View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17409_high_3 (Length: 386)

Name: NF17409_high_3
Description: NF17409
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17409_high_3
NF17409_high_3
[»] chr6 (47 HSPs)
chr6 (15-360)||(19704825-19705163)
chr6 (113-360)||(18317753-18317998)
chr6 (15-360)||(2629141-2629477)
chr6 (161-360)||(5275727-5275926)
chr6 (15-360)||(12195771-12196102)
chr6 (113-360)||(30034949-30035194)
chr6 (113-360)||(30966925-30967170)
chr6 (114-360)||(26932913-26933156)
chr6 (113-360)||(17011781-17012017)
chr6 (113-354)||(17852275-17852514)
chr6 (113-360)||(22858296-22858534)
chr6 (196-360)||(20526548-20526708)
chr6 (196-282)||(30445318-30445404)
chr6 (15-89)||(28241577-28241645)
chr6 (15-89)||(14459021-14459089)
chr6 (15-89)||(20915612-20915682)
chr6 (15-58)||(4816487-4816530)
chr6 (15-89)||(14507431-14507499)
chr6 (196-282)||(30443111-30443195)
chr6 (17-89)||(15541398-15541464)
chr6 (15-89)||(1230505-1230573)
chr6 (15-89)||(8995469-8995537)
chr6 (15-89)||(9019916-9019984)
chr6 (15-89)||(11983285-11983353)
chr6 (15-89)||(15532937-15533005)
chr6 (15-89)||(19227664-19227732)
chr6 (15-54)||(24338704-24338743)
chr6 (15-54)||(25477293-25477332)
chr6 (15-58)||(26065001-26065044)
chr6 (15-58)||(26084970-26085013)
chr6 (17-89)||(26932820-26932894)
chr6 (15-89)||(30034859-30034931)
chr6 (15-89)||(30967188-30967259)
chr6 (15-54)||(32447572-32447611)
chr6 (17-54)||(13057213-13057250)
chr6 (15-89)||(1072133-1072201)
chr6 (15-54)||(3390398-3390437)
chr6 (22-54)||(15719673-15719705)
chr6 (15-54)||(3630120-3630159)
chr6 (15-54)||(3632194-3632233)
chr6 (305-348)||(12158532-12158575)
chr6 (23-54)||(17852561-17852592)
chr6 (15-53)||(3233987-3234025)
chr6 (17-54)||(13039773-13039810)
chr6 (116-152)||(20526744-20526780)
chr6 (15-54)||(22490658-22490698)
chr6 (307-352)||(30443022-30443069)
[»] chr5 (65 HSPs)
chr5 (15-386)||(27912195-27912559)
chr5 (15-386)||(18468674-18469034)
chr5 (113-360)||(25803709-25803953)
chr5 (23-362)||(18511476-18511802)
chr5 (15-366)||(27910131-27910473)
chr5 (113-386)||(18509661-18509931)
chr5 (113-360)||(3373383-3373628)
chr5 (113-386)||(26098593-26098865)
chr5 (113-360)||(15551927-15552172)
chr5 (113-342)||(10586549-10586776)
chr5 (113-360)||(26097423-26097670)
chr5 (15-282)||(18466453-18466707)
chr5 (113-360)||(18596328-18596584)
chr5 (179-360)||(21288531-21288713)
chr5 (210-355)||(17415748-17415893)
chr5 (113-282)||(15143262-15143425)
chr5 (15-89)||(4410012-4410084)
chr5 (258-360)||(6661929-6662031)
chr5 (161-229)||(40221340-40221408)
chr5 (15-89)||(25921729-25921797)
chr5 (15-89)||(31542690-31542758)
chr5 (15-89)||(6747259-6747329)
chr5 (303-360)||(40221284-40221341)
chr5 (15-89)||(1189865-1189938)
chr5 (308-360)||(18466413-18466465)
chr5 (15-89)||(2818592-2818660)
chr5 (15-89)||(10529355-10529423)
chr5 (15-89)||(16776113-16776181)
chr5 (15-89)||(20507718-20507786)
chr5 (15-89)||(31545035-31545103)
chr5 (15-58)||(34477310-34477353)
chr5 (15-58)||(34479675-34479718)
chr5 (15-89)||(39854439-39854506)
chr5 (15-89)||(38882060-38882129)
chr5 (308-357)||(15143225-15143274)
chr5 (15-89)||(21684707-21684785)
chr5 (15-54)||(2174903-2174942)
chr5 (15-89)||(4236584-4236652)
chr5 (15-89)||(10586794-10586865)
chr5 (15-89)||(31179627-31179695)
chr5 (15-89)||(15552190-15552268)
chr5 (15-56)||(16092456-16092497)
chr5 (15-54)||(17072867-17072906)
chr5 (15-54)||(20043034-20043073)
chr5 (15-54)||(25904087-25904126)
chr5 (15-54)||(31472869-31472908)
chr5 (15-54)||(40221506-40221545)
chr5 (15-89)||(6745016-6745092)
chr5 (23-89)||(18509582-18509643)
chr5 (15-89)||(25803971-25804048)
chr5 (15-51)||(10474579-10474615)
chr5 (15-54)||(695873-695912)
chr5 (15-54)||(6756478-6756517)
chr5 (15-54)||(26098507-26098546)
chr5 (15-54)||(34530922-34530961)
chr5 (23-54)||(36402592-36402623)
chr5 (15-54)||(39398249-39398287)
chr5 (196-238)||(6661594-6661636)
chr5 (16-54)||(37706037-37706075)
chr5 (113-151)||(40221423-40221461)
chr5 (22-88)||(4897674-4897742)
chr5 (303-352)||(5779168-5779217)
chr5 (53-89)||(15354770-15354806)
chr5 (53-89)||(15357046-15357082)
chr5 (209-282)||(32520241-32520316)
[»] scaffold0511 (1 HSPs)
scaffold0511 (15-360)||(1737-2074)
[»] chr7 (82 HSPs)
chr7 (15-360)||(7094678-7095013)
chr7 (23-386)||(7092439-7092792)
chr7 (113-386)||(20299131-20299401)
chr7 (15-384)||(7470278-7470643)
chr7 (15-386)||(28487225-28487586)
chr7 (15-386)||(7349529-7349891)
chr7 (15-360)||(3035417-3035754)
chr7 (113-360)||(1849667-1849912)
chr7 (15-357)||(20625739-20626071)
chr7 (15-357)||(20629630-20629962)
chr7 (15-357)||(20642049-20642381)
chr7 (113-386)||(31156253-31156524)
chr7 (113-386)||(38395962-38396233)
chr7 (113-360)||(1606173-1606417)
chr7 (15-360)||(7351908-7352244)
chr7 (15-360)||(7472236-7472572)
chr7 (113-360)||(11756927-11757171)
chr7 (15-360)||(28485263-28485599)
chr7 (162-360)||(47865330-47865528)
chr7 (113-360)||(18345239-18345484)
chr7 (113-360)||(37412470-37412714)
chr7 (15-360)||(38393685-38394019)
chr7 (113-360)||(21470637-21470881)
chr7 (161-354)||(24258166-24258358)
chr7 (113-360)||(21989855-21990098)
chr7 (113-360)||(42331341-42331591)
chr7 (113-290)||(13099818-13099993)
chr7 (161-282)||(43253914-43254035)
chr7 (113-360)||(3676999-3677227)
chr7 (214-360)||(443328-443474)
chr7 (116-258)||(20297163-20297302)
chr7 (196-359)||(40281824-40281989)
chr7 (15-89)||(3878540-3878610)
chr7 (15-89)||(44529-44597)
chr7 (15-89)||(48457614-48457686)
chr7 (15-89)||(1049551-1049619)
chr7 (15-89)||(27306485-27306553)
chr7 (196-282)||(12310442-12310528)
chr7 (15-89)||(35594-35662)
chr7 (15-58)||(1849971-1850014)
chr7 (15-89)||(20297323-20297395)
chr7 (15-89)||(40946289-40946361)
chr7 (303-352)||(20297108-20297157)
chr7 (15-89)||(9680779-9680852)
chr7 (15-54)||(11355252-11355291)
chr7 (15-89)||(18345502-18345574)
chr7 (15-89)||(18567578-18567646)
chr7 (15-54)||(20137365-20137404)
chr7 (15-54)||(21678060-21678099)
chr7 (15-54)||(21680021-21680060)
chr7 (15-54)||(24258457-24258496)
chr7 (15-54)||(26804563-26804602)
chr7 (15-89)||(31156167-31156235)
chr7 (15-89)||(31435303-31435371)
chr7 (15-89)||(40836998-40837066)
chr7 (304-352)||(10690684-10690732)
chr7 (30-89)||(11757189-11757246)
chr7 (30-89)||(20299419-20299476)
chr7 (26-89)||(22392438-22392495)
chr7 (15-58)||(1047180-1047223)
chr7 (235-282)||(12484976-12485023)
chr7 (235-282)||(12506407-12506454)
chr7 (15-54)||(22828889-22828928)
chr7 (15-89)||(25542496-25542563)
chr7 (15-58)||(38396306-38396349)
chr7 (15-54)||(44724573-44724612)
chr7 (308-354)||(43254023-43254069)
chr7 (187-268)||(10690773-10690854)
chr7 (31-89)||(9679019-9679076)
chr7 (22-54)||(24465543-24465575)
chr7 (46-89)||(1606435-1606478)
chr7 (23-54)||(4296199-4296230)
chr7 (23-54)||(7188537-7188568)
chr7 (235-282)||(12657600-12657647)
chr7 (15-54)||(13099732-13099771)
chr7 (15-54)||(21592399-21592438)
chr7 (15-54)||(22251798-22251837)
chr7 (15-50)||(24748592-24748627)
chr7 (15-54)||(37412384-37412423)
chr7 (23-89)||(42331263-42331323)
chr7 (113-151)||(443504-443542)
chr7 (23-89)||(43253780-43253848)
[»] chr8 (51 HSPs)
chr8 (15-360)||(608472-608813)
chr8 (15-360)||(43529873-43530207)
chr8 (15-360)||(28283475-28283811)
chr8 (15-357)||(15808967-15809298)
chr8 (113-386)||(41384469-41384738)
chr8 (161-360)||(3873752-3873952)
chr8 (113-360)||(41382421-41382666)
chr8 (204-360)||(32339096-32339252)
chr8 (245-360)||(3265635-3265750)
chr8 (15-89)||(24873437-24873511)
chr8 (113-211)||(181434-181530)
chr8 (15-88)||(12517280-12517349)
chr8 (15-89)||(14807762-14807830)
chr8 (15-89)||(32339316-32339388)
chr8 (15-89)||(22684912-22684990)
chr8 (15-89)||(3886174-3886242)
chr8 (196-282)||(11701364-11701447)
chr8 (15-89)||(4424029-4424097)
chr8 (15-89)||(15072721-15072789)
chr8 (15-89)||(18810719-18810787)
chr8 (15-89)||(27826997-27827065)
chr8 (15-89)||(27829308-27829376)
chr8 (15-89)||(44720854-44720922)
chr8 (8-54)||(35872627-35872673)
chr8 (15-89)||(3874017-3874089)
chr8 (15-54)||(5622994-5623033)
chr8 (208-279)||(13986214-13986285)
chr8 (15-54)||(14419447-14419486)
chr8 (15-89)||(18812904-18812972)
chr8 (15-54)||(25952561-25952600)
chr8 (15-54)||(26775241-26775280)
chr8 (15-54)||(27107153-27107192)
chr8 (15-54)||(33541644-33541683)
chr8 (15-54)||(37214466-37214505)
chr8 (15-58)||(43082009-43082052)
chr8 (15-53)||(36865579-36865617)
chr8 (15-54)||(1225206-1225245)
chr8 (15-54)||(13858740-13858779)
chr8 (15-54)||(14477316-14477355)
chr8 (15-54)||(15068021-15068060)
chr8 (306-352)||(13986328-13986374)
chr8 (308-352)||(11701435-11701479)
chr8 (15-89)||(181548-181616)
chr8 (15-54)||(5372434-5372472)
chr8 (23-54)||(27911055-27911086)
chr8 (23-54)||(27957474-27957505)
chr8 (15-54)||(30480759-30480798)
chr8 (15-58)||(43079639-43079681)
chr8 (113-151)||(32339260-32339298)
chr8 (303-352)||(30679208-30679256)
chr8 (22-54)||(21480554-21480586)
[»] chr1 (81 HSPs)
chr1 (113-386)||(31735869-31736139)
chr1 (15-360)||(47905958-47906293)
chr1 (15-360)||(15295092-15295437)
chr1 (15-360)||(9463502-9463838)
chr1 (15-360)||(24325349-24325686)
chr1 (15-360)||(39931764-39932096)
chr1 (15-360)||(9459675-9460011)
chr1 (162-386)||(27337332-27337556)
chr1 (113-360)||(17324980-17325225)
chr1 (15-330)||(21948445-21948751)
chr1 (15-360)||(27339388-27339728)
chr1 (164-360)||(48664854-48665050)
chr1 (164-357)||(2949617-2949810)
chr1 (177-360)||(6115532-6115716)
chr1 (161-360)||(28998643-28998842)
chr1 (161-360)||(29004359-29004558)
chr1 (172-360)||(45693834-45694022)
chr1 (170-360)||(4131690-4131880)
chr1 (174-386)||(6997190-6997395)
chr1 (164-324)||(6996067-6996221)
chr1 (113-250)||(46432072-46432207)
chr1 (247-360)||(46432521-46432634)
chr1 (209-360)||(16561133-16561284)
chr1 (196-282)||(11693580-11693666)
chr1 (16-240)||(2510583-2510801)
chr1 (196-282)||(13785662-13785748)
chr1 (115-228)||(26520463-26520580)
chr1 (196-279)||(14352759-14352842)
chr1 (15-89)||(47177313-47177385)
chr1 (15-89)||(47179664-47179736)
chr1 (161-223)||(6115479-6115541)
chr1 (15-89)||(28842448-28842518)
chr1 (15-89)||(20302414-20302482)
chr1 (15-88)||(6822971-6823038)
chr1 (15-89)||(27337196-27337268)
chr1 (15-89)||(51749994-51750062)
chr1 (15-88)||(6823840-6823908)
chr1 (15-89)||(28840633-28840703)
chr1 (196-279)||(10115572-10115653)
chr1 (15-89)||(12302763-12302836)
chr1 (15-89)||(2617471-2617539)
chr1 (15-89)||(13215036-13215104)
chr1 (15-89)||(13761792-13761860)
chr1 (15-89)||(25127820-25127895)
chr1 (15-89)||(41646875-41646943)
chr1 (232-282)||(32260833-32260883)
chr1 (303-352)||(32260746-32260795)
chr1 (23-89)||(10400094-10400154)
chr1 (15-89)||(15823501-15823569)
chr1 (15-89)||(16231556-16231624)
chr1 (15-54)||(17318877-17318916)
chr1 (15-54)||(18307093-18307132)
chr1 (15-54)||(25248772-25248811)
chr1 (15-89)||(28207324-28207392)
chr1 (15-54)||(31423132-31423171)
chr1 (15-89)||(31735779-31735851)
chr1 (15-89)||(38925736-38925804)
chr1 (15-89)||(51752320-51752388)
chr1 (243-289)||(13112047-13112093)
chr1 (15-53)||(16428638-16428676)
chr1 (15-54)||(17186386-17186425)
chr1 (15-54)||(18839571-18839610)
chr1 (15-89)||(20291412-20291480)
chr1 (15-54)||(31425277-31425316)
chr1 (15-89)||(48665126-48665200)
chr1 (15-56)||(4131637-4131678)
chr1 (21-54)||(50079085-50079118)
chr1 (22-54)||(6115344-6115376)
chr1 (15-58)||(46431965-46432009)
chr1 (23-54)||(2949497-2949528)
chr1 (15-54)||(6995958-6995997)
chr1 (15-54)||(11457733-11457772)
chr1 (305-352)||(11693706-11693753)
chr1 (15-54)||(25251533-25251572)
chr1 (15-54)||(31489899-31489938)
chr1 (23-89)||(26613503-26613566)
chr1 (303-352)||(13785786-13785835)
chr1 (15-51)||(6756514-6756550)
chr1 (312-352)||(10115466-10115506)
chr1 (15-47)||(16432396-16432428)
chr1 (26-54)||(49495468-49495496)
[»] chr3 (82 HSPs)
chr3 (15-360)||(746424-746760)
chr3 (15-386)||(457926-458287)
chr3 (15-360)||(4104149-4104481)
chr3 (15-360)||(25533109-25533445)
chr3 (113-386)||(53915836-53916106)
chr3 (15-360)||(455575-455910)
chr3 (113-386)||(42991929-42992199)
chr3 (112-360)||(51943044-51943289)
chr3 (113-360)||(10621882-10622125)
chr3 (113-360)||(1313084-1313327)
chr3 (113-360)||(27635968-27636210)
chr3 (165-360)||(41848806-41849001)
chr3 (113-360)||(42989954-42990199)
chr3 (113-357)||(53918004-53918245)
chr3 (15-89)||(6063700-6063770)
chr3 (17-89)||(10084645-10084715)
chr3 (15-89)||(4308535-4308603)
chr3 (196-279)||(11066346-11066429)
chr3 (15-89)||(11163085-11163153)
chr3 (15-89)||(11170339-11170407)
chr3 (15-89)||(27101435-27101507)
chr3 (15-89)||(9604861-9604934)
chr3 (303-360)||(6561615-6561672)
chr3 (17-89)||(10191565-10191635)
chr3 (15-89)||(38889974-38890043)
chr3 (207-279)||(54287487-54287559)
chr3 (15-89)||(3859463-3859531)
chr3 (15-89)||(5522869-5522937)
chr3 (15-89)||(51727260-51727328)
chr3 (15-89)||(18099424-18099493)
chr3 (15-65)||(42990257-42990307)
chr3 (212-277)||(53974011-53974077)
chr3 (18-89)||(1321376-1321441)
chr3 (15-152)||(6561689-6561813)
chr3 (15-89)||(26720483-26720551)
chr3 (15-58)||(30005801-30005844)
chr3 (15-89)||(35918203-35918271)
chr3 (15-89)||(43226021-43226089)
chr3 (15-89)||(50493934-50494002)
chr3 (15-89)||(6066050-6066119)
chr3 (212-282)||(11072731-11072801)
chr3 (17-89)||(22114561-22114627)
chr3 (15-54)||(1626937-1626976)
chr3 (15-54)||(5191617-5191656)
chr3 (21-89)||(6719357-6719433)
chr3 (15-89)||(15780795-15780863)
chr3 (15-89)||(24979642-24979710)
chr3 (15-54)||(28102256-28102295)
chr3 (15-54)||(28137549-28137588)
chr3 (15-89)||(35777356-35777424)
chr3 (15-58)||(38210330-38210373)
chr3 (15-89)||(43228226-43228294)
chr3 (15-54)||(45882903-45882942)
chr3 (15-54)||(47149149-47149188)
chr3 (15-89)||(18097154-18097223)
chr3 (15-57)||(42992247-42992289)
chr3 (303-352)||(53974148-53974197)
chr3 (22-58)||(29956646-29956682)
chr3 (15-89)||(10958577-10958645)
chr3 (15-54)||(28100295-28100334)
chr3 (15-54)||(32219059-32219098)
chr3 (15-54)||(32264293-32264332)
chr3 (15-54)||(43423717-43423756)
chr3 (15-54)||(47701849-47701888)
chr3 (15-54)||(51675009-51675048)
chr3 (15-53)||(10956281-10956319)
chr3 (306-352)||(11072644-11072690)
chr3 (15-89)||(10621784-10621864)
chr3 (23-89)||(41849077-41849147)
chr3 (15-54)||(3314648-3314687)
chr3 (235-282)||(5535882-5535929)
chr3 (15-54)||(5927018-5927057)
chr3 (15-54)||(6231413-6231452)
chr3 (23-54)||(27635889-27635920)
chr3 (15-54)||(28761682-28761721)
chr3 (15-54)||(43421669-43421708)
chr3 (15-54)||(51943335-51943374)
chr3 (113-151)||(41849021-41849059)
chr3 (15-53)||(53468709-53468747)
chr3 (22-55)||(3306762-3306795)
chr3 (45-89)||(27101540-27101582)
chr3 (25-53)||(53915760-53915788)
[»] chr4 (87 HSPs)
chr4 (113-384)||(22132741-22133009)
chr4 (15-386)||(14787687-14788045)
chr4 (15-360)||(17662490-17662824)
chr4 (113-386)||(5100719-5100988)
chr4 (113-360)||(22134972-22135217)
chr4 (15-360)||(24347961-24348295)
chr4 (161-360)||(56030191-56030390)
chr4 (161-360)||(44600227-44600426)
chr4 (115-346)||(30136331-30136560)
chr4 (212-360)||(47211158-47211306)
chr4 (121-360)||(38890478-38890699)
chr4 (196-360)||(10112628-10112787)
chr4 (113-255)||(19322547-19322689)
chr4 (196-360)||(9022062-9022225)
chr4 (208-360)||(9863501-9863650)
chr4 (196-282)||(54929094-54929180)
chr4 (15-231)||(53405001-53405207)
chr4 (15-89)||(38409208-38409282)
chr4 (15-89)||(5637721-5637793)
chr4 (15-89)||(8631675-8631747)
chr4 (203-282)||(10979676-10979755)
chr4 (15-89)||(47210996-47211070)
chr4 (15-89)||(5198429-5198497)
chr4 (15-89)||(24888805-24888873)
chr4 (15-89)||(7941328-7941398)
chr4 (15-89)||(9148260-9148330)
chr4 (303-360)||(14789512-14789569)
chr4 (15-89)||(6764848-6764916)
chr4 (15-89)||(11006493-11006565)
chr4 (15-89)||(11434964-11435032)
chr4 (15-89)||(40637083-40637151)
chr4 (15-89)||(11008822-11008894)
chr4 (15-89)||(18709419-18709495)
chr4 (15-89)||(36919841-36919911)
chr4 (15-89)||(37089627-37089698)
chr4 (261-360)||(19322410-19322510)
chr4 (15-89)||(22044646-22044714)
chr4 (15-89)||(22802990-22803058)
chr4 (15-89)||(47274736-47274804)
chr4 (15-89)||(48486328-48486396)
chr4 (15-89)||(51015255-51015323)
chr4 (8-54)||(24446828-24446874)
chr4 (196-352)||(38209098-38209259)
chr4 (15-89)||(36921750-36921819)
chr4 (15-89)||(619703-619771)
chr4 (15-89)||(9174402-9174470)
chr4 (15-89)||(9176730-9176798)
chr4 (15-89)||(16934399-16934467)
chr4 (15-89)||(18847162-18847230)
chr4 (15-54)||(22046941-22046980)
chr4 (15-89)||(22132646-22132723)
chr4 (23-89)||(22801126-22801186)
chr4 (220-279)||(29609838-29609897)
chr4 (15-54)||(31849855-31849894)
chr4 (15-54)||(37313322-37313361)
chr4 (15-89)||(40091671-40091739)
chr4 (15-89)||(44600094-44600162)
chr4 (15-89)||(47868410-47868478)
chr4 (15-89)||(2485128-2485197)
chr4 (15-53)||(2891356-2891394)
chr4 (15-56)||(16453345-16453386)
chr4 (15-54)||(3937465-3937504)
chr4 (231-282)||(5516701-5516752)
chr4 (15-89)||(16932045-16932113)
chr4 (15-58)||(22780629-22780672)
chr4 (15-58)||(22782994-22783037)
chr4 (15-54)||(33415743-33415782)
chr4 (15-54)||(36378330-36378369)
chr4 (15-54)||(38928434-38928473)
chr4 (113-187)||(47211088-47211160)
chr4 (31-89)||(13543963-13544020)
chr4 (15-54)||(12396101-12396140)
chr4 (15-54)||(12401063-12401102)
chr4 (243-282)||(14647175-14647214)
chr4 (23-54)||(19095920-19095951)
chr4 (15-54)||(24879027-24879066)
chr4 (313-348)||(29609948-29609983)
chr4 (15-54)||(38270242-38270281)
chr4 (15-54)||(52942702-52942740)
chr4 (113-151)||(18709513-18709551)
chr4 (15-45)||(22134871-22134901)
chr4 (303-352)||(54929220-54929267)
chr4 (15-89)||(3824826-3824897)
chr4 (23-56)||(16455323-16455356)
chr4 (306-346)||(5516793-5516833)
chr4 (15-43)||(18409603-18409631)
chr4 (22-89)||(25357646-25357713)
[»] scaffold0005 (3 HSPs)
scaffold0005 (15-386)||(51685-52043)
scaffold0005 (303-360)||(50161-50218)
scaffold0005 (243-282)||(170076-170115)
[»] chr2 (48 HSPs)
chr2 (161-386)||(35215983-35216208)
chr2 (15-360)||(42452451-42452782)
chr2 (15-360)||(23452493-23452827)
chr2 (161-360)||(35218364-35218563)
chr2 (161-360)||(42923893-42924092)
chr2 (113-360)||(27583667-27583905)
chr2 (196-352)||(28568584-28568740)
chr2 (196-282)||(15693669-15693755)
chr2 (232-360)||(27136367-27136503)
chr2 (15-89)||(5377685-5377757)
chr2 (267-355)||(34575608-34575696)
chr2 (196-281)||(7502638-7502723)
chr2 (15-89)||(24162468-24162536)
chr2 (211-282)||(39286971-39287042)
chr2 (15-89)||(13910300-13910368)
chr2 (15-89)||(19504601-19504669)
chr2 (15-89)||(40032314-40032382)
chr2 (203-282)||(41304806-41304884)
chr2 (161-257)||(34575528-34575617)
chr2 (204-282)||(41303457-41303535)
chr2 (15-89)||(27104730-27104798)
chr2 (15-89)||(42064446-42064514)
chr2 (15-89)||(21520949-21521019)
chr2 (303-352)||(28568346-28568395)
chr2 (15-89)||(35215842-35215920)
chr2 (15-55)||(38020161-38020201)
chr2 (22-89)||(45280248-45280309)
chr2 (15-89)||(6264401-6264469)
chr2 (15-54)||(19007600-19007639)
chr2 (15-89)||(19502267-19502335)
chr2 (15-54)||(31733021-31733060)
chr2 (15-58)||(35218219-35218262)
chr2 (15-54)||(22163203-22163242)
chr2 (15-54)||(22287592-22287631)
chr2 (15-89)||(22407665-22407733)
chr2 (15-54)||(28196597-28196636)
chr2 (306-352)||(15693583-15693629)
chr2 (21-54)||(17849077-17849110)
chr2 (15-56)||(42923765-42923806)
chr2 (22-54)||(22874102-22874134)
chr2 (22-54)||(37963190-37963222)
chr2 (15-86)||(43623824-43623889)
chr2 (15-54)||(11739816-11739855)
chr2 (15-54)||(34979835-34979874)
chr2 (15-54)||(38020103-38020142)
chr2 (303-352)||(41303573-41303623)
chr2 (21-58)||(45239238-45239275)
chr2 (22-54)||(18800565-18800597)
[»] scaffold0154 (1 HSPs)
scaffold0154 (113-360)||(11815-12059)
[»] scaffold0031 (2 HSPs)
scaffold0031 (113-360)||(78885-79131)
scaffold0031 (15-54)||(79178-79217)
[»] scaffold0133 (2 HSPs)
scaffold0133 (214-367)||(4541-4694)
scaffold0133 (113-152)||(4722-4761)
[»] scaffold0468 (3 HSPs)
scaffold0468 (247-360)||(2070-2183)
scaffold0468 (161-219)||(2022-2080)
scaffold0468 (23-55)||(1895-1927)
[»] scaffold1674 (1 HSPs)
scaffold1674 (268-386)||(1-119)
[»] scaffold0025 (2 HSPs)
scaffold0025 (15-89)||(69547-69619)
scaffold0025 (15-89)||(73279-73351)
[»] scaffold0038 (1 HSPs)
scaffold0038 (15-89)||(41739-41807)
[»] scaffold0552 (1 HSPs)
scaffold0552 (15-89)||(1087-1155)
[»] scaffold0250 (1 HSPs)
scaffold0250 (15-89)||(2844-2912)
[»] scaffold0267 (1 HSPs)
scaffold0267 (15-86)||(1-73)
[»] scaffold0472 (1 HSPs)
scaffold0472 (15-89)||(6163-6231)
[»] scaffold0339 (1 HSPs)
scaffold0339 (15-89)||(3961-4029)
[»] scaffold0131 (2 HSPs)
scaffold0131 (15-89)||(14983-15051)
scaffold0131 (15-88)||(14638-14707)
[»] scaffold0008 (1 HSPs)
scaffold0008 (209-279)||(57836-57905)
[»] scaffold0068 (1 HSPs)
scaffold0068 (15-89)||(29125-29203)
[»] scaffold0004 (1 HSPs)
scaffold0004 (15-54)||(79852-79891)
[»] scaffold0533 (1 HSPs)
scaffold0533 (211-258)||(1971-2018)
[»] scaffold0474 (1 HSPs)
scaffold0474 (303-352)||(10443-10492)


Alignment Details
Target: chr6 (Bit Score: 229; Significance: 1e-126; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 15 - 360
Target Start/End: Original strand, 19704825 - 19705163
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatattcaccgccaatgagatggacatcatc 114  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| |  |    ||| ||  | | | ||    
T  19704825 tgttgcctttctaaacccttgtttcagccccctccatctctctctcaaagtttgctctgatacaaggtctatatttatag----tgaaat--ataac-tc 19704917  T
Q  115 ataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaata 214  Q
    ||||||||||||||||||||||||| ||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19704918 ataaatttggaacgaatatcacacttaagatacgtttcttttttttctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaata 19705017  T
Q  215 tatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatattt 314  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||    
T  19705018 tatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgaaacaaatcttttatattt 19705117  T
Q  315 ttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  19705118 ttagcaacaatattcttcttccatcaaattttgagtcatactacaa 19705163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 113 - 360
Target Start/End: Complemental strand, 18317998 - 18317753
Alignment:
Q  113 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 212  Q
    |||||||||||||||||||| ||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18317998 tcataaatttggaacgaataccacactgaagatacgttt--tttttttctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 18317901  T
Q  213 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 312  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||    
T  18317900 tatatttgcatcaaatcttccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatat 18317801  T
Q  313 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  18317800 ttttagcaacaatattcttcttccttcaaattttgagtcatactacaa 18317753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 15 - 360
Target Start/End: Original strand, 2629141 - 2629477
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatattcaccgccaatgagatggacatcatc 114  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||||||    |||||||||||||||||| |  |  || |      | | | |     
T  2629141 tgttgcctttctaaacccttgtttcagcccc-tctatctctctctcaaagtttaacatgatacaaggtctatatttatagtaaaagt-----ataac-ta 2629233  T
Q  115 ataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaata 214  Q
    ||||||||||||| ||||  |||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  2629234 ataaatttggaacaaatactacactgaagatacgttt--ttttttcctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaata 2629331  T
Q  215 tatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatattt 314  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||    
T  2629332 tatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattt 2629431  T
Q  315 ttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  2629432 ttagcaacaatattcttcttccatcaaattttgagtcatactacaa 2629477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 161 - 360
Target Start/End: Original strand, 5275727 - 5275926
Alignment:
Q  161 ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttatt 260  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  5275727 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttatt 5275826  T
Q  261 gtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    |||||||||||||||||||||||||||||| ||||       |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  5275827 gtccataaatatattttcagcacaaaatatatttgaaataaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaa 5275926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 15 - 360
Target Start/End: Original strand, 12195771 - 12196102
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatattcaccgccaatgagatggacatcatc 114  Q
    |||||| |||||||||||||||||||||||||||||||||      |||||||||| |||||||||||||||||| |  |  || |      | | | ||    
T  12195771 tgttgcttttctaaacccttgtttcagccccctctatctc------aaagtttgctttgatacaaggtctatatttatagtaaaagt-----ataac-tc 12195858  T
Q  115 ataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaata 214  Q
    ||||||||||||| |||| |||||||||||| |||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  12195859 ataaatttggaacaaataccacactgaagattcgttt--tttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaata 12195956  T
Q  215 tatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatattt 314  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||       ||||||||||||    
T  12195957 tatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaatatatatttgaaacaaatcttttatattt 12196056  T
Q  315 ttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    |||||||||||||||| | |||||||| ||||||||||||||||||    
T  12196057 ttagcaacaatattctccatccatcaatttttgagtcatactacaa 12196102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 113 - 360
Target Start/End: Original strand, 30034949 - 30035194
Alignment:
Q  113 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 212  Q
    ||||||||||||||| ||||||||| |||||||||||||         |||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  30034949 tcataaatttggaacaaatatcacattgaagatacgttt--ttattttctccttcagtgaaagaatatctgcatcaaaaatataatattccctttcaaaa 30035046  T
Q  213 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 312  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||       ||||||||||    
T  30035047 tatatttgcattaaatcgttcttcatacgatacaaaaatatatttattgtctataaatatatttttagcacaaaatatatttgaaacaaatcttttatat 30035146  T
Q  313 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||    
T  30035147 ttttagcaacaatattctccatccatcaaattttgagtcatactacaa 30035194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 113 - 360
Target Start/End: Complemental strand, 30967170 - 30966925
Alignment:
Q  113 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 212  Q
    ||||||||||||||| |||| |||||||||||| |||||         |||||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  30967170 tcataaatttggaacaaataccacactgaagattcgttt--tttttttctccttcagtgaaagaatatttgcatcaaaaatataatattcgctttcaaaa 30967073  T
Q  213 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 312  Q
    ||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||    
T  30967072 tatatttgcattaaatcgttcttcatacaatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaataaatcttttatat 30966973  T
Q  313 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    |||||||||||||||||| | |||||||||||| ||||||||||||||    
T  30966972 ttttagcaacaatattctccatccatcaaatttggagtcatactacaa 30966925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 114 - 360
Target Start/End: Original strand, 26932913 - 26933156
Alignment:
Q  114 cataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaat 213  Q
    |||||||||||||| |||| |||||||||||| |||||         |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  26932913 cataaatttggaacaaataccacactgaagattcgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaat 26933009  T
Q  214 atatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatt 313  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||| ||||       |||||||||||    
T  26933010 atatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataataatattttcagcacaatatatatttgaaacaaatcttttatatt 26933109  T
Q  314 tttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    ||||||||||||||||| | |||||||| ||||||||||||||||||    
T  26933110 tttagcaacaatattctccatccatcaatttttgagtcatactacaa 26933156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 113 - 360
Target Start/End: Complemental strand, 17012017 - 17011781
Alignment:
Q  113 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 212  Q
    |||||||||||||||||| ||||| ||||||||||||||          |  |||||||||||||||||||||| |||||||||||||||||||||||||    
T  17012017 tcataaatttggaacgaacatcactctgaagatacgttt--------tttttttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 17011926  T
Q  213 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 312  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||  |||||||||   ||         |||||||||    
T  17011925 tatatttgcatcaaatcgtccatcatacggtacaaaaatatatttattgtccataaatatattttctacacaaaata---tttaaaacaaacttttatat 17011829  T
Q  313 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    ||||||||| |||||||||| ||||||||||||| |||||||||||||    
T  17011828 ttttagcaataatattcttcatccatcaaattttaagtcatactacaa 17011781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 113 - 354
Target Start/End: Complemental strand, 17852514 - 17852275
Alignment:
Q  113 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 212  Q
    |||||||||||||||||||| ||||| |||||||| |||         ||| |||||||||| ||||||||||| |||||||||||||||||||||||||    
T  17852514 tcataaatttggaacgaataccacac-gaagatacttttttttttcttctctttcagtgaaataatatttgcatcaaaaatataatattccctttcaaaa 17852416  T
Q  213 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 312  Q
    |||||||||||||||| || ||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||  ||||       ||||||||||    
T  17852415 tatatttgcatcaaatagttcttcataaggtacaaaaatatatttattgtccataaatatattttcagcataaaata--tttgaaacaaatcttttatat 17852318  T
Q  313 ttttagca--acaatattcttcttccatcaaattttgagtcata 354  Q
    ||||||||  |||||||||| | | |||||||||||||||||||    
T  17852317 ttttagcaacacaatattctccat-catcaaattttgagtcata 17852275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 113 - 360
Target Start/End: Original strand, 22858296 - 22858534
Alignment:
Q  113 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 212  Q
    |||||||||||||||| |||||||  ||||||||||||||        |||||||| ||||||||||||||||| ||||        |||||||||||||    
T  22858296 tcataaatttggaacgtatatcacgttgaagatacgtttcttttttt-ctccttcaatgaaagaatatttgcatcaaaa--------ttccctttcaaaa 22858386  T
Q  213 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 312  Q
    |||||||||||| |||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||        ||||||||||    
T  22858387 tatatttgcatctaatcttctttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaagtatatttaaaacaaatcttttatat 22858486  T
Q  313 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    |||||  ||||||||||||| |||||||||||||||||||||||||||    
T  22858487 ttttattaacaatattcttcatccatcaaattttgagtcatactacaa 22858534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 196 - 360
Target Start/End: Complemental strand, 20526708 - 20526548
Alignment:
Q  196 aatattccctttcaaaa-tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatcttt 294  Q
    ||||||| ||||||||| ||||||||||||||||| ||||||||||| ||||||||||||| ||     ||||||||||||||||||| ||||||| |||    
T  20526708 aatattctctttcaaaaatatatttgcatcaaatcttccttcatacggtacaaaaatatatgta-----cataaatatattttcagcataaaatatattt 20526614  T
Q  295 gnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    |       ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  20526613 gaaacaaatcttttatatttttagcaacaatattcttcacccatcaaattttgagtcatactacaa 20526548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 196 - 282
Target Start/End: Complemental strand, 30445404 - 30445318
Alignment:
Q  196 aatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 282  Q
    |||||||| ||| ||||||||||||||||||||| ||||||||| | |||||||||||||||||||| |||||||||||||||||||    
T  30445404 aatattcctttttaaaatatatttgcatcaaatcttccttcatatggtacaaaaatatatttattgttcataaatatattttcagca 30445318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 28241577 - 28241645
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||    
T  28241577 tgttgcctttctaaacccttgtttcagccccctctatctct------aagtttgctctgatacaaggtctatatt 28241645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 14459021 - 14459089
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||| ||||||||||||||||||      ||||||||||||||||||||||||||||||    
T  14459021 tgttgcctttctaaacccttatttcagccccctctatct------caaagtttgctctgatacaaggtctatatt 14459089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 20915612 - 20915682
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    ||||||||||||||||||||||||||||||||||||||||||||   || || || |||||||||||||||||||    
T  20915612 tgttgcctttctaaacccttgtttcagccccctctatctctctc---aatttagc-ctgatacaaggtctatatt 20915682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 4816487 - 4816530
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctc 58  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  4816487 tgttgcctttctaaacccttgtttcagccccctctatctctctc 4816530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 14507431 - 14507499
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||| ||||||||||||||      ||||||||||||| ||||||||||||||||    
T  14507431 tgttgcctttctaaacccttgttttagccccctctatct------caaagtttgctctaatacaaggtctatatt 14507499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 196 - 282
Target Start/End: Complemental strand, 30443195 - 30443111
Alignment:
Q  196 aatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 282  Q
    |||||| | ||| |||||| |||||||||||||| ||||| ||||| |||||| |||||||  ||||||||||||||||||||||||    
T  30443195 aatatttcttttaaaaatacatttgcatcaaatcttcctttatacggtacaaacatatatt--ttgtccataaatatattttcagca 30443111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 15541398 - 15541464
Alignment:
Q  17 ttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||||||||||||||      ||||||||  ||||||||||||||||||||    
T  15541398 ttgcctttctaaacccttgtttcagccccctctatct------caaagtttagtctgatacaaggtctatatt 15541464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 1230505 - 1230573
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||| ||| ||||||||      ||||||||||| ||||||||||||||||||    
T  1230505 tgttgcctttctaaacccttgtttcaaccctctctatct------caaagtttgctatgatacaaggtctatatt 1230573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 8995537 - 8995469
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||| |||||||||||||||||      ||||| |||||||||||| ||||||||    
T  8995537 tgttgcctttctaaacccttgttttagccccctctatctctc------agtttactctgatacaagatctatatt 8995469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 9019984 - 9019916
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||| |||||||||||||||||      ||||| |||||||||||| ||||||||    
T  9019984 tgttgcctttctaaacccttgttttagccccctctatctctc------agtttactctgatacaagatctatatt 9019916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 11983285 - 11983353
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||| || |||||||||||||||||||||      | ||||||||||||||||||||||||||||    
T  11983285 tgttgcctttctaagcctttgtttcagccccctctatct------ccaagtttgctctgatacaaggtctatatt 11983353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 15532937 - 15533005
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||| ||||||||||||||||||||||||||||||||||      ||||||||  ||||||||||||||||||||    
T  15532937 tgttacctttctaaacccttgtttcagccccctctatct------caaagtttagtctgatacaaggtctatatt 15533005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 19227664 - 19227732
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||| |||||||| |||||      ||||||||||||||||||||| ||||||||    
T  19227664 tgttgcctttctaaacccttgtttgagccccctttatct------caaagtttgctctgatacaagatctatatt 19227732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 24338704 - 24338743
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  24338704 tgttgcctttctaaacccttgtttcagccccctctatctc 24338743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 25477332 - 25477293
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  25477332 tgttgcctttctaaacccttgtttcagccccctctatctc 25477293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 26065044 - 26065001
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctc 58  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  26065044 tgttgccattctaaacccttgtttcagccccctctatctctctc 26065001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 26085013 - 26084970
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctc 58  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  26085013 tgttgccattctaaacccttgtttcagccccctctatctctctc 26084970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 26932820 - 26932894
Alignment:
Q  17 ttgcctttctaaacccttgtttcagccccctcta--tctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||| ||||||| ||||||||||| |||||||||  |||||||| ||||||||||| ||| ||||||||||||||    
T  26932820 ttgcttttctaagcccttgtttcaaccccctctatctctctctctcaaagtttgctatgaaacaaggtctatatt 26932894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 30034859 - 30034931
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||| ||| ||||||||||||||   |||||||   |||||||||||||||||||    
T  30034859 tgttgcctttctaaacccttgttttagctccctctatctctct--taaagtttagcctgatacaaggtctatatt 30034931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 30967259 - 30967188
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    ||||| |||||||||||||||||||||||||||||||||||||  ||||||||   || ||||||||||||||||    
T  30967259 tgttgtctttctaaacccttgtttcagccccctctatctctct--caaagtttagcct-atacaaggtctatatt 30967188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 32447572 - 32447611
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  32447572 tgttgcctttctaaacccttgtttcagccccctctatctc 32447611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 54
Target Start/End: Complemental strand, 13057250 - 13057213
Alignment:
Q  17 ttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||||||||    
T  13057250 ttgcctttctaaacccttgtttcagccccctctatctc 13057213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 1072133 - 1072201
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||||| || |||||||      |||||||| ||||||||||| |||||||||    
T  1072133 tgttgcctttctaaacccttgtttcagctccttctatct------caaagtttactctgatacaatgtctatatt 1072201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 3390437 - 3390398
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  3390437 tgttgcctttctaaacccttgtttcagccccgtctatctc 3390398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 54
Target Start/End: Complemental strand, 15719705 - 15719673
Alignment:
Q  22 tttctaaacccttgtttcagccccctctatctc 54  Q
    |||||||||||||||||||||||||||||||||    
T  15719705 tttctaaacccttgtttcagccccctctatctc 15719673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 3630120 - 3630159
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    |||||||||||||||||  |||||||||||||||||||||    
T  3630120 tgttgcctttctaaaccgatgtttcagccccctctatctc 3630159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 3632194 - 3632233
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    |||||||||||||||||||||||||| | |||||||||||    
T  3632194 tgttgcctttctaaacccttgtttcaactccctctatctc 3632233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 305 - 348
Target Start/End: Complemental strand, 12158575 - 12158532
Alignment:
Q  305 ttttatatttttagcaacaatattcttcttccatcaaattttga 348  Q
    ||||||||||||||||||||| |||||| | |||||||||||||    
T  12158575 ttttatatttttagcaacaatcttcttcattcatcaaattttga 12158532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 23 - 54
Target Start/End: Complemental strand, 17852592 - 17852561
Alignment:
Q  23 ttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||    
T  17852592 ttctaaacccttgtttcagccccctctatctc 17852561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 53
Target Start/End: Original strand, 3233987 - 3234025
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatct 53  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  3233987 tgttgtctttctaaatccttgtttcagccccctctatct 3234025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 54
Target Start/End: Complemental strand, 13039810 - 13039773
Alignment:
Q  17 ttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||| ||| ||||||    
T  13039810 ttgcctttctaaacccttgtttcagcctcctatatctc 13039773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 152
Target Start/End: Complemental strand, 20526780 - 20526744
Alignment:
Q  116 taaatttggaacgaatatcacactgaagatacgtttc 152  Q
    |||||||||||||||||||||| ||||||| ||||||    
T  20526780 taaatttggaacgaatatcacattgaagatgcgtttc 20526744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 22490698 - 22490658
Alignment:
Q  15 tgttgcctttctaaa-cccttgtttcagccccctctatctc 54  Q
    ||||||||||| ||| |||||||||||||||||||||||||    
T  22490698 tgttgcctttcaaaaacccttgtttcagccccctctatctc 22490658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 307 - 352
Target Start/End: Complemental strand, 30443069 - 30443022
Alignment:
Q  307 ttatatttttagcaacaatattcttcttccatc--aaattttgagtca 352  Q
    ||||||||||| |||||||||||||| ||||||  |||||||||||||    
T  30443069 ttatatttttaacaacaatattcttcatccatcataaattttgagtca 30443022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 195; Significance: 1e-106; HSPs: 65)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 15 - 386
Target Start/End: Complemental strand, 27912559 - 27912195
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatattcaccgccaatgagatggacatcatc 114  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||||||   ||||||||||||||||||| |  |  || |      | | | ||    
T  27912559 tgttgcctttctaaacccttgtttcagcaccctctatctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagt-----ataac-tc 27912466  T
Q  115 ataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaata 214  Q
    ||||||||||||| |||||||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  27912465 ataaatttggaacaaatatcacactgaagatacgttt-ttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaata 27912367  T
Q  215 tatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatattt 314  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||    
T  27912366 tatttgcatcaaatcgtttttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattt 27912267  T
Q  315 ttagcaacaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattag 386  Q
    |||||||||||||||| | ||||||||||||||||||||||||||| |||||| |||||||||| |||||||    
T  27912266 ttagcaacaatattctccatccatcaaattttgagtcatactacaacattctccaccttgactctaaattag 27912195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 15 - 386
Target Start/End: Complemental strand, 18469034 - 18468674
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatattcaccgccaatgagatggacatcatc 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||    |||||||||||||||||| |  |  || |      | | | ||    
T  18469034 tgttgcctttctaaacccttgtttcagccccctctatctctctc--aaagtttatcatgatacaaggtctatatttatagtaaaagt-----ataac-tc 18468943  T
Q  115 ataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaata 214  Q
    ||||||||||||| |||| |||||||||||||| |||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  18468942 ataaatttggaacaaataccacactgaagatactttt---tattttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaata 18468846  T
Q  215 tatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatattt 314  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||    
T  18468845 tatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattt 18468746  T
Q  315 ttagcaacaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattag 386  Q
    ||||||| |||||||| | ||||||||||||||||||||||||||| |||||| |||||||||| |||||||    
T  18468745 ttagcaaaaatattctccatccatcaaattttgagtcatactacaacattctccaccttgactctaaattag 18468674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 113 - 360
Target Start/End: Complemental strand, 25803953 - 25803709
Alignment:
Q  113 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 212  Q
    ||||||||||||||| ||||| |||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  25803953 tcataaatttggaacaaatattacactgaagatacgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 25803857  T
Q  213 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 312  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||    
T  25803856 tatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatat 25803757  T
Q  313 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||    
T  25803756 ttttagcaacaatattctccatccatcaaattttgagtcatactacaa 25803709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 23 - 362
Target Start/End: Original strand, 18511476 - 18511802
Alignment:
Q  23 ttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatattcaccgccaatgagatggacatcatcataaattt 122  Q
    ||||||||||||||||||||||||||||||||||    |||||||  |||||||||||||||||||| |      || | |   | | | ||||||||||    
T  18511476 ttctaaacccttgtttcagccccctctatctctc----aaagtttagtctgatacaaggtctatatttat-----attaaacatataac-tcataaattt 18511565  T
Q  123 ggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgca 222  Q
    |||||||||| |||||| |||||||||||         |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  18511566 ggaacgaataccacactaaagatacgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatatttcctttcaaaatatatttgca 18511662  T
Q  223 tcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaac 322  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || |       ||||||||||||||||||||    
T  18511663 tcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatattcgaaacaaatcttttatatttttagcaac 18511762  T
Q  323 aatattcttcttccatcaaattttgagtcatactacaaaa 362  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  18511763 aatattcttcatccatcaaattttgagtcatactacaaaa 18511802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 15 - 366
Target Start/End: Complemental strand, 27910473 - 27910131
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatattcaccgccaatgagatggacatcatc 114  Q
    |||||||||| |||||| |||||||||||||| ||||||||||| ||||||||   ||||||||||||||||||| |  |  || |      | | | ||    
T  27910473 tgttgcctttttaaacc-ttgtttcagcccccgctatctctctctcaaagtttaacctgatacaaggtctatatttatagtaaaagt-----ataac-tc 27910381  T
Q  115 ataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaata 214  Q
    ||||||||||||| |||| |||||||||||||| |||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  27910380 ataaatttggaacaaataccacactgaagatactttt--tttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaata 27910283  T
Q  215 tatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatattt 314  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||    
T  27910282 tatttgcatcaaatcgttcttcatacaatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattt 27910183  T
Q  315 ttagcaacaatattcttcttccatcaaattttgagtcatactacaaaattct 366  Q
    ||||||| |||||||| | ||||||||||||||||||||||||||| |||||    
T  27910182 ttagcaataatattctccatccatcaaattttgagtcatactacaacattct 27910131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 113 - 386
Target Start/End: Original strand, 18509661 - 18509931
Alignment:
Q  113 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 212  Q
    |||||||||||| | ||||| ||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  18509661 tcataaatttgggatgaataccacactgaagatacgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 18509757  T
Q  213 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 312  Q
    ||||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || |       ||||||||||    
T  18509758 tatatttgcatcaaatcattcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatattcgaaataaatcttttatat 18509857  T
Q  313 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattag 386  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||  |||||| |||||||||  |||||||    
T  18509858 ttttagcaacaatattctccatccatcaaattttgagtcatactacaccattctccaccttgactttaaattag 18509931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 113 - 360
Target Start/End: Original strand, 3373383 - 3373628
Alignment:
Q  113 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 212  Q
    ||||||||||||||| |||| ||||||||||||||||||         |||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  3373383 tcataaatttggaacaaataccacactgaagatacgttt--tttttttctccttcagtgaaaaaatatttgcatcaaaaatataatattccctttcaaaa 3373480  T
Q  213 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 312  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||       ||||||||||    
T  3373481 tatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaatatatatttgaaacaaatcttttatat 3373580  T
Q  313 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    |||||||||||||||||| | ||||||||||| |||||||||||||||    
T  3373581 ttttagcaacaatattctccatccatcaaattctgagtcatactacaa 3373628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 113 - 386
Target Start/End: Original strand, 26098593 - 26098865
Alignment:
Q  113 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 212  Q
    ||||||| |||||||||||| |||| |||||||||||||         |||||||| ||||||||| |||| || |||||||||||||||||||||||||    
T  26098593 tcataaaattggaacgaataccacattgaagatacgttt-ttttatttctccttcaatgaaagaatttttgtatcaaaaatataatattccctttcaaaa 26098691  T
Q  213 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 312  Q
    ||||||||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||    
T  26098692 tatatttgcatcaaatcgttctttatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatat 26098791  T
Q  313 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattag 386  Q
    ||||||||| |||||||| | ||||||||||||||||||||||||||| |||||| |||||||||| |||||||    
T  26098792 ttttagcaataatattctccatccatcaaattttgagtcatactacaacattctccaccttgactctaaattag 26098865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 113 - 360
Target Start/End: Complemental strand, 15552172 - 15551927
Alignment:
Q  113 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 212  Q
    ||||||||||||||| |||| ||| ||||||||||||||         |||||||||||||||||||||||||| |||||| | ||||||||||||||||    
T  15552172 tcataaatttggaacaaataccacgctgaagatacgttt--tttttttctccttcagtgaaagaatatttgcatcaaaaatgtcatattccctttcaaaa 15552075  T
Q  213 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 312  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||       ||||||||||    
T  15552074 tatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatcttcagcacaatatatatttgaaacaaatcttttatat 15551975  T
Q  313 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||    
T  15551974 ttttagcaacaatattctccatccatcaaattttgagtcatactacaa 15551927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 113 - 342
Target Start/End: Complemental strand, 10586776 - 10586549
Alignment:
Q  113 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 212  Q
    ||||||||||||||| |||| ||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  10586776 tcataaatttggaacaaataccacactgaagatacgttt--tttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 10586679  T
Q  213 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 312  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||    
T  10586678 tatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatat 10586579  T
Q  313 ttttagcaacaatattcttcttccatcaaa 342  Q
    |||||||||||||||||  | |||||||||    
T  10586578 ttttagcaacaatattccccatccatcaaa 10586549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 113 - 360
Target Start/End: Complemental strand, 26097670 - 26097423
Alignment:
Q  113 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctt--tcaa 210  Q
    |||||||||||||||||||| |||||||||||||| |||         |||||||||||||||||||||||||| |||||||||| ||| ||||  ||||    
T  26097670 tcataaatttggaacgaataccacactgaagatacattt--ttttttcctccttcagtgaaagaatatttgcatcaaaaatataacatttccttcttcaa 26097573  T
Q  211 aatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttat 310  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||       | ||||||    
T  26097572 aatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagtacaaaatatatttgaaacaaattttttat 26097473  T
Q  311 atttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    |||||||||||||||||||| | |||||||||||||||||||||||||||    
T  26097472 atttttagcaacaatattctccatccatcaaattttgagtcatactacaa 26097423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 15 - 282
Target Start/End: Complemental strand, 18466707 - 18466453
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatattcaccgccaatgagatggacatca-t 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||   ||||||||||||||||||| |  |  ||        | || | |    
T  18466707 tgttgcctttctaaacccttgtttcagccccctctatctctctc--aaagtttagcctgatacaaggtctatatttatagtaaaa-------atataact 18466617  T
Q  114 cataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaat 213  Q
    |||||||||||||| |||| |||||||||||||| |||         |||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  18466616 cataaatttggaacaaataccacactgaagatactttt-----ttttctcctttagtgaaagaatatttgcatcaaaaatataatattccctttcaaaat 18466522  T
Q  214 atatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 282  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18466521 atatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatttttagca 18466453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 113 - 360
Target Start/End: Complemental strand, 18596584 - 18596328
Alignment:
Q  113 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 212  Q
    |||||||||||||||||||| ||||||||||||||||||         |||||||||||| |||||||||| || ||||||||||||||| |||||||||    
T  18596584 tcataaatttggaacgaataccacactgaagatacgttt--tttttttctccttcagtgatagaatatttgtatcaaaaatataatattctctttcaaaa 18596487  T
Q  213 tatatttgcatcaaatcgtccttcatacgatacaaaaatatat-----------ttattgtccataaatatattttcagcacaaaatatctttgnnnnnn 301  Q
    ||||||||||||||||||| ||| ||||| |||||||||||||           |||||||||||||||||||||||| |||||||||| ||||          
T  18596486 tatatttgcatcaaatcgttctttatacggtacaaaaatatatttatggtatatttattgtccataaatatattttcaacacaaaatatatttgaaacaa 18596387  T
Q  302 ntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
     |||||||||||||||||||||||||||| | ||||||||||||||||||||| |||||    
T  18596386 atcttttatatttttagcaacaatattctccatccatcaaattttgagtcatagtacaa 18596328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 179 - 360
Target Start/End: Complemental strand, 21288713 - 21288531
Alignment:
Q  179 atttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgata-caaaaatatatttattgtccataaatatatttt 277  Q
    |||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||||| || | |||||||||||||||||||||||||||||||    
T  21288713 atttgcatcaaaaatataatattccctttcaaaatatatttgcataaaatcgttcttcatacggtaccgaaaatatatttattgtccataaatatatttt 21288614  T
Q  278 cagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    ||||||||||||| |||        |||||| ||||||||||||||||||||| | ||||||||||||||||| |||||||||    
T  21288613 cagcacaaaatatattttaaacaaatcttttttatttttagcaacaatattctccatccatcaaattttgagttatactacaa 21288531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 210 - 355
Target Start/End: Original strand, 17415748 - 17415893
Alignment:
Q  210 aaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntctttta 309  Q
    |||||||||||||||||||  ||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||| ||||       |||||||    
T  17415748 aaatatatttgcatcaaattttccttcatacagtacaaaaatatatttattgtccataaatatattttcagcaaaaaatatatttgaaacaaatctttta 17415847  T
Q  310 tatttttagcaacaatattcttcttccatcaaattttgagtcatac 355  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  17415848 tatttttagcaacaatattcttcatccatcaaattttgagtcatac 17415893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 113 - 282
Target Start/End: Complemental strand, 15143425 - 15143262
Alignment:
Q  113 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnc-tccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaa 211  Q
    ||||||||||| |||| ||||||| |||||||||||||||        | | ||||||||||||||||||||||| |||       ||||||||||||||    
T  15143425 tcataaatttgtaacggatatcacgctgaagatacgtttcttttttccccttcttcagtgaaagaatatttgcatcaaa-------tattccctttcaaa 15143333  T
Q  212 atatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 282  Q
    |||||||||||||||||| ||||||||| | ||||||||| ||||||||||||||||||||||||| ||||    
T  15143332 atatatttgcatcaaatcttccttcatatggtacaaaaatgtatttattgtccataaatatatttttagca 15143262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 4410084 - 4410012
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  4410084 tgttgcctttctaaacccttgtttcagccccctctatctctct--caaagtttgctctgatacaaggtctatatt 4410012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 258 - 360
Target Start/End: Original strand, 6661929 - 6662031
Alignment:
Q  258 attgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatacta 357  Q
    |||||||||||||||||||||| |||||||||| ||||       | |||||||||||||||||||||||||||| |||||||| |||| ||||||||||    
T  6661929 attgtccataaatatattttcaacacaaaatatatttgaaacaaatattttatatttttagcaacaatattcttcatccatcaagttttaagtcatacta 6662028  T
Q  358 caa 360  Q
    |||    
T  6662029 caa 6662031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 161 - 229
Target Start/End: Complemental strand, 40221408 - 40221340
Alignment:
Q  161 ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatc 229  Q
    ||||| |||||||||||||||||||| |||||||||||||||| |||||||||||||||| | ||||||    
T  40221408 ctcctgcagtgaaagaatatttgcatcaaaaatataatattccttttcaaaatatatttgaaacaaatc 40221340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 25921729 - 25921797
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    ||||| |||||||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||||    
T  25921729 tgttgtctttctaaacccttgtttcagccccctctatct------caaagtttgctctgatacaaggtctatatt 25921797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 31542758 - 31542690
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||||||||||||||||      ||||||||||| ||||||||||||||||||    
T  31542758 tgttgcctttctaaacccttgtttcagccccctctatct------caaagtttgctttgatacaaggtctatatt 31542690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 6747329 - 6747259
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||| |||||||||||||||||||||||||||||||||| || |    |||||||||||||||||||||||||    
T  6747329 tgttgcttttctaaacccttgtttcagccccctctatctctttctc----tttgctctgatacaaggtctatatt 6747259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 303 - 360
Target Start/End: Complemental strand, 40221341 - 40221284
Alignment:
Q  303 tcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    |||||||||||||||||||||||||||||| || || |||||||||||||||||||||    
T  40221341 tcttttatatttttagcaacaatattcttcatcaattaaattttgagtcatactacaa 40221284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 1189865 - 1189938
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgc-tctgatacaaggtctatatt 89  Q
    |||||||||||||||| ||||||||||||||||||||||||||  ||| |||| | ||||||||||||||||||||    
T  1189865 tgttgcctttctaaactcttgtttcagccccctctatctctct--caaggtttacatctgatacaaggtctatatt 1189938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 308 - 360
Target Start/End: Complemental strand, 18466465 - 18466413
Alignment:
Q  308 tatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  18466465 tatatttttagcaacaatattctccatccatcaaattttgagtcatactacaa 18466413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 2818592 - 2818660
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||| ||||||||||||||||||||||||||||||||||      |||||||| |||||||||||||||||||||    
T  2818592 tgttacctttctaaacccttgtttcagccccctctatct------caaagtttactctgatacaaggtctatatt 2818660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 10529355 - 10529423
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||| ||| ||||||||      ||||||||||||||||||||||||||||||    
T  10529355 tgttgcctttctaaacccttgtttcaacccactctatct------caaagtttgctctgatacaaggtctatatt 10529423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 16776181 - 16776113
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||| ||||||||||||||||||||||||||||      |||||||||||| |||||||||||||||||    
T  16776181 tgttgcctttgtaaacccttgtttcagccccctctatct------caaagtttgctcagatacaaggtctatatt 16776113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 20507718 - 20507786
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||||||||||||||||      |||||||| |||||||||||| ||||||||    
T  20507718 tgttgcctttctaaacccttgtttcagccccctctatct------caaagtttactctgatacaagatctatatt 20507786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 31545103 - 31545035
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    ||||||||||||||||||||||||||||||||| |||||      ||||||||||| ||||||||||||||||||    
T  31545103 tgttgcctttctaaacccttgtttcagccccctttatct------caaagtttgctttgatacaaggtctatatt 31545035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 34477310 - 34477353
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctc 58  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  34477310 tgttgcctttctaaacccttgtttcagccccctctatctctctc 34477353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 34479675 - 34479718
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctc 58  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  34479675 tgttgcctttctaaacccttgtttcagccccctctatctctctc 34479718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 39854506 - 39854439
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    ||||||||||||||||||||||||||| |||||||||||      ||||||||||||||||||||||||||||||    
T  39854506 tgttgcctttctaaacccttgtttcag-cccctctatct------caaagtttgctctgatacaaggtctatatt 39854439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 38882129 - 38882060
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    ||||||||||||||||||||||||||||||||     |||| || | ||||||||||||||||||||||||||||    
T  38882129 tgttgcctttctaaacccttgtttcagccccc-----ctctatctccaagtttgctctgatacaaggtctatatt 38882060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 308 - 357
Target Start/End: Complemental strand, 15143274 - 15143225
Alignment:
Q  308 tatatttttagcaacaatattcttcttccatcaaattttgagtcatacta 357  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  15143274 tatatttttagcaacaatattctccatccatcaaattttgagtcatacta 15143225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 21684707 - 21684785
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgc----aaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |    |||||||   |||||||||||||||||||    
T  21684707 tgttgcctttttaaacccttgtttcagccccctctatctctctctctctcaaagtttagcctgatacaaggtctatatt 21684785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 2174942 - 2174903
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  2174942 tgttgcctttctaaacccttgtttcagccccctctatctc 2174903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 4236652 - 4236584
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||| |||||||||||||||| |||||      | ||||||||||||||||||||||||||||    
T  4236652 tgttgcctttctaaactcttgtttcagccccctttatct------ccaagtttgctctgatacaaggtctatatt 4236584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 10586865 - 10586794
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    ||||||| ||||||||||||||||||| |||||||||||||||  ||||||||   |||||||||||||||||||    
T  10586865 tgttgccattctaaacccttgtttcag-cccctctatctctct--caaagtttagcctgatacaaggtctatatt 10586794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 31179627 - 31179695
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||||| ||||||||||      ||||||||||| |||||||| |||||||||    
T  31179627 tgttgcctttctaaacccttgtttcagctccctctatct------caaagtttgctttgatacaatgtctatatt 31179695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 15552268 - 15552190
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgc----aaagtttgctctgatacaaggtctatatt 89  Q
    |||||| |||||||||||||||||||| |||||||||||||||| |    |||||||   |||||||||||||||||||    
T  15552268 tgttgcttttctaaacccttgtttcagtcccctctatctctctctctctcaaagtttagcctgatacaaggtctatatt 15552190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 56
Target Start/End: Original strand, 16092456 - 16092497
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctc 56  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  16092456 tgttgcctttctaaacccttgtttcaaccccctctatctctc 16092497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 17072906 - 17072867
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  17072906 tgttgtctttctaaacccttgtttcagccccctctatctc 17072867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 20043073 - 20043034
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  20043073 tgttgcctttctaaacacttgtttcagccccctctatctc 20043034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 25904126 - 25904087
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  25904126 tgttgtctttctaaacccttgtttcagccccctctatctc 25904087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 31472869 - 31472908
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  31472869 tgttgcctttctaaacccttgttttagccccctctatctc 31472908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 40221545 - 40221506
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  40221545 tgttgccattctaaacccttgtttcagccccctctatctc 40221506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 6745092 - 6745016
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctcta--tctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||| ||||||||| |||||||||||||||| ||  |||||||| |    |||||||||||||||||||||||||    
T  6745092 tgttgcttttctaaacacttgtttcagccccctttatctctctctctctctctttgctctgatacaaggtctatatt 6745016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 18509582 - 18509643
Alignment:
Q  23 ttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    ||||||||||||||||||| |||||||||||||    ||||||||  ||||||||||||||||||||    
T  18509582 ttctaaacccttgtttcag-cccctctatctct----caaagtttagtctgatacaaggtctatatt 18509643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 25804048 - 25803971
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc----tctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    ||||||| |||||||||||||||| |||||||||||||||    |||| |||| || || |||||||||||||||||||    
T  25804048 tgttgccattctaaacccttgtttgagccccctctatctctctctctctcaaatttagc-ctgatacaaggtctatatt 25803971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 10474579 - 10474615
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctat 51  Q
    ||||||||||||||| |||||||||||||||||||||    
T  10474579 tgttgcctttctaaatccttgtttcagccccctctat 10474615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 695912 - 695873
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    |||||||||||||||||||||||||| |||||| ||||||    
T  695912 tgttgcctttctaaacccttgtttcatccccctttatctc 695873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 6756517 - 6756478
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||| |||||||||| |||||||||||    
T  6756517 tgttgcctttctaaaccattgtttcagctccctctatctc 6756478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 26098507 - 26098546
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||| |||||||||||| |||||||||||||||||||    
T  26098507 tgttgccattctaaacccttatttcagccccctctatctc 26098546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 34530922 - 34530961
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    |||||| ||||||||| |||||||||||||||||||||||    
T  34530922 tgttgcatttctaaacacttgtttcagccccctctatctc 34530961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 23 - 54
Target Start/End: Original strand, 36402592 - 36402623
Alignment:
Q  23 ttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||    
T  36402592 ttctaaacccttgtttcagccccctctatctc 36402623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 39398249 - 39398287
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  39398249 tgttgcctttctaaacccttgtttcag-cccctctatctc 39398287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 238
Target Start/End: Original strand, 6661594 - 6661636
Alignment:
Q  196 aatattccctttcaaaatatatttgcatcaaatcgtccttcat 238  Q
    |||||||||||||||||||||||| | ||||||| ||||||||    
T  6661594 aatattccctttcaaaatatatttacttcaaatcttccttcat 6661636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 54
Target Start/End: Original strand, 37706037 - 37706075
Alignment:
Q  16 gttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    |||||||||||||||| || |||||||||||||||||||    
T  37706037 gttgcctttctaaacctttatttcagccccctctatctc 37706075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 151
Target Start/End: Complemental strand, 40221461 - 40221423
Alignment:
Q  113 tcataaatttggaacgaatatcacactgaagatacgttt 151  Q
    |||||||||| ||||| ||||||||||||||||||||||    
T  40221461 tcataaatttagaacggatatcacactgaagatacgttt 40221423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 88
Target Start/End: Complemental strand, 4897742 - 4897674
Alignment:
Q  22 tttctaaacccttgtttcag--ccccctctatctctctcgcaaagtttgctctgatacaaggtctatat 88  Q
    ||||||||||||||||||||  | | |||| |||||||| ||| |||| ||||||| ||||||||||||    
T  4897742 tttctaaacccttgtttcagctctctctctctctctctctcaaggtttactctgatgcaaggtctatat 4897674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 352
Target Start/End: Original strand, 5779168 - 5779217
Alignment:
Q  303 tcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 352  Q
    ||||||||||||||||||| ||| |||||| || |||||||||| |||||    
T  5779168 tcttttatatttttagcaataatcttcttcatctatcaaattttaagtca 5779217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 89
Target Start/End: Original strand, 15354770 - 15354806
Alignment:
Q  53 tctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||| ||||||||||| ||||||||||||||||||    
T  15354770 tctctcccaaagtttgctttgatacaaggtctatatt 15354806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 89
Target Start/End: Original strand, 15357046 - 15357082
Alignment:
Q  53 tctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||| ||||||||||| ||||||||||||||||||    
T  15357046 tctctcccaaagtttgctttgatacaaggtctatatt 15357082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 282
Target Start/End: Complemental strand, 32520316 - 32520241
Alignment:
Q  209 aaaatatatttgcatcaaatcgtccttcatacgatacaaaaatata--tttattgtccataaatatattttcagca 282  Q
    ||||||| ||||||||||||  | |||| |||| ||||||||||||  |||| | | |||||||||||||||||||    
T  32520316 aaaatatgtttgcatcaaatttttcttcgtacggtacaaaaatatatttttactctacataaatatattttcagca 32520241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0511 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: scaffold0511
Description:

Target: scaffold0511; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 15 - 360
Target Start/End: Complemental strand, 2074 - 1737
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatattcaccgccaatgagatggacatcatc 114  Q
    ||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||| ||| |||||||||||||| |  |    ||| | | | | | |     
T  2074 tgttgcctttctaaacccttgtttcagccccctatatctttctctcaaagtttgctatgaaacaaggtctatatttatag----tgaaa-gtataactt- 1981  T
Q  115 ataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaata 214  Q
    |||||||||||||||||| ||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1980 ataaatttggaacgaataccacactgaagatacgttt--tttttttctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaata 1883  T
Q  215 tatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatattt 314  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||    
T  1882 tatttgcatcaaatcttccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattt 1783  T
Q  315 ttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
T  1782 ttagcaacaatattcttcttccttcaaattttgagtcatactacaa 1737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 189; Significance: 1e-102; HSPs: 82)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 15 - 360
Target Start/End: Original strand, 7094678 - 7095013
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatattcaccgccaatgagatggacatcatc 114  Q
    ||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| |     ||| | |   | | | ||    
T  7094678 tgttgccattctaaacccttgtttcagccccctctatctctctc--aaagtttgctctgatacaaggtctatatttat----aataa-acatataac-tc 7094769  T
Q  115 ataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaata 214  Q
    |||||||||||||||||| ||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  7094770 ataaatttggaacgaataccacactgaagatacgttt--ttttttcctccttcagtgaaagaatatttgcataaaaaatataatatttcctttcaaaata 7094867  T
Q  215 tatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatattt 314  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||    
T  7094868 tatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattt 7094967  T
Q  315 ttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    |||||||||||||||| | |||||||||||||||||||||||||||    
T  7094968 ttagcaacaatattctccatccatcaaattttgagtcatactacaa 7095013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 23 - 386
Target Start/End: Original strand, 7092439 - 7092792
Alignment:
Q  23 ttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatattcaccgccaatgagatggacatca-tcataaatt 121  Q
    |||||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||||||| |  |  ||        | || | |||||||||    
T  7092439 ttctaaacccttgtttcagccccctccatctctctc--aaagtttgctctgatacaaggtctatatttatagtaaac-------atataactcataaatt 7092529  T
Q  122 tggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgc 221  Q
    ||||||||||| ||||||||||||||  ||         |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  7092530 tggaacgaataccacactgaagatacaatt--ttttttcctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgc 7092627  T
Q  222 atcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaa 321  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||       |||||||||||||||||||    
T  7092628 atcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatcttcagcacaaaatatatttgaaacaaatcttttatatttttagcaa 7092727  T
Q  322 caatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattag 386  Q
    ||||||||| | ||||||||||||||||||||||||||| |||||| |||||||||| |||||||    
T  7092728 caatattctccatccatcaaattttgagtcatactacaacattctccaccttgactctaaattag 7092792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 113 - 386
Target Start/End: Complemental strand, 20299401 - 20299131
Alignment:
Q  113 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 212  Q
    |||||||| |||||| |||| ||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  20299401 tcataaatatggaacaaataccacactgaagatacgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 20299305  T
Q  213 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 312  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||    
T  20299304 tatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaataaatcttttatat 20299205  T
Q  313 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattag 386  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||| |||||| |||||||||| |||||||    
T  20299204 ttttagcaacaatattctccatccatcaaattttgagtcatactacaacattctccaccttgactctaaattag 20299131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 15 - 384
Target Start/End: Original strand, 7470278 - 7470643
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatattcaccgccaatgagatggacatca-t 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||  |||||||||||||||||||| |  |  ||        | || | |    
T  7470278 tgttgcctttctaaacccttgtttcagccccctctatctctctc--aaagtttagtctgatacaaggtctatatttatagtaaac-------atataact 7470368  T
Q  114 cataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnn----ctccttcagtgaaagaatatttgcataaaaaatataatattccctttca 209  Q
    ||||||||||||||||||| ||||||||||||||||||             |||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  7470369 cataaatttggaacgaataccacactgaagatacgtttttttttttcttttctccttcaatgaaagaatatttgcatcaaaaatataatattccctttca 7470468  T
Q  210 aaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntctttta 309  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       | |||||    
T  7470469 aaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatgtttta 7470568  T
Q  310 tatttttagcaacaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaatt 384  Q
    |||||||||||| |||||||| | ||||||||||||||||||||||||||| |||||| |||||||||| |||||    
T  7470569 tatttttagcaataatattctccatccatcaaattttgagtcatactacaacattctccaccttgactctaaatt 7470643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 15 - 386
Target Start/End: Complemental strand, 28487586 - 28487225
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatattcaccgccaatgagatggacatcatc 114  Q
    |||| |||||||||||||||||||||||||||||||||||||||  |||||||   |||||||| |||||||||| |  |     || | | | | | ||    
T  28487586 tgttacctttctaaacccttgtttcagccccctctatctctctc--aaagtttagcctgatacatggtctatatttatag-----gaaaagtataac-tc 28487495  T
Q  115 ataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaata 214  Q
    |||||||| |||| |||| ||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  28487494 ataaatttagaacaaataccacactgaagatacgttt--tttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaata 28487397  T
Q  215 tatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatattt 314  Q
    ||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||    
T  28487396 tatttgcatcaaatcattcttcatacgatacaaaattatatttattgtccataaatatattttcagcacaaaatatatttgaagcaaatcttttatattt 28487297  T
Q  315 ttagcaacaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattag 386  Q
    |||||||||||||||| | ||||||||||||||||||||||||||| |||||| |||||||||| |||||||    
T  28487296 ttagcaacaatattctccatccatcaaattttgagtcatactacaacattctccaccttgactctaaattag 28487225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 15 - 386
Target Start/End: Original strand, 7349529 - 7349891
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatattcaccgccaatgagatggacatcatc 114  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||||||   ||||||||||||||||||| |  |  || |      | | | ||    
T  7349529 tgttgcctttctaaacccctgtttcagccccctctatctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagt-----ataac-tc 7349622  T
Q  115 ataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaata 214  Q
    ||||||||||||| |||||||||||||||||||||||         ||| |||||||||||||||||||| | ||||||||||||||| |||||||||||    
T  7349623 ataaatttggaacaaatatcacactgaagatacgttt---ttttttctcattcagtgaaagaatatttgcctcaaaaatataatattctctttcaaaata 7349719  T
Q  215 tatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatattt 314  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||       ||||||||||||    
T  7349720 tatttgcatcaaatcgttcttcatgcgatacaaaaatatatttattgtccataaatatattttcagcacaatatatatttgaaacaaatcttttatattt 7349819  T
Q  315 ttagcaacaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattag 386  Q
    |||||||||||||||| | |||||||| |||||||||||||||||| |||||| |||||||||| |||||||    
T  7349820 ttagcaacaatattctccatccatcaatttttgagtcatactacaacattctccaccttgactctaaattag 7349891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 15 - 360
Target Start/End: Complemental strand, 3035754 - 3035417
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatattcaccgccaatgagatggacatcatc 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||   ||||||||||||||||||| |  |  || |      | | | ||    
T  3035754 tgttgcctttctaaacccttgtttcagccccctctatctctctc--aaagtttagcctgatacaaggtctatatttatagtaaaagt-----ataac-tc 3035663  T
Q  115 ataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaata 214  Q
    ||||||||||||| |||| || |||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  3035662 ataaatttggaacaaataccatactgaagatacgttttttttctttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaata 3035563  T
Q  215 tatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatattt 314  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||    
T  3035562 tatttgcatcaaatcattcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattt 3035463  T
Q  315 ttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    |||||||||||||||| | |||||||||||||||||||||||||||    
T  3035462 ttagcaacaatattctccatccatcaaattttgagtcatactacaa 3035417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 113 - 360
Target Start/End: Complemental strand, 1849912 - 1849667
Alignment:
Q  113 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 212  Q
    ||||||||||||||| |||| |||||||||||| |||||         |||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  1849912 tcataaatttggaacaaataccacactgaagattcgttt--tttttttctccttcagtgaaagaatatctgcatcaaaaatataatattccctttcaaaa 1849815  T
Q  213 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||    
T  1849814 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatat 1849715  T
Q  313 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  1849714 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 1849667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 15 - 357
Target Start/End: Complemental strand, 20626071 - 20625739
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatattcaccgccaatgagatggacatcatc 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||  ||||||| |||||||||||| |     ||| | |   | | | ||    
T  20626071 tgttgcctttctaaacccttgtttcagccccctctatctctctc--aaagtttagtctgatagaaggtctatatttat----aataa-acatataac-tc 20625980  T
Q  115 ataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaata 214  Q
    |||||||||||||||||| ||||||||||||||||||         |||||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  20625979 ataaatttggaacgaataccacactgaagatacgttt--ttttttgctccttcagtgaaaaaatatttgcatcaaaaatataatattccctttcaaaata 20625882  T
Q  215 tatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatattt 314  Q
    |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||    
T  20625881 tatttgtatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattt 20625782  T
Q  315 ttagcaacaatattcttcttccatcaaattttgagtcatacta 357  Q
    |||||||||||||||| | ||||||||||||||||||||||||    
T  20625781 ttagcaacaatattctccatccatcaaattttgagtcatacta 20625739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 15 - 357
Target Start/End: Complemental strand, 20629962 - 20629630
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatattcaccgccaatgagatggacatcatc 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||  ||||||| |||||||||||| |     ||| | |   | | | ||    
T  20629962 tgttgcctttctaaacccttgtttcagccccctctatctctctc--aaagtttagtctgatagaaggtctatatttat----aataa-acatataac-tc 20629871  T
Q  115 ataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaata 214  Q
    |||||||||||||||||| ||||||||||||||||||         |||||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  20629870 ataaatttggaacgaataccacactgaagatacgttt--ttttttgctccttcagtgaaaaaatatttgcatcaaaaatataatattccctttcaaaata 20629773  T
Q  215 tatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatattt 314  Q
    |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||    
T  20629772 tatttgtatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattt 20629673  T
Q  315 ttagcaacaatattcttcttccatcaaattttgagtcatacta 357  Q
    |||||||||||||||| | ||||||||||||||||||||||||    
T  20629672 ttagcaacaatattctccatccatcaaattttgagtcatacta 20629630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 15 - 357
Target Start/End: Complemental strand, 20642381 - 20642049
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatattcaccgccaatgagatggacatcatc 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||  ||||||| |||||||||||| |     ||| | |   | | | ||    
T  20642381 tgttgcctttctaaacccttgtttcagccccctctatctctctc--aaagtttagtctgatagaaggtctatatttat----aataa-acatataac-tc 20642290  T
Q  115 ataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaata 214  Q
    |||||||||||||||||| ||||||||||||||||||         |||||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  20642289 ataaatttggaacgaataccacactgaagatacgttt--ttttttgctccttcagtgaaaaaatatttgcatcaaaaatataatattccctttcaaaata 20642192  T
Q  215 tatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatattt 314  Q
    |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||    
T  20642191 tatttgtatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattt 20642092  T
Q  315 ttagcaacaatattcttcttccatcaaattttgagtcatacta 357  Q
    |||||||||||||||| | ||||||||||||||||||||||||    
T  20642091 ttagcaacaatattctccatccatcaaattttgagtcatacta 20642049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 113 - 386
Target Start/End: Original strand, 31156253 - 31156524
Alignment:
Q  113 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 212  Q
    ||||||||||||||| |||| |||||||||||| |||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  31156253 tcataaatttggaacaaataccacactgaagattcgttt--tttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 31156350  T
Q  213 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 312  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||       ||||||||||    
T  31156351 tatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaatatatatttgaaacaaatcttttatat 31156450  T
Q  313 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattag 386  Q
    |||||||||||||||||| | |||||||| |||||||||||||||||| |||||| |||||||||| |||||||    
T  31156451 ttttagcaacaatattctccatccatcaatttttgagtcatactacaacattctccaccttgactctaaattag 31156524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 113 - 386
Target Start/End: Complemental strand, 38396233 - 38395962
Alignment:
Q  113 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 212  Q
    ||||||||||||||| |||| ||||| ||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  38396233 tcataaatttggaacaaataccacaccgaagatacgttt--tttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 38396136  T
Q  213 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 312  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||       ||||||||||    
T  38396135 tatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtacataaatatattttcagcacaaaatatatttgaaacaaatcttttatat 38396036  T
Q  313 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattag 386  Q
    |||||||||||||||||| | |||||||||||| |||||||||||||| |||||| |||||||||| |||||||    
T  38396035 ttttagcaacaatattctccatccatcaaatttggagtcatactacaacattctccaccttgactctaaattag 38395962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 113 - 360
Target Start/End: Complemental strand, 1606417 - 1606173
Alignment:
Q  113 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 212  Q
    ||||||||||||||| |||| |||||||||||| |||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  1606417 tcataaatttggaacaaataccacactgaagattcgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 1606321  T
Q  213 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 312  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||       ||||||||||    
T  1606320 tatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaatatatatttgaaacaaatcttttatat 1606221  T
Q  313 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  1606220 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 1606173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 15 - 360
Target Start/End: Original strand, 7351908 - 7352244
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatattcaccgccaatgagatggacatcatc 114  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||   |||||||||||| |||||| |  |  || |      | | | ||    
T  7351908 tgttgcctttctaaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaaggtttatatttatagtaaaagt-----ataac-tc 7352001  T
Q  115 ataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaata 214  Q
    ||||||||||||| |||||||||||||||||||||||         ||| |||||||||||||||||||| | |||||||||||||||||||||||||||    
T  7352002 ataaatttggaacaaatatcacactgaagatacgttt---ttttttctcattcagtgaaagaatatttgcctcaaaaatataatattccctttcaaaata 7352098  T
Q  215 tatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatattt 314  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||       ||||||||||||    
T  7352099 tatttgcatcaaatcgttcttcatgcgatacaaaaatatatttattgtccataaatatattttcagcacaatatatatttgaaacaaatcttttatattt 7352198  T
Q  315 ttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    |||||||||||||||| | |||||||| ||||||||||||||||||    
T  7352199 ttagcaacaatattctccatccatcaatttttgagtcatactacaa 7352244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 15 - 360
Target Start/End: Original strand, 7472236 - 7472572
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatattcaccgccaatgagatggacatca-t 113  Q
    |||||| |||||||||||||||||||||||||||||||||||||  |||||||  |||||||||||||||||||| |  |  ||        | || | |    
T  7472236 tgttgcttttctaaacccttgtttcagccccctctatctctctc--aaagtttagtctgatacaaggtctatatttatagtaaac-------atataact 7472326  T
Q  114 cataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaat 213  Q
    |||||||||||||| |||| ||||||||||||||||||         |||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  7472327 cataaatttggaacaaataccacactgaagatacgttt-ttttttttctccttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaat 7472425  T
Q  214 atatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatt 313  Q
    |||||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||       |||||||||||    
T  7472426 atatttgcatcaaatcgttcttcatatgatacaataatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatt 7472525  T
Q  314 tttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||    
T  7472526 tttagcaacaatattctccatccatcaaattttgagtcatactacaa 7472572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 113 - 360
Target Start/End: Complemental strand, 11757171 - 11756927
Alignment:
Q  113 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 212  Q
    ||||||||||||||| |||| ||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  11757171 tcataaatttggaacaaataccacactgaagatacgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 11757075  T
Q  213 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 312  Q
    |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||    
T  11757074 tatatttgcatcaaatagttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatat 11756975  T
Q  313 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||    
T  11756974 ttttagcaacaatattctccatccatcaaattttgagtcatactacaa 11756927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 15 - 360
Target Start/End: Complemental strand, 28485599 - 28485263
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatattcaccgccaatgagatggacatcatc 114  Q
    |||||||||||||||||||||||||| |||| ||||||||||||  |||||||   ||||||||||||||||||| |  |  || |      | | | ||    
T  28485599 tgttgcctttctaaacccttgtttcaaccccttctatctctctc--aaagtttagcctgatacaaggtctatatttatagtaaaagt-----ataac-tc 28485508  T
Q  115 ataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaata 214  Q
    ||||||||||||| |||| |||||||||||||||| |         ||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  28485507 ataaatttggaacaaataccacactgaagatacgtgt-tttttttcctccttcggtgaaagaatatttgcatcaaaaatataatattccctttcaaaata 28485409  T
Q  215 tatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatattt 314  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       | ||||||||||    
T  28485408 tatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatattttatattt 28485309  T
Q  315 ttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||    
T  28485308 ttagcaacaatattcttcatccatcaaattttgaatcatactacaa 28485263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 162 - 360
Target Start/End: Complemental strand, 47865528 - 47865330
Alignment:
Q  162 tccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattg 261  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  47865528 tccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattg 47865429  T
Q  262 tccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    ||||||||||||||||||||||||||||| ||||       |||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||    
T  47865428 tccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatttggagtcatactacaa 47865330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 113 - 360
Target Start/End: Complemental strand, 18345484 - 18345239
Alignment:
Q  113 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 212  Q
    ||||||||||||||| |||| ||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  18345484 tcataaatttggaacaaataccacactgaagatacgttt--tttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccatttcaaaa 18345387  T
Q  213 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 312  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||| ||||       ||||||||||    
T  18345386 tatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtcaataaatatatttttagcacaaaatatatttgaaacaaatcttttatat 18345287  T
Q  313 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||    
T  18345286 ttttagcaacaatattctccatccatcaaattttgagtcatactacaa 18345239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 113 - 360
Target Start/End: Original strand, 37412470 - 37412714
Alignment:
Q  113 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 212  Q
    |||||||||||||||||||| ||||||||||||||||||         ||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  37412470 tcataaatttggaacgaataacacactgaagatacgttt---ttttttctccttcagtggaagaatatttgcatcaaaaatataatattccctttcaaaa 37412566  T
Q  213 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 312  Q
    ||||||||||||||||| | ||||||||| |||| || |||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||    
T  37412567 tatatttgcatcaaatcattcttcatacgttacataattatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatat 37412666  T
Q  313 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||    
T  37412667 ttttagcaacaatattctccatccatcaaattttgagtcatactacaa 37412714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 15 - 360
Target Start/End: Complemental strand, 38394019 - 38393685
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatattcaccgccaatgagatggacatcatc 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||   ||||||||||||||||||| |  |  || |      | | | ||    
T  38394019 tgttgcctttctaaacccttgtttcagccccctctatctctctc--aaagtttagcctgatacaaggtctatatttatagtaaaagt-----ataac-tc 38393928  T
Q  115 ataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaata 214  Q
    ||||||||||||| |||| |||||||||||||||||          | |||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  38393927 ataaatttggaacaaataccacactgaagatacgtt---attttttcaccttcagtgaaagaatatttgcatcaaaaatataacattccctttcaaaata 38393831  T
Q  215 tatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatattt 314  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||       |||| |||||||    
T  38393830 tatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaataaattttcagcacaaaatatatttgaaacaaatcttatatattt 38393731  T
Q  315 ttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    |||||||||||||||| | |||||||||||| || |||||||||||    
T  38393730 ttagcaacaatattctccatccatcaaatttagaatcatactacaa 38393685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 113 - 360
Target Start/End: Original strand, 21470637 - 21470881
Alignment:
Q  113 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 212  Q
    ||||||||||||||| |||| ||||| ||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  21470637 tcataaatttggaacaaataccacaccgaagatacgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 21470733  T
Q  213 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 312  Q
    |||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||    
T  21470734 tatattcgcatcaaatcgttcttcatacgatataaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatat 21470833  T
Q  313 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    |||||||||||||||||| | |||||||||||| |||||| |||||||    
T  21470834 ttttagcaacaatattctccatccatcaaatttggagtcaaactacaa 21470881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 161 - 354
Target Start/End: Complemental strand, 24258358 - 24258166
Alignment:
Q  161 ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttatt 260  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||    
T  24258358 ctccttcagtgaaagaatatttacatcaaaaatataatattccctttcaaaatatatttgcatcaa-tcgtccttcatactgtacaaaaatatatttatt 24258260  T
Q  261 gtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcata 354  Q
    |||||||||||||||||||||||||||||| ||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24258259 gtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcata 24258166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 113 - 360
Target Start/End: Complemental strand, 21990098 - 21989855
Alignment:
Q  113 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 212  Q
    |||||||||||||||||||| ||||| ||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  21990098 tcataaatttggaacgaataccacacagaagatacgttt--ttttttcctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 21990001  T
Q  213 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 312  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||  ||| ||||| ||||       ||||||||||    
T  21990000 tatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttca--acacaatatatttgaaacaaatcttttatat 21989903  T
Q  313 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    |||||||||||||||||| | |||||||||||||| ||||||||||||    
T  21989902 ttttagcaacaatattctccatccatcaaattttgggtcatactacaa 21989855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 113 - 360
Target Start/End: Original strand, 42331341 - 42331591
Alignment:
Q  113 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnn---ctccttcagtgaaagaatatttgcataaaaaatataatattccctttca 209  Q
    |||||||||||||||||||| |||||| |||||||||||            |||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  42331341 tcataaatttggaacgaataccacactaaagatacgtttttttttttctttctccttcaatgaaagaatatttgcatcaaaaatataatattccctttca 42331440  T
Q  210 aaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntctttta 309  Q
    |||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| |||        |||||||    
T  42331441 aaatatatttgcatcaaatcgttcttcatacggtacaaaaatatacttattgtccataaatatattttcagcacaaaatatatttaaaacaaatctttta 42331540  T
Q  310 tatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    ||||||||||||||||||||||| | ||||||||||| |||||||||||||    
T  42331541 tatttttagcaacaatattcttcattcatcaaattttaagtcatactacaa 42331591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 113 - 290
Target Start/End: Original strand, 13099818 - 13099993
Alignment:
Q  113 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 212  Q
    |||||||||||||||||||| ||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  13099818 tcataaatttggaacgaataccacactgaagatacgttt--tttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 13099915  T
Q  213 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatat 290  Q
    |||||||| |||||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  13099916 tatatttgtatcaaatcgttcttcatacggtacgaaaatatatttattgtccataaatatattttcagcacaaaatat 13099993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 161 - 282
Target Start/End: Original strand, 43253914 - 43254035
Alignment:
Q  161 ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttatt 260  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  43253914 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttatt 43254013  T
Q  261 gtccataaatatattttcagca 282  Q
    ||||||||||||||||| ||||    
T  43254014 gtccataaatatatttttagca 43254035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 113 - 360
Target Start/End: Complemental strand, 3677227 - 3676999
Alignment:
Q  113 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 212  Q
    |||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  3677227 tcataaatttggaacgaatatcacactgaagatacgttttttttttctctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 3677128  T
Q  213 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 312  Q
    ||||||||||||||||||| ||||||||| |||||||||||                   |||||||||||||||||| ||||       ||||||||||    
T  3677127 tatatttgcatcaaatcgttcttcatacggtacaaaaatat-------------------attttcagcacaaaatatatttgaaacaaatcttttatat 3677047  T
Q  313 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    |||||||||||||||||| | || ||||||||||||||||||||||||    
T  3677046 ttttagcaacaatattctccatctatcaaattttgagtcatactacaa 3676999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 214 - 360
Target Start/End: Complemental strand, 443474 - 443328
Alignment:
Q  214 atatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatt 313  Q
    ||||||||||||||| || ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||       |||||||||||    
T  443474 atatttgcatcaaattgttcttcagacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatt 443375  T
Q  314 tttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||    
T  443374 tttagcaacaatattctccatccatcaaattttgagtcatactacaa 443328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 116 - 258
Target Start/End: Complemental strand, 20297302 - 20297163
Alignment:
Q  116 taaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatat 215  Q
    |||||||||||| |||| ||||||||||||||||||         ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  20297302 taaatttggaacaaataccacactgaagatacgttt---ttttttctccttcggtgaaagaatatttgcatcaaaaatataatattccctttcaaaatat 20297206  T
Q  216 atttgcatcaaatcgtccttcatacgatacaaaaatatattta 258  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  20297205 atttgcatcaaatcgttcttcatacgatacaaaaatatattta 20297163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 196 - 359
Target Start/End: Original strand, 40281824 - 40281989
Alignment:
Q  196 aatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttg 295  Q
    |||||||| ||| |||||||||  | |||||||  || |||||||| |||||||||||||||||| |||||||||||||||||| |||||||||| ||||    
T  40281824 aatattccttttaaaaatatatccgtatcaaatattctttcatacggtacaaaaatatatttattttccataaatatattttcaacacaaaatatatttg 40281923  T
Q  296 nnnnnnntcttttatatttttagcaacaa--tattcttcttccatcaaattttgagtcatactaca 359  Q
           | ||||||||||||||||||||  | |||||| ||||||||||||||||||||||||||    
T  40281924 aaacaaatattttatatttttagcaacaaattcttcttcatccatcaaattttgagtcatactaca 40281989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 3878610 - 3878540
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    ||||| |||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||    
T  3878610 tgttgtctttctaaacccttgtttcagccccctctatctct----caaagtttgctctgatacaaggtctatatt 3878540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 44597 - 44529
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||||    
T  44597 tgttgcctttctaaacccttgtttcagccccctctatct------caaagtttgctctgatacaaggtctatatt 44529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 48457686 - 48457614
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||||||   |||||||||||||||||||    
T  48457686 tgttgcctttctaaacccttgtttcagccccctctatctctct--caaagtttagcctgatacaaggtctatatt 48457614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 1049551 - 1049619
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||||||||||||||||      ||||||||||||| ||||||||||||||||    
T  1049551 tgttgcctttctaaacccttgtttcagccccctctatct------caaagtttgctctaatacaaggtctatatt 1049619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 27306485 - 27306553
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||||||||||||||||      |||||||| |||||||||||||||||||||    
T  27306485 tgttgcctttctaaacccttgtttcagccccctctatct------caaagtttactctgatacaaggtctatatt 27306553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 196 - 282
Target Start/End: Original strand, 12310442 - 12310528
Alignment:
Q  196 aatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 282  Q
    |||||||| ||| ||||||||||| ||||||||| ||||||||||| |||||||||||||| | ||||| ||| |||| ||||||||    
T  12310442 aatattccttttaaaaatatatttacatcaaatcttccttcatacggtacaaaaatatattaactgtccttaagtataatttcagca 12310528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 35662 - 35594
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    ||||| |||||| ||||||||||||||||||||||||||      ||||||||||||||||||||||||||||||    
T  35662 tgttgtctttctgaacccttgtttcagccccctctatct------caaagtttgctctgatacaaggtctatatt 35594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 1850014 - 1849971
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctc 58  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  1850014 tgttgcctttctaaacccttgtttcagccccctctatctctctc 1849971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 20297395 - 20297323
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    ||||||| |||||||||||||||||||||||||||||||||||  ||||||||   ||||||||||||| |||||    
T  20297395 tgttgccattctaaacccttgtttcagccccctctatctctct--caaagtttagcctgatacaaggtccatatt 20297323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 40946361 - 40946289
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    ||||||||||||||||||||||||||||||||||| || ||||  ||||||||||| ||| ||||||| ||||||    
T  40946361 tgttgcctttctaaacccttgtttcagccccctctgtccctct--caaagtttgctatgaaacaaggtttatatt 40946289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 303 - 352
Target Start/End: Complemental strand, 20297157 - 20297108
Alignment:
Q  303 tcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 352  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||||    
T  20297157 tcttttatatttttagcaacaatattctccatccatcaaattttgagtca 20297108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 9680852 - 9680779
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgc-tctgatacaaggtctatatt 89  Q
    ||||||| |||||||||||||||||| ||||||||||||||||  ||| |||| | ||||||||||||||||||||    
T  9680852 tgttgcccttctaaacccttgtttcaaccccctctatctctct--caaggtttacatctgatacaaggtctatatt 9680779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 11355291 - 11355252
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  11355291 tgttgcctttctaaacccttgtttcagccccctctatctc 11355252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 18345574 - 18345502
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||| ||||||||||||| ||  |||||||    |||||||||||||||||||    
T  18345574 tgttgcctttctaaacccttgtttcaaccccctctatctccct--caaagttcagcctgatacaaggtctatatt 18345502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 18567646 - 18567578
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    ||||||||||||||||||||||||||||||| |||||||      |||||||| |||||||||||| ||||||||    
T  18567646 tgttgcctttctaaacccttgtttcagccccttctatct------caaagtttactctgatacaagatctatatt 18567578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 20137365 - 20137404
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  20137365 tgttgcctttctaaacccttgtttcagccccctctatctc 20137404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 21678099 - 21678060
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  21678099 tgttgcctttctaaacccttgtttcagccccctctatctc 21678060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 21680060 - 21680021
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  21680060 tgttgcctttctaaacccttgtttcagccccctctatctc 21680021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 24258496 - 24258457
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  24258496 tgttgcctttctaaacccttgtttcagccccctctatctc 24258457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 26804602 - 26804563
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  26804602 tgttgcctttctaaacccttgtttcagccccctctatctc 26804563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 31156167 - 31156235
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||||||||||||||||      ||||||||||  ||||||||| ||||||||    
T  31156167 tgttgcctttctaaacccttgtttcagccccctctatct------caaagtttgccttgatacaagctctatatt 31156235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 31435303 - 31435371
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    ||||||||||||||||||||||||||||||| |||||||      |||||||| |||||||||||| ||||||||    
T  31435303 tgttgcctttctaaacccttgtttcagccccttctatct------caaagtttactctgatacaagatctatatt 31435371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 40836998 - 40837066
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||| ||||||||||||| |||||     |||| |||||||||||||||||||||||||    
T  40836998 tgttgcctttctaaacccttctttcagccccctcaatctc-----caaa-tttgctctgatacaaggtctatatt 40837066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 304 - 352
Target Start/End: Complemental strand, 10690732 - 10690684
Alignment:
Q  304 cttttatatttttagcaacaatattcttcttccatcaaattttgagtca 352  Q
    |||||||||||||||||||||| |||| | |||||||||||||||||||    
T  10690732 cttttatatttttagcaacaatcttctccctccatcaaattttgagtca 10690684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 30 - 89
Target Start/End: Complemental strand, 11757246 - 11757189
Alignment:
Q  30 cccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    ||||||||||||||||||||||||||||  ||||||||   |||||||||||||||||||    
T  11757246 cccttgtttcagccccctctatctctct--caaagtttagcctgatacaaggtctatatt 11757189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 30 - 89
Target Start/End: Complemental strand, 20299476 - 20299419
Alignment:
Q  30 cccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    ||||||||||||||||||||||||||||  ||||||||   |||||||||||||||||||    
T  20299476 cccttgtttcagccccctctatctctct--caaagtttagcctgatacaaggtctatatt 20299419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 22392495 - 22392438
Alignment:
Q  26 taaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    ||||||||||||||||||||||||||||      |||||||| |||||||||||||||||||||    
T  22392495 taaacccttgtttcagccccctctatct------caaagtttactctgatacaaggtctatatt 22392438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 1047180 - 1047223
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctc 58  Q
    |||||| ||||||||||| |||||||||||||||||||||||||    
T  1047180 tgttgcttttctaaacccctgtttcagccccctctatctctctc 1047223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 235 - 282
Target Start/End: Original strand, 12484976 - 12485023
Alignment:
Q  235 tcatacgatacaaaaatatatttattgtccataaatatattttcagca 282  Q
    |||||||||||||||||||||||  | |||||||||||||||||||||    
T  12484976 tcatacgatacaaaaatatatttgctatccataaatatattttcagca 12485023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 235 - 282
Target Start/End: Original strand, 12506407 - 12506454
Alignment:
Q  235 tcatacgatacaaaaatatatttattgtccataaatatattttcagca 282  Q
    |||||||||||||||||||||||  | |||||||||||||||||||||    
T  12506407 tcatacgatacaaaaatatatttgctatccataaatatattttcagca 12506454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 22828889 - 22828928
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  22828889 tgttgcctttctaaactcttgtttcagccccctctatctc 22828928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 25542563 - 25542496
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||| |||||||||||| ||||||||||||| ||||||||      |||||||||||||||||||||||||||||    
T  25542563 tgttacctttctaaacctttgtttcagcccc-tctatctc------aaagtttgctctgatacaaggtctatatt 25542496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 38396349 - 38396306
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctc 58  Q
    ||||||||||||||||||||||||||||||||||  ||||||||    
T  38396349 tgttgcctttctaaacccttgtttcagccccctccctctctctc 38396306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 44724612 - 44724573
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  44724612 tgttgcctttctaaacccttgtttcagccccctatatctc 44724573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 308 - 354
Target Start/End: Original strand, 43254023 - 43254069
Alignment:
Q  308 tatatttttagcaacaatattcttcttccatcaaattttgagtcata 354  Q
    ||||||||||||||||||||||| | |||||||||||||||| ||||    
T  43254023 tatatttttagcaacaatattctccatccatcaaattttgagacata 43254069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 187 - 268
Target Start/End: Complemental strand, 10690854 - 10690773
Alignment:
Q  187 aaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataa 268  Q
    |||| ||| |||||||| ||| ||||||||||||||||||||  ||  ||| | | |||||||||||||||||||| |||||    
T  10690854 aaaatataaaatattccttttaaaaatatatttgcatcaaatattctgtcacatggtacaaaaatatatttattgtacataa 10690773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 9679076 - 9679019
Alignment:
Q  31 ccttgtttcagccccctctatctctctcgcaaagtttgc-tctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||||  |||||||| | ||||||||||| ||||||||    
T  9679076 ccttgtttcagccccctctatctctct--caaagtttacatctgatacaagatctatatt 9679019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 54
Target Start/End: Complemental strand, 24465575 - 24465543
Alignment:
Q  22 tttctaaacccttgtttcagccccctctatctc 54  Q
    |||||||||||||||||||||||||||||||||    
T  24465575 tttctaaacccttgtttcagccccctctatctc 24465543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 46 - 89
Target Start/End: Complemental strand, 1606478 - 1606435
Alignment:
Q  46 ctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||| || ||||||||||| ||||||||||||||||||    
T  1606478 ctctatctctatctcaaagtttgctttgatacaaggtctatatt 1606435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 23 - 54
Target Start/End: Original strand, 4296199 - 4296230
Alignment:
Q  23 ttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||    
T  4296199 ttctaaacccttgtttcagccccctctatctc 4296230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 23 - 54
Target Start/End: Complemental strand, 7188568 - 7188537
Alignment:
Q  23 ttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||    
T  7188568 ttctaaacccttgtttcagccccctctatctc 7188537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 235 - 282
Target Start/End: Original strand, 12657600 - 12657647
Alignment:
Q  235 tcatacgatacaaaaatatatttattgtccataaatatattttcagca 282  Q
    |||||||||||||||||||||||  | ||||| |||||||||||||||    
T  12657600 tcatacgatacaaaaatatatttgctatccatgaatatattttcagca 12657647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 13099732 - 13099771
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||| |||||||||||||||||| |||||||||||||    
T  13099732 tgttgccattctaaacccttgtttcaaccccctctatctc 13099771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 21592399 - 21592438
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    |||||| |||||||||| ||||||||||||||||||||||    
T  21592399 tgttgcatttctaaacctttgtttcagccccctctatctc 21592438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 22251798 - 22251837
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    |||||||||||||||| |||||||||||| ||||||||||    
T  22251798 tgttgcctttctaaactcttgtttcagcctcctctatctc 22251837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 50
Target Start/End: Complemental strand, 24748627 - 24748592
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctcta 50  Q
    ||||| ||||||||||||||||||||||||||||||    
T  24748627 tgttgtctttctaaacccttgtttcagccccctcta 24748592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 37412384 - 37412423
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||| ||||||||||||||||||||||||| ||||||    
T  37412384 tgttgccattctaaacccttgtttcagccccctatatctc 37412423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 42331263 - 42331323
Alignment:
Q  23 ttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||||||||      ||||||||  |||||||||| |||||||||    
T  42331263 ttctaaacccttgtttcagccccctctatct------caaagtttagtctgatacaaagtctatatt 42331323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 151
Target Start/End: Complemental strand, 443542 - 443504
Alignment:
Q  113 tcataaatttggaacgaatatcacactgaagatacgttt 151  Q
    |||||||||||||||||||  ||||||||||||||||||    
T  443542 tcataaatttggaacgaattccacactgaagatacgttt 443504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 43253780 - 43253848
Alignment:
Q  23 ttctaaacccttgtttcagccccct--ctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    ||||||| |||||||||||||| ||  || |||||||| ||||||||   |||||||||||||||||||    
T  43253780 ttctaaaaccttgtttcagccctctttctctctctctctcaaagtttagcctgatacaaggtctatatt 43253848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 185; Significance: 1e-100; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 15 - 360
Target Start/End: Complemental strand, 608813 - 608472
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgc--aaagtttgctctgatacaaggtctatattcaccgccaatgagatggacatca 112  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |  |||||||||| ||||| |||||||||||| || |    ||| ||  | | |     
T  608813 tgttgcatttctaaacccttgtttcagccccctctatctctctctctcaaagtttgctatgatataaggtctatatttacag----tgaaat--ataac- 608721  T
Q  113 tcataaatttggaacgaatatcacactgaagatacgtt-tcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaa 211  Q
    ||||||||||||||| |||||||||| ||||||||||| |         |||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  608720 tcataaatttggaacaaatatcacaccgaagatacgttcttttttttttctccttcagtgaaagaatatttgcataaaatatataatattctctttcaaa 608621  T
Q  212 atatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttata 311  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       |||||||||    
T  608620 atatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttata 608521  T
Q  312 tttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  608520 tttttagcaacaatattcttcttccatcaaattttgagtgatactacaa 608472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 15 - 360
Target Start/End: Complemental strand, 43530207 - 43529873
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatattcaccgccaatgagatggacatcatc 114  Q
    |||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| |  |  || |      | | | ||    
T  43530207 tgttgcttttctaaacccttgtttcagccccctctatctctctc--aaagtttgctctgatacaaggtctatatttatagtaaaagt-----ataac-tc 43530116  T
Q  115 ataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaata 214  Q
    ||||||||||||  |||| |||||||||||||| |||         ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  43530115 ataaatttggaataaataccacactgaagatactttt---ttttttctccttcagtgaaagaatattagcataaaaaatataatattccctttcaaaata 43530019  T
Q  215 tatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatattt 314  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||    
T  43530018 tatttgcatcaaatcgttcttcatacaatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattt 43529919  T
Q  315 ttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    |||||||||||||||| | |||||||||||||||||||||||||||    
T  43529918 ttagcaacaatattctccatccatcaaattttgagtcatactacaa 43529873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 15 - 360
Target Start/End: Original strand, 28283475 - 28283811
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatattcaccgccaatgagatggacatcatc 114  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||||||   ||||||||||||||||||| |  |  || |      | | | ||    
T  28283475 tgttgccattctaaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagt-----ataac-tc 28283568  T
Q  115 ataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaata 214  Q
    ||||||||||||| ||||| |||||||||||||||||         |||||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  28283569 ataaatttggaacaaatattacactgaagatacgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattcactttcaaaata 28283665  T
Q  215 tatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatattt 314  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||    
T  28283666 tatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattt 28283765  T
Q  315 ttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    ||||||| |||||||| | |||||||||||||||||||||||||||    
T  28283766 ttagcaaaaatattctccatccatcaaattttgagtcatactacaa 28283811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 15 - 357
Target Start/End: Complemental strand, 15809298 - 15808967
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatattcaccgccaatgagatggacatcatc 114  Q
    ||||||||||||||||||||||||||||||||| ||||||||||  |||||||   ||||||||||||||||||| |  |  || |      | | | ||    
T  15809298 tgttgcctttctaaacccttgtttcagccccctttatctctctc--aaagtttagcctgatacaaggtctatatttatagtaaaagt-----ataac-tc 15809207  T
Q  115 ataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaata 214  Q
    ||||||||||||| |||| ||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  15809206 ataaatttggaacaaataccacactgaagatacgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaata 15809110  T
Q  215 tatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatattt 314  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||       ||||||||||||    
T  15809109 tatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcaacacaaaatatatttgaaacaaatcttttatattt 15809010  T
Q  315 ttagcaacaatattcttcttccatcaaattttgagtcatacta 357  Q
    |||||||||||||||| | ||||||||||||||||||||||||    
T  15809009 ttagcaacaatattctccatccatcaaattttgagtcatacta 15808967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 113 - 386
Target Start/End: Complemental strand, 41384738 - 41384469
Alignment:
Q  113 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 212  Q
    |||||||||||||||||||| ||||||||||||||||||          ||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  41384738 tcataaatttggaacgaataccacactgaagatacgtttttttttt---tccttcaatgaaagaatatttgcataaaaa-tataatattccctttcaaaa 41384643  T
Q  213 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 312  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||| || |       ||||||||||    
T  41384642 tatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagtataaaatatattcgaaacaaatcttttatat 41384543  T
Q  313 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattag 386  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||| |||||| |||||||||| |||||||    
T  41384542 ttttagcaacaatattctccatccatcaaattttgagtcatactacaacattctccaccttgactctaaattag 41384469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 161 - 360
Target Start/End: Complemental strand, 3873952 - 3873752
Alignment:
Q  161 ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcg-tccttcatacgatacaaaaatatatttat 259  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  3873952 ctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgcatcaaatcgtttcttcatacgatacaaaaatatatttat 3873853  T
Q  260 tgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactaca 359  Q
    ||||||||||||||||||||||||||||||| ||||       |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  3873852 tgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactaca 3873753  T
Q  360 a 360  Q
    |    
T  3873752 a 3873752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 113 - 360
Target Start/End: Complemental strand, 41382666 - 41382421
Alignment:
Q  113 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 212  Q
    |||||||||||||||||||| ||||||||||||||||||         ||| ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  41382666 tcataaatttggaacgaataccacactgaagatacgttt--tttttttctcattcagtgaaagaatatttgcataaaaaatataatatttcctttcaaaa 41382569  T
Q  213 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 312  Q
    |||||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||| | ||||||| || |       ||||||||||    
T  41382568 tatatttgcatcaaatcgttgttcatacggtacaaaaatatatttattgtccataaatatattttcagtataaaatatattcgaaacaaatcttttatat 41382469  T
Q  313 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    ||||| |||||||||||| | |||||||||||||||||||||||||||    
T  41382468 ttttaacaacaatattctccatccatcaaattttgagtcatactacaa 41382421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 204 - 360
Target Start/End: Complemental strand, 32339252 - 32339096
Alignment:
Q  204 ctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnnt 303  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       |    
T  32339252 ctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaat 32339153  T
Q  304 cttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  32339152 cttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaa 32339096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 245 - 360
Target Start/End: Original strand, 3265635 - 3265750
Alignment:
Q  245 caaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaatt 344  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||||       |||||||||||||||||||||||||||| | |||||||||||    
T  3265635 caaacatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatt 3265734  T
Q  345 ttgagtcatactacaa 360  Q
    ||||||||||||||||    
T  3265735 ttgagtcatactacaa 3265750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 24873437 - 24873511
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||   |||||||||||||||||||    
T  24873437 tgttgcctttctaaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaaggtctatatt 24873511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 113 - 211
Target Start/End: Complemental strand, 181530 - 181434
Alignment:
Q  113 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaa 211  Q
    |||||||||||||||||||| ||||||||||||||||||         |||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  181530 tcataaatttggaacgaataccacactgaagatacgttt--ttttcttctcctttagtgaaagaatatttgcatcaaaaatataatattccctttcaaa 181434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 12517280 - 12517349
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatat 88  Q
    |||||||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||| |||||    
T  12517280 tgttgcctttctaaacccttgtttcagccccctctatctct----caaagtttgctctgatacaaggtatatat 12517349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 14807830 - 14807762
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||||    
T  14807830 tgttgcctttctaaacccttgtttcagccccctctatct------caaagtttgctctgatacaaggtctatatt 14807762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 32339388 - 32339316
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||||||   |||||||||||||||||||    
T  32339388 tgttgcctttctaaacccttgtttcagccccctctatctctct--caaagtttagcctgatacaaggtctatatt 32339316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 22684912 - 22684990
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctcta----tctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    ||||| ||||||||||||||||||||||| ||||||    |||||||| ||||||||||||||||||||||||||||||    
T  22684912 tgttgtctttctaaacccttgtttcagcctcctctatctctctctctctcaaagtttgctctgatacaaggtctatatt 22684990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 3886174 - 3886242
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||||||||||||||||      |||||||||||||||||||| |||||||||    
T  3886174 tgttgcctttctaaacccttgtttcagccccctctatct------caaagtttgctctgatacaaagtctatatt 3886242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 196 - 282
Target Start/End: Original strand, 11701364 - 11701447
Alignment:
Q  196 aatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 282  Q
    |||||||||||| ||||||||||| |||||| || |||   ||||| |||||||||||||||| || ||||||||||||||||||||    
T  11701364 aatattccctttaaaaatatatttacatcaattcttcc---atacggtacaaaaatatatttactgaccataaatatattttcagca 11701447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 4424097 - 4424029
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    ||||||||||||||| |||||||||||||||||||||||      ||||||||||||||||||||||||| ||||    
T  4424097 tgttgcctttctaaatccttgtttcagccccctctatct------caaagtttgctctgatacaaggtctgtatt 4424029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 15072789 - 15072721
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||||||||||||||||      ||||||||  ||||||||||||||||||||    
T  15072789 tgttgcctttctaaacccttgtttcagccccctctatct------caaagtttagtctgatacaaggtctatatt 15072721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 18810787 - 18810719
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||||||||||||||||      | ||||||||||||||||||| ||||||||    
T  18810787 tgttgcctttctaaacccttgtttcagccccctctatct------ccaagtttgctctgatacaagatctatatt 18810719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 27827065 - 27826997
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||||||||||||||||      | |||||||||||||||||||| |||||||    
T  27827065 tgttgcctttctaaacccttgtttcagccccctctatct------ccaagtttgctctgatacaaggcctatatt 27826997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 27829376 - 27829308
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||||||||||||||||      | |||||||||||||||||||| |||||||    
T  27829376 tgttgcctttctaaacccttgtttcagccccctctatct------ccaagtttgctctgatacaaggcctatatt 27829308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 44720922 - 44720854
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||||||||||||||||      ||||||||||| ||||| ||||||||||||    
T  44720922 tgttgcctttctaaacccttgtttcagccccctctatct------caaagtttgctttgatataaggtctatatt 44720854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 35872627 - 35872673
Alignment:
Q  8 ccctagctgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||    
T  35872627 ccctagttgttgcctttctaaacccttgtttcagccccctctatctc 35872673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 3874089 - 3874017
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    ||||| |||||||||||||||||||||||||| ||||||||||  ||||||||   ||||||||| |||||||||    
T  3874089 tgttgtctttctaaacccttgtttcagcccccgctatctctct--caaagtttagcctgatacaaagtctatatt 3874017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 5622994 - 5623033
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  5622994 tgttgcctttctaaacccttgtttcagccccctctatctc 5623033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 208 - 279
Target Start/End: Original strand, 13986214 - 13986285
Alignment:
Q  208 caaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttca 279  Q
    |||||||||||||||||||||| || ||||| || ||||||||| |||| | | ||||||||||||||||||    
T  13986214 caaaatatatttgcatcaaatcttctttcatgcggtacaaaaatttattaactatccataaatatattttca 13986285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 14419447 - 14419486
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  14419447 tgttgcctttctaaacccttgtttcagccccctctatctc 14419486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 18812972 - 18812904
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    ||||||||||||||||||||||||||||| |||||||||      | ||||||||||||||||||| ||||||||    
T  18812972 tgttgcctttctaaacccttgtttcagcctcctctatct------ccaagtttgctctgatacaagatctatatt 18812904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 25952600 - 25952561
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  25952600 tgttgcctttctaaacccttgtttcagccccctctatctc 25952561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 26775280 - 26775241
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  26775280 tgttgcctttctaaacccttgtttcagccccctctatctc 26775241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 27107153 - 27107192
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  27107153 tgttgcctttctaaacccttgtttcagccccctctatctc 27107192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 33541644 - 33541683
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  33541644 tgttgcctttctaaacccttgtttcagccccctctatctc 33541683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 37214466 - 37214505
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  37214466 tgttgcctttctaaacccttgtttcagccccctctatctc 37214505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 43082052 - 43082009
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctc 58  Q
    |||||| |||||||||||||||||||||||||||||||||||||    
T  43082052 tgttgcttttctaaacccttgtttcagccccctctatctctctc 43082009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 36865617 - 36865579
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatct 53  Q
    |||||||||||||||||||||||||||||||||||||||    
T  36865617 tgttgcctttctaaacccttgtttcagccccctctatct 36865579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 1225245 - 1225206
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  1225245 tgttgtctttctaaacccttgtttcagccccctctatctc 1225206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 13858740 - 13858779
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  13858740 tgttgcctttctaaacccttgtttcatccccctctatctc 13858779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 14477355 - 14477316
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  14477355 tgttgcctttctaaacccttgtttcaaccccctctatctc 14477316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 15068060 - 15068021
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  15068060 tgttgcctttctaaacccttgtttcagccccttctatctc 15068021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 306 - 352
Target Start/End: Original strand, 13986328 - 13986374
Alignment:
Q  306 tttatatttttagcaacaatattcttcttccatcaaattttgagtca 352  Q
    |||||||||||||||||||| |||||| ||||| |||||||||||||    
T  13986328 tttatatttttagcaacaatcttcttcatccataaaattttgagtca 13986374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 352
Target Start/End: Original strand, 11701435 - 11701479
Alignment:
Q  308 tatatttttagcaacaatattcttcttccatcaaattttgagtca 352  Q
    |||||||| ||||||||| |||||| |||||||||||||||||||    
T  11701435 tatattttcagcaacaatcttcttcgtccatcaaattttgagtca 11701479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 181616 - 181548
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    ||||||| |||||| ||||||||||||||||||||||||      ||||||||  |||||||||| |||||||||    
T  181616 tgttgccattctaagcccttgtttcagccccctctatct------caaagtttagtctgatacaaagtctatatt 181548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 5372434 - 5372472
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  5372434 tgttgcctttctaaacccttgtttcag-cccctctatctc 5372472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 23 - 54
Target Start/End: Complemental strand, 27911086 - 27911055
Alignment:
Q  23 ttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||    
T  27911086 ttctaaacccttgtttcagccccctctatctc 27911055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 23 - 54
Target Start/End: Complemental strand, 27957505 - 27957474
Alignment:
Q  23 ttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||    
T  27957505 ttctaaacccttgtttcagccccctctatctc 27957474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 30480759 - 30480798
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    |||||||||||||||||||||||||| |||| ||||||||    
T  30480759 tgttgcctttctaaacccttgtttcaaccccttctatctc 30480798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 43079681 - 43079639
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctc 58  Q
    |||||| ||||||||||||||||||||||||| |||||||||||    
T  43079681 tgttgcttttctaaacccttgtttcagccccc-ctatctctctc 43079639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 151
Target Start/End: Complemental strand, 32339298 - 32339260
Alignment:
Q  113 tcataaatttggaacgaatatcacactgaagatacgttt 151  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  32339298 tcataaatttggaacaaataccacactgaagatacgttt 32339260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 352
Target Start/End: Original strand, 30679208 - 30679256
Alignment:
Q  303 tcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 352  Q
    |||||| |||||||| ||||| |||||||| |||||||||||||||||||    
T  30679208 tcttttttatttttaccaaca-tattcttcatccatcaaattttgagtca 30679256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 54
Target Start/End: Complemental strand, 21480586 - 21480554
Alignment:
Q  22 tttctaaacccttgtttcagccccctctatctc 54  Q
    |||||||||||||||||||||||| ||||||||    
T  21480586 tttctaaacccttgtttcagccccatctatctc 21480554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 185; Significance: 1e-100; HSPs: 81)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 113 - 386
Target Start/End: Original strand, 31735869 - 31736139
Alignment:
Q  113 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 212  Q
    ||||||||||||||| |||| ||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  31735869 tcataaatttggaacaaataccacactgaagatacgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 31735965  T
Q  213 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 312  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||    
T  31735966 tatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatat 31736065  T
Q  313 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattag 386  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||| |||||||    
T  31736066 ttttagcaacaatattctccttccatcaaattttgagtcatactacaacattctccaccttgactctaaattag 31736139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 15 - 360
Target Start/End: Complemental strand, 47906293 - 47905958
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatattcaccgccaatgagatggacatcatc 114  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||||||   ||||||||||||||||||| |  |  || |      | | | ||    
T  47906293 tgttgccattctaaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagt-----ataac-tc 47906200  T
Q  115 ataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaata 214  Q
    ||||||||||||| |||| |||||||||||||| |||         |||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  47906199 ataaatttggaacaaataccacactgaagatactttt----tttttctccttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaata 47906104  T
Q  215 tatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatattt 314  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||    
T  47906103 tatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattt 47906004  T
Q  315 ttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    |||||||||||||||| | |||||||||||||||||||||||||||    
T  47906003 ttagcaacaatattctccatccatcaaattttgagtcatactacaa 47905958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 15 - 360
Target Start/End: Original strand, 15295092 - 15295437
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgc--------aaagtttgctctgatacaaggtctatattcaccgccaatgagatgg 106  Q
    |||||||||||||||||||||||||||||| ||||||||||||| |        ||||||||||||||||||||||||||||| |  |  ||            
T  15295092 tgttgcctttctaaacccttgtttcagccctctctatctctctctctctctctcaaagtttgctctgatacaaggtctatatttatagtaaac------- 15295184  T
Q  107 acatca-tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccct 205  Q
    | || | ||||||||| |||||||||| |||||||||||||| |||         |||||||||||||||||||||||||| ||||||||||||||| ||    
T  15295185 atataactcataaattaggaacgaataccacactgaagatacattt--tttttttctccttcagtgaaagaatatttgcatcaaaaatataatattcgct 15295282  T
Q  206 ttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntct 305  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       |||    
T  15295283 ttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatct 15295382  T
Q  306 tttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15295383 tttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 15295437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 15 - 360
Target Start/End: Original strand, 9463502 - 9463838
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatattcaccgccaatgagatggacatcatc 114  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||||||||||||||||||| |  |  || |      | | | ||    
T  9463502 tgttgcctttctaaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagt-----ataac-tc 9463595  T
Q  115 ataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaata 214  Q
    ||||||||||||| |||| |||| |||||||||||||         |||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  9463596 ataaatttggaacaaataccacaatgaagatacgttt---ttttttctccttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaata 9463692  T
Q  215 tatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatattt 314  Q
    ||||||||| |||| || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||    
T  9463693 tatttgcattaaattgttcttcatacgatataaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattt 9463792  T
Q  315 ttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    |||||||||||||||| | |||||||||||||||||||||||||||    
T  9463793 ttagcaacaatattctccatccatcaaattttgagtcatactacaa 9463838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 15 - 360
Target Start/End: Complemental strand, 24325686 - 24325349
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgc--aaagtttgctctgatacaaggtctatattcaccgccaatgagatggacatca 112  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||| |  |  || |      | | |     
T  24325686 tgttgcctttctaa-cccttgtttcagccccctctatctctctctctcaaagtttgctctgatacaaggtctatatttatagtaaaagt-----ataac- 24325594  T
Q  113 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 212  Q
    ||||||||||||||| |||| |||||| ||||||| |||         |||||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  24325593 tcataaatttggaacaaataccacactaaagatacattt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattcactttcaaaa 24325497  T
Q  213 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 312  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||       ||||||||||    
T  24325496 tatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaatatatatttgaaacaaatcttttatat 24325397  T
Q  313 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||    
T  24325396 ttttagcaacaatattctccatccatcaaattttgagtcatactacaa 24325349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 15 - 360
Target Start/End: Complemental strand, 39932096 - 39931764
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatattcaccgccaatgagatggacatca-t 113  Q
    ||||||||||||||||||||||||||||||||||||||||||    |||||||  ||| |||||||||||||||| |  |  ||        | || | |    
T  39932096 tgttgcctttctaaacccttgtttcagccccctctatctctc----aaagttttgtctcatacaaggtctatatttatagtaaac-------atataact 39932008  T
Q  114 cataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaat 213  Q
    |||||||||||||||||||  |||||||||||||||||         |||||||| | ||||||||||||||| |||| |||||||||||||||||||||    
T  39932007 cataaatttggaacgaatactacactgaagatacgttt---ttttttctccttcaataaaagaatatttgcatcaaaagtataatattccctttcaaaat 39931911  T
Q  214 atatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatt 313  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       |||||||||||    
T  39931910 atatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatt 39931811  T
Q  314 tttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||    
T  39931810 tttagcaacaatattctccatccatcaaattttgagtcatactacaa 39931764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 15 - 360
Target Start/End: Original strand, 9459675 - 9460011
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatattcaccgccaatgagatggacatcatc 114  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||||||   ||||||||||||||||||| |  |  || |      | | | ||    
T  9459675 tgttgactttctaaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagt-----ataac-tc 9459768  T
Q  115 ataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaata 214  Q
    ||||||||||||| |||| |||| |||||||||||||         |||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  9459769 ataaatttggaacaaataccacaatgaagatacgttt---ttttttctccttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaata 9459865  T
Q  215 tatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatattt 314  Q
    ||||||||| |||| || ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||    
T  9459866 tatttgcattaaattgttcttcatacggtataaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattt 9459965  T
Q  315 ttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    |||||||||||||||| | |||||||||||||||||||||||||||    
T  9459966 ttagcaacaatattctccatccatcaaattttgagtcatactacaa 9460011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 162 - 386
Target Start/End: Original strand, 27337332 - 27337556
Alignment:
Q  162 tccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattg 261  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  27337332 tccttcagttaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattg 27337431  T
Q  262 tccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaaa 361  Q
    ||||||||||||||||||||||||||||| ||||       |||| ||||||||||||||||||||||  | |||||||||||| ||||||||||||||     
T  27337432 tccataaatatattttcagcacaaaatatatttgaaacaaatcttatatatttttagcaacaatattccccatccatcaaatttggagtcatactacaac 27337531  T
Q  362 attctcaaccttgactccaaattag 386  Q
    |||||| |||||||||| |||||||    
T  27337532 attctccaccttgactctaaattag 27337556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 113 - 360
Target Start/End: Original strand, 17324980 - 17325225
Alignment:
Q  113 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 212  Q
    |||||||||||||||||||||||| ||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  17324980 tcataaatttggaacgaatatcaccctgaagatacgttt--tttttttctccttcagtgaaagaatatttgcataaaaaatataatattcccttgcaaaa 17325077  T
Q  213 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 312  Q
    |||||||||||||||||||  |||||||| ||||||||||||||||||||||||||||||||||||| | |||||||| ||||       ||||||||||    
T  17325078 tatatttgcatcaaatcgtttttcatacggtacaaaaatatatttattgtccataaatatattttcaactcaaaatatatttgaaacaaatcttttatat 17325177  T
Q  313 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||    
T  17325178 ttttagcaacaatattctccatccatcaaattttgagtcatactacaa 17325225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 15 - 330
Target Start/End: Original strand, 21948445 - 21948751
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatattcaccgccaatgagatggacatca-t 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||  | |||||||||||||||||| |  |  ||        | || | |    
T  21948445 tgttgcctttctaaacccttgtttcagccccctctatctctctc--aaagtttagtatgatacaaggtctatatttatagtaaac-------atataact 21948535  T
Q  114 cataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaat 213  Q
    ||||||||||||||||||| ||||||||||||||||||         ||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  21948536 cataaatttggaacgaataccacactgaagatacgttt-tttttttcctccttctgtgaaagaatatttgcatcaaaaatataatattccctttcaaaat 21948634  T
Q  214 atatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatt 313  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       |||||||||||    
T  21948635 atatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatt 21948734  T
Q  314 tttagcaacaatattct 330  Q
    |||||||||||||||||    
T  21948735 tttagcaacaatattct 21948751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 15 - 360
Target Start/End: Original strand, 27339388 - 27339728
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatattcaccgccaatgagatggacatcatc 114  Q
    |||||||||||||| |||||||||||||||||||||||||||||  |||||||   || |||||||||||||||| |  |  || |      | | | ||    
T  27339388 tgttgcctttctaagcccttgtttcagccccctctatctctctc--aaagtttagcctaatacaaggtctatatttatagtaaaagt-----ataac-tc 27339479  T
Q  115 ataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaata 214  Q
    ||||||||||||| |||| ||||||||||||||||| |         ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  27339480 ataaatttggaacaaataccacactgaagatacgtt-cttttttttttccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaata 27339578  T
Q  215 tatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataa----atatattttcagcacaaaatatctttgnnnnnnntcttttat 310  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    |||||||||||||||||||||| ||||       ||||||||    
T  27339579 tatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatatattttcagcacaaaatatatttgaaacaaatcttttat 27339678  T
Q  311 atttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    |||||||||||||||||||| | ||| |||||||| ||||||||||||||    
T  27339679 atttttagcaacaatattctccatccgtcaaatttggagtcatactacaa 27339728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 164 - 360
Target Start/End: Complemental strand, 48665050 - 48664854
Alignment:
Q  164 cttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtc 263  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||    
T  48665050 cttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatgtgcatcaaatcgttcttcatacggtacaaaaatatatttattgtc 48664951  T
Q  264 cataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    ||||||||||||||||||||||||||| ||||       |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  48664950 cataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaa 48664854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 164 - 357
Target Start/End: Original strand, 2949617 - 2949810
Alignment:
Q  164 cttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtc 263  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||    
T  2949617 cttcagtgaaagaatatttgtatcaaaaatataatattccctttcaaaatatatttgcatcaaatcattcttcatacaatacaaaaatatatttattgtc 2949716  T
Q  264 cataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatacta 357  Q
    ||||||||||||||||||||||||||| ||||       |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  2949717 cataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcatccatgaaattttgagtcatacta 2949810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 177 - 360
Target Start/End: Original strand, 6115532 - 6115716
Alignment:
Q  177 atatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattt 276  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  6115532 atatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtcattcatacgatacaaaaatatatttattgtccataaatatattt 6115631  T
Q  277 tcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaa-ttttgagtcatactacaa 360  Q
    |||||||||||||| ||||       |||||||||||||||||||||||||||| | ||||||||| ||||||||||| ||||||    
T  6115632 tcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatttttgagtcatcctacaa 6115716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 161 - 360
Target Start/End: Original strand, 28998643 - 28998842
Alignment:
Q  161 ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttatt 260  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  | |||| |||| ||||||||| ||||||||    
T  28998643 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatatttcttcgtacggtacaaaaatgtatttatt 28998742  T
Q  261 gtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    |||||||||||||||||||||||||||||| |||        ||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||    
T  28998743 gtccataaatatattttcagcacaaaatatattttaaacaaatcttttatagttttagcaacaatattctccatccatcaaattttgagtcatactacaa 28998842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 161 - 360
Target Start/End: Original strand, 29004359 - 29004558
Alignment:
Q  161 ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttatt 260  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  | |||| |||| ||||||||| ||||||||    
T  29004359 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatatttcttcgtacggtacaaaaatgtatttatt 29004458  T
Q  261 gtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    |||||||||||||||||||||||||||||| |||        ||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||    
T  29004459 gtccataaatatattttcagcacaaaatatattttaaacaaatcttttatagttttagcaacaatattctccatccatcaaattttgagtcatactacaa 29004558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 172 - 360
Target Start/End: Original strand, 45693834 - 45694022
Alignment:
Q  172 aaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaata 271  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  45693834 aaagaatatttgcataaaaaatatattattctctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaata 45693933  T
Q  272 tattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    |||||| |||||||||||| ||||       |||||||||||||||||||||||||||| | ||||||||||||||| ||||| |||||    
T  45693934 tatttttagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgaatcatagtacaa 45694022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 170 - 360
Target Start/End: Original strand, 4131690 - 4131880
Alignment:
Q  170 tgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatattta-ttgtccataa 268  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||    
T  4131690 tgaaagaatatttgcatcaaaa-tataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttatttgtccataa 4131788  T
Q  269 atatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    |||||| |||| |||||||||| ||||       |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  4131789 atatatgttcaacacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaa 4131880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 174 - 386
Target Start/End: Complemental strand, 6997395 - 6997190
Alignment:
Q  174 agaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatata 273  Q
    ||||||||||||| ||||||||||||||| |||||||      ||||||||||||||| ||||||||| || ||||||||||||||||||||||| ||||    
T  6997395 agaatatttgcatcaaaaatataatattctctttcaa------tttgcatcaaatcgttcttcatacggtataaaaatatatttattgtccataa-tata 6997303  T
Q  274 ttttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaaaattctcaacctt 373  Q
    |||| |||||||||||| ||||       ||||||||||||||||||| |||||||| | |||||||||||||||||||||||| || |||||| |||||    
T  6997302 tttttagcacaaaatatatttgaaacaaatcttttatatttttagcaataatattctccatccatcaaattttgagtcatactataacattctccacctt 6997203  T
Q  374 gactccaaattag 386  Q
    ||||| |||||||    
T  6997202 gactctaaattag 6997190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 164 - 324
Target Start/End: Complemental strand, 6996221 - 6996067
Alignment:
Q  164 cttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtc 263  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||      ||| ||||||||||| ||||||||| ||||||||||||| |||||||    
T  6996221 cttcagtgaaagaatatttgcaacaaaaatataatattccctttcaa------tttacatcaaatcgttcttcatacggtacaaaaatatatgtattgtc 6996128  T
Q  264 cataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaa 324  Q
    ||||||||||||||||||||||||||| ||||       ||||||||||||||||||||||    
T  6996127 cataaatatattttcagcacaaaatatatttgaaacaagtcttttatatttttagcaacaa 6996067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 113 - 250
Target Start/End: Original strand, 46432072 - 46432207
Alignment:
Q  113 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 212  Q
    ||||||||||||||| |||| |||| |||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  46432072 tcataaatttggaacaaataccacagtgaagatacgttt--tttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 46432169  T
Q  213 tatatttgcatcaaatcgtccttcatacgatacaaaaa 250  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  46432170 tatatttgcatcaaatcgttcttcatacgatacaaaaa 46432207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 247 - 360
Target Start/End: Original strand, 46432521 - 46432634
Alignment:
Q  247 aaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaatttt 346  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||       |||||||||||||||||||||||||||| | |||||||||||||    
T  46432521 aaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatttt 46432620  T
Q  347 gagtcatactacaa 360  Q
    ||||||||||||||    
T  46432621 gagtcatactacaa 46432634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 209 - 360
Target Start/End: Complemental strand, 16561284 - 16561133
Alignment:
Q  209 aaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntctttt 308  Q
    ||||||||||||  ||||||  ||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||| ||||       | ||||    
T  16561284 aaaatatatttgtttcaaatattccttcatacggtacaaaaagatatttattgtcaataaatatattttcagcacaaaatatatttgaaacaaatatttt 16561185  T
Q  309 atatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    |||||||||||||||||||||||| |||| |||||||||| |||||| ||||    
T  16561184 atatttttagcaacaatattcttcatccaacaaattttgaatcatacaacaa 16561133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 196 - 282
Target Start/End: Original strand, 11693580 - 11693666
Alignment:
Q  196 aatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 282  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  11693580 aatattccctttaaaaatatatttgcatcaaatcttccttcatacggtacaaaaatatatttattgtccataaatatattttcagca 11693666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 16 - 240
Target Start/End: Original strand, 2510583 - 2510801
Alignment:
Q  16 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatattcaccgccaatgagatggacatcatca 115  Q
    ||||||||| |||||||||||||||||||||||||||||||||  |||||||   ||||||||||||||||||| |  |  || |      | | | |||    
T  2510583 gttgcctttataaacccttgtttcagccccctctatctctctc--aaagtttagcctgatacaaggtctatatttatagtaaaagt-----ataac-tca 2510674  T
Q  116 taaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnc--tccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaat 213  Q
    |||||||||||| |||| ||||||||| ||||||||         |  ||||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  2510675 taaatttggaacaaataccacactgaaaatacgttttttttctttccctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaat 2510774  T
Q  214 atatttgcatcaaatcgtccttcatac 240  Q
    |||||||||||||||||| ||||||||    
T  2510775 atatttgcatcaaatcgttcttcatac 2510801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 196 - 282
Target Start/End: Original strand, 13785662 - 13785748
Alignment:
Q  196 aatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 282  Q
    |||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||||| | || ||||||||||||||||||    
T  13785662 aatattccttttaaaaatatatttgcatcaaatcttccttcatacgatacaaaaatatatttactatctataaatatattttcagca 13785748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 115 - 228
Target Start/End: Original strand, 26520463 - 26520580
Alignment:
Q  115 ataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnn----ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaa 210  Q
    ||||||||||||||||||||||||||||||||| ||||            || |||| |||||||||||||||||| |||||||||||||||||||||||    
T  26520463 ataaatttggaacgaatatcacactgaagatacatttcttttgtttttttcttcttcggtgaaagaatatttgcatcaaaaatataatattccctttcaa 26520562  T
Q  211 aatatatttgcatcaaat 228  Q
    ||||||||||||||||||    
T  26520563 aatatatttgcatcaaat 26520580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 196 - 279
Target Start/End: Complemental strand, 14352842 - 14352759
Alignment:
Q  196 aatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttca 279  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||| | | ||||||||||||||||    
T  14352842 aatattccctttaaaaatatatttgcatcaaatcttccttcatacggtacaaaaatatatttactattcataaatatattttca 14352759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 47177385 - 47177313
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||| ||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||    
T  47177385 tgttgcttttctaaacccttgtttcagccccctctatctctct--caaagtttgctttgatacaaggtctatatt 47177313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 47179736 - 47179664
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||| ||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||    
T  47179736 tgttgcttttctaaacccttgtttcagccccctctatctctct--caaagtttgctttgatacaaggtctatatt 47179664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 161 - 223
Target Start/End: Original strand, 6115479 - 6115541
Alignment:
Q  161 ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcat 223  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  6115479 ctccttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcat 6115541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 28842518 - 28842448
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||| ||||||    
T  28842518 tgttgcctttctaaacccttgtttcagccccctctatctct----caaagtttgctctgatacaaggtttatatt 28842448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 20302482 - 20302414
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||||    
T  20302482 tgttgcctttctaaacccttgtttcagccccctctatct------caaagtttgctctgatacaaggtctatatt 20302414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 6823038 - 6822971
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatat 88  Q
    |||||||||||||||||||||||||||||||||||||||      |||||||||||||||||||||||||||||    
T  6823038 tgttgcctttctaaacccttgtttcagccccctctatct------caaagtttgctctgatacaaggtctatat 6822971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 27337196 - 27337268
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||||||   || ||||||||||||||||    
T  27337196 tgttgcctttctaaacccttgtttcagccccctctatctctct--caaagtttagcctaatacaaggtctatatt 27337268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 51750062 - 51749994
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||||||||||||||||      | ||||||||||||||||||||||||||||    
T  51750062 tgttgcctttctaaacccttgtttcagccccctctatct------ccaagtttgctctgatacaaggtctatatt 51749994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 6823908 - 6823840
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatat 88  Q
    ||||||||||||||||||||||||||||||||     |||| || |||||||||||||||||||||||||||||    
T  6823908 tgttgcctttctaaacccttgtttcagccccc-----ctctatctcaaagtttgctctgatacaaggtctatat 6823840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 28840703 - 28840633
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||| ||||||||||||||||||||| |||||| ||||||||    |||||||||||||||||||||||||||||    
T  28840703 tgtttcctttctaaacccttgtttcatccccctgtatctctc----aaagtttgctctgatacaaggtctatatt 28840633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 196 - 279
Target Start/End: Complemental strand, 10115653 - 10115572
Alignment:
Q  196 aatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttca 279  Q
    |||||||| ||| ||||||||||||||||||||  |||||||||||  | ||||  ||||||||||||||||||||||||||||    
T  10115653 aatattccgtttaaaaatatatttgcatcaaatattccttcatacgggataaaa--atatttattgtccataaatatattttca 10115572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 12302763 - 12302836
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgc-tctgatacaaggtctatatt 89  Q
    |||||| ||||||||||||||||||||||||||||||||||||  ||| |||| | ||||||||||||||||||||    
T  12302763 tgttgcatttctaaacccttgtttcagccccctctatctctct--caaggtttacatctgatacaaggtctatatt 12302836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 2617539 - 2617471
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    ||||| ||||||||||||||||||||||| |||||||||      ||||||||||||||||||||||||||||||    
T  2617539 tgttgtctttctaaacccttgtttcagcctcctctatct------caaagtttgctctgatacaaggtctatatt 2617471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 13215104 - 13215036
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||||||||||||||||      |||| ||| |||||||||||||||||||||    
T  13215104 tgttgcctttctaaacccttgtttcagccccctctatct------caaaatttactctgatacaaggtctatatt 13215036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 13761860 - 13761792
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||||||| ||||||||      | ||||||||||||||||||||||||||||    
T  13761860 tgttgcctttctaaacccttgtttcagccctctctatct------ccaagtttgctctgatacaaggtctatatt 13761792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 25127895 - 25127820
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgc-tctgatacaaggtctatatt 89  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||| |||| | ||| ||||||||| ||||||    
T  25127895 tgttgcctttctaaacccttgtttcaggcccctctatctctctctcaaggtttacatctaatacaaggtttatatt 25127820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 41646943 - 41646875
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||| ||||||||||||||||||      |||||||| |||||||||||||||||||||    
T  41646943 tgttgcctttctaaacccttatttcagccccctctatct------caaagtttactctgatacaaggtctatatt 41646875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 232 - 282
Target Start/End: Complemental strand, 32260883 - 32260833
Alignment:
Q  232 ccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 282  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  32260883 ccttcatacggtacaaaaatatatttattgttcataaatatattttcagca 32260833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 303 - 352
Target Start/End: Complemental strand, 32260795 - 32260746
Alignment:
Q  303 tcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 352  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  32260795 tcttttatatttttagcaacaatcttcttcatccatcaaattttgagtca 32260746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 10400094 - 10400154
Alignment:
Q  23 ttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||||||||| |      |||||||||||||||||||||||||||    
T  10400094 ttctaaacccttgtttcagccccctctatctccc------agtttgctctgatacaaggtctatatt 10400154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 15823569 - 15823501
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    ||||||||||||||||||||||||||||||||| |||||||      |||||| || ||||||||||||||||||    
T  15823569 tgttgcctttctaaacccttgtttcagccccctttatctct------aagtttactttgatacaaggtctatatt 15823501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 16231624 - 16231556
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||| |||||| |||||||||||||||||||||||||      ||||||||||| ||||||||||||||||||    
T  16231624 tgttgcttttctagacccttgtttcagccccctctatct------caaagtttgctttgatacaaggtctatatt 16231556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 17318916 - 17318877
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  17318916 tgttgcctttctaaacccttgtttcagccccctctatctc 17318877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 18307132 - 18307093
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  18307132 tgttgcctttctaaacccttgtttcagccccctctatctc 18307093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 25248772 - 25248811
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  25248772 tgttgcctttctaaacccttgtttcagccccctctatctc 25248811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 28207324 - 28207392
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    ||||| |||||||||||||||||||||||||||||||||      ||||||||  ||||||||||||||||||||    
T  28207324 tgttgtctttctaaacccttgtttcagccccctctatct------caaagtttagtctgatacaaggtctatatt 28207392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 31423132 - 31423171
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  31423132 tgttgcctttctaaacccttgtttcagccccctctatctc 31423171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 31735779 - 31735851
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||| |||||||||||||||  |  ||||||||   |||||||||||||||||||    
T  31735779 tgttgcctttctaaacccttgttttagccccctctatctcatt--caaagtttagcctgatacaaggtctatatt 31735851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 38925736 - 38925804
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||| ||| ||||||||||||||||||||||      |||||||| |||||||||||||||||||||    
T  38925736 tgttgcctttctgaactcttgtttcagccccctctatct------caaagtttactctgatacaaggtctatatt 38925804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 51752388 - 51752320
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||| ||||||||||| ||||||||||||||||||||||      | ||||||||||||||||||||||||||||    
T  51752388 tgttacctttctaaactcttgtttcagccccctctatct------ccaagtttgctctgatacaaggtctatatt 51752320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 13112047 - 13112093
Alignment:
Q  243 tacaaaaatatatttattgtccataaatatattttcagcacaaaata 289  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||    
T  13112047 tacaaaaatatatttattgtccatgaatatattttcagcataaaata 13112093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 16428676 - 16428638
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatct 53  Q
    |||||||||||||||||||||||||||||||||||||||    
T  16428676 tgttgcctttctaaacccttgtttcagccccctctatct 16428638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 17186386 - 17186425
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  17186386 tgttgcctttctaaacccttatttcagccccctctatctc 17186425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 18839610 - 18839571
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  18839610 tgttgcctatctaaacccttgtttcagccccctctatctc 18839571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 20291480 - 20291412
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||| | ||||||||||      |||| |||||||| ||||||||||||||||    
T  20291480 tgttgcctttctaaacccttgtttcatctccctctatct------caaaatttgctctaatacaaggtctatatt 20291412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 31425277 - 31425316
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  31425277 tgttgcctttctaaacccttgtttcagccccctttatctc 31425316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 48665200 - 48665126
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||| |||||||   |||| ||  || |||| ||||||| |||||||||||||    
T  48665200 tgttgcctttctaaacccttgtttcaaccccctccccctctatcttaaggtttactctgattcaaggtctatatt 48665126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 56
Target Start/End: Original strand, 4131637 - 4131678
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctc 56  Q
    ||||||| ||||||| ||||||||||||||||||||||||||    
T  4131637 tgttgccattctaaatccttgtttcagccccctctatctctc 4131678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 54
Target Start/End: Original strand, 50079085 - 50079118
Alignment:
Q  21 ctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||||    
T  50079085 ctttctaaacccttgtttcagccccctctatctc 50079118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 54
Target Start/End: Original strand, 6115344 - 6115376
Alignment:
Q  22 tttctaaacccttgtttcagccccctctatctc 54  Q
    |||||||||||||||||||||||||||||||||    
T  6115344 tttctaaacccttgtttcagccccctctatctc 6115376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 46431965 - 46432009
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccc-tctatctctctc 58  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||    
T  46431965 tgttgcctttctaaacccttgtttcagcccccatctctctctctc 46432009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 23 - 54
Target Start/End: Original strand, 2949497 - 2949528
Alignment:
Q  23 ttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||    
T  2949497 ttctaaacccttgtttcagccccctctatctc 2949528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 6995958 - 6995997
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||| ||||||| ||||||||||||||    
T  6995958 tgttgcctttctaaaccgttgtttcggccccctctatctc 6995997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 11457733 - 11457772
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||| ||||||||||| ||||||||||||||||||||||    
T  11457733 tgttgtctttctaaaccattgtttcagccccctctatctc 11457772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 305 - 352
Target Start/End: Original strand, 11693706 - 11693753
Alignment:
Q  305 ttttatatttttagcaacaatattcttcttccatcaaattttgagtca 352  Q
    ||||||| ||||||||| ||| |||||| |||||||||||||||||||    
T  11693706 ttttataattttagcaataatcttcttcatccatcaaattttgagtca 11693753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 25251533 - 25251572
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||| ||||||||||| ||||||||||||||||||||||    
T  25251533 tgttgtctttctaaacctttgtttcagccccctctatctc 25251572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 31489938 - 31489899
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    |||| ||||||||||||||||||||| |||||||||||||    
T  31489938 tgttacctttctaaacccttgtttcaaccccctctatctc 31489899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 26613503 - 26613566
Alignment:
Q  23 ttctaaacccttgttt-cagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||| ||||||||||||||||||    || ||||  ||||||||||||||||||||    
T  26613503 ttctaaacccttgttttcagccccctctatctctc----aaggtttcatctgatacaaggtctatatt 26613566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 352
Target Start/End: Original strand, 13785786 - 13785835
Alignment:
Q  303 tcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 352  Q
    ||||| ||||||||||| |||||||||| | |||||||| ||||||||||    
T  13785786 tctttcatatttttagcgacaatattctccatccatcaatttttgagtca 13785835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 6756550 - 6756514
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctat 51  Q
    |||||||||||||| |||||||||||| |||||||||    
T  6756550 tgttgcctttctaagcccttgtttcagtcccctctat 6756514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 352
Target Start/End: Complemental strand, 10115506 - 10115466
Alignment:
Q  312 tttttagcaacaatattcttcttccatcaaattttgagtca 352  Q
    ||||| ||||||||||||||  |||||||||||||||||||    
T  10115506 ttttttgcaacaatattcttaatccatcaaattttgagtca 10115466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 47
Target Start/End: Complemental strand, 16432428 - 16432396
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccct 47  Q
    ||||||||||||||||||||||||| |||||||    
T  16432428 tgttgcctttctaaacccttgtttctgccccct 16432396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 54
Target Start/End: Original strand, 49495468 - 49495496
Alignment:
Q  26 taaacccttgtttcagccccctctatctc 54  Q
    |||||||||||||||||||||||||||||    
T  49495468 taaacccttgtttcagccccctctatctc 49495496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 181; Significance: 1e-97; HSPs: 82)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 15 - 360
Target Start/End: Complemental strand, 746760 - 746424
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatattcaccgccaatgagatggacatcatc 114  Q
    |||||| ||||||||||||||||||||||||||||||||||||| ||||||||   ||||||||||||||||||| |  |  || |      | | | ||    
T  746760 tgttgcttttctaaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagt-----ataac-tc 746667  T
Q  115 ataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaata 214  Q
    ||||||||||||| |||| ||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  746666 ataaatttggaacaaataccacactgaagatacgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaata 746570  T
Q  215 tatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatattt 314  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||    
T  746569 tatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattt 746470  T
Q  315 ttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    |||||||||||||||| | |||||||||||||||||||||||||||    
T  746469 ttagcaacaatattctccatccatcaaattttgagtcatactacaa 746424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 15 - 386
Target Start/End: Complemental strand, 458287 - 457926
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatattcaccgccaatgagatggacatcatc 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||  || ||||   ||||||||||||||||||| |  |  || |      | | | ||    
T  458287 tgttgcctttctaaacccttgtttcagccccctctatctctctc--aaggtttagcctgatacaaggtctatatttatagtaaaagt-----ataac-tc 458196  T
Q  115 ataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaata 214  Q
    ||||||||||||| |||| ||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  458195 ataaatttggaacaaataccacactgaagatacgttt--tttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaata 458098  T
Q  215 tatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatattt 314  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||       ||||||||||||    
T  458097 tatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccacaaatatattttcagcacaaaatatatttgaaacaaatcttttatattt 457998  T
Q  315 ttagcaacaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattag 386  Q
    |||||||||||||||  | ||||||||||||||||||||||||||| |||||| |||||||||| |||||||    
T  457997 ttagcaacaatattccccatccatcaaattttgagtcatactacaacattctccaccttgactctaaattag 457926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 15 - 360
Target Start/End: Original strand, 4104149 - 4104481
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatattcaccgccaatgagatggacatcatc 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||   ||||||||||||||||||| |  |  || |      | | | ||    
T  4104149 tgttgcctttctaaacccttgtttcagccccctctatctctctc--aaagtttagcctgatacaaggtctatatttatagtaaaagt-----ataac-tc 4104240  T
Q  115 ataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaata 214  Q
    ||||||||||||| |||| ||||||||   |||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4104241 ataaatttggaacaaataccacactga---tacgttt--tttttttctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaata 4104335  T
Q  215 tatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatattt 314  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||       ||||||||||||    
T  4104336 tatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcataaagtatatttgaaacaaatcttttatattt 4104435  T
Q  315 ttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  4104436 ttagcaacaatattcttcttccatcaaattttgagtcatactacaa 4104481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 15 - 360
Target Start/End: Complemental strand, 25533445 - 25533109
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgc--aaagtttgctctgatacaaggtctatattcaccgccaatgagatggacatca 112  Q
    |||||||||||||||||||||||||||||||||||||||||||| |  |||||||   ||||||||||||||||||| |  |  || |      | | |     
T  25533445 tgttgcctttctaaacccttgtttcagccccctctatctctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagt-----ataac- 25533352  T
Q  113 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 212  Q
    |||||||||| |||| |||||||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  25533351 tcataaatttagaacaaatatcacactgaagatacgttt-----ttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 25533257  T
Q  213 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 312  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       ||||||||||    
T  25533256 tatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcaaaaaatatatttgaaacaaatcttttatat 25533157  T
Q  313 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||    
T  25533156 ttttagcaacaatattctccatccatcaaattttgagtcatactacaa 25533109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 113 - 386
Target Start/End: Original strand, 53915836 - 53916106
Alignment:
Q  113 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 212  Q
    |||||||||||||||||||| |||||| |||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  53915836 tcataaatttggaacgaataccacactcaagatacgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 53915932  T
Q  213 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 312  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||    
T  53915933 tatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatat 53916032  T
Q  313 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattag 386  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||| |||||   ||||||||| |||||||    
T  53916033 ttttagcaacaatattctccatccctcaaattttgagtcatactacaacattcttcgccttgactctaaattag 53916106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 15 - 360
Target Start/End: Complemental strand, 455910 - 455575
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatattcaccgccaatgagatggacatcatc 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||  || ||||   ||||||||||||||||||| |  |  || |      | | | ||    
T  455910 tgttgcctttctaaacccttgtttcagccccctctatctctctc--aaggtttagcctgatacaaggtctatatttatagtaaaagt-----ataac-tc 455819  T
Q  115 ataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaata 214  Q
    ||||||||||||| |||| | ||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  455818 ataaatttggaacaaataccgcactgaagatacgttt--tttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaata 455721  T
Q  215 tatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatattt 314  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||       ||||||||||||    
T  455720 tatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccacaaatatattttcagcacaaaatatatttgaaacaaatcttttatattt 455621  T
Q  315 ttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    |||||||||||||||  | |||||||||||||||||||||||||||    
T  455620 ttagcaacaatattccccatccatcaaattttgagtcatactacaa 455575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 113 - 386
Target Start/End: Complemental strand, 42992199 - 42991929
Alignment:
Q  113 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 212  Q
    ||||||||||||||  ||||| |||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  42992199 tcataaatttggaattaatattacactgaagatacgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 42992103  T
Q  213 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 312  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||        |||||||||    
T  42992102 tatatttgcatcaaatcgttcttcatacaatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaaccttttatat 42992003  T
Q  313 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattag 386  Q
    ||||| |||||||||||| | ||||||||||||||||||||||||||| |||||  |||||||||| |||||||    
T  42992002 ttttaacaacaatattctccatccatcaaattttgagtcatactacaacattcttcaccttgactctaaattag 42991929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 112 - 360
Target Start/End: Complemental strand, 51943289 - 51943044
Alignment:
Q  112 atcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaa 211  Q
    ||||||||||||||||||||| ||||||||||||||||||         |||||||| ||||||||||||| ||| ||||||||||||||||||||||||    
T  51943289 atcataaatttggaacgaataccacactgaagatacgttt---ttctttctccttcaatgaaagaatatttacatcaaaaatataatattccctttcaaa 51943193  T
Q  212 atatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttata 311  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||       |||||||||    
T  51943192 atatatttgcatcaaatcattcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttata 51943093  T
Q  312 tttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  51943092 tttttagcaacaatattcttcatccatcaaattttgagtcatactacaa 51943044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 113 - 360
Target Start/End: Original strand, 10621882 - 10622125
Alignment:
Q  113 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 212  Q
    ||||||||||||||| |||| ||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  10621882 tcataaatttggaacaaataccacactgaagatacgttt----tttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 10621977  T
Q  213 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 312  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||       ||||||||||    
T  10621978 tatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatcttcagcacaatatatatttgaaacaaatcttttatat 10622077  T
Q  313 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||    
T  10622078 ttttagcaacaatattctccatccatcaaattttgagtcatactacaa 10622125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 113 - 360
Target Start/End: Complemental strand, 1313327 - 1313084
Alignment:
Q  113 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 212  Q
    ||||||||||||||||||||||||||| ||||||| |||         |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  1313327 tcataaatttggaacgaatatcacactaaagatactttt----tttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 1313232  T
Q  213 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 312  Q
    ||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||| ||||       || |||||||    
T  1313231 tatatttgcatcaaatcgttcttcatacggtacagaaatatatttattgtccataaatatattttcaacacaaaatatatttgaaacaaatcatttatat 1313132  T
Q  313 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||    
T  1313131 ttttagcaacaatattctccatccatcaaattttgagtcatactacaa 1313084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 113 - 360
Target Start/End: Original strand, 27635968 - 27636210
Alignment:
Q  113 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 212  Q
    |||||||||||||||||||| |||||||||||||| |||         |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  27635968 tcataaatttggaacgaataccacactgaagatacattt-----ttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 27636062  T
Q  213 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 312  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||       | ||||||||    
T  27636063 tatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaactaatattttatat 27636162  T
Q  313 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    |||||||||||||||||| | ||||||||||||| | |||||||||||    
T  27636163 ttttagcaacaatattctccatccatcaaattttaaatcatactacaa 27636210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 165 - 360
Target Start/End: Complemental strand, 41849001 - 41848806
Alignment:
Q  165 ttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtcc 264  Q
    |||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  41849001 ttcagttaaagaatatttgcatcaaaaatataatattccttttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtcc 41848902  T
Q  265 ataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    |||||||||||||||||||||||||| ||||       |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  41848901 ataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaa 41848806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 113 - 360
Target Start/End: Complemental strand, 42990199 - 42989954
Alignment:
Q  113 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 212  Q
    ||||||||||||||| |||| |||||||||||||| |||         |||||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  42990199 tcataaatttggaacaaataccacactgaagatacattt--tttttttctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaa 42990102  T
Q  213 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 312  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||       | ||||||||    
T  42990101 tatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatactttcagcaaaaaatatatttgaaacaaattttttatat 42990002  T
Q  313 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||    
T  42990001 ttttagcaacaatattctccatccatcaaattttgagtcatactacaa 42989954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 113 - 357
Target Start/End: Original strand, 53918004 - 53918245
Alignment:
Q  113 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 212  Q
    ||||||||||| |||||||| ||||||||||||||||||         |||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  53918004 tcataaatttgaaacgaataccacactgaagatacgttt---ttttttctccttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaa 53918100  T
Q  213 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 312  Q
    ||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||||||| |||| |||||||||| ||||       ||||||||||    
T  53918101 tatatttgcatcaaatcgttcttcatacggtaaaaaaatatatttattgtccataaatatatgttcaacacaaaatatatttgaaacaaatcttttatat 53918200  T
Q  313 ttttagcaacaatattcttcttccatcaaattttgagtcatacta 357  Q
    |||||||||||||||||| | ||||||||||||||||||||||||    
T  53918201 ttttagcaacaatattctccatccatcaaattttgagtcatacta 53918245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 6063700 - 6063770
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||||||||||||||||||    ||||||||||| ||||||||||||||||||    
T  6063700 tgttgcctttctaaacccttgtttcagccccctctatctct----caaagtttgctttgatacaaggtctatatt 6063770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 10084645 - 10084715
Alignment:
Q  17 ttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    ||||||||||||||||||||| |||||||||||||||||||  |||||||||||| |||||||||||||||||    
T  10084645 ttgcctttctaaacccttgttccagccccctctatctctct--caaagtttgctccgatacaaggtctatatt 10084715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 4308535 - 4308603
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||||    
T  4308535 tgttgcctttctaaacccttgtttcagccccctctatct------caaagtttgctctgatacaaggtctatatt 4308603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 196 - 279
Target Start/End: Complemental strand, 11066429 - 11066346
Alignment:
Q  196 aatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttca 279  Q
    ||||||| |||| ||||||||||||||||||||  ||||||||| | || ||||||||||||||||||||||||| ||||||||    
T  11066429 aatattctctttaaaaatatatttgcatcaaatattccttcatatggtaaaaaaatatatttattgtccataaatgtattttca 11066346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 11163153 - 11163085
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||||    
T  11163153 tgttgcctttctaaacccttgtttcagccccctctatct------caaagtttgctctgatacaaggtctatatt 11163085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 11170407 - 11170339
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||||    
T  11170407 tgttgcctttctaaacccttgtttcagccccctctatct------caaagtttgctctgatacaaggtctatatt 11170339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 27101435 - 27101507
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    ||||||||||||||||||||||||||||| ||||||||||| || |||  |||||||||||||||||||||||||    
T  27101435 tgttgcctttctaaacccttgtttcagcctcctctatctctatctcaa--tttgctctgatacaaggtctatatt 27101507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 9604861 - 9604934
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    ||||||||||||||||| |||||||||||||||||||||||||| || ||||| |||| ||||||||||||||||    
T  9604861 tgttgcctttctaaacc-ttgtttcagccccctctatctctctctcagagttttctctaatacaaggtctatatt 9604934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 303 - 360
Target Start/End: Complemental strand, 6561672 - 6561615
Alignment:
Q  303 tcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  6561672 tcttttatatttttagcaacaatattcttcatccatcaaatttcgagtcatactacaa 6561615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 10191565 - 10191635
Alignment:
Q  17 ttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    ||||||||||||||||||||| ||||||||| |||||||||  |||||||||||| |||||||||||||||||    
T  10191565 ttgcctttctaaacccttgttccagccccctttatctctct--caaagtttgctccgatacaaggtctatatt 10191635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 38890043 - 38889974
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||||||||   ||||||||||||||||    
T  38890043 tgttgcctttctaaacccttgtttcagccccctctatctctct--caaagtttgct---atacaaggtctatatt 38889974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 207 - 279
Target Start/End: Original strand, 54287487 - 54287559
Alignment:
Q  207 tcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttca 279  Q
    ||||||||||||||||||||||  ||||||||||  ||||||||| |||||||| ||||||||||||||||||    
T  54287487 tcaaaatatatttgcatcaaatattccttcatacagtacaaaaatgtatttattatccataaatatattttca 54287559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 3859531 - 3859463
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||||||||||||||||      | ||||||||||||||||||||||||||||    
T  3859531 tgttgcctttctaaacccttgtttcagccccctctatct------ccaagtttgctctgatacaaggtctatatt 3859463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 5522869 - 5522937
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||||||||||||||||      | ||||||||||||||||||||||||||||    
T  5522869 tgttgcctttctaaacccttgtttcagccccctctatct------ccaagtttgctctgatacaaggtctatatt 5522937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 51727260 - 51727328
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    ||||||||||||||||||||||||||||||||| |||||      ||||||||||||||||||||||||||||||    
T  51727260 tgttgcctttctaaacccttgtttcagccccctttatct------caaagtttgctctgatacaaggtctatatt 51727328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 18099424 - 18099493
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    ||||||| ||||||||||||||||||||||||||||||||||     |||||| |||||||||||||||||||||    
T  18099424 tgttgccattctaaacccttgtttcagccccctctatctctc-----aagtttactctgatacaaggtctatatt 18099493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 65
Target Start/End: Complemental strand, 42990307 - 42990257
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagt 65  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  42990307 tgttgcctttctaaacccttgtttcagccccctctatctctctctcaaagt 42990257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 212 - 277
Target Start/End: Original strand, 53974011 - 53974077
Alignment:
Q  212 atatatttgcatcaaatcgtcctt-catacgatacaaaaatatatttattgtccataaatatatttt 277  Q
    |||||||||||||||||| ||||| |||||| ||||||||||||||||||||| |||||||||||||    
T  53974011 atatatttgcatcaaatcttcctttcatacggtacaaaaatatatttattgtctataaatatatttt 53974077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 1321441 - 1321376
Alignment:
Q  18 tgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    ||||||||||||||||||||||||||||||||||||      |||||||||||||||||||| |||||||||    
T  1321441 tgcctttctaaacccttgtttcagccccctctatct------caaagtttgctctgatacaaagtctatatt 1321376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 152
Target Start/End: Complemental strand, 6561813 - 6561689
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatattcaccgccaatgagatggacatcatc 114  Q
    ||||||||||||||||||||||||||||||||||||||||      || |||| ||||||||||||||||||||| |  |  ||  | |   ||    ||    
T  6561813 tgttgcctttctaaacccttgtttcagccccctctatctc------aaggtttactctgatacaaggtctatatttatagagaaatata---ac----tc 6561727  T
Q  115 ataaatttggaacgaatatcacactgaagatacgtttc 152  Q
    ||||||||||||||||||||||||||||||||||||||    
T  6561726 ataaatttggaacgaatatcacactgaagatacgtttc 6561689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 26720551 - 26720483
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||| ||||||||||||||||||      | ||||||||||||||||||||||||||||    
T  26720551 tgttgcctttctaaacccttatttcagccccctctatct------ccaagtttgctctgatacaaggtctatatt 26720483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 30005844 - 30005801
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctc 58  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  30005844 tgttgcctttctaaacccttgtttcagccccctctatctctctc 30005801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 35918203 - 35918271
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||||||||||||||||      |||| |||||| ||||||||||||||||||    
T  35918203 tgttgcctttctaaacccttgtttcagccccctctatct------caaaatttgctatgatacaaggtctatatt 35918271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 43226089 - 43226021
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||||||||||||||||      | |||||||||||||||||| |||||||||    
T  43226089 tgttgcctttctaaacccttgtttcagccccctctatct------ccaagtttgctctgatacaatgtctatatt 43226021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 50494002 - 50493934
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||| |||||||||||||||||||||||||||||||||||      |||||||| ||||||||||||||||||    
T  50494002 tgttgcttttctaaacccttgtttcagccccctctatctctc------agtttgctttgatacaaggtctatatt 50493934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 6066050 - 6066119
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    ||||||||||||||||||||||||||||||||     |||| || ||||||||||| ||||||||||||||||||    
T  6066050 tgttgcctttctaaacccttgtttcagccccc-----ctctatctcaaagtttgctttgatacaaggtctatatt 6066119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 282
Target Start/End: Complemental strand, 11072801 - 11072731
Alignment:
Q  212 atatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 282  Q
    |||||||||||||||||| ||| | ||||| ||||||||| ||||| |||||||||||| |||||||||||    
T  11072801 atatatttgcatcaaatcttccgtaatacggtacaaaaatctatttgttgtccataaatgtattttcagca 11072731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 22114561 - 22114627
Alignment:
Q  17 ttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    ||||||||||||||||||||||||||||| |||||||      | ||||||||||||||||||||||||||||    
T  22114561 ttgcctttctaaacccttgtttcagccccttctatct------ccaagtttgctctgatacaaggtctatatt 22114627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 1626937 - 1626976
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  1626937 tgttgcctttctaaacccttgtttcagccccctctatctc 1626976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 5191656 - 5191617
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  5191656 tgttgcctttctaaacccttgtttcagccccctctatctc 5191617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 6719357 - 6719433
Alignment:
Q  21 ctttctaaacccttgtttcagccccctctatctctctcgc--------aaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||| ||||||||||||||||||||||| |        |||||||||||||||||||||||||||||    
T  6719357 ctttctaaacccttatttcagccccctctatctctctctctctctctcaaagtttgctctgatacaaggtctatatt 6719433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 15780863 - 15780795
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    ||||||| |||||||||||||||||||||||||||||||      | |||||| |||||||||||||||||||||    
T  15780863 tgttgccattctaaacccttgtttcagccccctctatct------ccaagtttactctgatacaaggtctatatt 15780795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 24979710 - 24979642
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    ||||| |||||||||||||||||||||||||||||||||      |||||||| |||||||||||||| ||||||    
T  24979710 tgttgtctttctaaacccttgtttcagccccctctatct------caaagtttactctgatacaaggtatatatt 24979642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 28102256 - 28102295
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  28102256 tgttgcctttctaaacccttgtttcagccccctctatctc 28102295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 28137549 - 28137588
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  28137549 tgttgcctttctaaacccttgtttcagccccctctatctc 28137588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 35777424 - 35777356
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||| ||||||||||||||||||||||||||||||||      ||||||||||| |||||||| |||||||||    
T  35777424 tgttgcttttctaaacccttgtttcagccccctctatct------caaagtttgctttgatacaatgtctatatt 35777356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 38210373 - 38210330
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctc 58  Q
    |||||| |||||||||||||||||||||||||||||||||||||    
T  38210373 tgttgcttttctaaacccttgtttcagccccctctatctctctc 38210330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 43228294 - 43228226
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||| ||||||||||||||||||||||      | |||||||||||||||||| |||||||||    
T  43228294 tgttgcctttctaaactcttgtttcagccccctctatct------ccaagtttgctctgatacaatgtctatatt 43228226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 45882942 - 45882903
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  45882942 tgttgcctttctaaacccttgtttcagccccctctatctc 45882903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 47149149 - 47149188
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  47149149 tgttgcctttctaaacccttgtttcagccccctctatctc 47149188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 18097154 - 18097223
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    ||||||| |||||||||||||||| |||||||||||||||||     |||||| || ||||||||||||||||||    
T  18097154 tgttgccattctaaacccttgtttgagccccctctatctctc-----aagtttactatgatacaaggtctatatt 18097223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 42992289 - 42992247
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctct 57  Q
    |||||||||| ||||||||||||||||||||||||||||||||    
T  42992289 tgttgcctttttaaacccttgtttcagccccctctatctctct 42992247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 303 - 352
Target Start/End: Original strand, 53974148 - 53974197
Alignment:
Q  303 tcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 352  Q
    ||||||||||||||| |||||| ||||||| |||||||||||||||||||    
T  53974148 tcttttatatttttaacaacaacattcttcatccatcaaattttgagtca 53974197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 29956682 - 29956646
Alignment:
Q  22 tttctaaacccttgtttcagccccctctatctctctc 58  Q
    |||||||||||||||||||||||||||||||||||||    
T  29956682 tttctaaacccttgtttcagccccctctatctctctc 29956646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 10958577 - 10958645
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    ||||||| ||||||||||||||||||||||||||||||| |      | |||| |||||||||||||||||||||    
T  10958577 tgttgccattctaaacccttgtttcagccccctctatcttt------atgtttactctgatacaaggtctatatt 10958645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 28100295 - 28100334
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  28100295 tgttgcttttctaaacccttgtttcagccccctctatctc 28100334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 32219098 - 32219059
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  32219098 tgttgcctttctgaacccttgtttcagccccctctatctc 32219059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 32264293 - 32264332
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  32264293 tgttgcctttctaaacccttgtttgagccccctctatctc 32264332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 43423717 - 43423756
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  43423717 tgttgcctttctaaacccttgtttcagccccctctttctc 43423756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 47701849 - 47701888
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  47701849 tgttgcctttctaaacccttgtttcagccccctttatctc 47701888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 51675009 - 51675048
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  51675009 tgttgtctttctaaacccttgtttcagccccctctatctc 51675048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 53
Target Start/End: Original strand, 10956281 - 10956319
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatct 53  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  10956281 tgttgccattctaaacccttgtttcagccccctctatct 10956319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 306 - 352
Target Start/End: Complemental strand, 11072690 - 11072644
Alignment:
Q  306 tttatatttttagcaacaatattcttcttccatcaaattttgagtca 352  Q
    ||||||||||| |||||||| |||||| |||||||||||||||||||    
T  11072690 tttatattttttgcaacaatcttcttcatccatcaaattttgagtca 11072644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 10621784 - 10621864
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctcta------tctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||| ||||||||||||||||||||| |||||||      |||||||| ||||||||   |||||||||||||||||||    
T  10621784 tgttgcttttctaaacccttgtttcagcaccctctatctctctctctctctcaaagtttagcctgatacaaggtctatatt 10621864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 41849147 - 41849077
Alignment:
Q  23 ttctaaacccttgtttcagccccctct----atctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||||    ||||||||| ||||||||   ||||||||| |||||||||    
T  41849147 ttctaaacccttgtttcagccccctctatctatctctctctcaaagtttagcctgatacaatgtctatatt 41849077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 3314687 - 3314648
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    |||| ||||||||||||||| |||||||||||||||||||    
T  3314687 tgttacctttctaaacccttatttcagccccctctatctc 3314648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 235 - 282
Target Start/End: Original strand, 5535882 - 5535929
Alignment:
Q  235 tcatacgatacaaaaatatatttattgtccataaatatattttcagca 282  Q
    |||||||||||||| |||| |||  |||||||||||||||||||||||    
T  5535882 tcatacgatacaaatatatcttttctgtccataaatatattttcagca 5535929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 5927018 - 5927057
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    |||||| ||||||||||||||||||||||| |||||||||    
T  5927018 tgttgcatttctaaacccttgtttcagccctctctatctc 5927057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 6231452 - 6231413
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||| |||||||||||||| |||||||||    
T  6231452 tgttgcctttctaaatccttgtttcagcccgctctatctc 6231413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 23 - 54
Target Start/End: Original strand, 27635889 - 27635920
Alignment:
Q  23 ttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||    
T  27635889 ttctaaacccttgtttcagccccctctatctc 27635920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 28761682 - 28761721
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||| |||||||||||||||||||| |||||||||||||    
T  28761682 tgttgtctttctaaacccttgtttcaaccccctctatctc 28761721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 43421669 - 43421708
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    |||||||||||||||||||||||||| |||| ||||||||    
T  43421669 tgttgcctttctaaacccttgtttcaaccccttctatctc 43421708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 51943374 - 51943335
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||| |||||||||| |||||||||||    
T  51943374 tgttgcctttctaaacctttgtttcagcaccctctatctc 51943335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 151
Target Start/End: Complemental strand, 41849059 - 41849021
Alignment:
Q  113 tcataaatttggaacgaatatcacactgaagatacgttt 151  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  41849059 tcataaatttggaacaaataccacactgaagatacgttt 41849021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 53
Target Start/End: Original strand, 53468709 - 53468747
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatct 53  Q
    ||||||| ||||||||||||||||||||||||| |||||    
T  53468709 tgttgccattctaaacccttgtttcagccccctttatct 53468747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 55
Target Start/End: Complemental strand, 3306795 - 3306762
Alignment:
Q  22 tttctaaacccttgtttcagccccctctatctct 55  Q
    |||||||||||||||||||||||||| |||||||    
T  3306795 tttctaaacccttgtttcagccccctatatctct 3306762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 27101540 - 27101582
Alignment:
Q  45 cctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||| |||  |||||||||||||||||||||||||    
T  27101540 cctctatctctctctcaa--tttgctctgatacaaggtctatatt 27101582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 53
Target Start/End: Original strand, 53915760 - 53915788
Alignment:
Q  25 ctaaacccttgtttcagccccctctatct 53  Q
    |||||||||||||||||||||||||||||    
T  53915760 ctaaacccttgtttcagccccctctatct 53915788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 179; Significance: 2e-96; HSPs: 87)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 113 - 384
Target Start/End: Original strand, 22132741 - 22133009
Alignment:
Q  113 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 212  Q
    ||||||||||||||| |||| ||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  22132741 tcataaatttggaacaaataccacactgaagatacgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 22132837  T
Q  213 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 312  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||    
T  22132838 tatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatat 22132937  T
Q  313 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaatt 384  Q
    |||||||||||||||||| | ||||||||||||||| ||||||||||| |||||| ||||||||||||||||    
T  22132938 ttttagcaacaatattctccatccatcaaattttgaatcatactacaacattctccaccttgactccaaatt 22133009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 15 - 386
Target Start/End: Original strand, 14787687 - 14788045
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatattcaccgccaatgagatggacatcatc 114  Q
    ||||||| ||||||||||||||||||||||||||||||||||    |||||||  | |||||||||||||||||| |  |  || |      | | | ||    
T  14787687 tgttgccattctaaacccttgtttcagccccctctatctctc----aaagtttagtatgatacaaggtctatatttatagtaaaagt-----ataac-tc 14787776  T
Q  115 ataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaata 214  Q
    |||||||||||||||||| ||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  14787777 ataaatttggaacgaataccacactgaagatacgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaata 14787873  T
Q  215 tatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatattt 314  Q
    ||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||       ||||||||||||    
T  14787874 tatttgcatcaaatcgttctttatacggtacaaaaatatatttattgtccataaatatattttcaccacaaaatatatttgaaacaaatcttttatattt 14787973  T
Q  315 ttagcaacaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattag 386  Q
    ||||||||| |||||| | ||||||||||||||||||||||||||| |||||| |||||||||| |||||||    
T  14787974 ttagcaacattattctccatccatcaaattttgagtcatactacaacattctccaccttgactctaaattag 14788045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 166; E-Value: 9e-89
Query Start/End: Original strand, 15 - 360
Target Start/End: Original strand, 17662490 - 17662824
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatattcaccgccaatgagatggacatcatc 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| |  |  || |      | | | ||    
T  17662490 tgttgcctttctaaacccttgtttcagccccctctatctctctc--aaagtttgctctgatacaaggtctatatttatagtaaaagt-----ataac-tc 17662581  T
Q  115 ataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaata 214  Q
    ||||||||||||| |||| |||||||||||||| |||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  17662582 ataaatttggaacaaataccacactgaagatactttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaata 17662678  T
Q  215 tatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatattt 314  Q
    ||||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||        ||||||||||||    
T  17662679 tatttgcatcaaatcgttcttcgtacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttaaaacaaatcttttatattt 17662778  T
Q  315 ttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    |||||||||||||||| | ||||||||||||  |||||||||||||    
T  17662779 ttagcaacaatattctccatccatcaaatttgtagtcatactacaa 17662824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 113 - 386
Target Start/End: Complemental strand, 5100988 - 5100719
Alignment:
Q  113 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 212  Q
    |||||||||||||||||||| || | |||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  5100988 tcataaatttggaacgaataccagattgaagatacgttt----tttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 5100893  T
Q  213 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 312  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| |||        ||||||||||    
T  5100892 tatatttgcatcaaatcgttcttcatacggtacaaaaatatatttgttgtccataaatatattttcagcacaaaatatatttaaaacaaatcttttatat 5100793  T
Q  313 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattag 386  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||| |||||| |||||||||| |||||||    
T  5100792 ttttagcaacaatattctccatccatcaaattttgagtcatactacaacattctccaccttgactctaaattag 5100719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 113 - 360
Target Start/End: Original strand, 22134972 - 22135217
Alignment:
Q  113 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 212  Q
    ||||||||||||||| |||| ||||||||||||||||||         ||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  22134972 tcataaatttggaacaaataccacactgaagatacgttt--tttttttctccttcagtgaaagaatatttgaatcaaaaatataatattccctttcaaaa 22135069  T
Q  213 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 312  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||    
T  22135070 tatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatat 22135169  T
Q  313 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||    
T  22135170 ttttagcaacaatattctccatccatcaaattttgagtcatactacaa 22135217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 15 - 360
Target Start/End: Complemental strand, 24348295 - 24347961
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagttt-gctctgatacaaggtctatattcaccgccaatgagatggacatcat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||| |||||||||||||||||| |  |  || |      | | | |    
T  24348295 tgttgcctttctaaacccttgtttcagccccctctatctctctc--aaagtttagct-tgatacaaggtctatatttatagtaaaagt-----ataac-t 24348205  T
Q  114 cataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaat 213  Q
    |||||||||||||| |||| |||| ||||||||| |||         |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  24348204 cataaatttggaacaaataccacattgaagatactttt--tttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaat 24348107  T
Q  214 atatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatt 313  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||       |||||||||||    
T  24348106 atatttgcatcaaatcgttcttcatacaatacaaaaatatatttattgtccataaatatattttc-gcacaaaatatatttgaaacaaatcttttatatt 24348008  T
Q  314 tttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||    
T  24348007 tttagcaacaatattctccatccatcaaattttgagtcatactacaa 24347961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 161 - 360
Target Start/End: Complemental strand, 56030390 - 56030191
Alignment:
Q  161 ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttatt 260  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  56030390 ctccttcagtgaaagaatatttgcaccaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttatt 56030291  T
Q  261 gtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    |||||||||||||||||||||||||||||| ||||       |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  56030290 gtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaa 56030191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 161 - 360
Target Start/End: Original strand, 44600227 - 44600426
Alignment:
Q  161 ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttatt 260  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  44600227 ctccttcagtgaaagaatatttgcatcaaaaatataatattcccttttaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttatt 44600326  T
Q  261 gtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    ||||||||||||||||||||||||| |||| ||||       |||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||    
T  44600327 gtccataaatatattttcagcacaatatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaatttttgagtcatactacaa 44600426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 115 - 346
Target Start/End: Complemental strand, 30136560 - 30136331
Alignment:
Q  115 ataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaata 214  Q
    |||||||| ||||||||||||||||||||||||||||         |||||||| |||||||||||||| || ||||||||||||||| |||| ||||||    
T  30136560 ataaatttagaacgaatatcacactgaagatacgttt--tttttttctccttcaatgaaagaatatttgaatcaaaaatataatattctcttttaaaata 30136463  T
Q  215 tatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatattt 314  Q
    ||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||| |||| ||||       ||||||||||||    
T  30136462 tatttgcatcaaatcgttcttcatacagtacaaaaatatatttattgtccataaatatattttcagcacaatatatatttgaaacaaatcttttatattt 30136363  T
Q  315 ttagcaacaatattcttcttccatcaaatttt 346  Q
    |||||||||||||||| | | |||||||||||    
T  30136362 ttagcaacaatattctccattcatcaaatttt 30136331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 212 - 360
Target Start/End: Original strand, 47211158 - 47211306
Alignment:
Q  212 atatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttata 311  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||       |||||||||    
T  47211158 atatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttgagcacaaaatatatttgaaacaaatcttttata 47211257  T
Q  312 tttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    ||||||||||||||||||| | ||||||||||||| |||||||||||||    
T  47211258 tttttagcaacaatattctccatccatcaaattttaagtcatactacaa 47211306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 121 - 360
Target Start/End: Original strand, 38890478 - 38890699
Alignment:
Q  121 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatatt-ccctttcaaaatatattt 219  Q
    ||||||||||||||||| ||||||||| ||||        |||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  38890478 ttggaacgaatatcacattgaagatacatttcttttttt-ctcctttagtgaaagaatatttgcatcaaaaatataatatttccctttcaaaatatattt 38890576  T
Q  220 gcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagc 319  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  |  |||||                |||||||||||||||||    
T  38890577 gcatcaaatcgtccttcatacaatacaaaaatatatttattgtccataaatatatttgaa--acaaa----------------tcttttatatttttagc 38890658  T
Q  320 aacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    ||||||||||| | |||||||||||||||||||| ||||||    
T  38890659 aacaatattctccatccatcaaattttgagtcatgctacaa 38890699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 196 - 360
Target Start/End: Complemental strand, 10112787 - 10112628
Alignment:
Q  196 aatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttg 295  Q
    ||||||| |||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  10112787 aatattctctttcaaa-tatatttacatcaaatcttccttcatacgatacaaaaatatatttattgtccataaatatagtttcagcacaaaatatatttg 10112689  T
Q  296 nnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
            ||||||||||||||||||||||||||||| | || |||||||| |||||||||||||    
T  10112688 aaac----cttttatatttttagcaacaatattcttcattcaacaaattttaagtcatactacaa 10112628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 113 - 255
Target Start/End: Complemental strand, 19322689 - 19322547
Alignment:
Q  113 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 212  Q
    |||||||||||||| |||||||||| ||||||||| ||||        |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  19322689 tcataaatttggaatgaatatcacattgaagatacatttcttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 19322590  T
Q  213 tatatttgcatcaaatcgtccttcatacgatacaaaaatatat 255  Q
    ||||||||||||||||||||||| ||||  |||||||||||||    
T  19322589 tatatttgcatcaaatcgtcctttatacagtacaaaaatatat 19322547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 196 - 360
Target Start/End: Complemental strand, 9022225 - 9022062
Alignment:
Q  196 aatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttg 295  Q
    |||||||||||| ||||||||||||||||||||| | ||||||||| || ||||||||||||||||| ||||||||||||||||||| ||||||| ||||    
T  9022225 aatattcccttttaaaatatatttgcatcaaatctttcttcatacggtagaaaaatatatttattgt-cataaatatattttcagcaaaaaatatatttg 9022127  T
Q  296 nnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
           || |||||||||| | ||||||||||  || ||||| ||||||||| |||||||||||    
T  9022126 aaacaaatcatttatattttcaacaacaatatttctcatccataaaattttgaatcatactacaa 9022062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 208 - 360
Target Start/End: Complemental strand, 9863650 - 9863501
Alignment:
Q  208 caaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttt 307  Q
    |||||||||||||||||||||| |||||||| |   ||||||||||||||||||| |||||||||||||| |||||||||||| ||||       || ||    
T  9863650 caaaatatatttgcatcaaatcttccttcatgc---acaaaaatatatttattgttcataaatatatttttagcacaaaatatgtttgaaacaaatcatt 9863554  T
Q  308 tatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    ||||||||||| ||||||||  ||| |||| |||||||||||||||| |||||    
T  9863553 tatatttttagtaacaatatatttcatccaacaaattttgagtcatattacaa 9863501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 196 - 282
Target Start/End: Original strand, 54929094 - 54929180
Alignment:
Q  196 aatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 282  Q
    ||||||||  || ||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  54929094 aatattcctattaaaaatatatttgcatcaaatcttccttcatacggtacaaaaatatattttttgtccataaatatattttcagca 54929180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 15 - 231
Target Start/End: Complemental strand, 53405207 - 53405001
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatattcaccgccaatgagatggacatcatc 114  Q
    ||||||||||||||||||||||||||||||| ||||||||||||  |||||||   ||||||||||||||||||| |  |  || |      | | | ||    
T  53405207 tgttgcctttctaaacccttgtttcagcccc-tctatctctctc--aaagtttagcctgatacaaggtctatatttatagtaaaagt-----ataac-tc 53405117  T
Q  115 ataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaata 214  Q
    ||||||||||||| |||| ||||||||| ||||||||         |||||| ||||||||||||||||||| ||||||||||| || ||||||||||||    
T  53405116 ataaatttggaacaaataccacactgaaaatacgttt-ttttttttctcctttagtgaaagaatatttgcatcaaaaatataatttttcctttcaaaata 53405018  T
Q  215 tatttgcatcaaatcgt 231  Q
    |||||||||||||||||    
T  53405017 tatttgcatcaaatcgt 53405001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 38409282 - 38409208
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||| |||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  38409282 tgttgcctttttaaaccattgtttcagccccctctatctccctctcaaagtttgctctgatacaaggtctatatt 38409208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 5637721 - 5637793
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||    
T  5637721 tgttgcctttctaaactcttgtttcagccccctctatctctct--caaagtttgctcttatacaaggtctatatt 5637793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 8631675 - 8631747
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||| |||||||||    
T  8631675 tgttgcctttctaaacccttgtttcagccccctctatctctct--caaagtttgctttgatacaaagtctatatt 8631747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 203 - 282
Target Start/End: Complemental strand, 10979755 - 10979676
Alignment:
Q  203 cctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 282  Q
    ||||| ||||||||||||||||||||| ||||||||||   |||||||||||||| ||||||||||||||||||||||||    
T  10979755 cctttaaaaatatatttgcatcaaatcttccttcatacagcacaaaaatatatttgttgtccataaatatattttcagca 10979676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 47210996 - 47211070
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||||||||||||||||| ||| ||||||||   |||||||||||||||||||    
T  47210996 tgttgcctttctaaacccttgtttcagccccctctatctccctctcaaagtttagcctgatacaaggtctatatt 47211070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 5198497 - 5198429
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||||    
T  5198497 tgttgcctttctaaacccttgtttcagccccctctatct------caaagtttgctctgatacaaggtctatatt 5198429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 24888873 - 24888805
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||    
T  24888873 tgttgcctttctaaacccttgtttcagccccctctatctct------aagtttgctctgatacaaggtctatatt 24888805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 7941398 - 7941328
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||||||||||||||||||| ||    |||||||||||||||| |||||||||    
T  7941398 tgttgcctttctaaacccttgtttcagccccctctatctctcccg----gtttgctctgatacaacgtctatatt 7941328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 9148330 - 9148260
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    ||||||||||||||||||||| |||||||||||||||||||    |||||||||||||||||||||| |||||||    
T  9148330 tgttgcctttctaaacccttgcttcagccccctctatctct----caaagtttgctctgatacaaggcctatatt 9148260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 303 - 360
Target Start/End: Original strand, 14789512 - 14789569
Alignment:
Q  303 tcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  14789512 tcttttatatttttagcaacattattcttcatccatcaaattttgagtcatactacaa 14789569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 6764916 - 6764848
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    ||||||||||||||||||||||||||||||| |||||||      ||||||||||||||||||||||||||||||    
T  6764916 tgttgcctttctaaacccttgtttcagccccttctatct------caaagtttgctctgatacaaggtctatatt 6764848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 11006493 - 11006565
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||   |  ||||||||||||||||||||    
T  11006493 tgttgcctttctaaacccttgtttcagccccctctatctctctctcaaa--atagtctgatacaaggtctatatt 11006565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 11435032 - 11434964
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||||||||||||||||      | ||||||||||||||||||||||||||||    
T  11435032 tgttgcctttctaaacccttgtttcagccccctctatct------ccaagtttgctctgatacaaggtctatatt 11434964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 40637151 - 40637083
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||||||||||||||||      | ||||||||||||||||||||||||||||    
T  40637151 tgttgcctttctaaacccttgtttcagccccctctatct------ccaagtttgctctgatacaaggtctatatt 40637083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 11008822 - 11008894
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||  | || |||||||||||||||||||    
T  11008822 tgttgcctttctaaacccttgtttcagccccctctatctctctctcaaa-atagc-ctgatacaaggtctatatt 11008894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 18709419 - 18709495
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctcta--tctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    ||||||||||||||||||||||||||||||||||||  |||||||| ||||||||   || ||||||||||||||||    
T  18709419 tgttgcctttctaaacccttgtttcagccccctctatctctctctctcaaagtttagcctaatacaaggtctatatt 18709495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 36919841 - 36919911
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    ||||||||||||||||||||||||||||||||| ||||| |    |||||||| |||||||||||||||||||||    
T  36919841 tgttgcctttctaaacccttgtttcagccccctatatctat----caaagtttactctgatacaaggtctatatt 36919911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 37089627 - 37089698
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    ||||||| ||||||||||||||||||||||||||||||||||||   ||||||   |||||||||||||||||||    
T  37089627 tgttgccattctaaacccttgtttcagccccctctatctctctc---aagtttagcctgatacaaggtctatatt 37089698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 261 - 360
Target Start/End: Complemental strand, 19322510 - 19322410
Alignment:
Q  261 gtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaa-tattcttcttccatcaaattttgagtcatactaca 359  Q
    |||||||||||||||||||| | ||||||| |||        ||||||||||||||||||| || |||||| | ||||||||||||||||||||||||||    
T  19322510 gtccataaatatattttcagtataaaatatatttaaaacaaatcttttatatttttagcaaaaaatattctccatccatcaaattttgagtcatactaca 19322411  T
Q  360 a 360  Q
    |    
T  19322410 a 19322410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 22044646 - 22044714
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||||||||||||||||      | |||||||||||||||||||| |||||||    
T  22044646 tgttgcctttctaaacccttgtttcagccccctctatct------ccaagtttgctctgatacaaggcctatatt 22044714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 22802990 - 22803058
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    ||||||| |||||||||||||||||||||||||||||||      |||||||| |||||||||||||||||||||    
T  22802990 tgttgccattctaaacccttgtttcagccccctctatct------caaagtttactctgatacaaggtctatatt 22803058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 47274804 - 47274736
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||||||||||||||||      ||||||||  ||||||||||||||||||||    
T  47274804 tgttgcctttctaaacccttgtttcagccccctctatct------caaagtttagtctgatacaaggtctatatt 47274736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 48486396 - 48486328
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    ||||||| |||||||||||||||||||||||||||||||      |||||||| |||||||||||||||||||||    
T  48486396 tgttgccattctaaacccttgtttcagccccctctatct------caaagtttactctgatacaaggtctatatt 48486328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 51015323 - 51015255
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||||||||||||||||      | |||||||||||||||||| |||||||||    
T  51015323 tgttgcctttctaaacccttgtttcagccccctctatct------ccaagtttgctctgatacaaagtctatatt 51015255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 24446828 - 24446874
Alignment:
Q  8 ccctagctgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||    
T  24446828 ccctagttgttgcctttctaaacccttgtttcagccccctctatctc 24446874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 196 - 352
Target Start/End: Original strand, 38209098 - 38209259
Alignment:
Q  196 aatattccctttcaaa-atatatttgcatcaaatcgtccttcatacgatacaaaaatatatt--tattgtc--cataaatatattttcagcacaaaatat 290  Q
    |||||||| ||||||| |||||||||||||||||| ||||||||||  ||||||||||||||  |||| ||  ||  ||| |  ||  ||||||||||||    
T  38209098 aatattccttttcaaatatatatttgcatcaaatcttccttcatacagtacaaaaatatatttatattttcaacaacaatcttcttgaagcacaaaatat 38209197  T
Q  291 ctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 352  Q
     |||        ||||||||||||||| |||||||||| ||| |||||||||||||||||||    
T  38209198 atttaaaacaaatcttttatatttttaacaacaatatttttcatccatcaaattttgagtca 38209259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 36921750 - 36921819
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||| ||||||||||| |||||||||||||||    ||||||| |||||||||||||||||||||    
T  36921750 tgttgcctttctaagcccttgtttca-ccccctctatctctc----aaagtttactctgatacaaggtctatatt 36921819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 619703 - 619771
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    ||||| |||| ||||||||||||||||||||||||||||      |||||||| |||||||||||||||||||||    
T  619703 tgttgtctttataaacccttgtttcagccccctctatct------caaagtttactctgatacaaggtctatatt 619771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 9174402 - 9174470
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||| ||||||||||||||||||||||||||||||||      | ||||||||| ||||||||||||||||||    
T  9174402 tgttgcttttctaaacccttgtttcagccccctctatct------ccaagtttgctttgatacaaggtctatatt 9174470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 9176730 - 9176798
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||| ||||||||||||||||||||||||||||||||      | ||||||||| ||||||||||||||||||    
T  9176730 tgttgcttttctaaacccttgtttcagccccctctatct------ccaagtttgctttgatacaaggtctatatt 9176798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 16934399 - 16934467
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||| ||||||||||||||| ||||||||||||||||      ||||||||||| ||||||||||||||||||    
T  16934399 tgttgcttttctaaacccttgtatcagccccctctatct------caaagtttgctttgatacaaggtctatatt 16934467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 18847230 - 18847162
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||| ||||||||||||      ||||||||| | ||||||||||||||||||    
T  18847230 tgttgcctttctaaacccttgtttcaaccccctctatct------caaagtttgttttgatacaaggtctatatt 18847162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 22046941 - 22046980
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  22046941 tgttgcctttctaaacccttgtttcagccccctctatctc 22046980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 22132646 - 22132723
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagcccc---ctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||||||||    ||| |||||||| ||||||||   |||||||||||||||||||    
T  22132646 tgttgcctttctaaacccttgtttcagcccctctatctctctctctctcaaagtttagcctgatacaaggtctatatt 22132723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 22801126 - 22801186
Alignment:
Q  23 ttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||||||||      |||||||| |||||||||||||||||||||    
T  22801126 ttctaaacccttgtttcagccccctctatct------caaagtttactctgatacaaggtctatatt 22801186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 220 - 279
Target Start/End: Original strand, 29609838 - 29609897
Alignment:
Q  220 gcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttca 279  Q
    |||||||||| ||||||||||| |||||||||||||||| | | ||||||||||||||||    
T  29609838 gcatcaaatcttccttcatacggtacaaaaatatatttactcttcataaatatattttca 29609897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 31849855 - 31849894
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  31849855 tgttgcctttctaaacccttgtttcagccccctctatctc 31849894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 37313322 - 37313361
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  37313322 tgttgcctttctaaacccttgtttcagccccctctatctc 37313361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 40091671 - 40091739
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    ||||| |||||||||||||||||||||||||||||||||      |||||||| || ||||||||||||||||||    
T  40091671 tgttgtctttctaaacccttgtttcagccccctctatct------caaagtttactttgatacaaggtctatatt 40091739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 44600094 - 44600162
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||| ||||||||||||||||||||||||||||||||      ||||||||||| | ||||||||||||||||    
T  44600094 tgttgcttttctaaacccttgtttcagccccctctatct------caaagtttgctttaatacaaggtctatatt 44600162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 47868478 - 47868410
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||| ||||||||| ||||||||      | ||||||||||||||||||||||||||||    
T  47868478 tgttgcctttctaaacccttctttcagccctctctatct------ccaagtttgctctgatacaaggtctatatt 47868410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 2485128 - 2485197
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||| ||||||||     |||  | ||||||||||||||||||||||||||||||    
T  2485128 tgttgcctttctaaacccttgttttagccccct-----tctagctcaaagtttgctctgatacaaggtctatatt 2485197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 2891394 - 2891356
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatct 53  Q
    |||||||||||||||||||||||||||||||||||||||    
T  2891394 tgttgcctttctaaacccttgtttcagccccctctatct 2891356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 56
Target Start/End: Complemental strand, 16453386 - 16453345
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctc 56  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  16453386 tgttgcctttttaaacccttgtttcagccccctctatctctc 16453345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 3937465 - 3937504
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  3937465 tgttgcctttctaaacccttgtttcagctccctctatctc 3937504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 231 - 282
Target Start/End: Original strand, 5516701 - 5516752
Alignment:
Q  231 tccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 282  Q
    |||||||||||||| ||||||||||||||| || ||||||||||||| ||||    
T  5516701 tccttcatacgataaaaaaatatatttattatctataaatatatttttagca 5516752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 16932045 - 16932113
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||| ||||||||||||||| ||||||||||||||||      ||||||||||| ||||||||||| ||||||    
T  16932045 tgttgcttttctaaacccttgtatcagccccctctatct------caaagtttgctttgatacaaggtttatatt 16932113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 22780629 - 22780672
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctc 58  Q
    |||||| ||||||||||| |||||||||||||||||||||||||    
T  22780629 tgttgcttttctaaacccctgtttcagccccctctatctctctc 22780672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 22782994 - 22783037
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctc 58  Q
    |||||| ||||||||||| |||||||||||||||||||||||||    
T  22782994 tgttgcttttctaaacccctgtttcagccccctctatctctctc 22783037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 33415743 - 33415782
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  33415743 tgttacctttctaaacccttgtttcagccccctctatctc 33415782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 36378369 - 36378330
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  36378369 tgttgcctttctaaacccttgtttcagccccgtctatctc 36378330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 38928434 - 38928473
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  38928434 tgttgcctttctaaactcttgtttcagccccctctatctc 38928473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 187
Target Start/End: Original strand, 47211088 - 47211160
Alignment:
Q  113 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcata 187  Q
    ||||||||||||||| |||| ||||||||||||||||||         |||||||||||||||||||||||||||    
T  47211088 tcataaatttggaacaaataccacactgaagatacgttt--tttttttctccttcagtgaaagaatatttgcata 47211160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 13544020 - 13543963
Alignment:
Q  31 ccttgtttcagccccctctatctctctcgcaaagtttgc-tctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||||  |||||||| | ||||||||||| ||||||||    
T  13544020 ccttgtttcagccccctctatctctct--caaagtttacatctgatacaagatctatatt 13543963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 12396101 - 12396140
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||| ||||||||||||||| ||||||||    
T  12396101 tgttgcctttctaaatccttgtttcagccccatctatctc 12396140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 12401063 - 12401102
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||| ||||||||||||||| ||||||||    
T  12401063 tgttgcctttctaaatccttgtttcagccccatctatctc 12401102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 243 - 282
Target Start/End: Original strand, 14647175 - 14647214
Alignment:
Q  243 tacaaaaatatatttattgtccataaatatattttcagca 282  Q
    ||||||||||||||| |||||||| |||||||||||||||    
T  14647175 tacaaaaatatatttgttgtccatgaatatattttcagca 14647214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 23 - 54
Target Start/End: Complemental strand, 19095951 - 19095920
Alignment:
Q  23 ttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||    
T  19095951 ttctaaacccttgtttcagccccctctatctc 19095920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 24879066 - 24879027
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  24879066 tgttgtctttctaaaccctagtttcagccccctctatctc 24879027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 313 - 348
Target Start/End: Original strand, 29609948 - 29609983
Alignment:
Q  313 ttttagcaacaatattcttcttccatcaaattttga 348  Q
    |||||||||||||||||||| |||||||||||||||    
T  29609948 ttttagcaacaatattcttcatccatcaaattttga 29609983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 38270242 - 38270281
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||| | ||||||||    
T  38270242 tgttgcctttctaaacccttgtttcagcctcttctatctc 38270281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 52942702 - 52942740
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  52942702 tgttgcctttctaaacccttgtttcag-cccctctatctc 52942740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 151
Target Start/End: Original strand, 18709513 - 18709551
Alignment:
Q  113 tcataaatttggaacgaatatcacactgaagatacgttt 151  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  18709513 tcataaatttggaacaaataccacactgaagatacgttt 18709551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 45
Target Start/End: Original strand, 22134871 - 22134901
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagcccc 45  Q
    |||||||||||||||||||||||||||||||    
T  22134871 tgttgcctttctaaacccttgtttcagcccc 22134901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 303 - 352
Target Start/End: Original strand, 54929220 - 54929267
Alignment:
Q  303 tcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 352  Q
    |||||||||||||||||||||||||| |  |||||||||||||| |||||    
T  54929220 tcttttatatttttagcaacaatattat--ttccatcaaattttaagtca 54929267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 3824826 - 3824897
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaag-tttgctctgatacaaggtctatatt 89  Q
    |||||| ||||||||||  ||||||||||||||||||||||||  |||||   | |||||||||||||||||||||    
T  3824826 tgttgcttttctaaacc--tgtttcagccccctctatctctct--caaagaaatactctgatacaaggtctatatt 3824897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 16455356 - 16455323
Alignment:
Q  23 ttctaaacccttgtttcagccccctctatctctc 56  Q
    ||||||||||||||||||||||||| ||||||||    
T  16455356 ttctaaacccttgtttcagccccctttatctctc 16455323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 346
Target Start/End: Original strand, 5516793 - 5516833
Alignment:
Q  306 tttatatttttagcaacaatattcttcttccatcaaatttt 346  Q
    ||||||||||||||||||||||||| | | |||||||||||    
T  5516793 tttatatttttagcaacaatattctccattcatcaaatttt 5516833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 43
Target Start/End: Original strand, 18409603 - 18409631
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagcc 43  Q
    |||||||||||||||||||||||||||||    
T  18409603 tgttgcctttctaaacccttgtttcagcc 18409631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 89
Target Start/End: Complemental strand, 25357713 - 25357646
Alignment:
Q  22 tttctaaacccttgttt-cagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    ||||||||||||||||| ||||||| |||  ||||||| ||| |||| || ||||||||||||||||||    
T  25357713 tttctaaacccttgttttcagcccc-tctcactctctctcaaggtttactttgatacaaggtctatatt 25357646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 170; Significance: 4e-91; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 15 - 386
Target Start/End: Complemental strand, 52043 - 51685
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatattcaccgccaatgagatggacatcatc 114  Q
    ||||||| ||||||||||||||||||||||||||||||||||    |||||||  | |||||||||||||||||| |  |  || |      | | | ||    
T  52043 tgttgccattctaaacccttgtttcagccccctctatctctc----aaagtttagtatgatacaaggtctatatttatagtaaaagt-----ataac-tc 51954  T
Q  115 ataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaata 214  Q
    |||||||||||||||||| ||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  51953 ataaatttggaacgaataccacactgaagatacgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaata 51857  T
Q  215 tatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatattt 314  Q
    ||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||       ||||||||||||    
T  51856 tatttgcatcaaatcgttctttatacggtacaaaaatatatttattgtccataaatatattttcaccacaaaatatatttgaaacaaatcttttatattt 51757  T
Q  315 ttagcaacaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattag 386  Q
    ||||||||| |||||| | ||||||||||||||||||||||||||| |||||| |||||||||| |||||||    
T  51756 ttagcaacattattctccatccatcaaattttgagtcatactacaacattctccaccttgactctaaattag 51685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 303 - 360
Target Start/End: Complemental strand, 50218 - 50161
Alignment:
Q  303 tcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  50218 tcttttatatttttagcaacattattcttcatccatcaaattttgagtcatactacaa 50161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 243 - 282
Target Start/End: Complemental strand, 170115 - 170076
Alignment:
Q  243 tacaaaaatatatttattgtccataaatatattttcagca 282  Q
    ||||||||||||||| |||||||| |||||||||||||||    
T  170115 tacaaaaatatatttgttgtccatgaatatattttcagca 170076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 169; Significance: 2e-90; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 161 - 386
Target Start/End: Original strand, 35215983 - 35216208
Alignment:
Q  161 ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttatt 260  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  35215983 ctccttcagtgaaagaatatctgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttctttatacgatacaaaaatatatttatt 35216082  T
Q  261 gtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    |||||||||||||||||||||||||||||| ||||       |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  35216083 gtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcatccatcaaattttgagtcatactacaa 35216182  T
Q  361 aattctcaaccttgactccaaattag 386  Q
     |||||| |||||||||| |||||||    
T  35216183 cattctccaccttgactctaaattag 35216208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 15 - 360
Target Start/End: Complemental strand, 42452782 - 42452451
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatattcaccgccaatgagatggacatcatc 114  Q
    ||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||| ||||||||| |     ||| | | | | | | ||    
T  42452782 tgttgcctttctaaacccttgtttcagccccctctatctcc------aagtttgctctgatacaatgtctatatttat----aataaaa-gtataac-tc 42452695  T
Q  115 ataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaata 214  Q
    ||||||||||||| |||| ||||| |||||||| |||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  42452694 ataaatttggaacaaataccacaccgaagatacattt--tttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaata 42452597  T
Q  215 tatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatattt 314  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||    
T  42452596 tatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattt 42452497  T
Q  315 ttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||    
T  42452496 ttagcaacaatattcttcatccatcaaattttaagtcatactacaa 42452451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 15 - 360
Target Start/End: Original strand, 23452493 - 23452827
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatattcaccgccaatgagatggacatcatc 114  Q
    ||||||||||||||||||||||||||||||||||| ||||||||  |||||||   ||||||||||||||||||| |  |  || |      | | | ||    
T  23452493 tgttgcctttctaaacccttgtttcagccccctctgtctctctc--aaagtttagcctgatacaaggtctatatttatagtaaaagt-----ataac-tc 23452584  T
Q  115 ataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaata 214  Q
    ||||||||||||| |||| |||||||||| ||| |||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  23452585 ataaatttggaacaaataccacactgaaggtactttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaata 23452681  T
Q  215 tatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatattt 314  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||       ||||||||||||    
T  23452682 tatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatttattttcagcataaaatatatttgaaacaaatcttttatattt 23452781  T
Q  315 ttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    |||||||||||||||| | |||||||||||||||||||||||||||    
T  23452782 ttagcaacaatattctccatccatcaaattttgagtcatactacaa 23452827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 161 - 360
Target Start/End: Original strand, 35218364 - 35218563
Alignment:
Q  161 ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttatt 260  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  35218364 ctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgcatcaaatcgttctttatacgatacaaaaatatatttatt 35218463  T
Q  261 gtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    |||||||||||||||||||||||||||||| ||||       |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  35218464 gtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcatccatcaaattttgagtcatactacaa 35218563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 161 - 360
Target Start/End: Original strand, 42923893 - 42924092
Alignment:
Q  161 ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttatt 260  Q
    |||||||||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  42923893 ctccttcagtgaaagaatatttgcatcaaaaatataatatttcttttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttatt 42923992  T
Q  261 gtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    |||||||||||||||||||||||||||||| ||||       |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  42923993 gtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaa 42924092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 113 - 360
Target Start/End: Original strand, 27583667 - 27583905
Alignment:
Q  113 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 212  Q
    |||||||||||||||| ||||||| |||||||||| ||||        |||||||||||||||||||||||||| |||       |||||| ||||||||    
T  27583667 tcataaatttggaacggatatcacgctgaagatacatttctttttt--ctccttcagtgaaagaatatttgcatcaaa-------tattccttttcaaaa 27583757  T
Q  213 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 312  Q
    ||||||||||||||||  ||||||||| | || ||||||||||||||||| ||||||||||| ||||||||||||||| ||||       ||||||||||    
T  27583758 tatatttgcatcaaatattccttcatatggtataaaaatatatttattgttcataaatatatcttcagcacaaaatatatttgaaacaaatcttttatat 27583857  T
Q  313 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||    
T  27583858 ttttagcaacaatattcttcatccatcaaaatttgagtcatactacaa 27583905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 196 - 352
Target Start/End: Original strand, 28568584 - 28568740
Alignment:
Q  196 aatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttg 295  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||    
T  28568584 aatattccctttcaaaatatatttgcatcaaatcttccttcacacgatacaaaaatatatttattgtccataaatatattttcaaaacaaaatatatttg 28568683  T
Q  296 nnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 352  Q
           ||||||||| |||||||||||||||||||| || ||||||||||||||||    
T  28568684 aaacaaatcttttatagttttagcaacaatattcttcatctatcaaattttgagtca 28568740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 196 - 282
Target Start/End: Complemental strand, 15693755 - 15693669
Alignment:
Q  196 aatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 282  Q
    ||||| |||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  15693755 aatatcccctttaaaaatatatttgcatcaaatcttccttcatacggtacaaaaatatatttattgcccataaatatattttcagca 15693669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 232 - 360
Target Start/End: Original strand, 27136367 - 27136503
Alignment:
Q  232 ccttcatacgatacaaaaatatatttattgtccataaatatattt--------tcagcacaaaatatctttgnnnnnnntcttttatatttttagcaaca 323  Q
    |||||||||| |||||||||||||||||| |||||||||||||||        ||| |||||||||| ||||       |||||||||||||||||| ||    
T  27136367 ccttcatacggtacaaaaatatatttattttccataaatatatttatatattttcaacacaaaatatatttgaaacaaatcttttatatttttagcacca 27136466  T
Q  324 atattcttcttccatcaaattttgagtcatactacaa 360  Q
    ||||||||| |||||||||||||||||||||||||||    
T  27136467 atattcttcatccatcaaattttgagtcatactacaa 27136503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 5377685 - 5377757
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    ||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||| ||||||||||||||    
T  5377685 tgttgcctttctaaacccttgtttcagtcccctctatctctct--caaagtttgctctgaaacaaggtctatatt 5377757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 267 - 355
Target Start/End: Original strand, 34575608 - 34575696
Alignment:
Q  267 aaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatac 355  Q
    |||||||||||||||||||||||| |||        |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  34575608 aaatatattttcagcacaaaatatatttagaacaaatcttttatatttttagcaacaatattcttcatccatcaaattttgagtcatac 34575696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 196 - 281
Target Start/End: Complemental strand, 7502723 - 7502638
Alignment:
Q  196 aatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagc 281  Q
    |||||| ||||| ||||||||||||||||||||| ||  |||||| |||||||||||| |||||||| ||||||||||||||||||    
T  7502723 aatatttcctttaaaaatatatttgcatcaaatcttctgtcatacaatacaaaaatatttttattgttcataaatatattttcagc 7502638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 24162468 - 24162536
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||||    
T  24162468 tgttgcctttctaaacccttgtttcagccccctctatct------caaagtttgctctgatacaaggtctatatt 24162536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 211 - 282
Target Start/End: Complemental strand, 39287042 - 39286971
Alignment:
Q  211 aatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 282  Q
    ||||||||||||||||||| || |||||| | ||||||||||||||||||||||||||||||||||| ||||    
T  39287042 aatatatttgcatcaaatcttcattcatatggtacaaaaatatatttattgtccataaatatattttaagca 39286971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 13910300 - 13910368
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||||||||||||||||      | ||||||||||||||||||||||||||||    
T  13910300 tgttgcctttctaaacccttgtttcagccccctctatct------ccaagtttgctctgatacaaggtctatatt 13910368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 19504601 - 19504669
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||||||||||||||||      | ||||||||||||||||||||||||||||    
T  19504601 tgttgcctttctaaacccttgtttcagccccctctatct------ccaagtttgctctgatacaaggtctatatt 19504669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 40032314 - 40032382
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||||||||||||||||      |||||||| |||||||||||||||||||||    
T  40032314 tgttgcctttctaaacccttgtttcagccccctctatct------caaagtttactctgatacaaggtctatatt 40032382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 203 - 282
Target Start/End: Original strand, 41304806 - 41304884
Alignment:
Q  203 cctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 282  Q
    ||||| ||||||||||||||||||||| ||||||||| | |||||||||||||||| | |||||||||||||| ||||||    
T  41304806 cctttaaaaatatatttgcatcaaatcttccttcatatg-tacaaaaatatatttactatccataaatatattgtcagca 41304884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 161 - 257
Target Start/End: Original strand, 34575528 - 34575617
Alignment:
Q  161 ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatattt 257  Q
    |||||||||||||||||||||||||| |||       |||||||||||||||||||||||||||||||  ||||| ||| | |||||||||||||||    
T  34575528 ctccttcagtgaaagaatatttgcatcaaa-------tattccctttcaaaatatatttgcatcaaattttcctttatatggtacaaaaatatattt 34575617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 204 - 282
Target Start/End: Original strand, 41303457 - 41303535
Alignment:
Q  204 ctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 282  Q
    |||| |||||||||||| ||||| || ||||||| ||| ||||||| |||||||| |||||||||||||||||||||||    
T  41303457 ctttaaaaatatatttgaatcaattcttccttcacacggtacaaaattatatttactgtccataaatatattttcagca 41303535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 27104798 - 27104730
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||| ||||||||||||||||||||||||||      |||||||| |||||||||||||||||||||    
T  27104798 tgttgcctttctgaacccttgtttcagccccctctatct------caaagttttctctgatacaaggtctatatt 27104730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 42064514 - 42064446
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||||| ||||||||||      | ||||||||||||||||||||||||||||    
T  42064514 tgttgcctttctaaacccttgtttcagctccctctatct------ccaagtttgctctgatacaaggtctatatt 42064446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 21520949 - 21521019
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    ||||||||||||||||||||||||||||||| |||||||||    ||||||||  ||||||||||||| ||||||    
T  21520949 tgttgcctttctaaacccttgtttcagccccatctatctct----caaagtttagtctgatacaaggtttatatt 21521019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 303 - 352
Target Start/End: Complemental strand, 28568395 - 28568346
Alignment:
Q  303 tcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 352  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  28568395 tcttttatatttttaacaacaatattcttcatccatcaaattttgagtca 28568346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 35215842 - 35215920
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgc----aaagtttgctctgatacaaggtctatatt 89  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |    |||||||   |||||||||||||||||||    
T  35215842 tgttgcttttctaaacccttgtttcagccccctctatctctctctctctcaaagtttagcctgatacaaggtctatatt 35215920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 38020201 - 38020161
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctct 55  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  38020201 tgttgcctttctaaacccttgtttcagccccctctatctct 38020161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 22 - 89
Target Start/End: Original strand, 45280248 - 45280309
Alignment:
Q  22 tttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    ||||||||||||||||||||||||||||||||      ||||||||||||||||||||||| ||||||    
T  45280248 tttctaaacccttgtttcagccccctctatct------caaagtttgctctgatacaaggtatatatt 45280309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 6264401 - 6264469
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    ||||||||||||||||| |||||||||||||||||||||      ||||||||  ||||||||||||||||||||    
T  6264401 tgttgcctttctaaacctttgtttcagccccctctatct------caaagtttagtctgatacaaggtctatatt 6264469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 19007639 - 19007600
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  19007639 tgttgcctttctaaacccttgtttcagccccctctatctc 19007600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 19502267 - 19502335
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||| |||||||||||||||| |||||      | ||||||||||||||||||||||||||||    
T  19502267 tgttgcctttctaaactcttgtttcagccccctttatct------ccaagtttgctctgatacaaggtctatatt 19502335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 31733021 - 31733060
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  31733021 tgttgcctttctaaacccttgtttcagccccctctatctc 31733060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 35218219 - 35218262
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctc 58  Q
    |||||| |||||||||||||||||||||||||||||||||||||    
T  35218219 tgttgcttttctaaacccttgtttcagccccctctatctctctc 35218262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 22163203 - 22163242
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  22163203 tgttgcctttctaaatccttgtttcagccccctctatctc 22163242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 22287592 - 22287631
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  22287592 tgttgcctttctaaacccttgtttcagccccctatatctc 22287631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 22407665 - 22407733
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||||| |||| |||||      || ||||| |||||||||||||||||||||    
T  22407665 tgttgcctttctaaacccttgtttcagcaccctatatct------cacagtttactctgatacaaggtctatatt 22407733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 28196636 - 28196597
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  28196636 tgttgcctttctaaacctttgtttcagccccctctatctc 28196597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 306 - 352
Target Start/End: Complemental strand, 15693629 - 15693583
Alignment:
Q  306 tttatatttttagcaacaatattcttcttccatcaaattttgagtca 352  Q
    ||||||||||||||||||||||| ||| ||||||||||||| |||||    
T  15693629 tttatatttttagcaacaatattattcatccatcaaattttaagtca 15693583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 54
Target Start/End: Complemental strand, 17849110 - 17849077
Alignment:
Q  21 ctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||||    
T  17849110 ctttctaaacccttgtttcagccccctctatctc 17849077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 56
Target Start/End: Original strand, 42923765 - 42923806
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctc 56  Q
    ||||||| ||||||||||||||||||||| ||||||||||||    
T  42923765 tgttgccattctaaacccttgtttcagcctcctctatctctc 42923806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 54
Target Start/End: Complemental strand, 22874134 - 22874102
Alignment:
Q  22 tttctaaacccttgtttcagccccctctatctc 54  Q
    |||||||||||||||||||||||||||||||||    
T  22874134 tttctaaacccttgtttcagccccctctatctc 22874102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 54
Target Start/End: Original strand, 37963190 - 37963222
Alignment:
Q  22 tttctaaacccttgtttcagccccctctatctc 54  Q
    |||||||||||||||||||||||||||||||||    
T  37963190 tttctaaacccttgtttcagccccctctatctc 37963222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 86
Target Start/End: Original strand, 43623824 - 43623889
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctat 86  Q
    ||||||||||||||||| |||||||| ||||||||||||| |      ||||| ||||||||||||||||||    
T  43623824 tgttgcctttctaaaccattgtttcacccccctctatctccc------agtttactctgatacaaggtctat 43623889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 11739816 - 11739855
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||| ||||||||||||||||| ||||||||||||||||    
T  11739816 tgttgtctttctaaacccttgttccagccccctctatctc 11739855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 34979835 - 34979874
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    |||| ||||||||||| |||||||||||||||||||||||    
T  34979835 tgttacctttctaaacgcttgtttcagccccctctatctc 34979874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 38020142 - 38020103
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||| || |||||||||||||    
T  38020142 tgttgcctttctaaacccttgttccaaccccctctatctc 38020103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 303 - 352
Target Start/End: Original strand, 41303573 - 41303623
Alignment:
Q  303 tcttttatatttt-tagcaacaatattcttcttccatcaaattttgagtca 352  Q
    ||||||||||||| |||||||||| |||||| ||||||||||| |||||||    
T  41303573 tcttttatattttttagcaacaatcttcttcatccatcaaattctgagtca 41303623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 45239238 - 45239275
Alignment:
Q  21 ctttctaaacccttgtttcagccccctctatctctctc 58  Q
    ||||||||| | ||||||||||||||||||||||||||    
T  45239238 ctttctaaatcattgtttcagccccctctatctctctc 45239275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 54
Target Start/End: Original strand, 18800565 - 18800597
Alignment:
Q  22 tttctaaacccttgtttcagccccctctatctc 54  Q
    |||||||||||||||||||||||||| ||||||    
T  18800565 tttctaaacccttgtttcagccccctatatctc 18800597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 159; Significance: 1e-84; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 113 - 360
Target Start/End: Original strand, 11815 - 12059
Alignment:
Q  113 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 212  Q
    |||||||||||||||||||| ||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  11815 tcataaatttggaacgaataccacactgaagatacgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 11911  T
Q  213 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 312  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||       | ||||||||    
T  11912 tatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaattttttatat 12011  T
Q  313 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    |||||||||||||||||| | ||||||||||||||| |||||||||||    
T  12012 ttttagcaacaatattctccatccatcaaattttgaatcatactacaa 12059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 143; Significance: 5e-75; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 113 - 360
Target Start/End: Complemental strand, 79131 - 78885
Alignment:
Q  113 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 212  Q
    |||||||||||||||||||| |||||||||||||| |||         |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  79131 tcataaatttggaacgaataccacactgaagatacattt-tttttttcctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 79033  T
Q  213 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 312  Q
    ||||||||||||||||||| ||||||||  |||||||||||||||||| |||||||||||||||| |||| ||||||| ||||       ||||||||||    
T  79032 tatatttgcatcaaatcgttcttcatacagtacaaaaatatatttattatccataaatatatttttagcagaaaatatatttgagacaaatcttttatat 78933  T
Q  313 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 360  Q
    |||||||||||||||||| | ||||||||||||| |||||||||||||    
T  78932 ttttagcaacaatattctccatccatcaaattttaagtcatactacaa 78885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 79217 - 79178
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  79217 tgttgcctttctaaacccttgttttagccccctctatctc 79178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 89; Significance: 8e-43; HSPs: 2)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 214 - 367
Target Start/End: Complemental strand, 4694 - 4541
Alignment:
Q  214 atatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatt 313  Q
    ||||||||||||||| |||||||||||  ||||||||||||| ||||||||||||||||||||||||||| |||||| || |       |||||||||||    
T  4694 atatttgcatcaaattgtccttcatacagtacaaaaatatatatattgtccataaatatattttcagcacgaaatatattcgaaacaaatcttttatatt 4595  T
Q  314 tttagcaacaatattcttcttccatcaaattttgagtcatactacaaaattctc 367  Q
    ||||||||||||||||||| ||||||||||||||||| ||||| ||| ||||||    
T  4594 tttagcaacaatattcttcatccatcaaattttgagttatactgcaacattctc 4541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 113 - 152
Target Start/End: Complemental strand, 4761 - 4722
Alignment:
Q  113 tcataaatttggaacgaatatcacactgaagatacgtttc 152  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  4761 tcataaatttgaaacgaatatcacactgaagatacgtttc 4722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468 (Bit Score: 81; Significance: 5e-38; HSPs: 3)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 247 - 360
Target Start/End: Original strand, 2070 - 2183
Alignment:
Q  247 aaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaatttt 346  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||       |||||||||||||||||||||||||||| | |||||||||||||    
T  2070 aaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatttt 2169  T
Q  347 gagtcatactacaa 360  Q
    ||||||||||||||    
T  2170 gagtcatactacaa 2183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 2022 - 2080
Alignment:
Q  161 ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatattt 219  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  2022 ctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatattt 2080  T

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Target: scaffold0468; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 1895 - 1927
Alignment:
Q  23 ttctaaacccttgtttcagccccctctatctct 55  Q
    ||||||||||||||||||||| |||||||||||    
T  1895 ttctaaacccttgtttcagccacctctatctct 1927  T

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Target: scaffold1674 (Bit Score: 74; Significance: 7e-34; HSPs: 1)
Name: scaffold1674
Description:

Target: scaffold1674; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 268 - 386
Target Start/End: Original strand, 1 - 119
Alignment:
Q  268 aatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaaaattctc 367  Q
    ||||||||||||||||||||||| ||||       |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||    
T  1 aatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaacattctc 100  T
Q  368 aaccttgactccaaattag 386  Q
     |||||||||| |||||||    
T  101 caccttgactctaaattag 119  T

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Target: scaffold0025 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 69547 - 69619
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||    
T  69547 tgttgcctttctaaacccttgtttcagccccctctatctctct--caaagtttgctctgatataaggtctatatt 69619  T

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Target: scaffold0025; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 73279 - 73351
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||||| || ||||||| ||||||||||    
T  73279 tgttgcctttctaaacccttgtttcagccccctctatctctct--caaagtttcctttgatacacggtctatatt 73351  T

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Target: scaffold0038 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 41739 - 41807
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||    
T  41739 tgttgcctttctaaacccttgtttcagccccctctatctct------aagtttgctctgatacaaggtctatatt 41807  T

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Target: scaffold0552 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0552
Description:

Target: scaffold0552; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 1087 - 1155
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    ||||||||||||||||||||||||||||||| |||||||      ||||||||||||||||||||||||||||||    
T  1087 tgttgcctttctaaacccttgtttcagccccttctatct------caaagtttgctctgatacaaggtctatatt 1155  T

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Target: scaffold0250 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 2912 - 2844
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||||||||||||||||      ||||||||||||||||||||| ||||||||    
T  2912 tgttgcctttctaaacccttgtttcagccccctctatct------caaagtttgctctgatacaagttctatatt 2844  T

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Target: scaffold0267 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 15 - 86
Target Start/End: Complemental strand, 73 - 1
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaag-tttgctctgatacaaggtctat 86  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |||||   | ||||||||||||||||||    
T  73 tgttgcttttctaaacccttgtttcagccccctctatctctctctcaaagaaatactctgatacaaggtctat 1  T

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Target: scaffold0472 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 6231 - 6163
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||| ||||||||||||||||||||||||||||||||      ||||||||||| ||||||||||||||||||    
T  6231 tgttgcttttctaaacccttgtttcagccccctctatct------caaagtttgctttgatacaaggtctatatt 6163  T

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Target: scaffold0339 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 4029 - 3961
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||||||||||||||||||||||||||||||||      ||||||||  ||||||||||||||||||||    
T  4029 tgttgcctttctaaacccttgtttcagccccctctatct------caaagtttagtctgatacaaggtctatatt 3961  T

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Target: scaffold0131 (Bit Score: 44; Significance: 6e-16; HSPs: 2)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 15051 - 14983
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    ||||||||||||||| | |||||||||||||||||||||      ||||||||||||||||||||||||||||||    
T  15051 tgttgcctttctaaatcattgtttcagccccctctatct------caaagtttgctctgatacaaggtctatatt 14983  T

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Target: scaffold0131; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 14638 - 14707
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatat 88  Q
    ||||| ||||||||||| |||||||| ||||||||||||||    ||||||||||||| | |||||||||||||    
T  14638 tgttgtctttctaaaccattgtttcatccccctctatctct----caaagtttgctctaaaacaaggtctatat 14707  T

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Target: scaffold0008 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 279
Target Start/End: Original strand, 57836 - 57905
Alignment:
Q  209 aaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttca 279  Q
    ||||||||||||||||||||  || |||||||| |||||||||||||||||||| |||| |||||||||||    
T  57836 aaaatatatttgcatcaaattttc-ttcatacggtacaaaaatatatttattgttcatacatatattttca 57905  T

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Target: scaffold0068 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 29203 - 29125
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgc----aaagtttgctctgatacaaggtctatatt 89  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |    |||||||   |||||||||||||||||||    
T  29203 tgttgcctttttaaacccttgtttcagccccctctatctctctctctctcaaagtttagcctgatacaaggtctatatt 29125  T

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Target: scaffold0004 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 79891 - 79852
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  79891 tgttgtctttctaaacccttgtttcagccccctctatctc 79852  T

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Target: scaffold0533 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 211 - 258
Target Start/End: Original strand, 1971 - 2018
Alignment:
Q  211 aatatatttgcatcaaatcgtccttcatacgatacaaaaatatattta 258  Q
    |||||||||| |||||||  ||||||||| ||||||||||||||||||    
T  1971 aatatatttgtatcaaatattccttcatatgatacaaaaatatattta 2018  T

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Target: scaffold0474 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0474
Description:

Target: scaffold0474; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 352
Target Start/End: Complemental strand, 10492 - 10443
Alignment:
Q  303 tcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 352  Q
    ||||||||||||||| ||||||| || ||  |||||||||||||||||||    
T  10492 tcttttatatttttaacaacaatcttttttatccatcaaattttgagtca 10443  T

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