatggacactgacacgccgacacagctaataatttgaaaaaa---tcacataattcagtgtaattacaagtgtcggtgtcg 16766756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 28 - 121
Target Start/End: Original strand, 17302518 - 17302609
Alignment:
Q  28 ctatgaagcacggatacggacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtc 121  Q
    ||||||||| | |||||||||||| ||||||||||||||||||| |||||||||||         |||||||||||| ||||||||||||||||    
T  17302518 ctatgaagcgcagatacggacacgaacactgacacgctgacacaactaataatttg--aaaaaaatcacataattcaatgtaattacaagtgtc 17302609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 93 - 160
Target Start/End: Complemental strand, 5732545 - 5732479
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    ||||||| || |||||||||| | ||||||||||||| |||||||||||||||||||||||| |||||    
T  5732545 tcacatattttagtgtaattatatgtgtcggtgtcgg-acacgcctaatccgaggagtgtccatgctt 5732479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 46 - 129
Target Start/End: Original strand, 34595114 - 34595194
Alignment:
Q  46 gacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    |||||||||| |||||||| |||||| |||||||||||         |||||||||||||||||||||||||||||||||||||    
T  34595114 gacacggacaatgacacgccgacacaactaataatttgaaaaaa---tcacataattcagtgtaattacaagtgtcggtgtcgg 34595194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 128
Target Start/End: Complemental strand, 8365598 - 8365519
Alignment:
Q  46 gacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtcg 128  Q
    ||||||||||||||||||| |||||| |||||||||||         ||||||||||| ||||||||||||||||||||||||    
T  8365598 gacacggacactgacacgccgacacaactaataatttgaaaata---tcacataattcggtgtaattacaagtgtcggtgtcg 8365519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 128
Target Start/End: Complemental strand, 9107449 - 9107370
Alignment:
Q  46 gacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtcg 128  Q
    |||||||||||| |||||| ||||||||||||||||||         ||||| ||||||||||||||||||||||||||||||    
T  9107449 gacacggacactaacacgccgacacagctaataatttgaaaaaa---tcacaaaattcagtgtaattacaagtgtcggtgtcg 9107370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 128
Target Start/End: Original strand, 12696304 - 12696383
Alignment:
Q  46 gacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtcg 128  Q
    ||||||||||||||||||| ||||||||||||||||||         | ||||||||||||||||||||||||||| ||||||    
T  12696304 gacacggacactgacacgccgacacagctaataatttg---aaaaaattacataattcagtgtaattacaagtgtcagtgtcg 12696383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 152
Target Start/End: Original strand, 7027266 - 7027323
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcgggacacgcctaatccgaggagtgt 152  Q
    ||||||||||||||||||||| | |||||||||||  ||||||||||||||||| |||||    
T  7027266 tcacataattcagtgtaattatatgtgtcggtgtc--gacacgcctaatccgagaagtgt 7027323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 152
Target Start/End: Complemental strand, 9911563 - 9911495
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcg---------ggacacgcctaatccgaggagtgt 152  Q
    ||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||    
T  9911563 tcacataattcagtgtaattacaagtgtcggtgtcgtgtcaaccaggacacgcctaatccgaggagtgt 9911495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 208
Target Start/End: Original strand, 1694309 - 1694348
Alignment:
Q  169 catgatggaggttgtgaaaggtaaaaaatagccaattctt 208  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  1694309 catgatagaggttgtgaaaggtaaaaaatagccaattctt 1694348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 160
Target Start/End: Original strand, 7938096 - 7938214
Alignment:
Q  46 gacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgt-------cgggacacgcct 138  Q
    |||| |||||||||||||| ||||||||||||||||||         ||| |||||| |||||||||| ||||||||||||       || |||||||||    
T  7938096 gacatggacactgacacgccgacacagctaataatttg---aaaaaatcatataatttagtgtaattataagtgtcggtgtccgacaccgagacacgcct 7938192  T
Q  139 aatccgaggagtgtccgtgctt 160  Q
     |||||||||||||||||||||    
T  7938193 gatccgaggagtgtccgtgctt 7938214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 129
Target Start/End: Complemental strand, 7977909 - 7977829
Alignment:
Q  46 gacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    |||| ||| |||||||||| ||||||||||||||||||         | |||||||||||||||||||||||||||||||||||    
T  7977909 gacatggatactgacacgccgacacagctaataatttgaaaaaa---ttacataattcagtgtaattacaagtgtcggtgtcgg 7977829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 129
Target Start/End: Complemental strand, 8777052 - 8776972
Alignment:
Q  46 gacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    ||||||||||||||||||| |||||| |||||||||||         ||||| |||||||||||||||||||||| ||||||||    
T  8777052 gacacggacactgacacgccgacacaactaataatttg---aaaaaatcacaaaattcagtgtaattacaagtgttggtgtcgg 8776972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 128
Target Start/End: Original strand, 3398599 - 3398677
Alignment:
Q  46 gacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtcg 128  Q
    ||||||||||||||||||| ||||||||||||||||||         ||| ||||||||||||||||| |||| |||||||||    
T  3398599 gacacggacactgacacgccgacacagctaataatttg----aaaaatcatataattcagtgtaattataagtatcggtgtcg 3398677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 129
Target Start/End: Original strand, 28715321 - 28715355
Alignment:
Q  95 acataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    |||||||||||||||||||||||||||||||||||    
T  28715321 acataattcagtgtaattacaagtgtcggtgtcgg 28715355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 126
Target Start/End: Original strand, 9522915 - 9522948
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgt 126  Q
    ||||||||||||||||||||||||||||||||||    
T  9522915 tcacataattcagtgtaattacaagtgtcggtgt 9522948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 16833267 - 16833365
Alignment:
Q  30 atgaagcacggatacggacacg-----gacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggt 124  Q
    ||||||||| ||||||||||||     ||||||||||||| |||||| |||||||||||         ||||||| ||||||||||||||||||||||||    
T  16833267 atgaagcactgatacggacacgacacagacactgacacgccgacacaactaataatttgaaaaaa---tcacatacttcagtgtaattacaagtgtcggt 16833363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 129
Target Start/End: Complemental strand, 16388248 - 16388216
Alignment:
Q  97 ataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    |||||||||||||||||||||||||||||||||    
T  16388248 ataattcagtgtaattacaagtgtcggtgtcgg 16388216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 160
Target Start/End: Complemental strand, 17327627 - 17327595
Alignment:
Q  128 gggacacgcctaatccgaggagtgtccgtgctt 160  Q
    |||||||||||||||||||||||||||||||||    
T  17327627 gggacacgcctaatccgaggagtgtccgtgctt 17327595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 160
Target Start/End: Original strand, 4878025 - 4878056
Alignment:
Q  129 ggacacgcctaatccgaggagtgtccgtgctt 160  Q
    ||||||||||||||||||||||||||||||||    
T  4878025 ggacacgcctaatccgaggagtgtccgtgctt 4878056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 10842494 - 10842549
Alignment:
Q  28 ctatgaagcacggatacggacacggacactgacacgctgacacagctaataatttg 83  Q
    |||||||||||||| |||||||  ||||| ||||||| ||||| ||||||||||||    
T  10842494 ctatgaagcacggacacggacattgacacggacacgccgacaccgctaataatttg 10842549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 128
Target Start/End: Original strand, 31384944 - 31384979
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcg 128  Q
    ||||||||||||||||||||||||||||| ||||||    
T  31384944 tcacataattcagtgtaattacaagtgtcagtgtcg 31384979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 129
Target Start/End: Complemental strand, 32978933 - 32978898
Alignment:
Q  94 cacataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    ||||||||| ||||||||||||||||||||||||||    
T  32978933 cacataattaagtgtaattacaagtgtcggtgtcgg 32978898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 129
Target Start/End: Complemental strand, 6898314 - 6898280
Alignment:
Q  95 acataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    |||||||| ||||||||||||||||||||||||||    
T  6898314 acataattaagtgtaattacaagtgtcggtgtcgg 6898280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 128
Target Start/End: Original strand, 9027158 - 9027237
Alignment:
Q  46 gacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtcg 128  Q
    ||||||||||||||||||| ||||| ||||||||||||         ||||||||||| ||||||||| | ||||||||||||    
T  9027158 gacacggacactgacacgccgacaccgctaataatttg---agataatcacataattccgtgtaattatatgtgtcggtgtcg 9027237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 82
Target Start/End: Original strand, 17435162 - 17435215
Alignment:
Q  28 ctatgaagcacggatacggacacggacactgacacgctgacacagctaataattt 82  Q
    |||||||||||||||||| ||||||||||||| |||  |||| ||||||||||||    
T  17435162 ctatgaagcacggatacg-acacggacactgatacgtcgacatagctaataattt 17435215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 160
Target Start/End: Complemental strand, 17841564 - 17841534
Alignment:
Q  130 gacacgcctaatccgaggagtgtccgtgctt 160  Q
    |||||||||||||||||||||||||||||||    
T  17841564 gacacgcctaatccgaggagtgtccgtgctt 17841534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 129
Target Start/End: Complemental strand, 26402713 - 26402679
Alignment:
Q  95 acataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    ||||||||||||||||| |||||||||||||||||    
T  26402713 acataattcagtgtaatcacaagtgtcggtgtcgg 26402679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 58
Target Start/End: Complemental strand, 34225916 - 34225886
Alignment:
Q  28 ctatgaagcacggatacggacacggacactg 58  Q
    |||||||||||||||||||||||||||||||    
T  34225916 ctatgaagcacggatacggacacggacactg 34225886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 129
Target Start/End: Original strand, 3209367 - 3209442
Alignment:
Q  52 gacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    ||||| ||||||| ||||||||||||||||||         |||||||||| ||||| ||||||||||||||||||||    
T  3209367 gacacagacacgccgacacagctaataatttgaaaaaaa--tcacataatttagtgttattacaagtgtcggtgtcgg 3209442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 160
Target Start/End: Complemental strand, 7723233 - 7723204
Alignment:
Q  131 acacgcctaatccgaggagtgtccgtgctt 160  Q
    ||||||||||||||||||||||||||||||    
T  7723233 acacgcctaatccgaggagtgtccgtgctt 7723204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 56
Target Start/End: Original strand, 7938059 - 7938088
Alignment:
Q  27 cctatgaagcacggatacggacacggacac 56  Q
    ||||||||||||||||||||||||||||||    
T  7938059 cctatgaagcacggatacggacacggacac 7938088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 160
Target Start/End: Complemental strand, 8389446 - 8389413
Alignment:
Q  127 cgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    |||||||| |||||||||||||||||||||||||    
T  8389446 cgggacacacctaatccgaggagtgtccgtgctt 8389413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 160
Target Start/End: Complemental strand, 9025483 - 9025450
Alignment:
Q  127 cgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    |||||||||||||||||||| |||||||||||||    
T  9025483 cgggacacgcctaatccgagaagtgtccgtgctt 9025450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 128
Target Start/End: Complemental strand, 21395341 - 21395308
Alignment:
Q  95 acataattcagtgtaattacaagtgtcggtgtcg 128  Q
    |||||||| |||||||||||||||||||||||||    
T  21395341 acataatttagtgtaattacaagtgtcggtgtcg 21395308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 127
Target Start/End: Complemental strand, 27904070 - 27904037
Alignment:
Q  94 cacataattcagtgtaattacaagtgtcggtgtc 127  Q
    ||||||||||||||||||||||| ||||||||||    
T  27904070 cacataattcagtgtaattacaaatgtcggtgtc 27904037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 160
Target Start/End: Original strand, 31385011 - 31385044
Alignment:
Q  127 cgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    ||||||||||||||||| ||||||||||||||||    
T  31385011 cgggacacgcctaatccaaggagtgtccgtgctt 31385044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 160
Target Start/End: Original strand, 31959231 - 31959264
Alignment:
Q  127 cgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    |||||||| |||||||||||||||||||||||||    
T  31959231 cgggacacacctaatccgaggagtgtccgtgctt 31959264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 160
Target Start/End: Original strand, 34595215 - 34595248
Alignment:
Q  127 cgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    |||||||| |||||||||||||||||||||||||    
T  34595215 cgggacacacctaatccgaggagtgtccgtgctt 34595248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 129
Target Start/End: Complemental strand, 403899 - 403863
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    |||||||||| ||||||| ||||||||||||||||||    
T  403899 tcacataatttagtgtaactacaagtgtcggtgtcgg 403863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 129
Target Start/End: Complemental strand, 853894 - 853858
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    |||||||||| |||| |||||||||||||||||||||    
T  853894 tcacataattaagtgcaattacaagtgtcggtgtcgg 853858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 129
Target Start/End: Original strand, 1700376 - 1700412
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    ||||||| ||||||||||||| |||||||||||||||    
T  1700376 tcacatatttcagtgtaattataagtgtcggtgtcgg 1700412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 129
Target Start/End: Original strand, 4877967 - 4878003
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    |||||||||| ||| ||||||||||||||||||||||    
T  4877967 tcacataattaagtataattacaagtgtcggtgtcgg 4878003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 129
Target Start/End: Complemental strand, 7265628 - 7265592
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    ||||||||||||||||||||| | |||||||||||||    
T  7265628 tcacataattcagtgtaattatatgtgtcggtgtcgg 7265592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 160
Target Start/End: Complemental strand, 8365485 - 8365453
Alignment:
Q  128 gggacacgcctaatccgaggagtgtccgtgctt 160  Q
    ||||||||||||||||||||||| |||||||||    
T  8365485 gggacacgcctaatccgaggagtctccgtgctt 8365453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 160
Target Start/End: Complemental strand, 8805561 - 8805529
Alignment:
Q  128 gggacacgcctaatccgaggagtgtccgtgctt 160  Q
    |||||| ||||||||||||||||||||||||||    
T  8805561 gggacatgcctaatccgaggagtgtccgtgctt 8805529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 82
Target Start/End: Original strand, 9658859 - 9658895
Alignment:
Q  46 gacacggacactgacacgctgacacagctaataattt 82  Q
    ||||||||||||||||||| ||||| |||||||||||    
T  9658859 gacacggacactgacacgccgacaccgctaataattt 9658895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 160
Target Start/End: Complemental strand, 10339091 - 10339059
Alignment:
Q  128 gggacacgcctaatccgaggagtgtccgtgctt 160  Q
    ||||||||||||||| |||||||||||||||||    
T  10339091 gggacacgcctaatcggaggagtgtccgtgctt 10339059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 56
Target Start/End: Original strand, 18367781 - 18367809
Alignment:
Q  28 ctatgaagcacggatacggacacggacac 56  Q
    |||||||||||||||||||||||||||||    
T  18367781 ctatgaagcacggatacggacacggacac 18367809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 83
Target Start/End: Complemental strand, 19147485 - 19147445
Alignment:
Q  43 acggacacggacactgacacgctgacacagctaataatttg 83  Q
    ||||| |||||||||||||| | ||||||||||||||||||    
T  19147485 acggatacggacactgacacacggacacagctaataatttg 19147445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 129
Target Start/End: Complemental strand, 32511701 - 32511665
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    ||||||||||||||||||||| |||||| ||||||||    
T  32511701 tcacataattcagtgtaattataagtgttggtgtcgg 32511665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 6e-24; HSPs: 69)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 29 - 129
Target Start/End: Complemental strand, 46348479 - 46348382
Alignment:
Q  29 tatgaagcacggatacggacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtcg 128  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||         ||| |||||| |||||||||||||||||||||||||    
T  46348479 tatgaagcacggatacggacacggacactgacacgccgacacagctaataatttg---aaaaaatcatataatttagtgtaattacaagtgtcggtgtcg 46348383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 33 - 83
Target Start/End: Complemental strand, 18556548 - 18556498
Alignment:
Q  33 aagcacggatacggacacggacactgacacgctgacacagctaataatttg 83  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18556548 aagcacggatacggacacggacactgacacgccgacacagctaataatttg 18556498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 27 - 160
Target Start/End: Complemental strand, 48450690 - 48450555
Alignment:
Q  27 cctatgaagcacggatacgga-----cacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtc 121  Q
    ||||||||||| |||||||||     |||||||||||||||||  |||||||||||||||||         | |||||||| ||||||||||||||||||    
T  48450690 cctatgaagcatggatacggacacgacacggacactgacacgccaacacagctaataatttg---aaaaaataacataatttagtgtaattacaagtgtc 48450594  T
Q  122 ggtgtcgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    ||   | ||||||| ||||||||||||||||||||||||    
T  48450593 ggacacaggacacgtctaatccgaggagtgtccgtgctt 48450555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 46 - 128
Target Start/End: Complemental strand, 1486788 - 1486709
Alignment:
Q  46 gacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtcg 128  Q
    |||||||| |||||||||||||||||||||||||||||         ||||||||||||||||||||| ||||||||||||||    
T  1486788 gacacggatactgacacgctgacacagctaataatttg---aaaaaatcacataattcagtgtaattataagtgtcggtgtcg 1486709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 42359527 - 42359448
Alignment:
Q  47 acacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    ||||||||||||||||||||||||| |||||||||||         ||||| |||||||||||||||||||||||||||||||    
T  42359527 acacggacactgacacgctgacacatctaataatttgaaaaaa---tcacaaaattcagtgtaattacaagtgtcggtgtcgg 42359448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 28 - 145
Target Start/End: Complemental strand, 31672987 - 31672879
Alignment:
Q  28 ctatgaagcacggatacggacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtc 127  Q
    |||||||||||||||||||     ||||||||||| | ||||||||||||||||||         |||| ||||||||||||||||||||| ||||||||    
T  31672987 ctatgaagcacggatacgg-----gacactgacacaccgacacagctaataatttgaaaaaa---tcacttaattcagtgtaattacaagtctcggtgtc 31672896  T
Q  128 gggacacgcctaatccga 145  Q
     |||||||||||||||||    
T  31672895 -ggacacgcctaatccga 31672879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 96 - 160
Target Start/End: Complemental strand, 24334737 - 24334669
Alignment:
Q  96 cataattcagtgtaattacaagtgtcggtgtcgg----gacacgcctaatccgaggagtgtccgtgctt 160  Q
    ||||||||||||||||||||||||||||||||||    | |||||||||||| || |||||||||||||    
T  24334737 cataattcagtgtaattacaagtgtcggtgtcggacacgtcacgcctaatccaagtagtgtccgtgctt 24334669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 28 - 128
Target Start/End: Complemental strand, 24577289 - 24577186
Alignment:
Q  28 ctatgaagcacggatacggacacgga------cactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtc 121  Q
    ||||||||||||||||||||||| ||      ||| |||||||||||||| |||||||||||         |||||||||||||||||||||||||||||    
T  24577289 ctatgaagcacggatacggacactgaacacgacacggacacgctgacacaactaataatttgaaaaaa---tcacataattcagtgtaattacaagtgtc 24577193  T
Q  122 ggtgtcg 128  Q
    |||||||    
T  24577192 ggtgtcg 24577186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 129
Target Start/End: Original strand, 51409981 - 51410085
Alignment:
Q  28 ctatgaagcacggatacggacacggacact-----gacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcg 122  Q
    |||||||||||||||||||||||||||||      |||| || |||||| |||||||||||         ||||||||||||||||||||||||||||||    
T  51409981 ctatgaagcacggatacggacacggacacaaaacggacatgccgacacatctaataatttgaaaaaaa--tcacataattcagtgtaattacaagtgtcg 51410078  T
Q  123 gtgtcgg 129  Q
    |||||||    
T  51410079 gtgtcgg 51410085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 129
Target Start/End: Complemental strand, 22515964 - 22515886
Alignment:
Q  48 cacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    ||||||||| ||||||| ||||||||||||||||||         |||||||||| ||||||||||||||||||||||||||    
T  22515964 cacggacacggacacgcagacacagctaataatttgaaaaaa---tcacataatttagtgtaattacaagtgtcggtgtcgg 22515886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 160
Target Start/End: Complemental strand, 35702692 - 35702547
Alignment:
Q  27 cctatgaagcacggatacggacacgg------acactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgt 120  Q
    |||||||||||||||||||||||| |      ||||||||| || ||||||||||||||||||         ||| |||||| |||||||||||||||||    
T  35702692 cctatgaagcacggatacggacaccggacacgacactgacatgccgacacagctaataatttgaaaact---tcaaataattaagtgtaattacaagtgt 35702596  T
Q  121 cggtgtcgg---------gacacgcctaatccgaggagtgtccgtgctt 160  Q
    | |||||||         |||||||||||||||||||||||||||||||    
T  35702595 cagtgtcggacacgatgggacacgcctaatccgaggagtgtccgtgctt 35702547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 129
Target Start/End: Complemental strand, 38078742 - 38078660
Alignment:
Q  44 cggacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    |||||||| |||||||||||  ||||||||||||||||||         |||||||||||| ||||||||||||||||||||||||    
T  38078742 cggacacgaacactgacacgtcgacacagctaataatttgaaaaaa---tcacataattcaatgtaattacaagtgtcggtgtcgg 38078660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 128
Target Start/End: Original strand, 6427425 - 6427523
Alignment:
Q  29 tatgaagcacggatacggacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtcg 128  Q
    ||||||||| ||||||||||||| ||||||||| || |||||| |||||||||||         |||||||||||| ||||| |||||||||| ||||||    
T  6427425 tatgaagcatggatacggacacg-acactgacatgccgacacaactaataatttgaaaaaaaaatcacataattcaatgtaactacaagtgtcagtgtcg 6427523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 129
Target Start/End: Original strand, 18337353 - 18337389
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    |||||||||||||||||||||||||||||||||||||    
T  18337353 tcacataattcagtgtaattacaagtgtcggtgtcgg 18337389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 95 - 160
Target Start/End: Complemental strand, 41877503 - 41877437
Alignment:
Q  95 acataattcagtgtaattacaagtgtcggtgtcgggacac--gcctaatccgaggagtgtccgtgctt 160  Q
    |||||||| |||||||||||||||||||||||| ||||||  |||||| |||||||||| ||||||||    
T  41877503 acataatttagtgtaattacaagtgtcggtgtc-ggacacgtgcctaacccgaggagtggccgtgctt 41877437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 121
Target Start/End: Complemental strand, 14359624 - 14359529
Alignment:
Q  27 cctatgaagcacggatacggacacg-----gacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtc 121  Q
    |||||||||||||||||||||||||     ||||| ||||||| ||||||||||||||||||         |||||||||| ||||||||||||||||||    
T  14359624 cctatgaagcacggatacggacacgacacagacacggacacgccgacacagctaataatttg----aaaaatcacataatttagtgtaattacaagtgtc 14359529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 128
Target Start/End: Original strand, 47989521 - 47989556
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcg 128  Q
    ||||||||||||||||||||||||||||||||||||    
T  47989521 tcacataattcagtgtaattacaagtgtcggtgtcg 47989556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 160
Target Start/End: Complemental strand, 398844 - 398738
Alignment:
Q  46 gacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtcgggacacgcctaatccga 145  Q
    ||||||||||||||||||| ||||| ||||||||||||         ||||||||||||||||||||| | |||||     ||||||||||||||||  |    
T  398844 gacacggacactgacacgccgacaccgctaataatttg---aaaaaatcacataattcagtgtaattataggtgtc-----cgggacacgcctaatctaa 398753  T
Q  146 ggagtgtccgtgctt 160  Q
    | |||||||||||||    
T  398752 gaagtgtccgtgctt 398738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 127
Target Start/End: Original strand, 1815281 - 1815315
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtc 127  Q
    |||||||||||||||||||||||||||||||||||    
T  1815281 tcacataattcagtgtaattacaagtgtcggtgtc 1815315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 128
Target Start/End: Original strand, 5944261 - 5944342
Alignment:
Q  46 gacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtcg 128  Q
    ||||| ||||||||||||| | ||||||||||||||||         ||||||||||||||||||||| ||||||||||||||    
T  5944261 gacacagacactgacacgccgccacagctaataatttgaaaaaaaa-tcacataattcagtgtaattataagtgtcggtgtcg 5944342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 129
Target Start/End: Complemental strand, 19058889 - 19058855
Alignment:
Q  95 acataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    |||||||||||||||||||||||||||||||||||    
T  19058889 acataattcagtgtaattacaagtgtcggtgtcgg 19058855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 127
Target Start/End: Complemental strand, 40258968 - 40258934
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtc 127  Q
    |||||||||||||||||||||||||||||||||||    
T  40258968 tcacataattcagtgtaattacaagtgtcggtgtc 40258934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 160
Target Start/End: Original strand, 47989588 - 47989622
Alignment:
Q  126 tcgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    |||||||||||||||||||||||||||||||||||    
T  47989588 tcgggacacgcctaatccgaggagtgtccgtgctt 47989622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 128
Target Start/End: Complemental strand, 6612204 - 6612171
Alignment:
Q  95 acataattcagtgtaattacaagtgtcggtgtcg 128  Q
    ||||||||||||||||||||||||||||||||||    
T  6612204 acataattcagtgtaattacaagtgtcggtgtcg 6612171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 129
Target Start/End: Complemental strand, 22881689 - 22881615
Alignment:
Q  52 gacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    ||||||||||||| |||||| |||||||||||         |||||||||| ||||||||||||||||||||||||||    
T  22881689 gacactgacacgccgacacaactaataatttgaaaaaa---tcacataatttagtgtaattacaagtgtcggtgtcgg 22881615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 127
Target Start/End: Complemental strand, 28273191 - 28273089
Alignment:
Q  27 cctatgaagcacggatacggacacg-----gacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtc 121  Q
    ||||||||||||||||||||||| |     |||||||||| ||||||||| ||||| |||||         ||| |||||||||||||||||||||||||    
T  28273191 cctatgaagcacggatacggacatgacaaggacactgacatgctgacacaactaatcatttgaaaaaa---tcatataattcagtgtaattacaagtgtc 28273095  T
Q  122 ggtgtc 127  Q
    ||||||    
T  28273094 ggtgtc 28273089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 160
Target Start/End: Complemental strand, 42359427 - 42359394
Alignment:
Q  127 cgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    ||||||||||||||||||||||||||||||||||    
T  42359427 cgggacacgcctaatccgaggagtgtccgtgctt 42359394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 128
Target Start/End: Original strand, 113289 - 113358
Alignment:
Q  56 ctgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtcg 128  Q
    ||||||||| ||||||||||||||||||         |||||||||||||||||||||||||||| |||||||    
T  113289 ctgacacgccgacacagctaataatttgaaaaaa---tcacataattcagtgtaattacaagtgtaggtgtcg 113358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 160
Target Start/End: Original strand, 37598913 - 37598945
Alignment:
Q  128 gggacacgcctaatccgaggagtgtccgtgctt 160  Q
    |||||||||||||||||||||||||||||||||    
T  37598913 gggacacgcctaatccgaggagtgtccgtgctt 37598945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 128
Target Start/End: Complemental strand, 1705027 - 1704992
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcg 128  Q
    ||||||||||||| ||||||||||||||||||||||    
T  1705027 tcacataattcagggtaattacaagtgtcggtgtcg 1704992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 128
Target Start/End: Original strand, 6332694 - 6332729
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcg 128  Q
    |||||||||||||||||||||||||| |||||||||    
T  6332694 tcacataattcagtgtaattacaagtatcggtgtcg 6332729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 6427313 - 6427367
Alignment:
Q  28 ctatgaagcacggatacggacacggacactgacacgctgacacagctaataatttg 83  Q
    |||||||||||||| |||| |||||||||||||||||  |||| ||||||||||||    
T  6427313 ctatgaagcacggacacgg-cacggacactgacacgccaacaccgctaataatttg 6427367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 160
Target Start/End: Complemental strand, 16297257 - 16297226
Alignment:
Q  129 ggacacgcctaatccgaggagtgtccgtgctt 160  Q
    ||||||||||||||||||||||||||||||||    
T  16297257 ggacacgcctaatccgaggagtgtccgtgctt 16297226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 126
Target Start/End: Original strand, 21378604 - 21378635
Alignment:
Q  95 acataattcagtgtaattacaagtgtcggtgt 126  Q
    ||||||||||||||||||||||||||||||||    
T  21378604 acataattcagtgtaattacaagtgtcggtgt 21378635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 160
Target Start/End: Original strand, 22947813 - 22947844
Alignment:
Q  129 ggacacgcctaatccgaggagtgtccgtgctt 160  Q
    ||||||||||||||||||||||||||||||||    
T  22947813 ggacacgcctaatccgaggagtgtccgtgctt 22947844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 160
Target Start/End: Original strand, 30359412 - 30359479
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    |||||||||| ||||||| | |||||||||    ||||||||||| |||| |||||||||||||||||    
T  30359412 tcacataatttagtgtaactgcaagtgtcgacaacgggacacgccaaatctgaggagtgtccgtgctt 30359479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 128
Target Start/End: Complemental strand, 31694745 - 31694710
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcg 128  Q
    |||||||||||||| |||||||||||||||||||||    
T  31694745 tcacataattcagtataattacaagtgtcggtgtcg 31694710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 128
Target Start/End: Original strand, 2218264 - 2218298
Alignment:
Q  94 cacataattcagtgtaattacaagtgtcggtgtcg 128  Q
    ||||||||| |||||||||||||||||||||||||    
T  2218264 cacataatttagtgtaattacaagtgtcggtgtcg 2218298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 161
Target Start/End: Complemental strand, 5898244 - 5898210
Alignment:
Q  127 cgggacacgcctaatccgaggagtgtccgtgcttt 161  Q
    ||||||||| |||||||||||||||||||||||||    
T  5898244 cgggacacgtctaatccgaggagtgtccgtgcttt 5898210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 160
Target Start/End: Complemental strand, 17705621 - 17705551
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcgg----gacacgcctaatccgaggagtgtccgtgctt 160  Q
    ||||||||||||||||||||| | |||||| ||||||    ||||||| ||||| |||||||||||||||||    
T  17705621 tcacataattcagtgtaattatatgtgtcg-tgtcggacgcgacacgcttaatctgaggagtgtccgtgctt 17705551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 160
Target Start/End: Complemental strand, 21366027 - 21365997
Alignment:
Q  130 gacacgcctaatccgaggagtgtccgtgctt 160  Q
    |||||||||||||||||||||||||||||||    
T  21366027 gacacgcctaatccgaggagtgtccgtgctt 21365997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 160
Target Start/End: Complemental strand, 22515862 - 22515832
Alignment:
Q  130 gacacgcctaatccgaggagtgtccgtgctt 160  Q
    |||||||||||||||||||||||||||||||    
T  22515862 gacacgcctaatccgaggagtgtccgtgctt 22515832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 123
Target Start/End: Original strand, 31015067 - 31015097
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcgg 123  Q
    |||||||||||||||||||||||||||||||    
T  31015067 tcacataattcagtgtaattacaagtgtcgg 31015097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 129
Target Start/End: Original strand, 37598793 - 37598891
Alignment:
Q  28 ctatgaagcacggatacggacac-ggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgt 126  Q
    |||||| ||||||| || ||||| |||||||||||||| |||||| |||||||||||         ||||| ||||||||||||||| ||||||||||||    
T  37598793 ctatgacgcacggacacagacaccggacactgacacgccgacacaactaataatttg---aaaaaatcaca-aattcagtgtaattataagtgtcggtgt 37598888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 160
Target Start/End: Complemental strand, 1486682 - 1486649
Alignment:
Q  127 cgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    ||||||||||||||||||||||||||| ||||||    
T  1486682 cgggacacgcctaatccgaggagtgtctgtgctt 1486649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 128
Target Start/End: Complemental strand, 5376533 - 5376500
Alignment:
Q  95 acataattcagtgtaattacaagtgtcggtgtcg 128  Q
    ||||||||||||||||||| ||||||||||||||    
T  5376533 acataattcagtgtaattaaaagtgtcggtgtcg 5376500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 83
Target Start/End: Complemental strand, 5927419 - 5927382
Alignment:
Q  46 gacacggacactgacacgctgacacagctaataatttg 83  Q
    |||||||||||||||||||| |||| ||||||||||||    
T  5927419 gacacggacactgacacgctaacactgctaataatttg 5927382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 160
Target Start/End: Original strand, 9828136 - 9828169
Alignment:
Q  127 cgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    ||||||||| ||||||||||||||||||||||||    
T  9828136 cgggacacgtctaatccgaggagtgtccgtgctt 9828169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 160
Target Start/End: Original strand, 16812637 - 16812670
Alignment:
Q  127 cgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    |||||||||||||||| |||||||||||||||||    
T  16812637 cgggacacgcctaatctgaggagtgtccgtgctt 16812670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 160
Target Start/End: Original strand, 26830668 - 26830701
Alignment:
Q  127 cgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    |||||||||||||||| |||||||||||||||||    
T  26830668 cgggacacgcctaatcagaggagtgtccgtgctt 26830701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 160
Target Start/End: Complemental strand, 27965978 - 27965945
Alignment:
Q  127 cgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    |||||||||||||||||||||||||||| |||||    
T  27965978 cgggacacgcctaatccgaggagtgtccatgctt 27965945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 128
Target Start/End: Complemental strand, 30173795 - 30173762
Alignment:
Q  95 acataattcagtgtaattacaagtgtcggtgtcg 128  Q
    |||||| |||||||||||||||||||||||||||    
T  30173795 acataactcagtgtaattacaagtgtcggtgtcg 30173762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 160
Target Start/End: Original strand, 34741927 - 34741960
Alignment:
Q  127 cgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    ||||||||||||||||||| ||||||||||||||    
T  34741927 cgggacacgcctaatccgaagagtgtccgtgctt 34741960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 83
Target Start/End: Original strand, 40917731 - 40917768
Alignment:
Q  46 gacacggacactgacacgctgacacagctaataatttg 83  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  40917731 gacacggatactgacacgccgacacagctaataatttg 40917768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 160
Target Start/End: Original strand, 40917841 - 40917874
Alignment:
Q  127 cgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    |||||||||||||||||||||| |||||||||||    
T  40917841 cgggacacgcctaatccgaggactgtccgtgctt 40917874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 83
Target Start/End: Complemental strand, 48040541 - 48040504
Alignment:
Q  46 gacacggacactgacacgctgacacagctaataatttg 83  Q
    ||||||||||||||||||| ||||||| ||||||||||    
T  48040541 gacacggacactgacacgccgacacagataataatttg 48040504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 56
Target Start/End: Complemental strand, 48548078 - 48548049
Alignment:
Q  27 cctatgaagcacggatacggacacggacac 56  Q
    ||||||||||||||||||||||||||||||    
T  48548078 cctatgaagcacggatacggacacggacac 48548049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 83
Target Start/End: Complemental strand, 2896199 - 2896163
Alignment:
Q  47 acacggacactgacacgctgacacagctaataatttg 83  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  2896199 acacggacactgacacgccgacaccgctaataatttg 2896163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 56
Target Start/End: Complemental strand, 10577850 - 10577822
Alignment:
Q  28 ctatgaagcacggatacggacacggacac 56  Q
    |||||||||||||||||||||||||||||    
T  10577850 ctatgaagcacggatacggacacggacac 10577822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 160
Target Start/End: Original strand, 15765840 - 15765872
Alignment:
Q  128 gggacacgcctaatccgaggagtgtccgtgctt 160  Q
    |||||||||||||||||| ||||||||||||||    
T  15765840 gggacacgcctaatccgaagagtgtccgtgctt 15765872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 127
Target Start/End: Complemental strand, 18190141 - 18190109
Alignment:
Q  95 acataattcagtgtaattacaagtgtcggtgtc 127  Q
    |||||||||||||||||||||||||||| ||||    
T  18190141 acataattcagtgtaattacaagtgtcgatgtc 18190109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 160
Target Start/End: Complemental strand, 18556422 - 18556390
Alignment:
Q  128 gggacacgcctaatccgaggagtgtccgtgctt 160  Q
    ||||||||||||||||||| |||||||||||||    
T  18556422 gggacacgcctaatccgagaagtgtccgtgctt 18556390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 129
Target Start/End: Original strand, 21620979 - 21621015
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    ||||||||||||||||| ||||||| |||||||||||    
T  21620979 tcacataattcagtgtatttacaagcgtcggtgtcgg 21621015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 56
Target Start/End: Original strand, 25934572 - 25934600
Alignment:
Q  28 ctatgaagcacggatacggacacggacac 56  Q
    |||||||||||||||||||||||||||||    
T  25934572 ctatgaagcacggatacggacacggacac 25934600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 83
Target Start/End: Complemental strand, 29144440 - 29144400
Alignment:
Q  43 acggacacggacactgacacgctgacacagctaataatttg 83  Q
    |||||||| |||||||| |||| ||||||||||||||||||    
T  29144440 acggacactgacactgatacgccgacacagctaataatttg 29144400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 129
Target Start/End: Original strand, 30749864 - 30749900
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    ||||||||||||||||||||| | |||||||||||||    
T  30749864 tcacataattcagtgtaattatatgtgtcggtgtcgg 30749900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 129
Target Start/End: Original strand, 30771315 - 30771351
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    ||||||||||||||||||||| | |||||||||||||    
T  30771315 tcacataattcagtgtaattatatgtgtcggtgtcgg 30771351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 160
Target Start/End: Original strand, 36878548 - 36878580
Alignment:
Q  128 gggacacgcctaatccgaggagtgtccgtgctt 160  Q
    |||||||||||||||| ||||||||||||||||    
T  36878548 gggacacgcctaatcccaggagtgtccgtgctt 36878580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 56
Target Start/End: Complemental strand, 38078771 - 38078743
Alignment:
Q  28 ctatgaagcacggatacggacacggacac 56  Q
    |||||||||||||||||||||||||||||    
T  38078771 ctatgaagcacggatacggacacggacac 38078743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 46 - 160
Target Start/End: Original strand, 46662 - 46771
Alignment:
Q  46 gacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtcgggacacgcctaatccga 145  Q
    |||||||||| |||||||| ||||||| ||||||||||         |||||||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  46662 gacacggacaatgacacgccgacacagttaataatttgaaaaaa---tcacataattcagtgtaattacaaatgtcggtgtc--gacacgcctaatccga 46756  T
Q  146 ggagtgtccgtgctt 160  Q
    |||||||||||||||    
T  46757 ggagtgtccgtgctt 46771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 2e-23; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 26 - 129
Target Start/End: Complemental strand, 36450853 - 36450753
Alignment:
Q  26 ccctatgaagcacggatacggacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtg 125  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||         ||||| |||||||||||||||||||||| ||||    
T  36450853 ccctatgaagcacggatacggacacggacactgacacgccgacacaactaataatttg---aaaaaatcacagaattcagtgtaattacaagtgtaggtg 36450757  T
Q  126 tcgg 129  Q
    ||||    
T  36450756 tcgg 36450753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 128
Target Start/End: Original strand, 22651956 - 22652035
Alignment:
Q  46 gacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtcg 128  Q
    ||||||||||||||||||| ||||||||||||||||||         |||||||||||| | |||||||||||||||||||||    
T  22651956 gacacggacactgacacgccgacacagctaataatttg---aaaaaatcacataattcaatataattacaagtgtcggtgtcg 22652035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 93 - 160
Target Start/End: Original strand, 31514897 - 31514968
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcgg----gacacgcctaatccgaggagtgtccgtgctt 160  Q
    ||||||||||||| |||| ||||||||| ||||| ||    |||||||||||||||||||||||||||||||    
T  31514897 tcacataattcagcgtaactacaagtgttggtgttggacacgacacgcctaatccgaggagtgtccgtgctt 31514968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 129
Target Start/End: Original strand, 4948676 - 4948712
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    |||||||||||||||||||||||||||||||||||||    
T  4948676 tcacataattcagtgtaattacaagtgtcggtgtcgg 4948712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 126
Target Start/End: Complemental strand, 29510383 - 29510306
Alignment:
Q  46 gacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgt 126  Q
    ||||||||||||||||||| ||||||||||||||||||         ||||| |||||||| |||||||||||||||||||    
T  29510383 gacacggacactgacacgccgacacagctaataatttg---aaaaaatcacaaaattcagtataattacaagtgtcggtgt 29510306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 129
Target Start/End: Original strand, 20873049 - 20873129
Alignment:
Q  46 gacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    ||||||||||||||||||| |||| || ||||||||||         |||||||||| ||||||||||||||||||||||||||    
T  20873049 gacacggacactgacacgccgacatagataataatttgaaaaaa---tcacataatttagtgtaattacaagtgtcggtgtcgg 20873129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 128
Target Start/End: Original strand, 25566865 - 25566900
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcg 128  Q
    ||||||||||||||||||||||||||||||||||||    
T  25566865 tcacataattcagtgtaattacaagtgtcggtgtcg 25566900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 160
Target Start/End: Complemental strand, 30077422 - 30077356
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    ||||||||||||||||||||||||||||| ||||| ||| |||||  ||||||| |||||| ||||||    
T  30077422 tcacataattcagtgtaattacaagtgtccgtgtc-ggatacgcccgatccgagcagtgtctgtgctt 30077356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 83
Target Start/End: Complemental strand, 31109615 - 31109560
Alignment:
Q  28 ctatgaagcacggatacggacacggacactgacacgctgacacagctaataatttg 83  Q
    ||||||||||| |||| |||||||||||||||||||| ||||| | ||||||||||    
T  31109615 ctatgaagcactgatatggacacggacactgacacgccgacaccgttaataatttg 31109560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 128
Target Start/End: Original strand, 24669413 - 24669492
Alignment:
Q  46 gacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtcg 128  Q
    ||||| ||||||||||||||||||| | ||||||||||         | ||||||||||||||||||||||||||||||||||    
T  24669413 gacacagacactgacacgctgacaccgttaataatttgaggaaa---ttacataattcagtgtaattacaagtgtcggtgtcg 24669492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 135
Target Start/End: Original strand, 40332215 - 40332256
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcgggacacg 135  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  40332215 tcacataattcagtgtaattacaagtgtcggtgt-gggacacg 40332256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 22204603 - 22204655
Alignment:
Q  29 tatgaagcacggatacggacacggacactgacacgctgacacagctaataattt 82  Q
    ||||||||| ||||||||| |||||||||||||||| |||||| ||||||||||    
T  22204603 tatgaagca-ggatacggatacggacactgacacgccgacacaactaataattt 22204655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 129
Target Start/End: Original strand, 22595950 - 22596054
Alignment:
Q  28 ctatgaagcacggatacggacacgg------acactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtc 121  Q
    ||||||||||||||||||||||| |      |||||||||||| |||||||||||||||||          | ||||||||||||||||||||||||||     
T  22595950 ctatgaagcacggatacggacaccggacacaacactgacacgccgacacagctaataattt---aaaaaaataacataattcagtgtaattacaagtgtt 22596046  T
Q  122 ggtgtcgg 129  Q
    ||||||||    
T  22596047 ggtgtcgg 22596054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 158
Target Start/End: Complemental strand, 30271287 - 30271224
Alignment:
Q  96 cataattcagtgtaattacaagtgtcggtgtcgggacac--gcctaatccgaggagtgtccgtgc 158  Q
    |||||| ||||||||||||||||||||||||| ||||||  ||||||  ||||||||||||||||    
T  30271287 cataatgcagtgtaattacaagtgtcggtgtc-ggacacgtgcctaactcgaggagtgtccgtgc 30271224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 161
Target Start/End: Complemental strand, 31109495 - 31109462
Alignment:
Q  128 gggacacgcctaatccgaggagtgtccgtgcttt 161  Q
    ||||||||||||||||||||||||||||||||||    
T  31109495 gggacacgcctaatccgaggagtgtccgtgcttt 31109462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 129
Target Start/End: Original strand, 24613544 - 24613580
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    |||||||||| ||||||||||||||||||||||||||    
T  24613544 tcacataattaagtgtaattacaagtgtcggtgtcgg 24613580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 128
Target Start/End: Complemental strand, 2572091 - 2572056
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcg 128  Q
    |||||||||| |||||||||||||||||||||||||    
T  2572091 tcacataatttagtgtaattacaagtgtcggtgtcg 2572056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 128
Target Start/End: Original strand, 8342996 - 8343031
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcg 128  Q
    |||||||||| |||||||||||||||||||||||||    
T  8342996 tcacataatttagtgtaattacaagtgtcggtgtcg 8343031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 160
Target Start/End: Original strand, 34897109 - 34897175
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    ||||||||||||||||||||| | |||||| |||| ||||||   |||| ||||||||||||||||||    
T  34897109 tcacataattcagtgtaattatatgtgtcgatgtc-ggacacatgtaattcgaggagtgtccgtgctt 34897175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 62
Target Start/End: Complemental strand, 5137518 - 5137484
Alignment:
Q  28 ctatgaagcacggatacggacacggacactgacac 62  Q
    ||||||||||||||||||||||||||||| |||||    
T  5137518 ctatgaagcacggatacggacacggacacggacac 5137484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 129
Target Start/End: Original strand, 5813569 - 5813652
Alignment:
Q  43 acggacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    ||||| |||||||| ||||||| ||||||||||||||||||         ||||||| || ||||||| ||||||||||||||||||    
T  5813569 acggatacggacacggacacgccgacacagctaataatttg---aaaaagtcacatattttagtgtaaatacaagtgtcggtgtcgg 5813652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 128
Target Start/End: Complemental strand, 13437043 - 13436964
Alignment:
Q  46 gacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtcg 128  Q
    |||| |||||||||||||| ||||||||||||||||||         ||||||||||||  ||||| ||||||||||||||||    
T  13437043 gacatggacactgacacgccgacacagctaataatttg---aaaaaatcacataattcatggtaataacaagtgtcggtgtcg 13436964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 83
Target Start/End: Complemental strand, 25192423 - 25192389
Alignment:
Q  49 acggacactgacacgctgacacagctaataatttg 83  Q
    |||||||||||||||| ||||||||||||||||||    
T  25192423 acggacactgacacgccgacacagctaataatttg 25192389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 127
Target Start/End: Original strand, 31557020 - 31557054
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtc 127  Q
    |||||||||||||||||||||||||| ||||||||    
T  31557020 tcacataattcagtgtaattacaagtttcggtgtc 31557054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 160
Target Start/End: Complemental strand, 15816096 - 15816063
Alignment:
Q  127 cgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    |||||||||||||||||||| |||||||||||||    
T  15816096 cgggacacgcctaatccgagaagtgtccgtgctt 15816063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 160
Target Start/End: Original strand, 16987994 - 16988027
Alignment:
Q  127 cgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    |||||||| |||||||||||||||||||||||||    
T  16987994 cgggacacccctaatccgaggagtgtccgtgctt 16988027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 160
Target Start/End: Original strand, 17751737 - 17751770
Alignment:
Q  127 cgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    ||||||||||||||||||||||||||||| ||||    
T  17751737 cgggacacgcctaatccgaggagtgtccgcgctt 17751770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 160
Target Start/End: Original strand, 17760724 - 17760757
Alignment:
Q  127 cgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    ||||||||||||||||||||||||||||| ||||    
T  17760724 cgggacacgcctaatccgaggagtgtccgcgctt 17760757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 122
Target Start/End: Original strand, 18407743 - 18407772
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcg 122  Q
    ||||||||||||||||||||||||||||||    
T  18407743 tcacataattcagtgtaattacaagtgtcg 18407772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 160
Target Start/End: Original strand, 22652068 - 22652101
Alignment:
Q  127 cgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    ||||||||| ||||||||||||||||||||||||    
T  22652068 cgggacacgtctaatccgaggagtgtccgtgctt 22652101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 160
Target Start/End: Original strand, 25566911 - 25566944
Alignment:
Q  127 cgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    ||||||||||||||||||||||||||| ||||||    
T  25566911 cgggacacgcctaatccgaggagtgtctgtgctt 25566944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 160
Target Start/End: Complemental strand, 29510271 - 29510238
Alignment:
Q  127 cgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    |||||||| |||||||||||||||||||||||||    
T  29510271 cgggacacacctaatccgaggagtgtccgtgctt 29510238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 160
Target Start/End: Original strand, 39820509 - 39820542
Alignment:
Q  127 cgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    |||||||||||||||||||| |||||||||||||    
T  39820509 cgggacacgcctaatccgagaagtgtccgtgctt 39820542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 56
Target Start/End: Complemental strand, 3951644 - 3951616
Alignment:
Q  28 ctatgaagcacggatacggacacggacac 56  Q
    |||||||||||||||||||||||||||||    
T  3951644 ctatgaagcacggatacggacacggacac 3951616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 129
Target Start/End: Complemental strand, 4786373 - 4786337
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    ||||||||||||||||||||| | |||||||||||||    
T  4786373 tcacataattcagtgtaattatatgtgtcggtgtcgg 4786337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 129
Target Start/End: Complemental strand, 15023288 - 15023256
Alignment:
Q  97 ataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    |||||||||||||||||||||||||| ||||||    
T  15023288 ataattcagtgtaattacaagtgtcgatgtcgg 15023256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 56
Target Start/End: Complemental strand, 20785574 - 20785546
Alignment:
Q  28 ctatgaagcacggatacggacacggacac 56  Q
    |||||||||||||||||||||||||||||    
T  20785574 ctatgaagcacggatacggacacggacac 20785546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 56
Target Start/End: Complemental strand, 24413675 - 24413647
Alignment:
Q  28 ctatgaagcacggatacggacacggacac 56  Q
    |||||||||||||||||||||||||||||    
T  24413675 ctatgaagcacggatacggacacggacac 24413647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 160
Target Start/End: Original strand, 27213571 - 27213639
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcgg-tgtcgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    |||||||||||| |||||||| | |||||||    ||||||||| |||||||||| |||||||||||||    
T  27213571 tcacataattcactgtaattatatgtgtcggacaccgggacacggctaatccgagaagtgtccgtgctt 27213639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 2e-20; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 46 - 160
Target Start/End: Original strand, 27945021 - 27945132
Alignment:
Q  46 gacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtcgggacacgcctaatccga 145  Q
    ||||||||||||||||||| |||||  |||||||||||         | |||||||||||||||||||||||||||||||||| | |||||||||  |||    
T  27945021 gacacggacactgacacgccgacaccactaataatttgagaaaa---ttacataattcagtgtaattacaagtgtcggtgtcgtgtcacgcctaactcga 27945117  T
Q  146 ggagtgtccgtgctt 160  Q
    |||||||||||||||    
T  27945118 ggagtgtccgtgctt 27945132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 27 - 129
Target Start/End: Original strand, 15680770 - 15680869
Alignment:
Q  27 cctatgaagcacggatacggacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgt 126  Q
    ||||||||||||||||||||||| |||||||||||||| |||| |||||||||||           |||||||||| |||||||||| ||||||||||||    
T  15680770 cctatgaagcacggatacggacatggacactgacacgccgacatagctaataatt---aaaaaaaatcacataatttagtgtaattataagtgtcggtgt 15680866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 27 - 128
Target Start/End: Complemental strand, 18215284 - 18215186
Alignment:
Q  27 cctatgaagcacggatacggacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgt 126  Q
    |||||||||||||||| | |||||||||||| |||||| ||| ||||||||||||||         ||||||||| ||||||| ||||||||||||||||    
T  18215284 cctatgaagcacggatgcagacacggacactaacacgccgacgcagctaataatttg---aaaaaatcacataatgcagtgtagttacaagtgtcggtgt 18215188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 128
Target Start/End: Complemental strand, 5409915 - 5409836
Alignment:
Q  46 gacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtcg 128  Q
    |||| ||||||||||||||||| |||||||||||||||         ||||||||||||||| ||||||||||||||||||||    
T  5409915 gacatggacactgacacgctgatacagctaataatttgaaaaaa---tcacataattcagtgcaattacaagtgtcggtgtcg 5409836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 82
Target Start/End: Complemental strand, 7197394 - 7197340
Alignment:
Q  28 ctatgaagcacggatacggacacggacactgacacgctgacacagctaataattt 82  Q
    |||||||||||||||||| |||| |||| |||||||| |||||||||||||||||    
T  7197394 ctatgaagcacggatacgaacacagacattgacacgccgacacagctaataattt 7197340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 128
Target Start/End: Original strand, 24339622 - 24339701
Alignment:
Q  46 gacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtcg 128  Q
    |||| ||||| |||||||| ||||||||||||||||||         ||||||||||||||||||||||||||||||||||||    
T  24339622 gacatggacattgacacgccgacacagctaataatttgaaaaaa---tcacataattcagtgtaattacaagtgtcggtgtcg 24339701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 83
Target Start/End: Original strand, 25791616 - 25791670
Alignment:
Q  29 tatgaagcacggatacggacacggacactgacacgctgacacagctaataatttg 83  Q
    |||||||||||||||||||||| ||||||||||||| ||||| |||||| |||||    
T  25791616 tatgaagcacggatacggacacagacactgacacgccgacaccgctaattatttg 25791670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 83
Target Start/End: Complemental strand, 12010057 - 12010022
Alignment:
Q  48 cacggacactgacacgctgacacagctaataatttg 83  Q
    ||||||||||||||||||||||||||||||||||||    
T  12010057 cacggacactgacacgctgacacagctaataatttg 12010022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 128
Target Start/End: Original strand, 18039023 - 18039058
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcg 128  Q
    ||||||||||||||||||||||||||||||||||||    
T  18039023 tcacataattcagtgtaattacaagtgtcggtgtcg 18039058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 128
Target Start/End: Original strand, 21560527 - 21560562
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcg 128  Q
    ||||||||||||||||||||||||||||||||||||    
T  21560527 tcacataattcagtgtaattacaagtgtcggtgtcg 21560562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 129
Target Start/End: Original strand, 21880178 - 21880212
Alignment:
Q  95 acataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    |||||||||||||||||||||||||||||||||||    
T  21880178 acataattcagtgtaattacaagtgtcggtgtcgg 21880212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 51 - 129
Target Start/End: Original strand, 25481887 - 25481962
Alignment:
Q  51 ggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    ||||| |||||||| ||||||||||||||||||         |||||||||||||||||||||||||||| ||||||||    
T  25481887 ggacaatgacacgccgacacagctaataatttgaaaaaa---tcacataattcagtgtaattacaagtgttggtgtcgg 25481962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 124
Target Start/End: Complemental strand, 26033557 - 26033465
Alignment:
Q  27 cctatgaagcacggatacggacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggt 124  Q
    |||||||| |||||||||||| || ||||| |||||  |||| ||||||||||||||         ||||||||||||||||||||||||||||||||    
T  26033557 cctatgaatcacggatacggatacagacacggacac--tgacgcagctaataatttgaaaaaa---tcacataattcagtgtaattacaagtgtcggt 26033465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 160
Target Start/End: Original strand, 28155596 - 28155668
Alignment:
Q  95 acataattcagtgtaattacaagtgtcggtgtcg-------ggacacgcctaatccgaggagtgtccgtgctt 160  Q
    ||||||||| ||||||||||||||||||||||||       ||||||||||||||| |||| |||||||||||    
T  28155596 acataattcggtgtaattacaagtgtcggtgtcggacaccaggacacgcctaatccaaggaatgtccgtgctt 28155668  T

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Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 160
Target Start/End: Complemental strand, 5409809 - 5409776
Alignment:
Q  127 cgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    ||||||||||||||||||||||||||||||||||    
T  5409809 cgggacacgcctaatccgaggagtgtccgtgctt 5409776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 127
Target Start/End: Complemental strand, 11061155 - 11061077
Alignment:
Q  46 gacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtc 127  Q
    ||||||||||||||||| | ||||||||||||||||||         |||||||||| ||| ||||||||||||||||||||    
T  11061155 gacacggacactgacacaccgacacagctaataatttg---aaaaaatcacataatttagtataattacaagtgtcggtgtc 11061077  T

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Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 83
Target Start/End: Original strand, 24105658 - 24105695
Alignment:
Q  46 gacacggacactgacacgctgacacagctaataatttg 83  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  24105658 gacacggacactgacacgccgacacagctaataatttg 24105695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 149
Target Start/End: Original strand, 3721117 - 3721172
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcgggacacgcctaatccgaggag 149  Q
    |||||||||| ||| |||||| | ||||||||||| |||||||||||||||||||||    
T  3721117 tcacataatttagtataattatatgtgtcggtgtc-ggacacgcctaatccgaggag 3721172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 83
Target Start/End: Original strand, 11072259 - 11072315
Alignment:
Q  27 cctatgaagcacggatacggacacggacactgacacgctgacacagctaataatttg 83  Q
    ||||||||||| ||||||||||||| |||| ||||||| ||||| | ||||||||||    
T  11072259 cctatgaagcatggatacggacacgaacacagacacgccgacaccgataataatttg 11072315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 83
Target Start/End: Complemental strand, 26019729 - 26019673
Alignment:
Q  27 cctatgaagcacggatacggacacggacactgacacgctgacacagctaataatttg 83  Q
    |||||||||||||||||||||||||||  ||||||||| | ||| |||| |||||||    
T  26019729 cctatgaagcacggatacggacacggatcctgacacgccggcaccgctagtaatttg 26019673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 83
Target Start/End: Original strand, 32308081 - 32308137
Alignment:
Q  27 cctatgaagcacggatacggacacggacactgacacgctgacacagctaataatttg 83  Q
    ||||||||||||  ||||| ||| |||||||||||||| ||||| ||||||||||||    
T  32308081 cctatgaagcacaaatacgaacatggacactgacacgccgacaccgctaataatttg 32308137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 128
Target Start/End: Original strand, 2334274 - 2334309
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcg 128  Q
    |||||||||| |||||||||||||||||||||||||    
T  2334274 tcacataatttagtgtaattacaagtgtcggtgtcg 2334309  T

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Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 128
Target Start/End: Original strand, 3991348 - 3991383
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcg 128  Q
    |||||||||||||| |||||||||||||||||||||    
T  3991348 tcacataattcagtataattacaagtgtcggtgtcg 3991383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 128
Target Start/End: Complemental strand, 9408369 - 9408334
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcg 128  Q
    |||||||||| |||||||||||||||||||||||||    
T  9408369 tcacataatttagtgtaattacaagtgtcggtgtcg 9408334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 128
Target Start/End: Original strand, 9778524 - 9778559
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcg 128  Q
    |||||||||||||| |||||||||||||||||||||    
T  9778524 tcacataattcagtataattacaagtgtcggtgtcg 9778559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 128
Target Start/End: Complemental strand, 11272617 - 11272586
Alignment:
Q  97 ataattcagtgtaattacaagtgtcggtgtcg 128  Q
    ||||||||||||||||||||||||||||||||    
T  11272617 ataattcagtgtaattacaagtgtcggtgtcg 11272586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 128
Target Start/End: Original strand, 13770671 - 13770750
Alignment:
Q  46 gacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtcg 128  Q
    |||||||||||||| |||| |||||||||||||||||          | |||||||||||||||||||||||||||| |||||    
T  13770671 gacacggacactgatacgccgacacagctaataattt---aaaaaaattacataattcagtgtaattacaagtgtcgttgtcg 13770750  T

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Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 160
Target Start/End: Complemental strand, 29763165 - 29763134
Alignment:
Q  129 ggacacgcctaatccgaggagtgtccgtgctt 160  Q
    ||||||||||||||||||||||||||||||||    
T  29763165 ggacacgcctaatccgaggagtgtccgtgctt 29763134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 128
Target Start/End: Complemental strand, 32094055 - 32094020
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcg 128  Q
    |||||||||||||||||||||||| |||||||||||    
T  32094055 tcacataattcagtgtaattacaaatgtcggtgtcg 32094020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 160
Target Start/End: Original strand, 35862034 - 35862065
Alignment:
Q  129 ggacacgcctaatccgaggagtgtccgtgctt 160  Q
    ||||||||||||||||||||||||||||||||    
T  35862034 ggacacgcctaatccgaggagtgtccgtgctt 35862065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 127
Target Start/End: Original strand, 7438730 - 7438764
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtc 127  Q
    |||||||||||| ||||||||||||||||||||||    
T  7438730 tcacataattcaatgtaattacaagtgtcggtgtc 7438764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 11665536 - 11665482
Alignment:
Q  30 atgaagcacggatacggacac-ggacactgacacgctgacacagctaataatttg 83  Q
    |||||| |||||||||||||| ||| | ||||||||||||||| |||||||||||    
T  11665536 atgaagaacggatacggacactggatattgacacgctgacacaactaataatttg 11665482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 62
Target Start/End: Original strand, 19213773 - 19213807
Alignment:
Q  28 ctatgaagcacggatacggacacggacactgacac 62  Q
    ||||||||||||||| |||||||||||||||||||    
T  19213773 ctatgaagcacggatgcggacacggacactgacac 19213807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 160
Target Start/End: Complemental strand, 28973920 - 28973886
Alignment:
Q  126 tcgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    |||||||||||||||||||||| ||||||||||||    
T  28973920 tcgggacacgcctaatccgaggtgtgtccgtgctt 28973886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 127
Target Start/End: Original strand, 33994236 - 33994270
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtc 127  Q
    ||||||||||||||| |||||||||||||||||||    
T  33994236 tcacataattcagtgcaattacaagtgtcggtgtc 33994270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 160
Target Start/End: Original strand, 598289 - 598322
Alignment:
Q  127 cgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    |||||||||||||||||||| |||||||||||||    
T  598289 cgggacacgcctaatccgagaagtgtccgtgctt 598322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 160
Target Start/End: Original strand, 6490797 - 6490830
Alignment:
Q  127 cgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    |||||||||| |||||||||||||||||||||||    
T  6490797 cgggacacgcttaatccgaggagtgtccgtgctt 6490830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 160
Target Start/End: Complemental strand, 8842317 - 8842284
Alignment:
Q  127 cgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    ||||||||||||||||| ||||||||||||||||    
T  8842317 cgggacacgcctaatccaaggagtgtccgtgctt 8842284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 160
Target Start/End: Original strand, 9778586 - 9778619
Alignment:
Q  127 cgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    ||||||||||||||||| ||||||||||||||||    
T  9778586 cgggacacgcctaatccaaggagtgtccgtgctt 9778619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 160
Target Start/End: Original strand, 24339734 - 24339767
Alignment:
Q  127 cgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    ||||||||||||||||||||||||| ||||||||    
T  24339734 cgggacacgcctaatccgaggagtgcccgtgctt 24339767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 128
Target Start/End: Original strand, 25822685 - 25822714
Alignment:
Q  99 aattcagtgtaattacaagtgtcggtgtcg 128  Q
    ||||||||||||||||||||||||||||||    
T  25822685 aattcagtgtaattacaagtgtcggtgtcg 25822714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 160
Target Start/End: Complemental strand, 29812636 - 29812603
Alignment:
Q  127 cgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    |||||||||||||||||||| |||||||||||||    
T  29812636 cgggacacgcctaatccgagaagtgtccgtgctt 29812603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 160
Target Start/End: Original strand, 30813882 - 30813911
Alignment:
Q  131 acacgcctaatccgaggagtgtccgtgctt 160  Q
    ||||||||||||||||||||||||||||||    
T  30813882 acacgcctaatccgaggagtgtccgtgctt 30813911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 160
Target Start/End: Complemental strand, 32287441 - 32287408
Alignment:
Q  127 cgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    |||||||| |||||||||||||||||||||||||    
T  32287441 cgggacacacctaatccgaggagtgtccgtgctt 32287408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 37742486 - 37742539
Alignment:
Q  29 tatgaagcacggatacggacacggacactgacacgctgacacagctaataattt 82  Q
    |||||| ||||||||| ||||||||||||| ||||| |||||  ||||||||||    
T  37742486 tatgaaacacggatacagacacggacactgccacgccgacaccactaataattt 37742539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 160
Target Start/End: Complemental strand, 40287340 - 40287307
Alignment:
Q  127 cgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    ||||||| ||||||||||||||||||||||||||    
T  40287340 cgggacatgcctaatccgaggagtgtccgtgctt 40287307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 160
Target Start/End: Complemental strand, 43027442 - 43027409
Alignment:
Q  127 cgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    ||||||||||||||||||| ||||||||||||||    
T  43027442 cgggacacgcctaatccgatgagtgtccgtgctt 43027409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 160
Target Start/End: Original strand, 3991395 - 3991427
Alignment:
Q  128 gggacacgcctaatccgaggagtgtccgtgctt 160  Q
    |||||||||||||||||||||||||||| ||||    
T  3991395 gggacacgcctaatccgaggagtgtccgggctt 3991427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 56
Target Start/End: Original strand, 9778452 - 9778480
Alignment:
Q  28 ctatgaagcacggatacggacacggacac 56  Q
    |||||||||||||||||||||||||||||    
T  9778452 ctatgaagcacggatacggacacggacac 9778480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 129
Target Start/End: Original strand, 19213827 - 19213863
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    ||||||||| |||||||| ||||||||||||||||||    
T  19213827 tcacataatgcagtgtaaatacaagtgtcggtgtcgg 19213863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 160
Target Start/End: Complemental strand, 32093991 - 32093959
Alignment:
Q  128 gggacacgcctaatccgaggagtgtccgtgctt 160  Q
    ||||||||||||||||||||||||| |||||||    
T  32093991 gggacacgcctaatccgaggagtgttcgtgctt 32093959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 3e-19; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 93 - 160
Target Start/End: Complemental strand, 21257021 - 21256953
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcg-ggacacgcctaatccgaggagtgtccgtgctt 160  Q
    |||||||||||||| ||||||||||||||||| ||| |||||| |||||||||||||||||||||||||    
T  21257021 tcacataattcagtataattacaagtgtcggtatcgtggacacacctaatccgaggagtgtccgtgctt 21256953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 93 - 156
Target Start/End: Original strand, 7928474 - 7928536
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcgggacacgcctaatccgaggagtgtccgt 156  Q
    ||||||||||||||||||||| | ||||||||||| |||||||||||||| |||||||||||||    
T  7928474 tcacataattcagtgtaattatatgtgtcggtgtc-ggacacgcctaatctgaggagtgtccgt 7928536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 40052295 - 40052349
Alignment:
Q  28 ctatgaagcacggatacggacacggacactgacacgctgacacagctaataatttg 83  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  40052295 ctatgaagcacggatacggacacg-acactgacacgccgacacagctaataatttg 40052349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 125
Target Start/End: Original strand, 26508067 - 26508166
Alignment:
Q  28 ctatgaagcacggatacggacacg-----gacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcg 122  Q
    |||||||| |||||||||||||||     || |||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||    
T  26508067 ctatgaagaacggatacggacacgatacagatactgacacgctgacacagctaataatttgaaaaaa---tcacataattcagtgtaattacaagtgtcg 26508163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 29 - 126
Target Start/End: Original strand, 20503429 - 20503522
Alignment:
Q  29 tatgaagcacggatacggacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgt 126  Q
    |||||||||||||||||||||| ||||||||||||| |||||| | |||||||||         | ||||||||||||||||||||||||||||||||    
T  20503429 tatgaagcacggatacggacac-gacactgacacgccgacacaacaaataatttg---aaaaaatgacataattcagtgtaattacaagtgtcggtgt 20503522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 33359722 - 33359778
Alignment:
Q  28 ctatgaagcacggatac-ggacacggacactgacacgctgacacagctaataatttg 83  Q
    |||||||||||||| || |||||| ||||||||||||||||||||||||||||||||    
T  33359722 ctatgaagcacggacaccggacacagacactgacacgctgacacagctaataatttg 33359778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 128
Target Start/End: Original strand, 28917981 - 28918060
Alignment:
Q  46 gacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtcg 128  Q
    |||||||| |||||||||| |||| |||||||||||||         ||||||||||||||||||||||||||||||||||||    
T  28917981 gacacggaaactgacacgccgacatagctaataatttgaaaaaa---tcacataattcagtgtaattacaagtgtcggtgtcg 28918060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 160
Target Start/End: Complemental strand, 10335365 - 10335250
Alignment:
Q  46 gacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtcgg----gacacgcctaat 141  Q
    ||||||||||||||||||| |||||| |||||||||||         ||||||| || ||||||| ||||||||||||||||||    ||||||||||||    
T  10335365 gacacggacactgacacgccgacacaactaataatttgaaaaag---tcacatattttagtgtaaatacaagtgtcggtgtcgggcacgacacgcctaat 10335269  T
Q  142 ccgaggagtgtccgtgctt 160  Q
      ||||||||| |||||||    
T  10335268 tggaggagtgttcgtgctt 10335250  T

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Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 129
Target Start/End: Original strand, 10954930 - 10955012
Alignment:
Q  44 cggacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    |||||||| |||||||||||| |||||| |||||||||||         ||||||||||||||||||| |||||||||||||||||    
T  10954930 cggacacgaacactgacacgccgacacaactaataatttgaaaaaa---tcacataattcagtgtaatcacaagtgtcggtgtcgg 10955012  T

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Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 128
Target Start/End: Original strand, 28812477 - 28812574
Alignment:
Q  28 ctatgaagcacggatacggaca-cggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgt 126  Q
    ||||||||||||||||| |||| ||||||| ||||||| |||||| |||||||||||         ||||||||||||||||| ||||||||||||||||    
T  28812477 ctatgaagcacggatacagacaacggacac-gacacgccgacacaactaataatttgaagaaa---tcacataattcagtgtagttacaagtgtcggtgt 28812572  T

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Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 128
Target Start/End: Original strand, 34910279 - 34910376
Alignment:
Q  28 ctatgaagcacggatacggacacg-gacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgt 126  Q
    |||||||||||||||||||||||  ||||| ||||||| |||||| |||||||||||         ||||||||||||||||||||||||| ||||||||    
T  34910279 ctatgaagcacggatacggacaccagacac-gacacgccgacacaactaataatttgaaaaaa---tcacataattcagtgtaattacaagagtcggtgt 34910374  T

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Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 35994773 - 35994709
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcgggacacgcctaatccgaggagtgtccgtgcttt 161  Q
    ||||||||||||||||||||||||||||| ||||| |||||||  |||||||| |||||||||||||||    
T  35994773 tcacataattcagtgtaattacaagtgtc-gtgtc-ggacacg--taatccgaagagtgtccgtgcttt 35994709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 83
Target Start/End: Complemental strand, 10318116 - 10318076
Alignment:
Q  43 acggacacggacactgacacgctgacacagctaataatttg 83  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  10318116 acggacacggacactgacacgccgacacagctaataatttg 10318076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 129
Target Start/End: Original strand, 25775533 - 25775569
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    |||||||||||||||||||||||||||||||||||||    
T  25775533 tcacataattcagtgtaattacaagtgtcggtgtcgg 25775569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 129
Target Start/End: Complemental strand, 8587100 - 8587020
Alignment:
Q  46 gacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    ||||||||||||||||||| |||||| ||| |||||||         |||||||||| ||||||||||||||||||||||||||    
T  8587100 gacacggacactgacacgccgacacatctagtaatttgaaaaaa---tcacataattaagtgtaattacaagtgtcggtgtcgg 8587020  T

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Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 129
Target Start/End: Original strand, 55401055 - 55401135
Alignment:
Q  46 gacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    |||||||||||||| |||| |||||| |||||||||||         |||||||||| ||||||||||||||||||||||||||    
T  55401055 gacacggacactgatacgccgacacaactaataatttgaaaaaa---tcacataatttagtgtaattacaagtgtcggtgtcgg 55401135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 128
Target Start/End: Original strand, 14209079 - 14209172
Alignment:
Q  31 tgaagcacggatacggacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtcg 128  Q
    |||||||||||| ||||||| ||||| ||||||| |||||| ||||||||||          ||||||||||||||||||||||||||||| ||||||    
T  14209079 tgaagcacggatgcggacacagacac-gacacgccgacacaactaataattt---taaaaaatcacataattcagtgtaattacaagtgtcagtgtcg 14209172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 128
Target Start/End: Original strand, 14829670 - 14829748
Alignment:
Q  46 gacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtcg 128  Q
    ||||| ||||||||||||| ||||||||||||||||||         ||||||||||||  ||||||||||||||||||||||    
T  14829670 gacacagacactgacacgccgacacagctaataatttg----aaaaatcacataattcatggtaattacaagtgtcggtgtcg 14829748  T

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Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 83
Target Start/End: Complemental strand, 3865635 - 3865598
Alignment:
Q  46 gacacggacactgacacgctgacacagctaataatttg 83  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  3865635 gacacggacactgacacgccgacacagctaataatttg 3865598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 160
Target Start/End: Original strand, 20503546 - 20503579
Alignment:
Q  127 cgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    ||||||||||||||||||||||||||||||||||    
T  20503546 cgggacacgcctaatccgaggagtgtccgtgctt 20503579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 129
Target Start/End: Original strand, 21479104 - 21479178
Alignment:
Q  52 gacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    ||||||||||||| ||||||||||||||||||         ||||| |||||||||||||||| ||||||||||||||    
T  21479104 gacactgacacgccgacacagctaataatttgaaaaaa---tcacacaattcagtgtaattactagtgtcggtgtcgg 21479178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 160
Target Start/End: Complemental strand, 34185090 - 34185057
Alignment:
Q  127 cgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    ||||||||||||||||||||||||||||||||||    
T  34185090 cgggacacgcctaatccgaggagtgtccgtgctt 34185057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 4987363 - 4987294
Alignment:
Q  53 acactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtg 125  Q
    |||||||||||| ||||||||||||||||||         |||||||||||||||||||||||||||| ||||    
T  4987363 acactgacacgccgacacagctaataatttgaaaaaa---tcacataattcagtgtaattacaagtgttggtg 4987294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 129
Target Start/End: Original strand, 8593161 - 8593197
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    |||||||||||||| ||||||||||||||||||||||    
T  8593161 tcacataattcagtataattacaagtgtcggtgtcgg 8593197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 129
Target Start/End: Complemental strand, 51206388 - 51206352
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    |||||||||||||||||| ||||||||||||||||||    
T  51206388 tcacataattcagtgtaaatacaagtgtcggtgtcgg 51206352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 128
Target Start/End: Original strand, 1509563 - 1509598
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcg 128  Q
    |||||||||| |||||||||||||||||||||||||    
T  1509563 tcacataatttagtgtaattacaagtgtcggtgtcg 1509598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 160
Target Start/End: Complemental strand, 4990948 - 4990917
Alignment:
Q  129 ggacacgcctaatccgaggagtgtccgtgctt 160  Q
    ||||||||||||||||||||||||||||||||    
T  4990948 ggacacgcctaatccgaggagtgtccgtgctt 4990917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 83
Target Start/End: Complemental strand, 6525773 - 6525722
Alignment:
Q  32 gaagcacggatacggacacggacactgacacgctgacacagctaataatttg 83  Q
    |||||||||||||||||||| ||||||||| |  ||||| ||||||||||||    
T  6525773 gaagcacggatacggacacgtacactgacatgtcgacaccgctaataatttg 6525722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 129
Target Start/End: Original strand, 8383237 - 8383317
Alignment:
Q  46 gacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    |||||||||| |||||||| ||||| ||||||||||||         ||| ||||||||||||||||| |||||||||||||||    
T  8383237 gacacggacattgacacgccgacaccgctaataatttgagaaaa---tcatataattcagtgtaattataagtgtcggtgtcgg 8383317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 127
Target Start/End: Complemental strand, 22774167 - 22774071
Alignment:
Q  28 ctatgaagcacggatacggacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtc 127  Q
    ||||||||||||||||||||||| ||||| ||||||  |||||  ||||||||| |         ||||||| ||||||||||||| |||||||||||||    
T  22774167 ctatgaagcacggatacggacacagacacagacacgtcgacaccactaataattag---acaaagtcacatatttcagtgtaattataagtgtcggtgtc 22774071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 129
Target Start/End: Complemental strand, 26492284 - 26492204
Alignment:
Q  46 gacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    ||||||||||||||||||| |||| |||||||||||||         ||| | |||||||||||||||||||| ||||||||||    
T  26492284 gacacggacactgacacgccgacagagctaataatttg---aaaaaatcatacaattcagtgtaattacaagtatcggtgtcgg 26492204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 128
Target Start/End: Original strand, 27505270 - 27505305
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcg 128  Q
    |||||||||| |||||||||||||||||||||||||    
T  27505270 tcacataattaagtgtaattacaagtgtcggtgtcg 27505305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 128
Target Start/End: Complemental strand, 34185158 - 34185123
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcg 128  Q
    ||||| ||||||||||||||||||||||||||||||    
T  34185158 tcacacaattcagtgtaattacaagtgtcggtgtcg 34185123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 37077320 - 37077375
Alignment:
Q  28 ctatgaagcacggatacggacacggacactgacacgctgacacagctaataatttg 83  Q
    ||||||||||||||||  |||||||||| |||||||| ||||| | ||||||||||    
T  37077320 ctatgaagcacggataaagacacggacagtgacacgccgacaccgataataatttg 37077375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 128
Target Start/End: Complemental strand, 49651821 - 49651786
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcg 128  Q
    |||||||||||| |||||||||||||||||||||||    
T  49651821 tcacataattcactgtaattacaagtgtcggtgtcg 49651786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 127
Target Start/End: Original strand, 3865698 - 3865732
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtc 127  Q
    |||||||||||||| ||||||||||||||||||||    
T  3865698 tcacataattcagtataattacaagtgtcggtgtc 3865732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 160
Target Start/End: Complemental strand, 8789523 - 8789493
Alignment:
Q  130 gacacgcctaatccgaggagtgtccgtgctt 160  Q
    |||||||||||||||||||||||||||||||    
T  8789523 gacacgcctaatccgaggagtgtccgtgctt 8789493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 160
Target Start/End: Original strand, 8842413 - 8842443
Alignment:
Q  130 gacacgcctaatccgaggagtgtccgtgctt 160  Q
    |||||||||||||||||||||||||||||||    
T  8842413 gacacgcctaatccgaggagtgtccgtgctt 8842443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 160
Target Start/End: Original strand, 11610589 - 11610623
Alignment:
Q  126 tcgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    ||||||||||||||||| |||||||||||||||||    
T  11610589 tcgggacacgcctaatctgaggagtgtccgtgctt 11610623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 62
Target Start/End: Complemental strand, 13845614 - 13845580
Alignment:
Q  28 ctatgaagcacggatacggacacggacactgacac 62  Q
    ||||||||||||||||||||||||||||| |||||    
T  13845614 ctatgaagcacggatacggacacggacaccgacac 13845580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 129
Target Start/End: Complemental strand, 16000049 - 16000015
Alignment:
Q  95 acataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    |||||||||||||||| ||||||||||||||||||    
T  16000049 acataattcagtgtaactacaagtgtcggtgtcgg 16000015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 160
Target Start/End: Complemental strand, 25948922 - 25948851
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcg----ggacacgcctaatccgaggagtgtccgtgctt 160  Q
    ||||||||||||||||||||| |||||| |||||||    |||||||  |||||| |||| |||||||||||    
T  25948922 tcacataattcagtgtaattataagtgttggtgtcgtgtcggacacgtgtaatccaaggaatgtccgtgctt 25948851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 129
Target Start/End: Complemental strand, 40993432 - 40993334
Alignment:
Q  28 ctatgaagcacggatacggacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtc 127  Q
    |||||||||||||||||||||||| |||| |||||   ||||| |||||||||||          ||||||||||||||||||||| | |||||||||||    
T  40993432 ctatgaagcacggatacggacacg-acacggacacctcgacaccgctaataattt--aaaaaaaatcacataattcagtgtaattatatgtgtcggtgtc 40993336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 160
Target Start/End: Original strand, 55401159 - 55401189
Alignment:
Q  130 gacacgcctaatccgaggagtgtccgtgctt 160  Q
    |||||||||||||||||||||||||||||||    
T  55401159 gacacgcctaatccgaggagtgtccgtgctt 55401189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 56
Target Start/End: Complemental strand, 750735 - 750706
Alignment:
Q  27 cctatgaagcacggatacggacacggacac 56  Q
    ||||||||||||||||||||||||||||||    
T  750735 cctatgaagcacggatacggacacggacac 750706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 1852600 - 1852641
Alignment:
Q  29 tatgaagcacggatacggacacggacactgacacgctgacac 70  Q
    |||||||||||||||| || |||||||| |||||||||||||    
T  1852600 tatgaagcacggatacagatacggacacggacacgctgacac 1852641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 156
Target Start/End: Complemental strand, 4987258 - 4987229
Alignment:
Q  127 cgggacacgcctaatccgaggagtgtccgt 156  Q
    ||||||||||||||||||||||||||||||    
T  4987258 cgggacacgcctaatccgaggagtgtccgt 4987229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 128
Target Start/End: Complemental strand, 4991000 - 4990967
Alignment:
Q  95 acataattcagtgtaattacaagtgtcggtgtcg 128  Q
    ||||||||||||||||||||||||||||| ||||    
T  4991000 acataattcagtgtaattacaagtgtcggcgtcg 4990967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 83
Target Start/End: Original strand, 14979137 - 14979198
Alignment:
Q  27 cctatgaagcacggatacggacac-----ggacactgacacgctgacacagctaataatttg 83  Q
    ||||||||||||||||||||||||     ||||| || ||||| ||||||||||||||||||    
T  14979137 cctatgaagcacggatacggacacgacaaggacaatggcacgccgacacagctaataatttg 14979198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 160
Target Start/End: Original strand, 14979230 - 14979263
Alignment:
Q  127 cgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    |||||||||||||| |||||||||||||||||||    
T  14979230 cgggacacgcctaacccgaggagtgtccgtgctt 14979263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 160
Target Start/End: Original strand, 27505332 - 27505365
Alignment:
Q  127 cgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    ||||||| ||||||||||||||||||||||||||    
T  27505332 cgggacatgcctaatccgaggagtgtccgtgctt 27505365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 160
Target Start/End: Original strand, 34910398 - 34910431
Alignment:
Q  127 cgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    ||||||||| ||||||||||||||||||||||||    
T  34910398 cgggacacgtctaatccgaggagtgtccgtgctt 34910431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 160
Target Start/End: Original strand, 40052393 - 40052426
Alignment:
Q  127 cgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    |||||||||||||||||||||||||| |||||||    
T  40052393 cgggacacgcctaatccgaggagtgttcgtgctt 40052426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 160
Target Start/End: Complemental strand, 40993313 - 40993280
Alignment:
Q  127 cgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    |||||||||||||||||||||||||||| |||||    
T  40993313 cgggacacgcctaatccgaggagtgtccatgctt 40993280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 56
Target Start/End: Original strand, 14027959 - 14027987
Alignment:
Q  28 ctatgaagcacggatacggacacggacac 56  Q
    |||||||||||||||||||||||||||||    
T  14027959 ctatgaagcacggatacggacacggacac 14027987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 83
Target Start/End: Original strand, 21720741 - 21720781
Alignment:
Q  43 acggacacggacactgacacgctgacacagctaataatttg 83  Q
    |||||||||||||||||||||| ||||| | ||||||||||    
T  21720741 acggacacggacactgacacgccgacaccgataataatttg 21720781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 56
Target Start/End: Complemental strand, 23870650 - 23870622
Alignment:
Q  28 ctatgaagcacggatacggacacggacac 56  Q
    |||||||||||||||||||||||||||||    
T  23870650 ctatgaagcacggatacggacacggacac 23870622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 123
Target Start/End: Original strand, 35312080 - 35312108
Alignment:
Q  95 acataattcagtgtaattacaagtgtcgg 123  Q
    |||||||||||||||||||||||||||||    
T  35312080 acataattcagtgtaattacaagtgtcgg 35312108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 160
Target Start/End: Complemental strand, 41961616 - 41961584
Alignment:
Q  128 gggacacgcctaatccgaggagtgtccgtgctt 160  Q
    ||||||||||||||||||| |||||||||||||    
T  41961616 gggacacgcctaatccgagaagtgtccgtgctt 41961584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 56
Target Start/End: Original strand, 45451523 - 45451551
Alignment:
Q  28 ctatgaagcacggatacggacacggacac 56  Q
    |||||||||||||||||||||||||||||    
T  45451523 ctatgaagcacggatacggacacggacac 45451551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 39 - 120
Target Start/End: Original strand, 51784 - 51862
Alignment:
Q  39 ggatacggacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgt 120  Q
    |||||||||||||||||||||||||| ||||||||||||||||||         ||||||||||||||||||||||||||||    
T  51784 ggatacggacacggacactgacacgccgacacagctaataatttg---aaaaaatcacataattcagtgtaattacaagtgt 51862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 27 - 128
Target Start/End: Original strand, 23729 - 23829
Alignment:
Q  27 cctatgaagcacggatacggacac-ggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtg 125  Q
    |||||||| |||||||||| |||| |||||||||||| ||| ||||| ||||||||||         |||||||||||||||||||||||||||||||||    
T  23729 cctatgaaacacggatacgaacaccggacactgacacactgtcacagttaataatttgaaaaaaa--tcacataattcagtgtaattacaagtgtcggtg 23826  T
Q  126 tcg 128  Q
    |||    
T  23827 tcg 23829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 20152 - 20261
Alignment:
Q  46 gacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtc--------gggacacgcc 137  Q
    |||||||||| |||||||| ||||||||||||||||||         ||||||||||||||||||||||||||||| |||||        ||||||||||    
T  20152 gacacggacaatgacacgccgacacagctaataatttgaaaaaa---tcacataattcagtgtaattacaagtgtcagtgtcgtgtcggtgggacacgcc 20248  T
Q  138 taatccgaggagt 150  Q
    |||||||||||||    
T  20249 taatccgaggagt 20261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 129
Target Start/End: Original strand, 13380 - 13460
Alignment:
Q  46 gacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    ||||||||||||||||||| |||||| |||||||||||         ||||||||||||||| ||||||||| |||||||||||    
T  13380 gacacggacactgacacgccgacacaactaataatttg---agaaaatcacataattcagtgcaattacaagggtcggtgtcgg 13460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 129
Target Start/End: Complemental strand, 21947 - 21867
Alignment:
Q  46 gacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    ||||||||||||||||||| |||||| |||||||||||         ||||||||||||||| ||||||||| |||||||||||    
T  21947 gacacggacactgacacgccgacacaactaataatttg---agaaaatcacataattcagtgcaattacaagggtcggtgtcgg 21867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 129
Target Start/End: Original strand, 8778 - 8858
Alignment:
Q  46 gacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    ||||||||||||||||||| ||||||||||||||||||         ||| || ||| ||||||||||||||||||||||||||    
T  8778 gacacggacactgacacgccgacacagctaataatttg---aaaaaatcatattatttagtgtaattacaagtgtcggtgtcgg 8858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 36; Significance: 0.00000000002; HSPs: 4)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 127
Target Start/End: Original strand, 123612 - 123686
Alignment:
Q  53 acactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtc 127  Q
    ||||||||||||  ||||||||||||||||          |||||||||||||||||||||||||||||||||||    
T  123612 acactgacacgccaacacagctaataatttaaaaaaagaatcacataattcagtgtaattacaagtgtcggtgtc 123686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 160
Target Start/End: Original strand, 92905 - 92936
Alignment:
Q  129 ggacacgcctaatccgaggagtgtccgtgctt 160  Q
    ||||||||||||||||||||||||||||||||    
T  92905 ggacacgcctaatccgaggagtgtccgtgctt 92936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 121
Target Start/End: Original strand, 92784 - 92859
Alignment:
Q  43 acggacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtc 121  Q
    ||||| |||||||||||||||| ||||| ||||||||||||         | |||||||||||||||||||||||||||    
T  92784 acggatacggacactgacacgccgacaccgctaataatttg---agaaaattacataattcagtgtaattacaagtgtc 92859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 128
Target Start/End: Original strand, 83186 - 83219
Alignment:
Q  95 acataattcagtgtaattacaagtgtcggtgtcg 128  Q
    |||||||||||||||||||||| |||||||||||    
T  83186 acataattcagtgtaattacaaatgtcggtgtcg 83219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 129
Target Start/End: Complemental strand, 45563 - 45529
Alignment:
Q  95 acataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    |||||||||||||||||||||||||||||||||||    
T  45563 acataattcagtgtaattacaagtgtcggtgtcgg 45529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 128
Target Start/End: Original strand, 241574 - 241653
Alignment:
Q  46 gacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtcg 128  Q
    ||||||||||||||||||| ||||||||||||||||||         |||||||||| ||||||||||  |||||||||||||    
T  241574 gacacggacactgacacgccgacacagctaataatttg---gaaaaatcacataatttagtgtaattatgagtgtcggtgtcg 241653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 160
Target Start/End: Original strand, 241686 - 241719
Alignment:
Q  127 cgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    |||||||||||||||||||| |||||||||||||    
T  241686 cgggacacgcctaatccgagaagtgtccgtgctt 241719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 129
Target Start/End: Complemental strand, 539 - 461
Alignment:
Q  48 cacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    |||||||||||| |||| ||||| ||||||||||||         ||||| |||||||||||||||||||||||||||||||    
T  539 cacggacactgatacgccgacactgctaataatttgaaaaaa---tcacaaaattcagtgtaattacaagtgtcggtgtcgg 461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 160
Target Start/End: Complemental strand, 440 - 407
Alignment:
Q  127 cgggacacgcctaatccgaggagtgtccgtgctt 160  Q
    |||||||| |||||||||||||||||||||||||    
T  440 cgggacacacctaatccgaggagtgtccgtgctt 407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 160
Target Start/End: Complemental strand, 4858 - 4826
Alignment:
Q  128 gggacacgcctaatccgaggagtgtccgtgctt 160  Q
    |||||||||||||||||||||||||||||||||    
T  4858 gggacacgcctaatccgaggagtgtccgtgctt 4826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 127
Target Start/End: Complemental strand, 4918 - 4884
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtc 127  Q
    |||||||||||||||||||||||||||| ||||||    
T  4918 tcacataattcagtgtaattacaagtgttggtgtc 4884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 160
Target Start/End: Original strand, 3390 - 3422
Alignment:
Q  128 gggacacgcctaatccgaggagtgtccgtgctt 160  Q
    |||||||||||||||||||||||||||||||||    
T  3390 gggacacgcctaatccgaggagtgtccgtgctt 3422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 125
Target Start/End: Original strand, 130506 - 130538
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtg 125  Q
    |||||||||||||||||||||||||||||||||    
T  130506 tcacataattcagtgtaattacaagtgtcggtg 130538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 128
Target Start/End: Original strand, 23444 - 23479
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcg 128  Q
    ||||||||||||||||||||| ||||||||||||||    
T  23444 tcacataattcagtgtaattataagtgtcggtgtcg 23479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 56
Target Start/End: Original strand, 23371 - 23399
Alignment:
Q  28 ctatgaagcacggatacggacacggacac 56  Q
    |||||||||||||||||||||||||||||    
T  23371 ctatgaagcacggatacggacacggacac 23399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 128
Target Start/End: Complemental strand, 3884 - 3849
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtcg 128  Q
    ||||||||||||||||||||||||||||| ||||||    
T  3884 tcacataattcagtgtaattacaagtgtcagtgtcg 3849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 127
Target Start/End: Complemental strand, 178898 - 178819
Alignment:
Q  46 gacacggacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtcggtgtc 127  Q
    ||||||||||||||||||| |||||| |||||||||||         |  |||||||||||||||||||||||||| |||||    
T  178898 gacacggacactgacacgccgacacaactaataatttgaaaaaatcat--cataattcagtgtaattacaagtgtcagtgtc 178819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 129
Target Start/End: Original strand, 70304 - 70338
Alignment:
Q  95 acataattcagtgtaattacaagtgtcggtgtcgg 129  Q
    ||||||||||||||||||| |||||||||||||||    
T  70304 acataattcagtgtaattataagtgtcggtgtcgg 70338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 128
Target Start/End: Original strand, 71679 - 71784
Alignment:
Q  28 ctatgaagcacggatacggaca-cg-----gacactgacacgctgacacagctaataatttgnnnnnnnnntcacataattcagtgtaattacaagtgtc 121  Q
    |||||||||||||||||||||| ||     ||||||||||||| ||||||||||||||||||         ||||| |||||||||||||||| ||||||    
T  71679 ctatgaagcacggatacggacatcggacacgacactgacacgccgacacagctaataatttg-aaaaaaaatcacacaattcagtgtaattactagtgtc 71777  T
Q  122 ggtgtcg 128  Q
     ||||||    
T  71778 agtgtcg 71784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 127
Target Start/End: Complemental strand, 17784 - 17750
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtgtc 127  Q
    |||||||||| ||||||||||||||||||||||||    
T  17784 tcacataatttagtgtaattacaagtgtcggtgtc 17750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 56
Target Start/End: Original strand, 9841 - 9870
Alignment:
Q  27 cctatgaagcacggatacggacacggacac 56  Q
    ||||||||||||||||||||||||||||||    
T  9841 cctatgaagcacggatacggacacggacac 9870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 56
Target Start/End: Original strand, 63708 - 63737
Alignment:
Q  27 cctatgaagcacggatacggacacggacac 56  Q
    ||||||||||||||||||||||||||||||    
T  63708 cctatgaagcacggatacggacacggacac 63737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 127
Target Start/End: Original strand, 63799 - 63831
Alignment:
Q  95 acataattcagtgtaattacaagtgtcggtgtc 127  Q
    ||||||||||||| |||||||||||||||||||    
T  63799 acataattcagtgcaattacaagtgtcggtgtc 63831  T

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Target: scaffold0009 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 158
Target Start/End: Original strand, 188483 - 188512
Alignment:
Q  129 ggacacgcctaatccgaggagtgtccgtgc 158  Q
    ||||||||||||||||||||||||||||||    
T  188483 ggacacgcctaatccgaggagtgtccgtgc 188512  T

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Target: scaffold0007 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 83
Target Start/End: Complemental strand, 225347 - 225310
Alignment:
Q  46 gacacggacactgacacgctgacacagctaataatttg 83  Q
    ||||||||||||||||||| ||||||| ||||||||||    
T  225347 gacacggacactgacacgccgacacagataataatttg 225310  T

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Target: scaffold0086 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 83
Target Start/End: Original strand, 2900 - 2940
Alignment:
Q  43 acggacacggacactgacacgctgacacagctaataatttg 83  Q
    ||||| ||||||||||||||||| ||| |||||||||||||    
T  2900 acggatacggacactgacacgctaacatagctaataatttg 2940  T

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Target: scaffold0086; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 159
Target Start/End: Original strand, 3024 - 3052
Alignment:
Q  131 acacgcctaatccgaggagtgtccgtgct 159  Q
    |||||||||||||||||||||||||||||    
T  3024 acacgcctaatccgaggagtgtccgtgct 3052  T

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Target: scaffold0044 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 125
Target Start/End: Original strand, 53204 - 53236
Alignment:
Q  93 tcacataattcagtgtaattacaagtgtcggtg 125  Q
    ||||||||||||||||||||| |||||||||||    
T  53204 tcacataattcagtgtaattataagtgtcggtg 53236  T

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