View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1740_high_167 (Length: 220)
Name: NF1740_high_167
Description: NF1740
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1740_high_167 |
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Alignment Details
Target: chr7 (Bit Score: 183; Significance: 4e-99; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 20 - 202
Target Start/End: Complemental strand, 5881446 - 5881264
Alignment:
| Q |
20 |
atccccattcaatctcacacacttcgctctttctcttcaaccccccttcgtttcaacaccaattactccaaattcctcataaaccctaatttccgccatt |
119 |
Q |
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| T |
5881446 |
atccccattcaatctcacacacttcgctctttctcttcaaccccccttcgtttcaacaccaattactccaaattcctcataaaccctaatttccgccatt |
5881347 |
T |
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| Q |
120 |
tctcttccgaaccagttatcccacaacccaatcccgatcacatcgtcatcgttgatttattctcgaaatccatagatcttaat |
202 |
Q |
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| T |
5881346 |
tctcttccgaaccagttatcccacaacccaatcccgatcacatcgtcatcgttgatttattctcgaaatccatagatcttaat |
5881264 |
T |
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