View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1740_low_135 (Length: 255)
Name: NF1740_low_135
Description: NF1740
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1740_low_135 |
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Alignment Details
Target: chr8 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 43364927 - 43365175
Alignment:
| Q |
1 |
agaccatcaaacaatatattgaataaataactgtatttgtaattcaaccacnnnnnnnnataagcattgtaattcaatcactctacgctgttctagcatt |
100 |
Q |
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| T |
43364927 |
agaccatcaaacaatatattgaataaataactgtatttgtaattcaaccacttttttttataagcattgtaattcaatcactctacgctgttctagcatt |
43365026 |
T |
|
| Q |
101 |
tgttacaagcatcatagctagagtcattattacattttctacaaaatcgaatttggatgtgatgcattctcaatattttttcttcatatggacattccaa |
200 |
Q |
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||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43365027 |
tgttacaagcatcatcgctagagtcattattacattttctacaaaatcgaatttggatgtgatgcattctcaatattttttcttcatatggacattccaa |
43365126 |
T |
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| Q |
201 |
ttctttggcagaggtttgatacagatcttacaagattgctgtgatgatg |
249 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43365127 |
ttctttggcagaggtttgatacagatcttacaagattgctgtgatgatg |
43365175 |
T |
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