View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1740_high_127 (Length: 255)
Name: NF1740_high_127
Description: NF1740
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1740_high_127 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 15 - 255
Target Start/End: Original strand, 45953696 - 45953936
Alignment:
| Q |
15 |
aaaaaccactcttcaacagggttgtaattcaatgggccatagatataaactggccttatagaagtccaattaacatcctttgattgcagcaaactttctg |
114 |
Q |
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| T |
45953696 |
aaaaaccactcttcaacagggttgtaattcaaggggccatagatataaactggccttatagaagtccaattaacatcctttgattgcagcaaactttctg |
45953795 |
T |
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| Q |
115 |
tttcaagctttcccttgtgcctgctcttagggtcaactgcatcaatctatcaacgagaaccagagttaaaatataaacaaaactaataaaggtgacagaa |
214 |
Q |
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| T |
45953796 |
tttcaagctttcccttgtgcctgctcttagggtcaactgcatcaatctatcaacgagaaccagagttaaaatataaacaaaactaataaaggtgacagaa |
45953895 |
T |
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| Q |
215 |
ttctagaaagaaacatttataaaagtgacataattctagta |
255 |
Q |
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| T |
45953896 |
ttctagaaagaaacatttataaaagtgacataattatagta |
45953936 |
T |
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