View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1740_high_121 (Length: 265)
Name: NF1740_high_121
Description: NF1740
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1740_high_121 |
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Alignment Details
Target: chr8 (Bit Score: 154; Significance: 9e-82; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 5094531 - 5094345
Alignment:
| Q |
1 |
ataaaaatcgtatactcccttacatttctaataaattttagagcttcaatttaatcaaactaattgtttaatgatatataaataaattatttttctaatt |
100 |
Q |
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| T |
5094531 |
ataaaaatcgtatactcccttacatttctaataaattttagaacttcaatttaatcaaactaattgtttaatgatatataaataaattatttttctaatt |
5094432 |
T |
|
| Q |
101 |
attcttcatagttaagttaacgtggtatctgcagaatatatcaaaatattgaaaggcaaatacaattcttgattcttatatgctaccaacatatttt |
197 |
Q |
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||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
5094431 |
attcttcatagttaagttaacgtggtatctg----------caaaatattgaaaggcaaatacaattcttgattcttatatgctaccaacatttttt |
5094345 |
T |
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