View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1740_low_39 (Length: 464)

Name: NF1740_low_39
Description: NF1740
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1740_low_39
NF1740_low_39
[»] chr5 (26 HSPs)
chr5 (1-191)||(547633-547823)
chr5 (284-443)||(7389803-7389963)
chr5 (284-443)||(28525642-28525801)
chr5 (284-443)||(12686435-12686596)
chr5 (284-443)||(12692537-12692698)
chr5 (284-443)||(28531738-28531897)
chr5 (284-443)||(32097278-32097440)
chr5 (285-443)||(41297024-41297186)
chr5 (284-443)||(32094477-32094639)
chr5 (299-443)||(19066368-19066512)
chr5 (285-440)||(14609915-14610069)
chr5 (299-440)||(19060030-19060171)
chr5 (285-440)||(20499883-20500039)
chr5 (287-443)||(30384642-30384796)
chr5 (284-443)||(30772024-30772185)
chr5 (325-440)||(33849128-33849242)
chr5 (299-440)||(33753494-33753634)
chr5 (189-226)||(41296928-41296965)
chr5 (365-443)||(26509675-26509751)
chr5 (188-226)||(32094695-32094733)
chr5 (189-226)||(7390021-7390058)
chr5 (189-226)||(12686652-12686689)
chr5 (189-226)||(12692754-12692791)
chr5 (189-226)||(28525859-28525896)
chr5 (189-226)||(28531955-28531992)
chr5 (190-226)||(25408438-25408474)
[»] chr3 (46 HSPs)
chr3 (284-443)||(8331531-8331690)
chr3 (284-443)||(38449319-38449479)
chr3 (284-443)||(38455806-38455966)
chr3 (284-443)||(10769225-10769385)
chr3 (284-443)||(49151356-49151515)
chr3 (284-443)||(49157423-49157582)
chr3 (284-443)||(11839981-11840143)
chr3 (284-443)||(30051358-30051516)
chr3 (284-443)||(42191476-42191638)
chr3 (284-443)||(42197418-42197580)
chr3 (284-440)||(10238471-10238630)
chr3 (284-440)||(10244593-10244752)
chr3 (284-443)||(10760906-10761066)
chr3 (284-443)||(17056049-17056209)
chr3 (299-443)||(26429673-26429818)
chr3 (284-437)||(28964624-28964777)
chr3 (284-443)||(55003665-55003819)
chr3 (288-443)||(48128296-48128451)
chr3 (284-443)||(46656424-46656577)
chr3 (323-440)||(13444840-13444958)
chr3 (307-429)||(53069319-53069443)
chr3 (303-423)||(13367114-13367233)
chr3 (284-337)||(23138779-23138832)
chr3 (303-423)||(9760481-9760600)
chr3 (400-443)||(13837534-13837577)
chr3 (307-441)||(2982483-2982616)
chr3 (284-351)||(17601882-17601951)
chr3 (284-336)||(11846340-11846392)
chr3 (189-226)||(8331436-8331473)
chr3 (189-226)||(10761124-10761161)
chr3 (189-226)||(10769443-10769480)
chr3 (189-226)||(30051574-30051611)
chr3 (190-226)||(53071725-53071761)
chr3 (189-222)||(9586490-9586523)
chr3 (189-226)||(11840199-11840236)
chr3 (285-443)||(12108927-12109082)
chr3 (189-226)||(17056265-17056302)
chr3 (189-226)||(23138890-23138927)
chr3 (189-226)||(26429891-26429928)
chr3 (189-226)||(28964529-28964566)
chr3 (189-226)||(38449537-38449574)
chr3 (189-226)||(42191694-42191731)
chr3 (189-226)||(42197636-42197673)
chr3 (189-226)||(49151261-49151298)
chr3 (189-226)||(49157328-49157365)
chr3 (190-226)||(24643964-24644000)
[»] chr8 (29 HSPs)
chr8 (284-443)||(5542416-5542576)
chr8 (284-443)||(36818714-36818875)
chr8 (284-443)||(22219983-22220143)
chr8 (284-443)||(32890630-32890792)
chr8 (284-443)||(32896754-32896916)
chr8 (284-443)||(42033541-42033704)
chr8 (284-443)||(10699773-10699933)
chr8 (285-443)||(9935026-9935182)
chr8 (284-443)||(42993259-42993417)
chr8 (284-443)||(10705582-10705741)
chr8 (284-440)||(39735807-39735954)
chr8 (365-440)||(14417766-14417841)
chr8 (371-443)||(1883075-1883147)
chr8 (299-357)||(1883185-1883243)
chr8 (365-443)||(39727564-39727643)
chr8 (285-341)||(39727643-39727699)
chr8 (284-341)||(14417705-14417762)
chr8 (284-430)||(17954250-17954393)
chr8 (395-429)||(1171215-1171249)
chr8 (189-226)||(10705487-10705524)
chr8 (189-226)||(32890537-32890574)
chr8 (189-226)||(32896661-32896698)
chr8 (189-226)||(36818621-36818658)
chr8 (189-226)||(39727758-39727795)
chr8 (189-226)||(39736012-39736049)
chr8 (189-226)||(42033446-42033483)
chr8 (190-226)||(10699679-10699715)
chr8 (190-226)||(14417611-14417647)
chr8 (190-226)||(42993473-42993509)
[»] chr2 (33 HSPs)
chr2 (284-443)||(28683201-28683360)
chr2 (284-443)||(44717061-44717221)
chr2 (284-443)||(13455841-13456003)
chr2 (284-443)||(13461782-13461944)
chr2 (284-443)||(35084935-35085097)
chr2 (299-443)||(35090908-35091053)
chr2 (284-443)||(31002120-31002280)
chr2 (284-443)||(11048807-11048970)
chr2 (284-440)||(31008098-31008255)
chr2 (284-441)||(36750156-36750316)
chr2 (284-443)||(30965071-30965231)
chr2 (303-443)||(23343318-23343457)
chr2 (284-443)||(13149940-13150105)
chr2 (285-443)||(19879339-19879502)
chr2 (284-399)||(35439671-35439786)
chr2 (284-345)||(35442187-35442248)
chr2 (390-443)||(35438961-35439014)
chr2 (303-379)||(23284708-23284784)
chr2 (299-379)||(7771508-7771586)
chr2 (285-432)||(31651376-31651517)
chr2 (299-379)||(28765341-28765421)
chr2 (189-226)||(13455748-13455785)
chr2 (189-226)||(13461689-13461726)
chr2 (189-226)||(19879243-19879280)
chr2 (189-226)||(30964976-30965013)
chr2 (189-226)||(31002025-31002062)
chr2 (189-226)||(31008003-31008040)
chr2 (189-226)||(35085153-35085190)
chr2 (189-226)||(35091126-35091163)
chr2 (189-226)||(36750063-36750100)
chr2 (189-226)||(44717279-44717316)
chr2 (190-226)||(28683418-28683454)
chr2 (298-350)||(29832969-29833021)
[»] chr4 (29 HSPs)
chr4 (284-443)||(10733608-10733765)
chr4 (284-443)||(10739595-10739752)
chr4 (284-443)||(10947377-10947534)
chr4 (284-443)||(10953364-10953521)
chr4 (284-443)||(48166922-48167082)
chr4 (284-443)||(26957059-26957219)
chr4 (284-443)||(48160703-48160863)
chr4 (285-443)||(6257461-6257619)
chr4 (284-443)||(24287729-24287890)
chr4 (284-443)||(50168339-50168498)
chr4 (284-430)||(26971824-26971970)
chr4 (304-443)||(33461648-33461787)
chr4 (304-443)||(33458523-33458662)
chr4 (284-440)||(44831878-44832030)
chr4 (330-441)||(49976382-49976488)
chr4 (301-443)||(50155719-50155862)
chr4 (288-440)||(17627039-17627186)
chr4 (301-440)||(35177557-35177697)
chr4 (353-441)||(4632194-4632283)
chr4 (285-439)||(19686581-19686732)
chr4 (286-422)||(9237128-9237262)
chr4 (189-226)||(6257678-6257715)
chr4 (189-226)||(10733823-10733860)
chr4 (189-226)||(10739810-10739847)
chr4 (189-226)||(10947592-10947629)
chr4 (189-226)||(10953579-10953616)
chr4 (299-348)||(28704291-28704340)
chr4 (189-226)||(48160608-48160645)
chr4 (189-226)||(48166827-48166864)
[»] chr7 (32 HSPs)
chr7 (284-443)||(3811425-3811584)
chr7 (284-443)||(3817567-3817726)
chr7 (284-443)||(28421215-28421376)
chr7 (284-443)||(351531-351690)
chr7 (284-443)||(339125-339283)
chr7 (284-443)||(35148265-35148424)
chr7 (284-443)||(22742185-22742345)
chr7 (288-440)||(26383417-26383569)
chr7 (284-443)||(5849274-5849433)
chr7 (285-443)||(43539722-43539883)
chr7 (324-440)||(15843730-15843847)
chr7 (324-440)||(15860839-15860956)
chr7 (304-440)||(5979433-5979571)
chr7 (284-379)||(35152849-35152944)
chr7 (353-443)||(20238763-20238854)
chr7 (284-387)||(7608171-7608274)
chr7 (375-443)||(35150797-35150865)
chr7 (284-399)||(42767505-42767618)
chr7 (285-443)||(26380837-26380987)
chr7 (288-429)||(18656923-18657062)
chr7 (189-226)||(26380757-26380794)
chr7 (189-226)||(26383318-26383355)
chr7 (190-226)||(5849180-5849216)
chr7 (190-226)||(35153002-35153038)
chr7 (189-226)||(339030-339067)
chr7 (189-226)||(351436-351473)
chr7 (391-440)||(3677876-3677925)
chr7 (189-226)||(3811642-3811679)
chr7 (353-386)||(15843693-15843726)
chr7 (353-386)||(15860802-15860835)
chr7 (189-226)||(28421432-28421469)
chr7 (189-226)||(35148482-35148519)
[»] chr6 (21 HSPs)
chr6 (284-443)||(8651059-8651219)
chr6 (284-443)||(21783580-21783741)
chr6 (284-443)||(21789803-21789964)
chr6 (284-443)||(4580577-4580739)
chr6 (284-443)||(21770823-21770980)
chr6 (284-443)||(31756476-31756634)
chr6 (284-443)||(25353953-25354115)
chr6 (284-441)||(21197288-21197456)
chr6 (284-443)||(25343367-25343528)
chr6 (284-432)||(21191136-21191285)
chr6 (288-440)||(17581384-17581533)
chr6 (284-440)||(30905841-30905996)
chr6 (303-423)||(28728047-28728166)
chr6 (288-433)||(1106062-1106206)
chr6 (299-350)||(12801889-12801940)
chr6 (314-350)||(12801645-12801681)
chr6 (189-224)||(25343276-25343311)
chr6 (189-226)||(4580795-4580832)
chr6 (189-226)||(8651277-8651314)
chr6 (189-226)||(21771038-21771075)
chr6 (189-226)||(25353862-25353899)
[»] chr1 (26 HSPs)
chr1 (284-443)||(25387760-25387920)
chr1 (284-443)||(31051288-31051448)
chr1 (288-443)||(44409748-44409904)
chr1 (284-443)||(1077986-1078148)
chr1 (284-443)||(34739730-34739889)
chr1 (284-443)||(31057788-31057948)
chr1 (284-443)||(25381791-25381953)
chr1 (284-443)||(8093102-8093261)
chr1 (284-435)||(50305939-50306092)
chr1 (287-443)||(24927017-24927172)
chr1 (306-443)||(38152220-38152356)
chr1 (287-440)||(24963968-24964120)
chr1 (284-443)||(27954905-27955063)
chr1 (284-350)||(12183961-12184029)
chr1 (188-226)||(4280203-4280241)
chr1 (300-417)||(33458192-33458308)
chr1 (189-226)||(1077893-1077930)
chr1 (189-226)||(25275520-25275557)
chr1 (189-226)||(25382009-25382046)
chr1 (189-226)||(31051193-31051230)
chr1 (189-226)||(31057693-31057730)
chr1 (189-226)||(50305846-50305883)
chr1 (284-325)||(25275421-25275464)
chr1 (190-226)||(25387976-25388012)
chr1 (190-226)||(33458383-33458419)
chr1 (190-226)||(38152431-38152467)
[»] scaffold0208 (3 HSPs)
scaffold0208 (284-443)||(6264-6426)
scaffold0208 (284-443)||(12137-12299)
scaffold0208 (189-226)||(12044-12081)
[»] scaffold0012 (1 HSPs)
scaffold0012 (284-443)||(173146-173305)
[»] scaffold1114 (2 HSPs)
scaffold1114 (286-426)||(809-949)
scaffold1114 (406-441)||(950-985)
[»] scaffold0440 (2 HSPs)
scaffold0440 (284-440)||(1453-1603)
scaffold0440 (189-226)||(1661-1698)
[»] scaffold0064 (1 HSPs)
scaffold0064 (284-387)||(14017-14120)
[»] scaffold0363 (3 HSPs)
scaffold0363 (365-440)||(878-953)
scaffold0363 (284-341)||(957-1014)
scaffold0363 (190-226)||(1072-1108)
[»] scaffold0185 (2 HSPs)
scaffold0185 (284-386)||(5711-5814)
scaffold0185 (190-226)||(5617-5653)
[»] scaffold0085 (1 HSPs)
scaffold0085 (285-443)||(38171-38330)


Alignment Details
Target: chr5 (Bit Score: 148; Significance: 6e-78; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 547633 - 547823
Alignment:
Q  1 aaaaatagcaaacaatcaataatgtatgaaaatgtgatacgcatcttaatcatcaactacttcctctggaccgatacaagtagataagtcacatctttcc 100  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  547633 aaaaatagcaaacaatcaacaatgtatgaaaatgtgatatgcatcttaatcatcaactacttcctctggactgatacaagtagataagtcacatctttcc 547732  T
Q  101 catgaacatatgagtgtcttcttgcagtcca-acgatgccaataaatgggaacattccaacgatgccttgcttttacgtaaactttctacta 191  Q
    ||||||||||||||||||||||||||||| |   |||  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  547733 catgaacatatgagtgtcttcttgcagtcaaggtgat-tcaataaatgggaacattccaacgatgccttgcttttacgtaaactttctacta 547823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 284 - 443
Target Start/End: Complemental strand, 7389963 - 7389803
Alignment:
Q  284 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaat 383  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||| |||||| ||||||    
T  7389963 gttgatatggacttaatgagtggatgttcggatgacccattaacggaataatgggaaactctaatggccatccaatataaaagaggctatggttcccaat 7389864  T
Q  384 acactgtacacggc-aaactctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    | |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  7389863 atactgtacacggcaaaactctctcttctccccatctgaagagaacttgaggcataaaggt 7389803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 284 - 443
Target Start/End: Complemental strand, 28525801 - 28525642
Alignment:
Q  284 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaat 383  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||    
T  28525801 gttgatatggactcaatgagtggatgtccggatggcccattaacggaataatgggaaaccctaatggccatccaatataaaagaggctatggtccccaat 28525702  T
Q  384 acactgtacacggcaaactctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    | || ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  28525701 ataccgtacatggcaaactctctcttctccccatctgaagagaacgtgaggcataaaggt 28525642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 284 - 443
Target Start/End: Complemental strand, 12686596 - 12686435
Alignment:
Q  284 gttgatatggacttaa--tgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtcccca 381  Q
    ||||||||||||| ||  |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||| ||||| |||||||||||    
T  12686596 gttgatatggactcaacatgagtggatgtccggatggcccattaacggaataatgggaaaccctaatggccatcaaatataaaagaggctatggtcccca 12686497  T
Q  382 atacactgtacacggcaaactctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12686496 atacaccgtacacggcaaactctctcttctccccatctgaagagaacttgaggcataaaggt 12686435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 284 - 443
Target Start/End: Complemental strand, 12692698 - 12692537
Alignment:
Q  284 gttgatatggacttaa--tgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtcccca 381  Q
    ||||||||||||| ||  |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||| ||||| |||||||||||    
T  12692698 gttgatatggactcaacatgagtggatgtccggatggcccattaacggaataatgggaaaccctaatggccatcaaatataaaagaggctatggtcccca 12692599  T
Q  382 atacactgtacacggcaaactctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12692598 atacaccgtacacggcaaactctctcttctccccatctgaagagaacttgaggcataaaggt 12692537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 284 - 443
Target Start/End: Complemental strand, 28531897 - 28531738
Alignment:
Q  284 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaat 383  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||| |||||    
T  28531897 gttgatatggactcaatgagtggatgtccggatggcccattaacggaataatgggaaaccctaatggccatccaatataaaagaggctatggtctccaat 28531798  T
Q  384 acactgtacacggcaaactctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    | || ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  28531797 ataccgtacatggcaaactctctcttctccccatctgaagagaacgtgaggcataaaggt 28531738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 284 - 443
Target Start/End: Complemental strand, 32097440 - 32097278
Alignment:
Q  284 gttgatatggacttaa--tgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtcccca 381  Q
    ||||||||||||| ||  |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||    
T  32097440 gttgatatggactcaacatgagtggatgtccggatggcccattaacggaataatgggaaaccctaatggccatccaatataaaagaggctatggtcccca 32097341  T
Q  382 atacactgtacacggcaa-actctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    |||||| |||||||| || ||||||| ||||||||||||||||||||||||||||||||||||    
T  32097340 atacaccgtacacggaaatactctctattctccccatctgaagagaacttgaggcataaaggt 32097278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 285 - 443
Target Start/End: Original strand, 41297024 - 41297186
Alignment:
Q  285 ttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaata 384  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||| ||||| ||||||||||||||    
T  41297024 ttgatatggactcaatgagtggatgtccggatgacccattaacagaataatgggaaaccctaatggtcatccaatataaaagaggctatggtccccaata 41297123  T
Q  385 cactgtacacggcaa-actctctcttctccccatctgaagaga---acttgaggcataaaggt 443  Q
    ||| ||||||| ||| |||||||||||||||||||||||||||   |||||||||||||||||    
T  41297124 caccgtacacgacaatactctctcttctccccatctgaagagaactacttgaggcataaaggt 41297186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 284 - 443
Target Start/End: Complemental strand, 32094639 - 32094477
Alignment:
Q  284 gttgatatggacttaa--tgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtcccca 381  Q
    ||||||||||||| ||  |||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||| ||||| ||||||||| |    
T  32094639 gttgatatggactcaacatgagtgtatgtccggatggcccattaacggaataatgggaaaccctaatggccatctaatataaaagaggctatggtcccaa 32094540  T
Q  382 atacactgtacacggcaa-actctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    |||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  32094539 atacaccgtacacgacaatactctctcttctccccatctgaagagaacttgaggcataaaggt 32094477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 299 - 443
Target Start/End: Complemental strand, 19066512 - 19066368
Alignment:
Q  299 atgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaatacactgtacacggca 398  Q
    ||||||||||||| |||||||||||||||| |||||||| ||||||||||| | ||||||||||| | ||||| ||||||||||||||| | ||||| ||    
T  19066512 atgagtggatgtctggatgacccattaacgaaataatggaaaaccctaatgaccatccaatataaaataggttgtggtccccaatacaccggacacgaca 19066413  T
Q  399 aactctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  19066412 aactctctcttctccccatctgaagagaacttgaggcataaaggt 19066368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 285 - 440
Target Start/End: Original strand, 14609915 - 14610069
Alignment:
Q  285 ttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaata 384  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||||  ||| ||| ||| ||||||||||||||||||||    
T  14609915 ttgatatggactcaatgagtggatgtccggatggcccattaacggaataatgg-aaaccctaatggtcatctaatgtaaaagaggttatggtccccaata 14610013  T
Q  385 cactgtacacggcaaactctctcttctccccatctgaagagaacttgaggcataaa 440  Q
    ||| | |||||||||||| ||| ||||||||||||||||||||||| |||||||||    
T  14610014 caccgaacacggcaaactttcttttctccccatctgaagagaactttaggcataaa 14610069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 299 - 440
Target Start/End: Complemental strand, 19060171 - 19060030
Alignment:
Q  299 atgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaatacactgtacacggca 398  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||    ||||| ||    
T  19060171 atgagtggatgtctggatgtcccattaacggaataatgggaaaccctaatggccatccaatataaaagaggctatggtccccaatacatcagacacgaca 19060072  T
Q  399 aactctctcttctccccatctgaagagaacttgaggcataaa 440  Q
    |||||||||||||||| || ||||||||||||||||||||||    
T  19060071 aactctctcttctcccgatatgaagagaacttgaggcataaa 19060030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 285 - 440
Target Start/End: Original strand, 20499883 - 20500039
Alignment:
Q  285 ttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaata 384  Q
    |||||||||||| |||||||||||||| ||||| |||||||||| |||||||| ||||||||||||  |||||||| |  ||||| ||||||||||||||    
T  20499883 ttgatatggactcaatgagtggatgtctggatggcccattaacgaaataatggaaaaccctaatggtcatccaataaataagaggctatggtccccaata 20499982  T
Q  385 cactgtacacggc-aaactctctcttctccccatctgaagagaacttgaggcataaa 440  Q
    ||| ||||||||| ||||||||| ||||| |||| ||||||||||||||||||||||    
T  20499983 caccgtacacggcaaaactctctgttctctccatttgaagagaacttgaggcataaa 20500039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 287 - 443
Target Start/End: Complemental strand, 30384796 - 30384642
Alignment:
Q  287 gatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaataca 386  Q
    |||||||| | |||||||||||||| ||||||| ||||||||||||||||| ||| | |||| |  ||||||||||| ||||  ||||||||| ||||||    
T  30384796 gatatggattcaatgagtggatgtctggatgactcattaacggaataatggaaaatc-taatagtcatccaatataaaagagactatggtccc-aataca 30384699  T
Q  387 ctgtacacggcaaactctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    | |||||||||||||  |||||||||||||||||||||||||| |||| ||||||||    
T  30384698 ccgtacacggcaaacattctcttctccccatctgaagagaactcgaggtataaaggt 30384642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 284 - 443
Target Start/End: Original strand, 30772024 - 30772185
Alignment:
Q  284 gttgatatggacttaat--gagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtcccca 381  Q
    ||||||||||||| |||  ||||||||||| ||||||||||||||| ||||||||  ||||||| |||   ||||||||||  ||||  |||||||| ||    
T  30772024 gttgatatggactcaatatgagtggatgtctggatgacccattaacagaataatgaaaaaccctgatgatcatccaatatagaagagactatggtccaca 30772123  T
Q  382 atacactgtacacggcaaactctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    ||| |    ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  30772124 atatatcagacacgacaaactctctcttctccccatctgaagagaacttgaggcataaaggt 30772185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 325 - 440
Target Start/End: Complemental strand, 33849242 - 33849128
Alignment:
Q  325 aacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaatacactgtacacggcaaactctctcttctccccatctgaaga 424  Q
    ||||||||||||||||||||||||| |||||  || ||| ||||  |||| ||| || ||||||||||||  || |||||||||||||||||||  | ||    
T  33849242 aacggaataatgggaaaccctaatgactatcatat-taaaagagcctatgttcctcagtacactgtacacaccatactctctcttctccccatccaagga 33849144  T
Q  425 gaacttgaggcataaa 440  Q
    ||||||||||||||||    
T  33849143 gaacttgaggcataaa 33849128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 299 - 440
Target Start/End: Complemental strand, 33753634 - 33753494
Alignment:
Q  299 atgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaatacactgtacacggca 398  Q
    |||||||||| |  ||||||  ||||||||||||||||||||||||||||| | |||  || ||| ||||  |||| ||| || ||||| ||||||  ||    
T  33753634 atgagtggatttatggatgatacattaacggaataatgggaaaccctaatgaccatcatat-taaaagagcctatgttcctcagtacaccgtacacacca 33753536  T
Q  399 aactctctcttctccccatctgaagagaacttgaggcataaa 440  Q
     |||||||||||||||||||  | ||||||||||||||||||    
T  33753535 tactctctcttctccccatccaaggagaacttgaggcataaa 33753494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 189 - 226
Target Start/End: Original strand, 41296928 - 41296965
Alignment:
Q  189 ctatttatcaattgtgaaccttagttgattagtgatca 226  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  41296928 ctatttatcaattgtgagccttagttgattagtgatca 41296965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 365 - 443
Target Start/End: Original strand, 26509675 - 26509751
Alignment:
Q  365 agaggttatggtccccaatacactgtacacggcaaactctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    |||||||||||||| | ||| || |||||||| |||||||| ||| |||  |||||| ||||||| |||||||||||||    
T  26509675 agaggttatggtccacgatataccgtacacggtaaactctcccttttcc--atctgatgagaactagaggcataaaggt 26509751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 188 - 226
Target Start/End: Complemental strand, 32094733 - 32094695
Alignment:
Q  188 actatttatcaattgtgaaccttagttgattagtgatca 226  Q
    |||||||||||||||||| ||||| ||||||||||||||    
T  32094733 actatttatcaattgtgagccttaattgattagtgatca 32094695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 226
Target Start/End: Complemental strand, 7390058 - 7390021
Alignment:
Q  189 ctatttatcaattgtgaaccttagttgattagtgatca 226  Q
    |||||||||||||||||  |||||||||||||||||||    
T  7390058 ctatttatcaattgtgagtcttagttgattagtgatca 7390021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 226
Target Start/End: Complemental strand, 12686689 - 12686652
Alignment:
Q  189 ctatttatcaattgtgaaccttagttgattagtgatca 226  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  12686689 ctatttatcaattgtgagccttaattgattagtgatca 12686652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 226
Target Start/End: Complemental strand, 12692791 - 12692754
Alignment:
Q  189 ctatttatcaattgtgaaccttagttgattagtgatca 226  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  12692791 ctatttatcaattgtgagccttaattgattagtgatca 12692754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 226
Target Start/End: Complemental strand, 28525896 - 28525859
Alignment:
Q  189 ctatttatcaattgtgaaccttagttgattagtgatca 226  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  28525896 ctatttatcaattgtgggccttagttgattagtgatca 28525859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 226
Target Start/End: Complemental strand, 28531992 - 28531955
Alignment:
Q  189 ctatttatcaattgtgaaccttagttgattagtgatca 226  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  28531992 ctatttatcaattgtgggccttagttgattagtgatca 28531955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 226
Target Start/End: Complemental strand, 25408474 - 25408438
Alignment:
Q  190 tatttatcaattgtgaaccttagttgattagtgatca 226  Q
    |||||||||||||||| ||||| ||||||||||||||    
T  25408474 tatttatcaattgtgagccttaattgattagtgatca 25408438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 144; Significance: 2e-75; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 284 - 443
Target Start/End: Original strand, 8331531 - 8331690
Alignment:
Q  284 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaat 383  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||| |||||||||||||    
T  8331531 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggtcatccaatataaaagaggctatggtccccaat 8331630  T
Q  384 acactgtacacggcaaactctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8331631 acactgtacacggcaaactctctcttctccccatctgaagagaacttgaggcataaaggt 8331690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 284 - 443
Target Start/End: Complemental strand, 38449479 - 38449319
Alignment:
Q  284 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaat 383  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||| |||||||||||||    
T  38449479 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggtcatccaatataaaagaggctatggtccccaat 38449380  T
Q  384 acactgtacacggcaa-actctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    | || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  38449379 ataccgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggt 38449319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 284 - 443
Target Start/End: Complemental strand, 38455966 - 38455806
Alignment:
Q  284 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaat 383  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||| |||||||||||||    
T  38455966 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggtcatccaatataaaagaggctatggtccccaat 38455867  T
Q  384 acactgtacacggcaa-actctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    | || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  38455866 ataccgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggt 38455806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 284 - 443
Target Start/End: Complemental strand, 10769385 - 10769225
Alignment:
Q  284 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaat 383  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||    
T  10769385 gttgatatggactcaatgagtggatgtccggatggcccattaacggaataatgggaaaccctaatggccatccaatataaaagaggctatggtccccaat 10769286  T
Q  384 acactgtacacggcaa-actctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    | || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  10769285 ataccgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggt 10769225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 284 - 443
Target Start/End: Original strand, 49151356 - 49151515
Alignment:
Q  284 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaat 383  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||    
T  49151356 gttgatatggactcaatgagtggatgtccggatggcccattaacggaataatgggaaaccctaatggccatccaatataaaagaggctatggtccccaat 49151455  T
Q  384 acactgtacacggcaaactctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    | || ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  49151456 ataccgtacatggcaaactctctcttctccccatctgaagagaacgtgaggcataaaggt 49151515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 284 - 443
Target Start/End: Original strand, 49157423 - 49157582
Alignment:
Q  284 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaat 383  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||    
T  49157423 gttgatatggactcaatgagtggatgtccggatggcccattaacggaataatgggaaaccctaatggccatccaatataaaagaggctatggtccccaat 49157522  T
Q  384 acactgtacacggcaaactctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    | || ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  49157523 ataccgtacatggcaaactctctcttctccccatctgaagagaacgtgaggcataaaggt 49157582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 284 - 443
Target Start/End: Complemental strand, 11840143 - 11839981
Alignment:
Q  284 gttgatatggacttaa--tgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtcccca 381  Q
    ||||||||||||| ||  |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||    
T  11840143 gttgatatggactcaacatgagtggatgtccggatggcccattaacggaataatgggaaaccctaatggccatccaatataaaagaggctatggtcccca 11840044  T
Q  382 atacactgtacacggcaa-actctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  11840043 atacaccgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggt 11839981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 284 - 443
Target Start/End: Complemental strand, 30051516 - 30051358
Alignment:
Q  284 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaat 383  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||||| ||||| |||||||||||||    
T  30051516 gttgatatggacttaacgagtggatgtccggatggcccattaacggaataatgg-aaaccctaatggccatccaatataaaagaggctatggtccccaat 30051418  T
Q  384 acactgtacacggcaaactctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    | || ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  30051417 ataccgtacacggcaaactctctcttctgcccatctgaagagaacttgaggcataaaggt 30051358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 284 - 443
Target Start/End: Complemental strand, 42191638 - 42191476
Alignment:
Q  284 gttgatatggacttaa--tgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtcccca 381  Q
    ||||||||||||| ||  |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||    
T  42191638 gttgatatggactcaacatgagtggatgtccggatggcccattaacggaataatgggaaaccctaatggccatccaatataaaagaggctatggtcccca 42191539  T
Q  382 atacactgtacacggcaa-actctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  42191538 atacaccgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggt 42191476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 284 - 443
Target Start/End: Complemental strand, 42197580 - 42197418
Alignment:
Q  284 gttgatatggacttaa--tgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtcccca 381  Q
    ||||||||||||| ||  |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||    
T  42197580 gttgatatggactcaacatgagtggatgtccggatggcccattaacggaataatgggaaaccctaatggccatccaatataaaagaggctatggtcccca 42197481  T
Q  382 atacactgtacacggcaa-actctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  42197480 atacaccgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggt 42197418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 284 - 440
Target Start/End: Complemental strand, 10238630 - 10238471
Alignment:
Q  284 gttgatatggacttaa--tgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtcccca 381  Q
    ||||||||||||| ||  |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||    
T  10238630 gttgatatggactcaacatgagtggatgtccggatggcccattaacggaataatgggaaaccctaatggccatccaatataaaagaggctatggtcccca 10238531  T
Q  382 atacactgtacacggcaa-actctctcttctccccatctgaagagaacttgaggcataaa 440  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  10238530 atacaccgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaa 10238471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 284 - 440
Target Start/End: Complemental strand, 10244752 - 10244593
Alignment:
Q  284 gttgatatggacttaa--tgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtcccca 381  Q
    ||||||||||||| ||  |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||    
T  10244752 gttgatatggactcaacatgagtggatgtccggatggcccattaacggaataatgggaaaccctaatggccatccaatataaaagaggctatggtcccca 10244653  T
Q  382 atacactgtacacggcaa-actctctcttctccccatctgaagagaacttgaggcataaa 440  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  10244652 atacaccgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaa 10244593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 284 - 443
Target Start/End: Complemental strand, 10761066 - 10760906
Alignment:
Q  284 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaat 383  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||||||| ||||| |||||||||||||    
T  10761066 gttgatatggactcaatgagtggatgtccggatggcccattaacggaataatgggaaaccctaatgaccatccaatataaaagaggctatggtccccaat 10760967  T
Q  384 acactgtacacggcaa-actctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    | || ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  10760966 ataccgtacacgacaatactctctcttctccccatctgaagagaacttgaggcataaaggt 10760906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 284 - 443
Target Start/End: Complemental strand, 17056209 - 17056049
Alignment:
Q  284 gttgatatggacttaa--tgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtcccca 381  Q
    ||||||||||||| ||  |||||||||||||||||| || |||||||||||||||||||||||||||||  ||||||||||| ||||| |||||||||||    
T  17056209 gttgatatggactcaacatgagtggatgtccggatg-cctattaacggaataatgggaaaccctaatggacatccaatataaaagaggctatggtcccca 17056111  T
Q  382 atacactgtacacggcaaactctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17056110 atacatcgtacacggcaaactctctcttctccccatctgaagagaacttgaggcataaaggt 17056049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 299 - 443
Target Start/End: Complemental strand, 26429818 - 26429673
Alignment:
Q  299 atgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaatacactgtacacggca 398  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||| ||||| ||||| |||||||||||||| || ||||||||||    
T  26429818 atgagtggatgtccggatggcccattaacggaataatgggaaaccctaatggtcatccagtataaaagaggctatggtccccaatataccgtacacggca 26429719  T
Q  399 a-actctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    | ||||||||||||||||||||||||||||||||||||||||||||    
T  26429718 atactctctcttctccccatctgaagagaacttgaggcataaaggt 26429673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 284 - 437
Target Start/End: Original strand, 28964624 - 28964777
Alignment:
Q  284 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaat 383  Q
    ||||||||||||| ||||||||||||||||||||  ||||||||||||||||| |||||||||||||  ||||||||||| ||||| |||||||||||||    
T  28964624 gttgatatggactcaatgagtggatgtccggatggtccattaacggaataatgagaaaccctaatggtcatccaatataaaagaggctatggtccccaat 28964723  T
Q  384 acactgtacacggcaaactctctcttctccccatctgaagagaacttgaggcat 437  Q
    | || |||||||| |||||||||||||||||||||||||||||||| |||||||    
T  28964724 ataccgtacacggaaaactctctcttctccccatctgaagagaactcgaggcat 28964777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 284 - 443
Target Start/End: Complemental strand, 55003819 - 55003665
Alignment:
Q  284 gttgatatggacttaa--tgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtcccca 381  Q
    ||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||       |  ||||||||||| |||||||||||||||||    
T  55003819 gttgatatggactcaacatgagtggatgtccggatgacccattaacggaataatgggaaac-------gtcatccaatataaaagaggttatggtcccca 55003727  T
Q  382 atacactgtacacggcaaactctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    ||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  55003726 atataccgtacacgacaaactctctcttctccccatctgaagagaacttgaggcataaaggt 55003665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 288 - 443
Target Start/End: Complemental strand, 48128451 - 48128296
Alignment:
Q  288 atatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaatacac 387  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||  ||||||||||| ||||| |||||||||||||| ||    
T  48128451 atatggactcaatgagtggatgtccggatgacccattaacggaataatggaaaaccttaatggtcatccaatataaaagaggctatggtccccaatatac 48128352  T
Q  388 tgtacacggcaaactctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
     |||||||||||||  |||||||||||  |||||||||||||  ||||||||||||    
T  48128351 cgtacacggcaaacattctcttctccctgtctgaagagaactaaaggcataaaggt 48128296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 284 - 443
Target Start/End: Original strand, 46656424 - 46656577
Alignment:
Q  284 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaat 383  Q
    ||||||||| |||  |||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||| |||||||||||| ||||||    
T  46656424 gttgatatgtactcgatgagtggatgtccggatgacctattaacggaataatgggaaaccctattggttatccaatataaaagaggttatggttcccaat 46656523  T
Q  384 acactgtacacggcaaactctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    |||| |||      ||||  ||||||||||||||||||| |||| | ||| |||||||||    
T  46656524 acaccgta------aaacattctcttctccccatctgaatagaattagagacataaaggt 46656577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 323 - 440
Target Start/End: Original strand, 13444840 - 13444958
Alignment:
Q  323 ttaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaatacactgtacacggc-aaactctctcttctccccatctga 421  Q
    |||||| |||||||||||||||||||||| ||||||||||| | ||||||||||||||||||||| ||||||  | | | ||||||||||||||||||||    
T  13444840 ttaacgaaataatgggaaaccctaatggccatccaatataaaataggttatggtccccaatacaccgtacacaacgatattctctcttctccccatctga 13444939  T
Q  422 agagaacttgaggcataaa 440  Q
    |||||||||||||||||||    
T  13444940 agagaacttgaggcataaa 13444958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 307 - 429
Target Start/End: Complemental strand, 53069443 - 53069319
Alignment:
Q  307 atgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataata--gaggttatggtccccaatacactgtacacggcaaactct 404  Q
    ||||||||||||||||||||| |||||||||||||||||||||    |||||||||| |  |||| |||||||| |||||||| ||||| ||||||||||    
T  53069443 atgtccggatgacccattaacagaataatgggaaaccctaatgatcgtccaatataaaaaagaggctatggtcctcaatacaccgtacatggcaaactct 53069344  T
Q  405 ctcttctccccatctgaagagaact 429  Q
    |||||||||||||||||||||||||    
T  53069343 ctcttctccccatctgaagagaact 53069319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 303 - 423
Target Start/End: Complemental strand, 13367233 - 13367114
Alignment:
Q  303 gtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaatacactgtacacggcaaact 402  Q
    ||||||||| |||||  |||||||||||||||||||||||||||||| | ||||||||||| ||||| |||||||||||||| || |||||  |||||      
T  13367233 gtggatgtctggatggtccattaacggaataatgggaaaccctaatgaccatccaatataa-agaggctatggtccccaatataccgtacatagcaaaac 13367135  T
Q  403 ctctcttctccccatctgaag 423  Q
    | |||||||||||||||||||    
T  13367134 cgctcttctccccatctgaag 13367114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 284 - 337
Target Start/End: Complemental strand, 23138832 - 23138779
Alignment:
Q  284 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgg 337  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23138832 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgg 23138779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 303 - 423
Target Start/End: Original strand, 9760481 - 9760600
Alignment:
Q  303 gtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaatacactgtacacggcaaact 402  Q
    ||||||||| |||||  ||||||| |||||||| ||||||||||||||  ||||||||||| ||||| |||||||||||||| || |||||  | |||      
T  9760481 gtggatgtctggatggtccattaaaggaataataggaaaccctaatggtcatccaatataa-agaggatatggtccccaatataccgtacatagtaaaac 9760579  T
Q  403 ctctcttctccccatctgaag 423  Q
    | |||||||||||||||||||    
T  9760580 cgctcttctccccatctgaag 9760600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 400 - 443
Target Start/End: Original strand, 13837534 - 13837577
Alignment:
Q  400 actctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  13837534 actctctcttctccccatctgaagagaacttgaggcataaaggt 13837577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 307 - 441
Target Start/End: Complemental strand, 2982616 - 2982483
Alignment:
Q  307 atgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaatacactgtacacggcaaactctct 406  Q
    ||||| ||||||||||||||  ||||||||  ||| ||||||| | | | ||||||| |||||| |||||||| |||| ||  || ||||| ||||||||    
T  2982616 atgtcaggatgacccattaaaagaataatga-aaatcctaatgaccaacaaatataaaagaggtcatggtcccaaatataccatatacggcgaactctct 2982518  T
Q  407 cttctccccatctgaagagaacttgaggcataaag 441  Q
     ||||||| ||||||||||||||| || |||||||    
T  2982517 tttctccctatctgaagagaacttaagacataaag 2982483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 284 - 351
Target Start/End: Complemental strand, 17601951 - 17601882
Alignment:
Q  284 gttgatatggacttaa--tgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggc 351  Q
    ||||||||||||| ||  ||| |||||||||| ||||||||||||||||||||||  |||||||||||||    
T  17601951 gttgatatggactcaacatgattggatgtccgaatgacccattaacggaataatgacaaaccctaatggc 17601882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 11846392 - 11846340
Alignment:
Q  284 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatg 336  Q
    |||||||| || | |||||||||||||||||||| ||||||||||||||||||    
T  11846392 gttgatattgagtcaatgagtggatgtccggatggcccattaacggaataatg 11846340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 189 - 226
Target Start/End: Original strand, 8331436 - 8331473
Alignment:
Q  189 ctatttatcaattgtgaaccttagttgattagtgatca 226  Q
    |||||||||||||||| |||||||||||||||||||||    
T  8331436 ctatttatcaattgtggaccttagttgattagtgatca 8331473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 189 - 226
Target Start/End: Complemental strand, 10761161 - 10761124
Alignment:
Q  189 ctatttatcaattgtgaaccttagttgattagtgatca 226  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  10761161 ctatttatcaattgtgagccttagttgattagtgatca 10761124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 189 - 226
Target Start/End: Complemental strand, 10769480 - 10769443
Alignment:
Q  189 ctatttatcaattgtgaaccttagttgattagtgatca 226  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  10769480 ctatttatcaattgtgagccttagttgattagtgatca 10769443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 189 - 226
Target Start/End: Complemental strand, 30051611 - 30051574
Alignment:
Q  189 ctatttatcaattgtgaaccttagttgattagtgatca 226  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  30051611 ctatttatcaattgtgagccttagttgattagtgatca 30051574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 190 - 226
Target Start/End: Complemental strand, 53071761 - 53071725
Alignment:
Q  190 tatttatcaattgtgaaccttagttgattagtgatca 226  Q
    |||||||||||||||| ||||||||||||||||||||    
T  53071761 tatttatcaattgtgagccttagttgattagtgatca 53071725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 222
Target Start/End: Complemental strand, 9586523 - 9586490
Alignment:
Q  189 ctatttatcaattgtgaaccttagttgattagtg 222  Q
    ||||||||||||||||| ||||||||||||||||    
T  9586523 ctatttatcaattgtgagccttagttgattagtg 9586490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 226
Target Start/End: Complemental strand, 11840236 - 11840199
Alignment:
Q  189 ctatttatcaattgtgaaccttagttgattagtgatca 226  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  11840236 ctatttatcaattgtgagccttaattgattagtgatca 11840199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 285 - 443
Target Start/End: Complemental strand, 12109082 - 12108927
Alignment:
Q  285 ttgatatggacttaat--gagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaa 382  Q
    |||||||||||| |||  |||| ||||||  |||||| | |||||||||||||| ||||    |||||  || |||||||| ||||  || ||||| |||    
T  12109082 ttgatatggactcaatatgagttgatgtctagatgactcgttaacggaataatgagaaataacaatggtcattcaatataaaagagagtacggtcctcaa 12108983  T
Q  383 tacactgtacacggcaaactctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    ||||  |||||||||||||| ||| |||| || ||||     |||||||||||||||||||    
T  12108982 tacatcgtacacggcaaactatcttttcttccgatct-----gaacttgaggcataaaggt 12108927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 226
Target Start/End: Complemental strand, 17056302 - 17056265
Alignment:
Q  189 ctatttatcaattgtgaaccttagttgattagtgatca 226  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  17056302 ctatttatcaattgtgagccttaattgattagtgatca 17056265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 226
Target Start/End: Complemental strand, 23138927 - 23138890
Alignment:
Q  189 ctatttatcaattgtgaaccttagttgattagtgatca 226  Q
    |||||||||||||||||  |||||||||||||||||||    
T  23138927 ctatttatcaattgtgagtcttagttgattagtgatca 23138890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 226
Target Start/End: Complemental strand, 26429928 - 26429891
Alignment:
Q  189 ctatttatcaattgtgaaccttagttgattagtgatca 226  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  26429928 ctatttatcaattgtgagccttaattgattagtgatca 26429891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 226
Target Start/End: Original strand, 28964529 - 28964566
Alignment:
Q  189 ctatttatcaattgtgaaccttagttgattagtgatca 226  Q
    |||||||| |||||||| ||||||||||||||||||||    
T  28964529 ctatttataaattgtgagccttagttgattagtgatca 28964566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 226
Target Start/End: Complemental strand, 38449574 - 38449537
Alignment:
Q  189 ctatttatcaattgtgaaccttagttgattagtgatca 226  Q
    |||||||||||||||||  |||||||||||||||||||    
T  38449574 ctatttatcaattgtgagtcttagttgattagtgatca 38449537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 226
Target Start/End: Complemental strand, 42191731 - 42191694
Alignment:
Q  189 ctatttatcaattgtgaaccttagttgattagtgatca 226  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  42191731 ctatttatcaattgtgagccttaattgattagtgatca 42191694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 226
Target Start/End: Complemental strand, 42197673 - 42197636
Alignment:
Q  189 ctatttatcaattgtgaaccttagttgattagtgatca 226  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  42197673 ctatttatcaattgtgagccttaattgattagtgatca 42197636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 226
Target Start/End: Original strand, 49151261 - 49151298
Alignment:
Q  189 ctatttatcaattgtgaaccttagttgattagtgatca 226  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  49151261 ctatttatcaattgtgggccttagttgattagtgatca 49151298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 226
Target Start/End: Original strand, 49157328 - 49157365
Alignment:
Q  189 ctatttatcaattgtgaaccttagttgattagtgatca 226  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  49157328 ctatttatcaattgtgggccttagttgattagtgatca 49157365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 226
Target Start/End: Complemental strand, 24644000 - 24643964
Alignment:
Q  190 tatttatcaattgtgaaccttagttgattagtgatca 226  Q
    ||||||||||||||||  |||||||||||||||||||    
T  24644000 tatttatcaattgtgagtcttagttgattagtgatca 24643964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 133; Significance: 6e-69; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 284 - 443
Target Start/End: Complemental strand, 5542576 - 5542416
Alignment:
Q  284 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaat 383  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||    
T  5542576 gttgatatggactcaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggccatccaatataaaagaggctatggtccccaat 5542477  T
Q  384 acactgtacacggcaa-actctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  5542476 acaccgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggt 5542416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 284 - 443
Target Start/End: Original strand, 36818714 - 36818875
Alignment:
Q  284 gttgatatggacttaa--tgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtcccca 381  Q
    ||||||||||||| ||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||    
T  36818714 gttgatatggactcaacatgagtggatgtccggatggcccattaacggaataatgggaaaccctaatggctatcaaatataaaagaggctatggtcccca 36818813  T
Q  382 atacactgtacacggcaaactctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    ||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  36818814 atataccgtacacggcaaactctctcttctccccatctgatgagaacttgaggcataaaggt 36818875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 284 - 443
Target Start/End: Complemental strand, 22220143 - 22219983
Alignment:
Q  284 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaat 383  Q
    ||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||| ||||| |||||||||||||    
T  22220143 gttgatatggactcaatgaatggatgtccggatggcccattaacggaataatgggaaaccctaatggtcatccaatataaaagaggctatggtccccaat 22220044  T
Q  384 acactgtacacggcaa-actctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    | || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  22220043 ataccgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggt 22219983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 284 - 443
Target Start/End: Original strand, 32890630 - 32890792
Alignment:
Q  284 gttgatatggacttaa--tgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtcccca 381  Q
    ||||||||||||| ||  |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||    
T  32890630 gttgatatggactcaacatgagtggatgtccggatggcccattaacggaataatgggaaaccctaatggccatccaatataaaagaggctatggtcccca 32890729  T
Q  382 atacactgtacacggcaa-actctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    ||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  32890730 atataccgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggt 32890792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 284 - 443
Target Start/End: Original strand, 32896754 - 32896916
Alignment:
Q  284 gttgatatggacttaa--tgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtcccca 381  Q
    ||||||||||||| ||  |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||    
T  32896754 gttgatatggactcaacatgagtggatgtccggatggcccattaacggaataatgggaaaccctaatggccatccaatataaaagaggctatggtcccca 32896853  T
Q  382 atacactgtacacggcaa-actctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    ||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  32896854 atataccgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggt 32896916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 284 - 443
Target Start/End: Original strand, 42033541 - 42033704
Alignment:
Q  284 gttgatatggacttaatgagtggatgtccggatg----acccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccc 379  Q
    ||||||||||||| ||||||||||||||||||||     ||||||||||||||||||||||||||||||||  |||||||||||  |||| |||||||||    
T  42033541 gttgatatggactcaatgagtggatgtccggatggcccgcccattaacggaataatgggaaaccctaatggtcatccaatataaaggaggctatggtccc 42033640  T
Q  380 caatacactgtacacggcaaactctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  42033641 caatacattgtacacggcaaactctctcttctctccatctgaagagaacttgaggcataaaggt 42033704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 284 - 443
Target Start/End: Original strand, 10699773 - 10699933
Alignment:
Q  284 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaat 383  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||  ||| ||||||| ||||  |||||||||||||    
T  10699773 gttgatatggactcaatgagtggatgtccggatgacccattaacggagtaatgggaaaccctaatggtcatcaaatataaaagagactatggtccccaat 10699872  T
Q  384 acactgtacacggcaa-actctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    | || ||||||||||| ||||||||||||| |||||||| || ||||||||||||||||||    
T  10699873 ataccgtacacggcaatactctctcttctctccatctgacgaaaacttgaggcataaaggt 10699933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 285 - 443
Target Start/End: Original strand, 9935026 - 9935182
Alignment:
Q  285 ttgatatggacttaa--tgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaa 382  Q
    |||||||||||| ||  ||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||| |||| ||||| ||||||||||||    
T  9935026 ttgatatggactcaacatgagtggatatccggatgacccattaacggaataatgggaaa-cctaatggccatccaa-ataaaagaggctatggtccccaa 9935123  T
Q  383 tacactgtacacggcaaactctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    ||||| ||||||| ||||  |||||||||||||||||||||||||||||||||||||||||    
T  9935124 tacaccgtacacgacaaa--ctctcttctccccatctgaagagaacttgaggcataaaggt 9935182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 284 - 443
Target Start/End: Complemental strand, 42993417 - 42993259
Alignment:
Q  284 gttgatatggacttaa--tgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtcccca 381  Q
    ||||||||||||| ||  |||||||||||||| ||| |||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||    
T  42993417 gttgatatggactcaacatgagtggatgtccg-atggcccattaacggaataatgggaaaccctaatcgccatccaatataaaagaggttatggtcccca 42993319  T
Q  382 atacactgtacacggcaa-actctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    ||| || | ||||||||| |||||   ||||||||||||||||||||||||||||||||||||    
T  42993318 atataccgaacacggcaatactct---ttctccccatctgaagagaacttgaggcataaaggt 42993259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 284 - 443
Target Start/End: Original strand, 10705582 - 10705741
Alignment:
Q  284 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaat 383  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||| |  ||| ||||||| ||||| ||||||| |||||    
T  10705582 gttgatatggactcaatgagtggatgtccggatggcccattaacggaataat-ggaaaccctaatagtcatcaaatataaaagaggctatggtctccaat 10705680  T
Q  384 acactgtacacggcaa-actctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    | || ||||||| ||| ||||||||||||||||||||||||||||||| || |||||||||    
T  10705681 ataccgtacacgacaatactctctcttctccccatctgaagagaacttaagccataaaggt 10705741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 284 - 440
Target Start/End: Complemental strand, 39735954 - 39735807
Alignment:
Q  284 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaat 383  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||| ||||| | ||||           
T  39735954 gttgatatggactcaatcagtggatgtccggatgacccattaacggaataa-gggaaaccctaatggccatctaatataaaagaggctctggt------- 39735863  T
Q  384 acactgtacacggc-aaactctctcttctccccatctgaagagaacttgaggcataaa 440  Q
      || ||||||| | |||||||||||||||||||||||||||| ||||||||||||||    
T  39735862 --accgtacacgacaaaactctctcttctccccatctgaagagtacttgaggcataaa 39735807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 365 - 440
Target Start/End: Original strand, 14417766 - 14417841
Alignment:
Q  365 agaggttatggtccccaatacactgtacacggcaaactctctcttctccccatctgaagagaacttgaggcataaa 440  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14417766 agaggctatggtccccaatacaccgtacacggcaaactctctcttctccccatctgaagagaacttgaggcataaa 14417841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 371 - 443
Target Start/End: Complemental strand, 1883147 - 1883075
Alignment:
Q  371 tatggtccccaatacactgtacacggcaaactctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    |||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  1883147 tatggtccccaatacacaatacacggcaaactttctcttctccccatctgaagagaacttgagacataaaggt 1883075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 299 - 357
Target Start/End: Complemental strand, 1883243 - 1883185
Alignment:
Q  299 atgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatcca 357  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||    
T  1883243 atgagtggatgtccggatgacccattaacgaaataatgggaaaccttaatggccatcca 1883185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 365 - 443
Target Start/End: Complemental strand, 39727643 - 39727564
Alignment:
Q  365 agaggttatggtccccaatacactgtacacggcaaa-ctctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    ||||| |||||||||||||| || ||||||  |||| ||||||||||||||||||| ||||| |||||||||||||||||    
T  39727643 agaggatatggtccccaatataccgtacacaacaaaactctctcttctccccatctcaagagtacttgaggcataaaggt 39727564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 285 - 341
Target Start/End: Complemental strand, 39727699 - 39727643
Alignment:
Q  285 ttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaa 341  Q
    |||||||||||| |||||||||||||||||||  ||||||||||||| |||||||||    
T  39727699 ttgatatggactcaatgagtggatgtccggatagcccattaacggaacaatgggaaa 39727643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 284 - 341
Target Start/End: Original strand, 14417705 - 14417762
Alignment:
Q  284 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaa 341  Q
    |||||||||| || ||||||||||||| |||||| |||||||||| ||||||||||||    
T  14417705 gttgatatgggctcaatgagtggatgttcggatgtcccattaacgaaataatgggaaa 14417762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 284 - 430
Target Start/End: Original strand, 17954250 - 17954393
Alignment:
Q  284 gttgatatggacttaa--tgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggcta-tccaatataatagaggttatggtcccc 380  Q
    ||||||||||||| ||  ||||||||||| | ||||||||| |||||||||||||| |||||||||| | || | || ||||  ||||| |||| ||  |    
T  17954250 gttgatatggactcaaaatgagtggatgttcagatgacccactaacggaataatggaaaaccctaattgatattacactata--agaggctatgatcatc 17954347  T
Q  381 aatacactgtacacggcaaactctctcttctccccatctgaagagaactt 430  Q
    |||||   ||||||| |||||||| ||||||||||||| |||||||||||    
T  17954348 aatac---gtacacgacaaactctttcttctccccatc-gaagagaactt 17954393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 395 - 429
Target Start/End: Original strand, 1171215 - 1171249
Alignment:
Q  395 ggcaaactctctcttctccccatctgaagagaact 429  Q
    |||||||||||||||||||||||||||||||||||    
T  1171215 ggcaaactctctcttctccccatctgaagagaact 1171249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 226
Target Start/End: Original strand, 10705487 - 10705524
Alignment:
Q  189 ctatttatcaattgtgaaccttagttgattagtgatca 226  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  10705487 ctatttatcaattgtgagccttaattgattagtgatca 10705524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 226
Target Start/End: Original strand, 32890537 - 32890574
Alignment:
Q  189 ctatttatcaattgtgaaccttagttgattagtgatca 226  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  32890537 ctatttatcaattgtgacccttaattgattagtgatca 32890574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 226
Target Start/End: Original strand, 32896661 - 32896698
Alignment:
Q  189 ctatttatcaattgtgaaccttagttgattagtgatca 226  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  32896661 ctatttatcaattgtgagccttaattgattagtgatca 32896698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 226
Target Start/End: Original strand, 36818621 - 36818658
Alignment:
Q  189 ctatttatcaattgtgaaccttagttgattagtgatca 226  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  36818621 ctatttatcaattgtgagccttaattgattagtgatca 36818658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 226
Target Start/End: Complemental strand, 39727795 - 39727758
Alignment:
Q  189 ctatttatcaattgtgaaccttagttgattagtgatca 226  Q
    |||||||||||||||||  |||||||||||||||||||    
T  39727795 ctatttatcaattgtgagacttagttgattagtgatca 39727758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 226
Target Start/End: Complemental strand, 39736049 - 39736012
Alignment:
Q  189 ctatttatcaattgtgaaccttagttgattagtgatca 226  Q
    ||||||||||||||||| | ||||||||||||||||||    
T  39736049 ctatttatcaattgtgagcattagttgattagtgatca 39736012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 226
Target Start/End: Original strand, 42033446 - 42033483
Alignment:
Q  189 ctatttatcaattgtgaaccttagttgattagtgatca 226  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  42033446 ctatttatcaattgtgagccttaattgattagtgatca 42033483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 226
Target Start/End: Original strand, 10699679 - 10699715
Alignment:
Q  190 tatttatcaattgtgaaccttagttgattagtgatca 226  Q
    |||||||||||||||| ||||| ||||||||||||||    
T  10699679 tatttatcaattgtgagccttaattgattagtgatca 10699715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 226
Target Start/End: Original strand, 14417611 - 14417647
Alignment:
Q  190 tatttatcaattgtgaaccttagttgattagtgatca 226  Q
    ||||||||||||||||  |||||||||||||||||||    
T  14417611 tatttatcaattgtgagtcttagttgattagtgatca 14417647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 226
Target Start/End: Complemental strand, 42993509 - 42993473
Alignment:
Q  190 tatttatcaattgtgaaccttagttgattagtgatca 226  Q
    |||||||||||||||| ||||| ||||||||||||||    
T  42993509 tatttatcaattgtgagccttaattgattagtgatca 42993473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 132; Significance: 2e-68; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 284 - 443
Target Start/End: Complemental strand, 28683360 - 28683201
Alignment:
Q  284 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaat 383  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||    
T  28683360 gttgatatggactcaatgagtggatgtccggatggcccattaacggaataatgggaaaccctaatggccatccaatataaaagaggctatggtccccaat 28683261  T
Q  384 acactgtacacggcaaactctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    | || |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28683260 ataccgtacacggcaaactctctcttctccccatctgaagagaacttgaggcataaaggt 28683201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 284 - 443
Target Start/End: Complemental strand, 44717221 - 44717061
Alignment:
Q  284 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaat 383  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| | ||||||||||| ||||| |||||||||||||    
T  44717221 gttgatatggacttaatgagtggatgtccggatggcccattaacggaataatggaaaaccctaatgaccatccaatataaaagaggctatggtccccaat 44717122  T
Q  384 acactgtacacggcaa-actctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    |||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  44717121 acaccgtacacggcaatactatctcttctccccatctgaagagaacttgaggcataaaggt 44717061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 284 - 443
Target Start/End: Original strand, 13455841 - 13456003
Alignment:
Q  284 gttgatatggacttaa--tgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtcccca 381  Q
    ||||||||||||| ||  |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||    
T  13455841 gttgatatggactcaacatgagtggatgtccggatggcccattaacggaataatgggaaaccctaatggccatccaatataaaagaggctatggtcccca 13455940  T
Q  382 atacactgtacacggcaa-actctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  13455941 atacaccgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggt 13456003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 284 - 443
Target Start/End: Original strand, 13461782 - 13461944
Alignment:
Q  284 gttgatatggacttaa--tgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtcccca 381  Q
    ||||||||||||| ||  |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||    
T  13461782 gttgatatggactcaacatgagtggatgtccggatggcccattaacggaataatgggaaaccctaatggccatccaatataaaagaggctatggtcccca 13461881  T
Q  382 atacactgtacacggcaa-actctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  13461882 atacaccgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggt 13461944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 284 - 443
Target Start/End: Complemental strand, 35085097 - 35084935
Alignment:
Q  284 gttgatatggacttaa--tgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtcccca 381  Q
    ||||||||||||| ||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  35085097 gttgatatggactcaacatgagtggatgtccggatggcccattaacggaataatgggaaaccctaatggctatccaatataaaagaggctatggtcccca 35084998  T
Q  382 atacactgtacacggcaa-actctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    ||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  35084997 atataccgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggt 35084935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 299 - 443
Target Start/End: Complemental strand, 35091053 - 35090908
Alignment:
Q  299 atgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaatacactgtacacggca 398  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| || ||||||||||    
T  35091053 atgagtggatgtccggatggcccattaacggaataatgggaaaccctaatggctatccaatataaaagaggctatggtccccaatataccgtacacggca 35090954  T
Q  399 a-actctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    | ||||||||||||||||||||||||||||||||||||||||||||    
T  35090953 atactctctcttctccccatctgaagagaacttgaggcataaaggt 35090908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 284 - 443
Target Start/End: Original strand, 31002120 - 31002280
Alignment:
Q  284 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaat 383  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||| |||||||||||||    
T  31002120 gttgatatggactcaatgagtggatgtccggatgacccattaacggaataatgggaaaccataatggccatccaatataaaagaggctatggtccccaat 31002219  T
Q  384 acactgtacacggcaa-actctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    | || ||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  31002220 ataccgtacacaacaatactctctcttctccccatctgaagagaacttgaggcataaaggt 31002280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 284 - 443
Target Start/End: Complemental strand, 11048970 - 11048807
Alignment:
Q  284 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaat 383  Q
    ||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||    
T  11048970 gttgatatggactcaatgggtggatgtctggatgacccattaacggaataatgggaaaccctaatggcgatccaatataaaagaggctatggtccccaat 11048871  T
Q  384 acactgtacacggca----aactctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    |||  ||||||||||    |||||||||||||||||||||||||||||||||||||||||||||    
T  11048870 acatcgtacacggcaaaccaactctctcttctccccatctgaagagaacttgaggcataaaggt 11048807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 284 - 440
Target Start/End: Original strand, 31008098 - 31008255
Alignment:
Q  284 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaat 383  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||| |||||||||||||    
T  31008098 gttgatatggactcaatgagtggatgtccgaatgacccattaacggaataatgggaaaccataatggccatccaatataaaagaggctatggtccccaat 31008197  T
Q  384 acactgtacacggcaa-actctctcttctccccatctgaagagaacttgaggcataaa 440  Q
    | || ||||||  ||| |||||||||||||||||||||||||||||||||||||||||    
T  31008198 ataccgtacacaacaatactctctcttctccccatctgaagagaacttgaggcataaa 31008255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 284 - 441
Target Start/End: Original strand, 36750156 - 36750316
Alignment:
Q  284 gttgatatggacttaa--tgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtcccca 381  Q
    ||||||||||||| ||  |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||| |||    
T  36750156 gttgatatggactcaacatgagtggatgtccggatggcccattaacggaataatgggaaaccctaatggccatccaatataaaagaggctatggtctcca 36750255  T
Q  382 atacactgtacacggcaa-actctctcttctccccatctgaagagaacttgaggcataaag 441  Q
    |||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  36750256 atacaccgtacacgacaatactctctcttctccccatctgaagagaacttgaggcataaag 36750316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 284 - 443
Target Start/End: Original strand, 30965071 - 30965231
Alignment:
Q  284 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaat 383  Q
    ||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||| ||||||||| ||| ||||||| ||||| |||||||||||||    
T  30965071 gttgatatggattcaatgagtggatgtccggatggcccattaacggaataatgggaaatcctaatggccatctaatataaaagaggctatggtccccaat 30965170  T
Q  384 acactgtacacggcaa-actctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    | || ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  30965171 ataccgtacacgacaatactctctcttctccccatctgaagagaacttgaggcataaaggt 30965231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 303 - 443
Target Start/End: Original strand, 23343318 - 23343457
Alignment:
Q  303 gtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaatacactgtacacggcaaact 402  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||| | ||||||||||| ||||| ||||||||||||||||| |||||||| |||||    
T  23343318 gtggatgtccggatgacccattaacagaataatgg-aaaccctaatgaccatccaatataaaagaggctatggtccccaatacaccgtacacgggaaact 23343416  T
Q  403 ctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  23343417 ctctcttctccccatctgaagagaacttgaggcataaaggt 23343457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 284 - 443
Target Start/End: Complemental strand, 13150105 - 13149940
Alignment:
Q  284 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaat 383  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||| ||||||| |||||||||||||||||||    
T  13150105 gttgatatggactcaatgagtggatgtacggatgacccattaacggaataatgggaaaccctaatggtcatctaatataaaagaggttatggtccccaat 13150006  T
Q  384 acactgtacacggcaa-actctctcttctc-----cccatctgaagagaacttgaggcataaaggt 443  Q
    | || ||||||||||| | |||||||||||     | |||||||||||||||||||||||||||||    
T  13150005 ataccgtacacggcaatattctctcttctcctcatctcatctgaagagaacttgaggcataaaggt 13149940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 285 - 443
Target Start/End: Original strand, 19879339 - 19879502
Alignment:
Q  285 ttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataata-----gaggttatggtccc 379  Q
    ||||||| |||| |||||||| |||||| |||||||||||||||||||||||||||||  ||||||| ||||||||||| |     |||||||||||| |    
T  19879339 ttgatattgactcaatgagtgaatgtccagatgacccattaacggaataatgggaaact-taatggccatccaatataacataaaagaggttatggtcgc 19879437  T
Q  380 caatacactgtacacggcaaa-ctctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    |||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  19879438 caatacatcgtacacggcaaaactctctcttctccccatctgaagagaacttgaggcataaaggt 19879502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 284 - 399
Target Start/End: Complemental strand, 35439786 - 35439671
Alignment:
Q  284 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaat 383  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||    
T  35439786 gttgatatgaacttaatgagtggatgtccggatggcccattaacggaataatgggaaaccctaatggccatccaatataaaagaggctatggtccccaat 35439687  T
Q  384 acactgtacacggcaa 399  Q
    | || |||||||||||    
T  35439686 ataccgtacacggcaa 35439671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 284 - 345
Target Start/End: Complemental strand, 35442248 - 35442187
Alignment:
Q  284 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccct 345  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  35442248 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatggaaaaccct 35442187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 390 - 443
Target Start/End: Complemental strand, 35439014 - 35438961
Alignment:
Q  390 tacacggcaaactctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35439014 tacacggcaaactctctcttctccccatctgaagagaacttgaggcataaaggt 35438961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 303 - 379
Target Start/End: Original strand, 23284708 - 23284784
Alignment:
Q  303 gtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccc 379  Q
    |||||||| | ||||||||||||||||||||||| ||||| |||||||| ||| ||||||| ||| |||||||||||    
T  23284708 gtggatgttctgatgacccattaacggaataatgtgaaactctaatggccatcaaatataaaagatgttatggtccc 23284784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 299 - 379
Target Start/End: Complemental strand, 7771586 - 7771508
Alignment:
Q  299 atgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccc 379  Q
    ||||||||| ||||||||||||||||||| ||||||||||||| |||||| |  ||||||||||| | |||||||||||||    
T  7771586 atgagtggacgtccggatgacccattaacagaataatgggaaa-cctaatcgtcatccaatataa-aaaggttatggtccc 7771508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 285 - 432
Target Start/End: Original strand, 31651376 - 31651517
Alignment:
Q  285 ttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatc-caatataatagaggttatggtccccaat 383  Q
    |||||||||||| ||||||| ||||||  ||||| |||||||  ||||||||||||||| ||||| | ||| ||  |||  |||||||| ||||||||||    
T  31651376 ttgatatggactcaatgagtcgatgtctagatgatccattaaaagaataatgggaaaccttaatgaccatcacaccata--agaggttacggtccccaat 31651473  T
Q  384 acactgtacacggc-aaactctctcttctccccatctgaagagaacttga 432  Q
    | ||      |||| ||||||| ||||||||||||||||||| |||||||    
T  31651474 atac------cggcaaaactctttcttctccccatctgaagataacttga 31651517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 299 - 379
Target Start/End: Original strand, 28765341 - 28765421
Alignment:
Q  299 atgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccc 379  Q
    ||||||| ||||  ||||||| ||| ||||||||||||| |||| |||||||| || |||||||| |||||  ||||||||    
T  28765341 atgagtgaatgtatggatgactcatcaacggaataatggaaaactctaatggcgattcaatataaaagaggcaatggtccc 28765421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 226
Target Start/End: Original strand, 13455748 - 13455785
Alignment:
Q  189 ctatttatcaattgtgaaccttagttgattagtgatca 226  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  13455748 ctatttatcaattgtgagccttaattgattagtgatca 13455785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 226
Target Start/End: Original strand, 13461689 - 13461726
Alignment:
Q  189 ctatttatcaattgtgaaccttagttgattagtgatca 226  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  13461689 ctatttatcaattgtgagccttaattgattagtgatca 13461726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 226
Target Start/End: Original strand, 19879243 - 19879280
Alignment:
Q  189 ctatttatcaattgtgaaccttagttgattagtgatca 226  Q
    |||||||| |||||||| ||||||||||||||||||||    
T  19879243 ctatttattaattgtgagccttagttgattagtgatca 19879280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 226
Target Start/End: Original strand, 30964976 - 30965013
Alignment:
Q  189 ctatttatcaattgtgaaccttagttgattagtgatca 226  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  30964976 ctatttatcaattgtgggccttagttgattagtgatca 30965013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 226
Target Start/End: Original strand, 31002025 - 31002062
Alignment:
Q  189 ctatttatcaattgtgaaccttagttgattagtgatca 226  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  31002025 ctatttatcaattgtgggccttagttgattagtgatca 31002062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 226
Target Start/End: Original strand, 31008003 - 31008040
Alignment:
Q  189 ctatttatcaattgtgaaccttagttgattagtgatca 226  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  31008003 ctatttatcaattgtgggccttagttgattagtgatca 31008040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 226
Target Start/End: Complemental strand, 35085190 - 35085153
Alignment:
Q  189 ctatttatcaattgtgaaccttagttgattagtgatca 226  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  35085190 ctatttatcaattgtgagccttaattgattagtgatca 35085153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 226
Target Start/End: Complemental strand, 35091163 - 35091126
Alignment:
Q  189 ctatttatcaattgtgaaccttagttgattagtgatca 226  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  35091163 ctatttatcaattgtgagccttaattgattagtgatca 35091126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 226
Target Start/End: Original strand, 36750063 - 36750100
Alignment:
Q  189 ctatttatcaattgtgaaccttagttgattagtgatca 226  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  36750063 ctatttatcaattgtgagccttaattgattagtgatca 36750100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 226
Target Start/End: Complemental strand, 44717316 - 44717279
Alignment:
Q  189 ctatttatcaattgtgaaccttagttgattagtgatca 226  Q
    |||||||||||||||||  |||||||||||||||||||    
T  44717316 ctatttatcaattgtgagtcttagttgattagtgatca 44717279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 226
Target Start/End: Complemental strand, 28683454 - 28683418
Alignment:
Q  190 tatttatcaattgtgaaccttagttgattagtgatca 226  Q
    |||||||||||||||  ||||||||||||||||||||    
T  28683454 tatttatcaattgtgggccttagttgattagtgatca 28683418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 298 - 350
Target Start/End: Original strand, 29832969 - 29833021
Alignment:
Q  298 aatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatgg 350  Q
    |||||||| ||||| | ||||||||| ||| |||||||| |||||||||||||    
T  29832969 aatgagtgaatgtcagaatgacccatcaacagaataatgagaaaccctaatgg 29833021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 129; Significance: 1e-66; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 284 - 443
Target Start/End: Complemental strand, 10733765 - 10733608
Alignment:
Q  284 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaat 383  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||  ||||| |||||||||||||    
T  10733765 gttgatatggacttaatgagtggatgtccggatggcccattaacggaataatgggaaaccctaatggccatccaatata--agaggctatggtccccaat 10733668  T
Q  384 acactgtacacggcaaactctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  10733667 acaccgtacacggcaaactctctcttctccccatctgaagagaatttgaggcataaaggt 10733608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 284 - 443
Target Start/End: Complemental strand, 10739752 - 10739595
Alignment:
Q  284 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaat 383  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||| |||||||||||||    
T  10739752 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggccatccaatata--agaggctatggtccccaat 10739655  T
Q  384 acactgtacacggcaaactctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    |||| |||||||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  10739654 acaccgtacacggtaaactctctcttctccccatctgaagagaatttgaggcataaaggt 10739595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 284 - 443
Target Start/End: Complemental strand, 10947534 - 10947377
Alignment:
Q  284 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaat 383  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||  ||||| |||||||||||||    
T  10947534 gttgatatggacttaatgagtggatgtccggatggcccattaacggaataatgggaaaccctaatggccatccaatata--agaggctatggtccccaat 10947437  T
Q  384 acactgtacacggcaaactctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  10947436 acaccgtacacggcaaactctctcttctccccatctgaagagaatttgaggcataaaggt 10947377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 284 - 443
Target Start/End: Complemental strand, 10953521 - 10953364
Alignment:
Q  284 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaat 383  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||| |||||||||||||    
T  10953521 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggccatccaatata--agaggctatggtccccaat 10953424  T
Q  384 acactgtacacggcaaactctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    |||| |||||||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  10953423 acaccgtacacggtaaactctctcttctccccatctgaagagaatttgaggcataaaggt 10953364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 284 - 443
Target Start/End: Original strand, 48166922 - 48167082
Alignment:
Q  284 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaat 383  Q
    ||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||    
T  48166922 gttgatatggactcaatgagtggatgttcggatggcccattaacggaataatgggaaaccctaatggccatccaatataaaagaggctatggtccccaat 48167021  T
Q  384 acactgtacacggcaa-actctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    | || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  48167022 ataccgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggt 48167082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 284 - 443
Target Start/End: Complemental strand, 26957219 - 26957059
Alignment:
Q  284 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaat 383  Q
    ||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||| ||||||| ||||| |||||||||||||    
T  26957219 gttgatatggactcaatgagtggatgtccggatggctcattaacggaataatgggaaaccctaatggccatcaaatataaaagaggctatggtccccaat 26957120  T
Q  384 acactgtacacggcaa-actctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    | || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  26957119 ataccgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggt 26957059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 284 - 443
Target Start/End: Original strand, 48160703 - 48160863
Alignment:
Q  284 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaat 383  Q
    ||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||||| ||| ||||||| ||||| |||||||||||||    
T  48160703 gttgatatggactcaatgagtggatgttcggatggcccattaacggaataatgggaaaccctaatggccatcaaatataaaagaggctatggtccccaat 48160802  T
Q  384 acactgtacacggcaa-actctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    | || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  48160803 ataccgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggt 48160863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 285 - 443
Target Start/End: Complemental strand, 6257619 - 6257461
Alignment:
Q  285 ttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaata 384  Q
    ||||||||| || ||||||||||| |||||||| ||||||||||||||||||| ||||||||||||  ||||||||||| ||||| ||||||||||||||    
T  6257619 ttgatatgggctcaatgagtggatatccggatggcccattaacggaataatgg-aaaccctaatggtcatccaatataaaagaggctatggtccccaata 6257521  T
Q  385 cactgtacacggcaa-actctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  6257520 caccgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggt 6257461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 284 - 443
Target Start/End: Original strand, 24287729 - 24287890
Alignment:
Q  284 gttgatatggacttaa--tgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtcccca 381  Q
    ||||||||||||| ||  |||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||| ||||| ||| |||||||    
T  24287729 gttgatatggactcaacatgagtggatgtccggatggcccattaacggaataatgggaaaccctaatggtcatccaatataaaagaggctat-gtcccca 24287827  T
Q  382 atacactgtacacggcaa-actctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  24287828 atacaccgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggt 24287890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 284 - 443
Target Start/End: Original strand, 50168339 - 50168498
Alignment:
Q  284 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaat 383  Q
    ||||||||||||| |||||||||||| ||| |||||||||||||| |||||||| ||||||||||||  || |||||||| ||||| |||||||||||||    
T  50168339 gttgatatggactcaatgagtggatgaccgaatgacccattaacgaaataatggaaaaccctaatggtcattcaatataaaagaggctatggtccccaat 50168438  T
Q  384 acactgtacacggcaaactctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    |||| |||||||  ||||||||| ||||| ||||||||||||||||||||||||||||||    
T  50168439 acaccgtacacgcaaaactctcttttctctccatctgaagagaacttgaggcataaaggt 50168498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 284 - 430
Target Start/End: Complemental strand, 26971970 - 26971824
Alignment:
Q  284 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaat 383  Q
    ||||||||||||| |||||||||||||| |||||  |||||||||||||||||| ||||||||||||| ||||||||||| ||||  |||||||||||||    
T  26971970 gttgatatggactcaatgagtggatgtctggatggtccattaacggaataatgg-aaaccctaatggccatccaatataaaagagactatggtccccaat 26971872  T
Q  384 acactgtacacggcaa-actctctcttctccccatctgaagagaactt 430  Q
    | || ||||||||||| |||||||||||||||||||||||||||||||    
T  26971871 ataccgtacacggcaatactctctcttctccccatctgaagagaactt 26971824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 304 - 443
Target Start/End: Complemental strand, 33461787 - 33461648
Alignment:
Q  304 tggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaatacactgtacacggcaaactc 403  Q
    |||||||||||||||| ||||||||| ||||||||||||||| |||   ||||||||||| ||||| |||||||||||||| || |||||||| ||||||    
T  33461787 tggatgtccggatgactcattaacgggataatgggaaaccctgatgatcatccaatataaaagaggctatggtccccaatataccgtacacggtaaactc 33461688  T
Q  404 tctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  33461687 tctcttctccccatctgaaaagaacttgaggcataaaggt 33461648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 304 - 443
Target Start/End: Complemental strand, 33458662 - 33458523
Alignment:
Q  304 tggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaatacactgtacacggcaaactc 403  Q
    |||||||| ||||| |||||||||| ||||||| |||||||||| ||  ||||||||||| ||||| |||||||||||||| || ||||||| ||||||     
T  33458662 tggatgtctggatggcccattaacgaaataatgcgaaaccctaacggtcatccaatataaaagaggctatggtccccaatataccgtacacgacaaactt 33458563  T
Q  404 tctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  33458562 tctcttctccccatctgaagagaacttgaggcataaaggt 33458523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 284 - 440
Target Start/End: Complemental strand, 44832030 - 44831878
Alignment:
Q  284 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaat 383  Q
    ||||||||||||| |||||||| |||||||||||  |||||||||||||||| ||||||||||||||  ||||||||||| ||||| |||||||||||||    
T  44832030 gttgatatggactcaatgagtgcatgtccggatggtccattaacggaataattggaaaccctaatggtcatccaatataaaagaggctatggtccccaat 44831931  T
Q  384 acactgtacacggcaaactctctcttctccccatctgaagagaacttgaggcataaa 440  Q
    | || | ||||    ||||||||||||||| |||| |||||||||||||||||||||    
T  44831930 ataccgaacac----aactctctcttctccgcatccgaagagaacttgaggcataaa 44831878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 330 - 441
Target Start/End: Original strand, 49976382 - 49976488
Alignment:
Q  330 aataatgggaaaccctaatggctatccaatataatagaggttatggtccccaatacactgtacacggcaaactctctcttctccccatctgaagagaact 429  Q
    |||||||| ||||||||||||| ||||||||||| ||||||||||||| |||     | |||||||||||||||||||||||||||||||||||||||||    
T  49976382 aataatggaaaaccctaatggccatccaatataaaagaggttatggtctcca-----ccgtacacggcaaactctctcttctccccatctgaagagaact 49976476  T
Q  430 tgaggcataaag 441  Q
    ||||||||||||    
T  49976477 tgaggcataaag 49976488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 301 - 443
Target Start/End: Original strand, 50155719 - 50155862
Alignment:
Q  301 gagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaatacactgtacacggcaaa 400  Q
    |||||||||||||||||| ||||||||| | ||||| |||||| |||||   ||||||||||| ||| ||||||||||||||||||| |||||||  |||    
T  50155719 gagtggatgtccggatgatccattaacgaactaatgagaaaccataatgatcatccaatataaaagaagttatggtccccaatacaccgtacacgcaaaa 50155818  T
Q  401 ctctctc-ttctccccatctgaagagaacttgaggcataaaggt 443  Q
    ||||||| |||||| |||||||| ||||||| ||||||||||||    
T  50155819 ctctctctttctcctcatctgaaaagaacttaaggcataaaggt 50155862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 288 - 440
Target Start/End: Complemental strand, 17627186 - 17627039
Alignment:
Q  288 atatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaatacac 387  Q
    ||||||||| |||||| ||||||| ||||||||||||||||||||||| | |||||||||||| | |  ||||||| |||||  ||| ||||||||||||    
T  17627186 atatggactcaatgaggggatgtcaggatgacccattaacggaataattgaaaaccctaatggttgttaaatataaaagaggccatgatccccaatacac 17627087  T
Q  388 tgtacacggcaaactctctcttctccccatctgaagagaacttgaggcataaa 440  Q
     ||||||     ||  |||||||||||||||||||||||||| || |||||||    
T  17627086 agtacac-----acattctcttctccccatctgaagagaactagaagcataaa 17627039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 301 - 440
Target Start/End: Original strand, 35177557 - 35177697
Alignment:
Q  301 gagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaatacactgtacacggcaaa 400  Q
    ||||| ||||| |||||||| ||||| ||||||||| |||||||||||||  ||||||||||| ||||||||| |||| |||||||| ||||||  |||     
T  35177557 gagtgtatgtctggatgacctattaaaggaataatgagaaaccctaatggtcatccaatataaaagaggttatagtcctcaatacaccgtacacaacaat 35177656  T
Q  401 ctctc-tcttctccccatctgaagagaacttgaggcataaa 440  Q
       || |  ||||| ||||||||||||||||||||||||||    
T  35177657 aaatcatggtctcctcatctgaagagaacttgaggcataaa 35177697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 353 - 441
Target Start/End: Original strand, 4632194 - 4632283
Alignment:
Q  353 atccaatataatagaggttatggtccccaatacactgtacacggcaa-actctctcttctccccatctgaagagaacttgaggcataaag 441  Q
    ||||||||||| |||||||||||||||||||| || ||||| | ||| ||| |||||||| | |||||||||||||||||||||||||||    
T  4632194 atccaatataaaagaggttatggtccccaatatacagtacatgacaatactttctcttcttctcatctgaagagaacttgaggcataaag 4632283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 285 - 439
Target Start/End: Complemental strand, 19686732 - 19686581
Alignment:
Q  285 ttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaata 384  Q
    |||||||| ||| ||  |||||||||| |||||||||||||||| ||||||| ||||||||| || | ||||||||||| ||||  ||| || | |||||    
T  19686732 ttgatatgaactcaagcagtggatgtctggatgacccattaacgaaataatgagaaaccctactgaccatccaatataaaagagactatagt-ctcaata 19686634  T
Q  385 cactgtacacggcaaactctctcttctccccatctgaagagaacttgaggcataa 439  Q
    ||    ||| ||||||||||||||||||| ||||  ||||||| |||||||||||    
T  19686633 ca--tcacaaggcaaactctctcttctcctcatcccaagagaaattgaggcataa 19686581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 286 - 422
Target Start/End: Original strand, 9237128 - 9237262
Alignment:
Q  286 tgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatc-caatataatagaggttatggtccccaata 384  Q
    |||||||||||  ||||||||||||| |||||||| |||||||| ||||| ||||||| ||||| | ||| || ||||  ||||| |||| | |||||||    
T  9237128 tgatatggactctatgagtggatgtctggatgaccaattaacgggataat-ggaaaccttaatgaccatcacactata--agaggctatgattcccaata 9237224  T
Q  385 cactgtacacggcaaactctctcttctccccatctgaa 422  Q
    || |||||||| |||||||| | |||| ||||| ||||    
T  9237225 cattgtacacgacaaactctttgttcttcccatttgaa 9237262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 189 - 226
Target Start/End: Complemental strand, 6257715 - 6257678
Alignment:
Q  189 ctatttatcaattgtgaaccttagttgattagtgatca 226  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  6257715 ctatttatcaattgtgagccttagttgattagtgatca 6257678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 189 - 226
Target Start/End: Complemental strand, 10733860 - 10733823
Alignment:
Q  189 ctatttatcaattgtgaaccttagttgattagtgatca 226  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  10733860 ctatttatcaattgtgagccttagttgattagtgatca 10733823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 189 - 226
Target Start/End: Complemental strand, 10739847 - 10739810
Alignment:
Q  189 ctatttatcaattgtgaaccttagttgattagtgatca 226  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  10739847 ctatttatcaattgtgagccttagttgattagtgatca 10739810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 189 - 226
Target Start/End: Complemental strand, 10947629 - 10947592
Alignment:
Q  189 ctatttatcaattgtgaaccttagttgattagtgatca 226  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  10947629 ctatttatcaattgtgagccttagttgattagtgatca 10947592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 189 - 226
Target Start/End: Complemental strand, 10953616 - 10953579
Alignment:
Q  189 ctatttatcaattgtgaaccttagttgattagtgatca 226  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  10953616 ctatttatcaattgtgagccttagttgattagtgatca 10953579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 299 - 348
Target Start/End: Original strand, 28704291 - 28704340
Alignment:
Q  299 atgagtggatgtccggatgacccattaacggaataatgggaaaccctaat 348  Q
    ||||||||||||| ||||||| ||||||| |||||||| |||||||||||    
T  28704291 atgagtggatgtctggatgactcattaactgaataatgagaaaccctaat 28704340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 226
Target Start/End: Original strand, 48160608 - 48160645
Alignment:
Q  189 ctatttatcaattgtgaaccttagttgattagtgatca 226  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  48160608 ctatttatcaattgtgggccttagttgattagtgatca 48160645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 226
Target Start/End: Original strand, 48166827 - 48166864
Alignment:
Q  189 ctatttatcaattgtgaaccttagttgattagtgatca 226  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  48166827 ctatttatcaattgtgggccttagttgattagtgatca 48166864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 128; Significance: 5e-66; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 284 - 443
Target Start/End: Complemental strand, 3811584 - 3811425
Alignment:
Q  284 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaat 383  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||| ||||| |||||||||||||    
T  3811584 gttgatatggactcaatgagtggatgtccggatggcccattaacggaataatgggaaaccctaatggtcatccaatataaaagaggctatggtccccaat 3811485  T
Q  384 acactgtacacggcaaactctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    | || |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3811484 ataccgtacacggcaaactctctcttctccccatctgaagagaacttgaggcataaaggt 3811425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 284 - 443
Target Start/End: Complemental strand, 3817726 - 3817567
Alignment:
Q  284 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaat 383  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||| ||||| |||||||||||||    
T  3817726 gttgatatggactcaatgagtggatgtccggatggcccattaacggaataatgggaaaccctaatggtcatccaatataaaagaggctatggtccccaat 3817627  T
Q  384 acactgtacacggcaaactctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    | || |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3817626 ataccgtacacggcaaactctctcttctccccatctgaagagaacttgaggcataaaggt 3817567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 284 - 443
Target Start/End: Complemental strand, 28421376 - 28421215
Alignment:
Q  284 gttgatatggacttaa--tgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtcccca 381  Q
    ||||||||||||| ||  |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||    
T  28421376 gttgatatggactcaacatgagtggatgtccggatggcccattaacggaataatgggaaaccctaatggccatccaatataaaagaggctatggtcccca 28421277  T
Q  382 atacactgtacacggcaaactctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28421276 atacaccgtacacggcaaactctctcttctccccatctgaagagaacttgaggcataaaggt 28421215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 284 - 443
Target Start/End: Original strand, 351531 - 351690
Alignment:
Q  284 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaat 383  Q
    ||||||||||||| |||||||||||||||||||| |||||||  |||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||    
T  351531 gttgatatggactcaatgagtggatgtccggatggcccattactggaataatgggaaaccctaatggccatccaatataaaagaggctatggtccccaat 351630  T
Q  384 acactgtacacggcaaactctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    | || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  351631 ataccgtacacgacaaactctctcttctccccatctgaagagaacttgaggcataaaggt 351690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 284 - 443
Target Start/End: Original strand, 339125 - 339283
Alignment:
Q  284 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaat 383  Q
    ||||||||||||| |||||||||||||||||||| |||||||  |||||||||||||||| ||||||| ||||||||||| |||||| ||||||||||||    
T  339125 gttgatatggactcaatgagtggatgtccggatggcccattactggaataatgggaaacc-taatggccatccaatataaaagaggtcatggtccccaat 339223  T
Q  384 acactgtacacggcaaactctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    | || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  339224 ataccgtacacgacaaactctctcttctccccatctgaagagaacttgaggcataaaggt 339283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 284 - 443
Target Start/End: Complemental strand, 35148424 - 35148265
Alignment:
Q  284 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaat 383  Q
    ||||||||||||| |||||||||||||||||||| | ||||||| |||||||||||||| |||||||| ||||||||||| ||||| |||| ||||||||    
T  35148424 gttgatatggactcaatgagtggatgtccggatggctcattaacagaataatgggaaactctaatggccatccaatataaaagaggctatgatccccaat 35148325  T
Q  384 acactgtacacggcaaactctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    |||| ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  35148324 acaccgtacatggcaaactctctcttctccccatctgaagagaatttgaggcataaaggt 35148265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 284 - 443
Target Start/End: Complemental strand, 22742345 - 22742185
Alignment:
Q  284 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaat 383  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||  ||||||| |||||    
T  22742345 gttgatatggactcaatgagtggatgtccggatggcccattaacggaataatgggaaaccctaatggccatccaatataaaagagactatggtctccaat 22742246  T
Q  384 acactgtacacggc-aaactctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    | || ||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  22742245 ataccgtacatggcaaaactctctcttctcccaatctgaagagaacttgaggcataaaggt 22742185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 288 - 440
Target Start/End: Original strand, 26383417 - 26383569
Alignment:
Q  288 atatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaatacac 387  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||||||| ||||| ||||||||| |||||||    
T  26383417 atatggactcaatgagtggatgtccggatgacccattaatggaataatgggaaaccctaatggtcatccaatataaaagaggctatggtccctaatacac 26383516  T
Q  388 tgtacacggcaaactctctcttctccccatctgaagagaacttgaggcataaa 440  Q
     | |||||||||||||||||||||||| || ||||||||||||||||||||||    
T  26383517 cggacacggcaaactctctcttctccctatttgaagagaacttgaggcataaa 26383569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 284 - 443
Target Start/End: Original strand, 5849274 - 5849433
Alignment:
Q  284 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaat 383  Q
    ||||||||||||| ||||||||||||| ||||||  ||||||||||||||||| |||||| ||||||  ||||||||||| ||||| |||||||| ||||    
T  5849274 gttgatatggactcaatgagtggatgttcggatggtccattaacggaataatgagaaaccttaatggtcatccaatataaaagaggctatggtcctcaat 5849373  T
Q  384 acactgtacacggcaaactctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    | || |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  5849374 ataccgtacacggcaaactctcttttctccccatctgaagataacttgaggcataaaggt 5849433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 285 - 443
Target Start/End: Original strand, 43539722 - 43539883
Alignment:
Q  285 ttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaata 384  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||||| || ||||||||||||  | ||||||||| ||||||||||||||||||||    
T  43539722 ttgatatggactcaatgagtggatgtctggatgacccattaacggaataacggaaaaccctaatggtcacccaatataaaagaggttatggtccccaata 43539821  T
Q  385 cactgtacacggcaaactctctcttctc---cccatctgaagagaacttgaggcataaaggt 443  Q
     || || |||||||||||||||||||||   |||||||||||||||||| ||||||||||||    
T  43539822 taccgtgcacggcaaactctctcttctccttcccatctgaagagaactttaggcataaaggt 43539883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 324 - 440
Target Start/End: Original strand, 15843730 - 15843847
Alignment:
Q  324 taacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaatacactg-tacacggcaaactctctcttctccccatctgaa 422  Q
    ||||||||||||||||||| |||||||  ||||||||||| ||||||||||||| ||||||||| | ||||||||||||||||| |||||||||||||||    
T  15843730 taacggaataatgggaaactctaatggtcatccaatataaaagaggttatggtctccaatacaccggtacacggcaaactctctattctccccatctgaa 15843829  T
Q  423 gagaacttgaggcataaa 440  Q
    ||||||||||||||||||    
T  15843830 gagaacttgaggcataaa 15843847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 324 - 440
Target Start/End: Original strand, 15860839 - 15860956
Alignment:
Q  324 taacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaatacactg-tacacggcaaactctctcttctccccatctgaa 422  Q
    ||||||||||||||||||| |||||||  ||||||||||| ||||||||||||| ||||||||| | ||||||||||||||||| |||||||||||||||    
T  15860839 taacggaataatgggaaactctaatggtcatccaatataaaagaggttatggtctccaatacaccggtacacggcaaactctctattctccccatctgaa 15860938  T
Q  423 gagaacttgaggcataaa 440  Q
    ||||||||||||||||||    
T  15860939 gagaacttgaggcataaa 15860956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 304 - 440
Target Start/End: Complemental strand, 5979571 - 5979433
Alignment:
Q  304 tggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaata-taatagaggttatggtccccaatacactgtacacggcaa-ac 401  Q
    ||||||| |||||| || |||||| |||||||||||||  |||||||  |||||||| ||| ||||||||||||||||||||||| ||||||| ||| ||    
T  5979571 tggatgttcggatggccaattaacagaataatgggaaagtctaatggtcatccaataataaaagaggttatggtccccaatacaccgtacacgacaatac 5979472  T
Q  402 tctctcttctccccatctgaagagaacttgaggcataaa 440  Q
    |||||||||||||||||||||||||||||||||||||||    
T  5979471 tctctcttctccccatctgaagagaacttgaggcataaa 5979433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 284 - 379
Target Start/End: Complemental strand, 35152944 - 35152849
Alignment:
Q  284 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccc 379  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||| |||||||||    
T  35152944 gttgatatggactcaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggtcatccaatataaaagaggctatggtccc 35152849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 353 - 443
Target Start/End: Original strand, 20238763 - 20238854
Alignment:
Q  353 atccaatataatagaggttatggtccccaatacactgtacacggcaa-actctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    ||||||||||| ||||| |||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  20238763 atccaatataaaagaggctatggtccccaatataccgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggt 20238854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 284 - 387
Target Start/End: Original strand, 7608171 - 7608274
Alignment:
Q  284 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaat 383  Q
    ||||||||||  ||||||||||||||||||||||||||||||| | |||||||  ||||||||||| | ||||||||||| ||| |||||||||||||||    
T  7608171 gttgatatggggttaatgagtggatgtccggatgacccattaatgaaataatgaaaaaccctaatgaccatccaatataaaagatgttatggtccccaat 7608270  T
Q  384 acac 387  Q
    ||||    
T  7608271 acac 7608274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 375 - 443
Target Start/End: Complemental strand, 35150865 - 35150797
Alignment:
Q  375 gtccccaatacactgtacacggcaaactctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  35150865 gtccccaatacaccgtacatggcaaactctctcttctccccatctgaagagaacttgaggcataaaggt 35150797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 284 - 399
Target Start/End: Complemental strand, 42767618 - 42767505
Alignment:
Q  284 gttgatatggactt-aatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaa 382  Q
    |||||||||||||| |||||||||||||| |||||| |||||||||||||||| ||||||||||||||| ||   |||||| ||||| ||||||||| ||    
T  42767618 gttgatatggacttcaatgagtggatgtctggatgatccattaacggaataataggaaaccctaatggccat---atataaaagaggctatggtcccgaa 42767522  T
Q  383 tacactgtacacggcaa 399  Q
    || || |||||||||||    
T  42767521 tataccgtacacggcaa 42767505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 285 - 443
Target Start/End: Original strand, 26380837 - 26380987
Alignment:
Q  285 ttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaata 384  Q
    |||||||| ||| |||||||| |||||||||||||||||       ||||||||||| | ||||||  ||||||||||| |||| | |||||||||| ||    
T  26380837 ttgatatgaactcaatgagtgcatgtccggatgacccat-------ataatgggaaatcttaatggtcatccaatataaaagagct-atggtccccagta 26380928  T
Q  385 cactgtacacggcaaactctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    ||    ||||| |||||||||||||||||| ||||||||| ||||| ||||||||||||    
T  26380929 catcagacacgacaaactctctcttctcccgatctgaagaaaactttaggcataaaggt 26380987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 288 - 429
Target Start/End: Complemental strand, 18657062 - 18656923
Alignment:
Q  288 atatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatc-caatataatagaggttatggtccccaataca 386  Q
    |||||||||  ||||||||||||| ||||||||||||||   |||||||| ||| ||||||||| ||| || | ||  ||||| ||| ||| ||||| ||    
T  18657062 atatggactctatgagtggatgtctggatgacccattaatacaataatggtaaatcctaatggc-atcacactgta--agaggctattgtctccaatgca 18656966  T
Q  387 ctgtacacggcaaactctctcttctccccatctgaagagaact 429  Q
    |  |||||| |||||| ||||||||| || |||||||||||||    
T  18656965 ccatacacgacaaactttctcttctctccgtctgaagagaact 18656923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 189 - 226
Target Start/End: Original strand, 26380757 - 26380794
Alignment:
Q  189 ctatttatcaattgtgaaccttagttgattagtgatca 226  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  26380757 ctatttatcaattgtgagccttagttgattagtgatca 26380794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 189 - 226
Target Start/End: Original strand, 26383318 - 26383355
Alignment:
Q  189 ctatttatcaattgtgaaccttagttgattagtgatca 226  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  26383318 ctatttatcaattgtgagccttagttgattagtgatca 26383355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 190 - 226
Target Start/End: Original strand, 5849180 - 5849216
Alignment:
Q  190 tatttatcaattgtgaaccttagttgattagtgatca 226  Q
    |||||||||||||||| ||||||||||||||||||||    
T  5849180 tatttatcaattgtgagccttagttgattagtgatca 5849216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 190 - 226
Target Start/End: Complemental strand, 35153038 - 35153002
Alignment:
Q  190 tatttatcaattgtgaaccttagttgattagtgatca 226  Q
    |||||||||||||||| ||||||||||||||||||||    
T  35153038 tatttatcaattgtgagccttagttgattagtgatca 35153002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 226
Target Start/End: Original strand, 339030 - 339067
Alignment:
Q  189 ctatttatcaattgtgaaccttagttgattagtgatca 226  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  339030 ctatttatcaattgtcagccttagttgattagtgatca 339067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 226
Target Start/End: Original strand, 351436 - 351473
Alignment:
Q  189 ctatttatcaattgtgaaccttagttgattagtgatca 226  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  351436 ctatttatcaattgtcagccttagttgattagtgatca 351473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 440
Target Start/End: Original strand, 3677876 - 3677925
Alignment:
Q  391 acacggcaaactctctcttctccccatctgaagagaacttgaggcataaa 440  Q
    ||||| |||||  ||||||||| |||||||||||||| ||||||||||||    
T  3677876 acacgacaaacattctcttctctccatctgaagagaaattgaggcataaa 3677925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 226
Target Start/End: Complemental strand, 3811679 - 3811642
Alignment:
Q  189 ctatttatcaattgtgaaccttagttgattagtgatca 226  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  3811679 ctatttatcaattgtgggccttagttgattagtgatca 3811642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 353 - 386
Target Start/End: Original strand, 15843693 - 15843726
Alignment:
Q  353 atccaatataatagaggttatggtccccaataca 386  Q
    ||||||||||| ||||||||||||||||||||||    
T  15843693 atccaatataaaagaggttatggtccccaataca 15843726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 353 - 386
Target Start/End: Original strand, 15860802 - 15860835
Alignment:
Q  353 atccaatataatagaggttatggtccccaataca 386  Q
    ||||||||||| ||||||||||||||||||||||    
T  15860802 atccaatataaaagaggttatggtccccaataca 15860835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 226
Target Start/End: Complemental strand, 28421469 - 28421432
Alignment:
Q  189 ctatttatcaattgtgaaccttagttgattagtgatca 226  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  28421469 ctatttatcaattgtgagccttaattgattagtgatca 28421432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 226
Target Start/End: Complemental strand, 35148519 - 35148482
Alignment:
Q  189 ctatttatcaattgtgaaccttagttgattagtgatca 226  Q
    ||||||||||||| ||| ||||||||||||||||||||    
T  35148519 ctatttatcaattatgagccttagttgattagtgatca 35148482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 125; Significance: 3e-64; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 284 - 443
Target Start/End: Complemental strand, 8651219 - 8651059
Alignment:
Q  284 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaat 383  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||| ||||| |||||||||||||    
T  8651219 gttgatatggacttaatgagtggatgtccggatggcccattaacggaataatgggaaaccctaatggtcatccaatataaaagaggctatggtccccaat 8651120  T
Q  384 acactgtacacggcaa-actctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    | || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  8651119 ataccgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggt 8651059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 284 - 443
Target Start/End: Complemental strand, 21783741 - 21783580
Alignment:
Q  284 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatg--gtcccca 381  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||  |||||||    
T  21783741 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggc-atccaatataaaagaggctatggtgtcccca 21783643  T
Q  382 atacactgtacacggc-aaactctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  21783642 atacaccgtacacggcaaaactctctcttctccccatctgaagagaacttgaggcataaaggt 21783580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 284 - 443
Target Start/End: Complemental strand, 21789964 - 21789803
Alignment:
Q  284 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatg--gtcccca 381  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||  |||||||    
T  21789964 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggc-atccaatataaaagaggctatggtgtcccca 21789866  T
Q  382 atacactgtacacggc-aaactctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  21789865 atacaccgtacacggcaaaactctctcttctccccatctgaagagaacttgaggcataaaggt 21789803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 284 - 443
Target Start/End: Complemental strand, 4580739 - 4580577
Alignment:
Q  284 gttgatatggacttaa--tgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtcccca 381  Q
    ||||||||||||| ||  ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||| |||||||||||    
T  4580739 gttgatatggactcaacatgagtggatgtccggatgacccattaatggaataatgggaaaccctaatggccatccaatataaaagaggctatggtcccca 4580640  T
Q  382 atacactgtacacggcaa-actctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  4580639 atacaccgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggt 4580577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 284 - 443
Target Start/End: Complemental strand, 21770980 - 21770823
Alignment:
Q  284 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaat 383  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||| ||||| || ||||||||||    
T  21770980 gttgatatggacttaatgagtggatgtccggatgacc-attaacggaataatgggaaaccctaatggccaaccaatataaaagaggctacggtccccaat 21770882  T
Q  384 acactgtacacggc-aaactctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    |||| ||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||    
T  21770881 acaccgtacacggcaaaactctctcttct--ccatctgaagagaacttgaggcataaaggt 21770823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 284 - 443
Target Start/End: Complemental strand, 31756634 - 31756476
Alignment:
Q  284 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaat 383  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||    
T  31756634 gttgatatggactcaatgagtggatgtccggatgacccattaa-ggaataatgggaaaccctaatggccatccaatataaaagaggctatggtccccaat 31756536  T
Q  384 acactgtacacggcaaactctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    | |    ||||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  31756535 atatcaaacacgacaaactctctcttctccccatctgaagagaacttgaggtataaaggt 31756476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 284 - 443
Target Start/End: Original strand, 25353953 - 25354115
Alignment:
Q  284 gttgatatggacttaa--tgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtcccca 381  Q
    ||||||||||||| ||  ||||||||| |||||||| |||||||||||||||||||||||| |||||||  ||| ||||||| ||||| |||||||||||    
T  25353953 gttgatatggactcaacatgagtggatatccggatggcccattaacggaataatgggaaactctaatggtcatctaatataaaagaggctatggtcccca 25354052  T
Q  382 atacactgtacacggcaa-actctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    |||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  25354053 atacaccgtacacgacaatactctctcttctccccatctgaagagaacttgaggcataaaggt 25354115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 284 - 441
Target Start/End: Complemental strand, 21197456 - 21197288
Alignment:
Q  284 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaat 383  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||| ||||| |||||||||||||    
T  21197456 gttgatatggactcaatgagtggatgtccggatggcccattaacggaataatgggaaaacctaatggccatccaatataaaagaggctatggtccccaat 21197357  T
Q  384 acactgtacacggcaa-----------actctctcttctccccatctgaagagaacttgaggcataaag 441  Q
    | || |||||||||||           ||||||||||||||||||||||||||||||||||||||||||    
T  21197356 ataccgtacacggcaatactcggcaatactctctcttctccccatctgaagagaacttgaggcataaag 21197288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 284 - 443
Target Start/End: Original strand, 25343367 - 25343528
Alignment:
Q  284 gttgatatggacttaa--tgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtcccca 381  Q
    ||||||||||||| ||  ||||||||||| ||||||  |||||||||||||||||||||||||||||||  ||||||||||| ||||| ||| |||||||    
T  25343367 gttgatatggactcaacatgagtggatgttcggatggtccattaacggaataatgggaaaccctaatggtcatccaatataaaagaggctat-gtcccca 25343465  T
Q  382 atacactgtacacggcaa-actctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    |||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  25343466 atacaccgtacacgacaatactctctcttctccccatctgaagagaacttgaggcataaaggt 25343528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 284 - 432
Target Start/End: Complemental strand, 21191285 - 21191136
Alignment:
Q  284 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaat 383  Q
    ||||||||||| | ||||||||||||| |||||| |||||||||||||||||| |||||| ||||||| ||||||||||| ||||| |||||||||||||    
T  21191285 gttgatatggattcaatgagtggatgttcggatggcccattaacggaataatgtgaaaccataatggccatccaatataaaagaggctatggtccccaat 21191186  T
Q  384 acactgtacacggcaa-actctctcttctccccatctgaagagaacttga 432  Q
    | ||  |||||||||| |||||||||||||||||||||||||||||||||    
T  21191185 ataccttacacggcaatactctctcttctccccatctgaagagaacttga 21191136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 288 - 440
Target Start/End: Original strand, 17581384 - 17581533
Alignment:
Q  288 atatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaatacac 387  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||  |  |||||||||| ||||| ||||||||||||   ||    
T  17581384 atatggactcaatgagtggatgtccggatgacccattaacggaataatgggaaa-cctaataaccgtccaatataaaagaggctatggtccccaa---ac 17581479  T
Q  388 tgtacacggc-aaactctctcttctccccatctgaagagaacttgaggcataaa 440  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  17581480 tgtacacgacaaaactctctcttctccccatctgaagagaacttgaggcataaa 17581533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 284 - 440
Target Start/End: Complemental strand, 30905996 - 30905841
Alignment:
Q  284 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaat 383  Q
    |||||||||||||  |||||| |||||| |||||| || ||||| ||||||||||||||| ||||||  ||||||||||| ||||| |||||| ||||||    
T  30905996 gttgatatggactctatgagtagatgtctggatgatcctttaacagaataatgggaaaccataatggtcatccaatataaaagaggctatggttcccaat 30905897  T
Q  384 acactgtacacggcaaactctctcttctccccatctgaagagaacttgaggcataaa 440  Q
    |||| |||| || |||||||||||||| |||||||||||||||||||||||||||||    
T  30905896 acaccgtactcgacaaactctctcttc-ccccatctgaagagaacttgaggcataaa 30905841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 303 - 423
Target Start/End: Original strand, 28728047 - 28728166
Alignment:
Q  303 gtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaatacactgtacacggcaaact 402  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||| |||| ||||||| |||| |||||||||||||| || |||||| |||||      
T  28728047 gtggatgtccggatggtccattaacggaataatgggaaaccctaatggccatcctatataat-gaggctatggtccccaatataccgtacacagcaaaac 28728145  T
Q  403 ctctcttctccccatctgaag 423  Q
    | |||||||||||||||||||    
T  28728146 cgctcttctccccatctgaag 28728166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 288 - 433
Target Start/End: Original strand, 1106062 - 1106206
Alignment:
Q  288 atatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaatacac 387  Q
    ||||||| | |||||||||||||||||||||| |||||||| |||||||| ||||| |||||   ||  | |||||  |||| |||||||||||||  ||    
T  1106062 atatggattcaatgagtggatgtccggatgactcattaacgaaataatggaaaaccgtaatgatcattgagtataaatgaggatatggtccccaat--ac 1106159  T
Q  388 tgtacacggc-aaactctctcttctccccatctgaagagaacttgag 433  Q
    |||||||| | ||||| ||||||||||| || |||||||||||||||    
T  1106160 tgtacacgtcaaaactttctcttctccctatgtgaagagaacttgag 1106206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 299 - 350
Target Start/End: Complemental strand, 12801940 - 12801889
Alignment:
Q  299 atgagtggatgtccggatgacccattaacggaataatgggaaaccctaatgg 350  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  12801940 atgagtggatgtctggatgacccattaatggaataatgggaaaccctaatgg 12801889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 314 - 350
Target Start/End: Complemental strand, 12801681 - 12801645
Alignment:
Q  314 gatgacccattaacggaataatgggaaaccctaatgg 350  Q
    |||||||||||||||||||||||||||||||||||||    
T  12801681 gatgacccattaacggaataatgggaaaccctaatgg 12801645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 224
Target Start/End: Original strand, 25343276 - 25343311
Alignment:
Q  189 ctatttatcaattgtgaaccttagttgattagtgat 224  Q
    ||||||||||||||||||||||| ||||||||||||    
T  25343276 ctatttatcaattgtgaaccttaattgattagtgat 25343311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 226
Target Start/End: Complemental strand, 4580832 - 4580795
Alignment:
Q  189 ctatttatcaattgtgaaccttagttgattagtgatca 226  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  4580832 ctatttatcaattgtgagccttaattgattagtgatca 4580795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 226
Target Start/End: Complemental strand, 8651314 - 8651277
Alignment:
Q  189 ctatttatcaattgtgaaccttagttgattagtgatca 226  Q
    |||||||||||||||||  |||||||||||||||||||    
T  8651314 ctatttatcaattgtgagtcttagttgattagtgatca 8651277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 226
Target Start/End: Complemental strand, 21771075 - 21771038
Alignment:
Q  189 ctatttatcaattgtgaaccttagttgattagtgatca 226  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  21771075 ctatttatcaattgtgagccttaattgattagtgatca 21771038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 226
Target Start/End: Original strand, 25353862 - 25353899
Alignment:
Q  189 ctatttatcaattgtgaaccttagttgattagtgatca 226  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  25353862 ctatttatcaattgtgagccttaattgattagtgatca 25353899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 125; Significance: 3e-64; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 284 - 443
Target Start/End: Complemental strand, 25387920 - 25387760
Alignment:
Q  284 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaat 383  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||    
T  25387920 gttgatatggacttaatgagtggatgtccggatggcccattaatggaataatgggaaaccctaatggccatccaatataaaagaggctatggtccccaat 25387821  T
Q  384 acactgtacacggcaa-actctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    | || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  25387820 ataccgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggt 25387760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 284 - 443
Target Start/End: Original strand, 31051288 - 31051448
Alignment:
Q  284 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaat 383  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||    
T  31051288 gttgatatggactcaatgagtggatgtccggatggcccattaacggaataatgggaaaccctaatggccatccaatataaaagaggctatggtccccaat 31051387  T
Q  384 acactgtacacggcaa-actctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    | || ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  31051388 ataccgtacacgacaatactctctcttctccccatctgaagagaacttgaggcataaaggt 31051448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 288 - 443
Target Start/End: Original strand, 44409748 - 44409904
Alignment:
Q  288 atatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaatacac 387  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  44409748 atatggactcaatgagtggatgtccggatggcccattaacggaataatgagaaaccctaatggccatccaatataaaagaggttatggtccccaatacac 44409847  T
Q  388 tgtacacggc-aaactctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    | |||||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  44409848 tatacacgacaaaactctctcttctccccatctgaagagaacttgaggcataaaggt 44409904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 284 - 443
Target Start/End: Original strand, 1077986 - 1078148
Alignment:
Q  284 gttgatatggacttaa--tgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtcccca 381  Q
    ||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||    
T  1077986 gttgatatggactcaacatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggccatccaatataaaagaggctatggtcccca 1078085  T
Q  382 atacactgtacacggcaa-actctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    |||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  1078086 atacaccgtacacggcaatactctctcttctcaccatctgaagagaacttgaggcataaaggt 1078148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 284 - 443
Target Start/End: Original strand, 34739730 - 34739889
Alignment:
Q  284 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaat 383  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||| | |||||||||||    
T  34739730 gttgatatggactcaatgagtggatgtccggatggcccattaacggaataatgggaaaccctaatggccatccaatataaaagaggctgtggtccccaat 34739829  T
Q  384 acactgtacacggcaaactctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    | || ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  34739830 ataccgtacacgacaaactctctcttctcccaatctgaagagaacttgaggcataaaggt 34739889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 284 - 443
Target Start/End: Original strand, 31057788 - 31057948
Alignment:
Q  284 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaat 383  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| ||||| |||| ||||||||    
T  31057788 gttgatatggactcaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggccatacaatataaaagaggctatgatccccaat 31057887  T
Q  384 acactgtacacggcaa-actctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    | || ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  31057888 ataccgtacacgacaatactctctcttctccccatctgaagagaacttgaggcataaaggt 31057948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 284 - 443
Target Start/End: Complemental strand, 25381953 - 25381791
Alignment:
Q  284 gttgatatggacttaa--tgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtcccca 381  Q
    ||||||||||||| ||  |||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||| ||||| |||||||||||    
T  25381953 gttgatatggactcaacatgagtggatgtccggatggcccattaatggaataatgggaaaccctaatggccatccaatataaaagaggctatggtcccca 25381854  T
Q  382 atacactgtacacggcaa-actctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  25381853 atacaccgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggt 25381791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 284 - 443
Target Start/End: Complemental strand, 8093261 - 8093102
Alignment:
Q  284 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaat 383  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |   ||| ||||||| ||||| |||||||||||||    
T  8093261 gttgatatggactcaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaacgatcatcaaatataaaagaggctatggtccccaat 8093162  T
Q  384 acactgtacacggcaaactctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    | || | |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  8093161 ataccgaacacggcaaactctcttttctccccatctgaagagaacttgaggcataaaggt 8093102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 284 - 435
Target Start/End: Original strand, 50305939 - 50306092
Alignment:
Q  284 gttgatatggacttaa--tgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtcccca 381  Q
    ||||||||||||| ||  |||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||| ||||| |||||||||||    
T  50305939 gttgatatggactcaacatgagtggatgtccggatggcccattaacggaataatgggaaaccctaatggtcatccaatataaaagaggctatggtcccca 50306038  T
Q  382 atacactgtacacggcaaactctctcttctccccatctgaagagaacttgaggc 435  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  50306039 atacaccgtacacggcaaattctctcttctccccatctgaagagaacttgaggc 50306092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 287 - 443
Target Start/End: Complemental strand, 24927172 - 24927017
Alignment:
Q  287 gatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaataca 386  Q
    |||||||||| |||| ||||||||| ||||| ||||||||||||||||||||||||||||||||  ||||||||||| ||||| |||||| ||||||||     
T  24927172 gatatggactcaatg-gtggatgtctggatggcccattaacggaataatgggaaaccctaatggtcatccaatataaaagaggctatggttcccaatact 24927074  T
Q  387 ctgtacacggcaaactctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    |  |||  || ||||||||||||||||||||||||||||||||||||||||| ||||    
T  24927073 ccatacgtggaaaactctctcttctccccatctgaagagaacttgaggcatataggt 24927017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 306 - 443
Target Start/End: Complemental strand, 38152356 - 38152220
Alignment:
Q  306 gatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaatacactgtacacggcaaactctc 405  Q
    |||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||| ||||| |||||| |||||||||| ||||||| |||||||      
T  38152356 gatgtccggatgacccattaacggaataatgggaaacc-taatgaccatccaatataaaagaggctatggttcccaatacaccgtacacgacaaactcgt 38152258  T
Q  406 tcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    |||||||||||||| |||| ||||||| ||||||||||    
T  38152257 tcttctccccatctaaagaaaacttgaagcataaaggt 38152220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 287 - 440
Target Start/End: Complemental strand, 24964120 - 24963968
Alignment:
Q  287 gatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaataca 386  Q
    |||||| ||| |||| ||||||||| | ||||||||||||||||| ||||| |||||||||| |  ||| ||||||| ||| | |||| || |||| |||    
T  24964120 gatatgaactcaatgggtggatgtctgaatgacccattaacggaaaaatgg-aaaccctaattgtcatctaatataaaagatgctatgatcaccaagaca 24964022  T
Q  387 ctgtacacggcaaactctctcttctccccatctgaagagaacttgaggcataaa 440  Q
    | |||   ||||||||||||||||||||||||||||||| ||||||||||||||    
T  24964021 ccgtatgtggcaaactctctcttctccccatctgaagaggacttgaggcataaa 24963968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 284 - 443
Target Start/End: Original strand, 27954905 - 27955063
Alignment:
Q  284 gttgatatggacttaat--gagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtcccca 381  Q
    ||||||||||||| |||  ||||||||||  ||||| | |||||  |||||||||||||| | ||||||  ||||||||||| ||| |||||| ||||||    
T  27954905 gttgatatggactcaatatgagtggatgtatggatggctcattagtggaataatgggaaatcataatggtcatccaatataaaagatgttatgatcccca 27955004  T
Q  382 atacactgtacacggcaa-actctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    ||||||   ||||| ||| ||  ||||||||||||||||| ||||||||| || |||||||||    
T  27955005 atacac---acacgacaatacattctcttctccccatctg-agagaacttaagacataaaggt 27955063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 284 - 350
Target Start/End: Complemental strand, 12184029 - 12183961
Alignment:
Q  284 gttgatatggacttaat--gagtggatgtccggatgacccattaacggaataatgggaaaccctaatgg 350  Q
    ||||||||||||| |||  |||| |||||||||||| || ||||||||||||||| |||||||||||||    
T  12184029 gttgatatggactcaatatgagtagatgtccggatggccaattaacggaataatgagaaaccctaatgg 12183961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 188 - 226
Target Start/End: Complemental strand, 4280241 - 4280203
Alignment:
Q  188 actatttatcaattgtgaaccttagttgattagtgatca 226  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  4280241 actatttatcaattgtgaaccttaattgattagtgatca 4280203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 300 - 417
Target Start/End: Complemental strand, 33458308 - 33458192
Alignment:
Q  300 tgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaata-taatagaggttatggtccccaatacactgtacacggca 398  Q
    ||||||||||||||||||| ||||||| | ||||| | |||||||||||| | ||  |||| ||  ||||| |||| |   |||||||||  ||||||||    
T  33458308 tgagtggatgtccggatgatccattaatgaaataacgagaaaccctaatgaccat--aatactataagaggctatgattttcaatacactagacacggca 33458211  T
Q  399 aactctctcttctccccat 417  Q
    ||||||||||||| |||||    
T  33458210 aactctctcttcttcccat 33458192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 226
Target Start/End: Original strand, 1077893 - 1077930
Alignment:
Q  189 ctatttatcaattgtgaaccttagttgattagtgatca 226  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  1077893 ctatttatcaattgtgagccttaattgattagtgatca 1077930  T

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Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 226
Target Start/End: Complemental strand, 25275557 - 25275520
Alignment:
Q  189 ctatttatcaattgtgaaccttagttgattagtgatca 226  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  25275557 ctatttatcaattgtgagccttaattgattagtgatca 25275520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 226
Target Start/End: Complemental strand, 25382046 - 25382009
Alignment:
Q  189 ctatttatcaattgtgaaccttagttgattagtgatca 226  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  25382046 ctatttatcaattgtgagccttaattgattagtgatca 25382009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 226
Target Start/End: Original strand, 31051193 - 31051230
Alignment:
Q  189 ctatttatcaattgtgaaccttagttgattagtgatca 226  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  31051193 ctatttatcaattgtgggccttagttgattagtgatca 31051230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 226
Target Start/End: Original strand, 31057693 - 31057730
Alignment:
Q  189 ctatttatcaattgtgaaccttagttgattagtgatca 226  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  31057693 ctatttatcaattgtgggccttagttgattagtgatca 31057730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 226
Target Start/End: Original strand, 50305846 - 50305883
Alignment:
Q  189 ctatttatcaattgtgaaccttagttgattagtgatca 226  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  50305846 ctatttatcaattgtgagccttaattgattagtgatca 50305883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 284 - 325
Target Start/End: Complemental strand, 25275464 - 25275421
Alignment:
Q  284 gttgatatggacttaa--tgagtggatgtccggatgacccatta 325  Q
    ||||||||||||| ||  ||||||||||||||||||||||||||    
T  25275464 gttgatatggactcaacatgagtggatgtccggatgacccatta 25275421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 226
Target Start/End: Complemental strand, 25388012 - 25387976
Alignment:
Q  190 tatttatcaattgtgaaccttagttgattagtgatca 226  Q
    |||||||||||||||| ||||| ||||||||||||||    
T  25388012 tatttatcaattgtgagccttaattgattagtgatca 25387976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 226
Target Start/End: Complemental strand, 33458419 - 33458383
Alignment:
Q  190 tatttatcaattgtgaaccttagttgattagtgatca 226  Q
    |||||||||||||||| ||||| ||||||||||||||    
T  33458419 tatttatcaattgtgagccttaattgattagtgatca 33458383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 226
Target Start/End: Complemental strand, 38152467 - 38152431
Alignment:
Q  190 tatttatcaattgtgaaccttagttgattagtgatca 226  Q
    |||||||||||||||  ||||||||||||||||||||    
T  38152467 tatttatcaattgtgggccttagttgattagtgatca 38152431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208 (Bit Score: 120; Significance: 3e-61; HSPs: 3)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 284 - 443
Target Start/End: Original strand, 6264 - 6426
Alignment:
Q  284 gttgatatggacttaa--tgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtcccca 381  Q
    ||||||||||||| ||  |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||    
T  6264 gttgatatggactcaacatgagtggatgtccggatggcccattaacggaataatgggaaaccctaatggccatccaatataaaagaggctatggtcccca 6363  T
Q  382 atacactgtacacggcaa-actctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  6364 atacaccgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggt 6426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 284 - 443
Target Start/End: Original strand, 12137 - 12299
Alignment:
Q  284 gttgatatggacttaa--tgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtcccca 381  Q
    ||||||||||||| ||  |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||    
T  12137 gttgatatggactcaacatgagtggatgtccggatggcccattaacggaataatgggaaaccctaatggccatccaatataaaagaggctatggtcccca 12236  T
Q  382 atacactgtacacggcaa-actctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  12237 atacaccgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggt 12299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 226
Target Start/End: Original strand, 12044 - 12081
Alignment:
Q  189 ctatttatcaattgtgaaccttagttgattagtgatca 226  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  12044 ctatttatcaattgtgagccttaattgattagtgatca 12081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 120; Significance: 3e-61; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 284 - 443
Target Start/End: Complemental strand, 173305 - 173146
Alignment:
Q  284 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaat 383  Q
    ||||||||||||| ||||||||||||||||||||  | |||||||||||||||||||||||||||||  ||||||||||| ||||| |||||||||||||    
T  173305 gttgatatggactcaatgagtggatgtccggatgttctattaacggaataatgggaaaccctaatggtcatccaatataaaagaggctatggtccccaat 173206  T
Q  384 acactgtacacggcaaactctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  173205 acaccgtatacggcaaactctctcttctccccatctgaagagaacttgaggcataaaggt 173146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1114 (Bit Score: 97; Significance: 2e-47; HSPs: 2)
Name: scaffold1114
Description:

Target: scaffold1114; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 286 - 426
Target Start/End: Original strand, 809 - 949
Alignment:
Q  286 tgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaatac 385  Q
    ||||||| ||| |||||||| |||||  |||||||||||||| ||||||||||||||||||||||  ||||||||||| ||||| |||||||||||||||    
T  809 tgatatgtactcaatgagtgaatgtctagatgacccattaacagaataatgggaaaccctaatggtcatccaatataaaagaggctatggtccccaatac 908  T
Q  386 actgtacacggcaaactctctcttctccccatctgaagaga 426  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  909 actgtacacgacaaactctctcttctccccatctgaagaga 949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1114; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 406 - 441
Target Start/End: Original strand, 950 - 985
Alignment:
Q  406 tcttctccccatctgaagagaacttgaggcataaag 441  Q
    ||||||||||||||||||||||||||||||||||||    
T  950 tcttctccccatctgaagagaacttgaggcataaag 985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0440 (Bit Score: 90; Significance: 3e-43; HSPs: 2)
Name: scaffold0440
Description:

Target: scaffold0440; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 284 - 440
Target Start/End: Complemental strand, 1603 - 1453
Alignment:
Q  284 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaat 383  Q
    ||||||||||||| ||||||||||||||||||||||||      |||||||||| ||| ||||||||| ||||||||||| ||||| |||||||||||||    
T  1603 gttgatatggactcaatgagtggatgtccggatgaccc------ggaataatggaaaatcctaatggccatccaatataaaagaggctatggtccccaat 1510  T
Q  384 acactgtacacggcaaactctctcttctccccatctgaagagaacttgaggcataaa 440  Q
    | |   ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  1509 atatcatacaccgcaaactctctcttctccccatctgaagagaacttgaggcataaa 1453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0440; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 226
Target Start/End: Complemental strand, 1698 - 1661
Alignment:
Q  189 ctatttatcaattgtgaaccttagttgattagtgatca 226  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  1698 ctatttatcaattgtgggccttagttgattagtgatca 1661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 84; Significance: 1e-39; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 284 - 387
Target Start/End: Original strand, 14017 - 14120
Alignment:
Q  284 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtccccaat 383  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||    
T  14017 gttgatatggattcaatgagtggatgtccggatgacccattaacggaataatgggaaaccctaatggtcatccaatataaaagaggttatggtccccaat 14116  T
Q  384 acac 387  Q
    ||||    
T  14117 acac 14120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0363 (Bit Score: 68; Significance: 3e-30; HSPs: 3)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 365 - 440
Target Start/End: Complemental strand, 953 - 878
Alignment:
Q  365 agaggttatggtccccaatacactgtacacggcaaactctctcttctccccatctgaagagaacttgaggcataaa 440  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  953 agaggctatggtccccaatacaccgtacacggcaaactctctcttctccccatctgaagagaacttgaggcataaa 878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0363; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 284 - 341
Target Start/End: Complemental strand, 1014 - 957
Alignment:
Q  284 gttgatatggacttaatgagtggatgtccggatgacccattaacggaataatgggaaa 341  Q
    |||||||||| || ||||||||||||| |||||| |||||||||| ||||||||||||    
T  1014 gttgatatgggctcaatgagtggatgttcggatgtcccattaacgaaataatgggaaa 957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0363; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 226
Target Start/End: Complemental strand, 1108 - 1072
Alignment:
Q  190 tatttatcaattgtgaaccttagttgattagtgatca 226  Q
    ||||||||||||||||  |||||||||||||||||||    
T  1108 tatttatcaattgtgagtcttagttgattagtgatca 1072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 284 - 386
Target Start/End: Original strand, 5711 - 5814
Alignment:
Q  284 gttgatatggacttaat--gagtggatgtccggatgacccattaacggaataatgggaaaccctaatggctatccaatataatagaggttatggtcccca 381  Q
    ||||||||||||| |||  |||||||||| |||||||||||||||| ||||||||||||| ||||| ||| || |||||||| ||||| |||||| ||||    
T  5711 gttgatatggactcaatatgagtggatgttcggatgacccattaacagaataatgggaaa-cctaacggccattcaatataaaagaggctatggttccca 5809  T
Q  382 ataca 386  Q
    |||||    
T  5810 ataca 5814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 226
Target Start/End: Original strand, 5617 - 5653
Alignment:
Q  190 tatttatcaattgtgaaccttagttgattagtgatca 226  Q
    |||||||||||||||| ||||| ||||||||||||||    
T  5617 tatttatcaattgtgagccttaattgattagtgatca 5653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 285 - 443
Target Start/End: Original strand, 38171 - 38330
Alignment:
Q  285 ttgatatggacttaatgag-tggatgtccggatgacccattaacggaataatgggaaaccctaatggctatc-caatataatagaggttatggtccccaa 382  Q
    ||||||||||||||||  | ||||||||  ||||||| |||||||||||||| | |||||||||||   ||| || |||||  |||||||||||| ||||    
T  38171 ttgatatggacttaatatggtggatgtctagatgaccgattaacggaataatagaaaaccctaatgatcatcacactataa--gaggttatggtctccaa 38268  T
Q  383 tacactgtacacggcaa-actctctcttctccccatctgaagagaacttgaggcataaaggt 443  Q
    ||||| ||||| |  || || |||| |||| ||||||||||||||||||||| |||||||||    
T  38269 tacaccgtacatgataatacactctattcttcccatctgaagagaacttgagacataaaggt 38330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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