View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1740_low_54 (Length: 429)
Name: NF1740_low_54
Description: NF1740
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1740_low_54 |
 | |
|
| [»] scaffold0891 (1 HSPs) |
| | |
|
| [»] scaffold2086 (1 HSPs) |
| | |
|
| [»] scaffold1996 (2 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 385; Significance: 0; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 385; E-Value: 0
Query Start/End: Original strand, 11 - 415
Target Start/End: Complemental strand, 35774846 - 35774442
Alignment:
| Q |
11 |
atcatcacttgaaagaatttgcttggggaatagcaaatagtaaattaccttttttatggatattgagaccagatgtagcaatgggtgaagaaatttcaac |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| |
|
|
| T |
35774846 |
atcatcacttgaaagaatttgcttggggaatagcaaatagtaaattaccttttttatggatattgagaccagatgtagcaatgggtgaagagacttcaac |
35774747 |
T |
|
| Q |
111 |
tttgccacaagattttctagatgaggttaaggatagaggatacataactagttggtgctatcaagatcaagtgctttctcatccatcaattgggggattc |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35774746 |
tttgccacaagattttctagatgaggttaaggatagaggatacataactagttggtgctatcaagatcaagtgctttctcatccatcaattgggggattc |
35774647 |
T |
|
| Q |
211 |
ttaactcattgtggttggaattctacacttgaaactatttcttatggtgtgcctactatttgttggcctttctttgctgagcaacaaacaaattgtaggt |
310 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
35774646 |
ttaactcattgtggttggaattctacacttgaaactatttcctatggtgtgcctactatttgttggcctttctttgctgagcaacaaacaaattgttggt |
35774547 |
T |
|
| Q |
311 |
atttatgcaagtcttggaaaatagggatggaaattaaccatgatgttaaaagggatgagataacagaacttgttgtgcaaatgatggaaggagaaaaggg |
410 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35774546 |
atttatgcaagtcttggaaaatagggatggaaattaaccatgatgttaaaagggatgatataacagaacttgttgtgcaaatgatggaaggagaaaaggg |
35774447 |
T |
|
| Q |
411 |
aaaag |
415 |
Q |
| |
|
||||| |
|
|
| T |
35774446 |
aaaag |
35774442 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 11 - 415
Target Start/End: Complemental strand, 35866298 - 35865894
Alignment:
| Q |
11 |
atcatcacttgaaagaatttgcttggggaatagcaaatagtaaattaccttttttatggatattgagaccagatgtagcaatgggtgaagaaatttcaac |
110 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||| ||||||||||||||| |||||||||||| | |||| | |
|
|
| T |
35866298 |
atcatcacttgaaagaatttgcttggggaatagcaaatagcaaattaccatttttgtggattatgagaccagatgtagtaatgggtgaagagacttcatc |
35866199 |
T |
|
| Q |
111 |
tttgccacaagattttctagatgaggttaaggatagaggatacataactagttggtgctatcaagatcaagtgctttctcatccatcaattgggggattc |
210 |
Q |
| |
|
|||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
35866198 |
tttgcctcaagagtttctagatgaagttaaggatagaggatacataactagttggtgctatcaagatcaagtgctttctcatccatcagttgggggattc |
35866099 |
T |
|
| Q |
211 |
ttaactcattgtggttggaattctacacttgaaactatttcttatggtgtgcctactatttgttggcctttctttgctgagcaacaaacaaattgtaggt |
310 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35866098 |
ttgactcattgtggttggaattctacacttgaaactatttcctatggtgtgcctactatttgttggcctttctttgctgagcaacaaacaaattgtaggt |
35865999 |
T |
|
| Q |
311 |
atttatgcaagtcttggaaaatagggatggaaattaaccatgatgttaaaagggatgagataacagaacttgttgtgcaaatgatggaaggagaaaaggg |
410 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||| ||||||| ||||| || ||||||| ||||||||| || ||||||||||||||||||| || |
|
|
| T |
35865998 |
atttatgcaacacttggaaaatagggatggaaattaactatgatgtgaaaagagaagagataagagaacttgtgatggaaatgatggaaggagaaaaagg |
35865899 |
T |
|
| Q |
411 |
aaaag |
415 |
Q |
| |
|
||||| |
|
|
| T |
35865898 |
aaaag |
35865894 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 11 - 415
Target Start/End: Complemental strand, 35848627 - 35848223
Alignment:
| Q |
11 |
atcatcacttgaaagaatttgcttggggaatagcaaatagtaaattaccttttttatggatattgagaccagatgtagcaatgggtgaagaaatttcaac |
110 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||| ||||||||||||||| |||||||||||| | |||| | |
|
|
| T |
35848627 |
atcatcacttgaaagaatttgcttggggaatagcaaatagcaaattaccatttttgtggattatgagaccagatgtagtaatgggtgaagagacttcatc |
35848528 |
T |
|
| Q |
111 |
tttgccacaagattttctagatgaggttaaggatagaggatacataactagttggtgctatcaagatcaagtgctttctcatccatcaattgggggattc |
210 |
Q |
| |
|
|||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
35848527 |
tttgcctcaagagtttctagatgaagttaaggatagaggatacataactagttggtgctatcaagatcaagtgctttctcatccatcagttgggggattc |
35848428 |
T |
|
| Q |
211 |
ttaactcattgtggttggaattctacacttgaaactatttcttatggtgtgcctactatttgttggcctttctttgctgagcaacaaacaaattgtaggt |
310 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
35848427 |
ttgactcattgtggttggaattctacacttgaaactatttcctatggtgtgcctactatttgttggcctttctttgttgagcaacaaacaaattgtaggt |
35848328 |
T |
|
| Q |
311 |
atttatgcaagtcttggaaaatagggatggaaattaaccatgatgttaaaagggatgagataacagaacttgttgtgcaaatgatggaaggagaaaaggg |
410 |
Q |
| |
|
|||||||||| |||||||||| ||||||||||||||| ||||||| ||||| || ||||||| |||||||| || ||||||||||||||||||| || |
|
|
| T |
35848327 |
atttatgcaacacttggaaaattgggatggaaattaactatgatgtgaaaagtgaagagataattgaacttgtgatggaaatgatggaaggagaaaaagg |
35848228 |
T |
|
| Q |
411 |
aaaag |
415 |
Q |
| |
|
||||| |
|
|
| T |
35848227 |
aaaag |
35848223 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 11 - 414
Target Start/End: Complemental strand, 35754723 - 35754320
Alignment:
| Q |
11 |
atcatcacttgaaagaatttgcttggggaatagcaaatagtaaattaccttttttatggatattgagaccagatgtagcaatgggtgaagaaatttcaac |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
35754723 |
atcatcacttgaaagaatttgcttggggaatagcaaatagtaaattaccatttttatggataatgagaccagatgtagtaatgggtgaagaaatttcaac |
35754624 |
T |
|
| Q |
111 |
tttgccacaagattttctagatgaggttaaggatagaggatacataactagttggtgctatcaagatcaagtgctttctcatccatcaattgggggattc |
210 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||| |||||| || |
|
|
| T |
35754623 |
tttgccacaagattttctagatgaagttaaggatagaggatacataactagttggtgcatgcaagaccaagtgcttgctcatccatcagttggggttttt |
35754524 |
T |
|
| Q |
211 |
ttaactcattgtggttggaattctacacttgaaactatttcttatggtgtgcctactatttgttggcctttctttgctgagcaacaaacaaattgtaggt |
310 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||| ||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||| | || |
|
|
| T |
35754523 |
ctaactcattgtggttggaattctacaattgaaaccatttcttcaggtgttcctactatttgttggcccttctttgctgagcaacaaacaaattgcaagt |
35754424 |
T |
|
| Q |
311 |
atttatgcaagtcttggaaaatagggatggaaattaaccatgatgttaaaagggatgagataacagaacttgttgtgcaaatgatggaaggagaaaaggg |
410 |
Q |
| |
|
|||||||| | |||||||| |||| |||||||||||| ||||||| |||||||| ||||||||||||||||| || |||||||| ||||||||||||| |
|
|
| T |
35754423 |
atttatgcgacacttggaaagtaggaatggaaattaacaatgatgtaaaaagggaagagataacagaacttgtactggaaatgatgaaaggagaaaaggg |
35754324 |
T |
|
| Q |
411 |
aaaa |
414 |
Q |
| |
|
|||| |
|
|
| T |
35754323 |
aaaa |
35754320 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 25 - 383
Target Start/End: Complemental strand, 35735867 - 35735512
Alignment:
| Q |
25 |
gaatttgcttggggaatagcaaatagtaaattaccttttttatggatattgagaccagatgtagcaatgggtgaagaaatttcaact-ttgccacaagat |
123 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||| | | || ||| |||| || | ||| ||||||| |
|
|
| T |
35735867 |
gaatttgcttggggtttagcaaatagtaaattaccatttttatggataaatagaccagatttggtaaaggga----aaatgtcgtccattgtcacaagaa |
35735772 |
T |
|
| Q |
124 |
tttctagatgaggttaaggatagaggatacataactagttggtgctatcaagatcaagtgctttctcatccatcaattgggggattcttaactcattgtg |
223 |
Q |
| |
|
||| ||||||| |||||||||||||| || |||| | ||||| |||| | |||| ||| ||||||||||| |||||| ||| ||||||||||||| |
|
|
| T |
35735771 |
tttttagatgaagttaaggatagaggttatataataacatggtgtcctcaaagtgaagtacttgctcatccatcagttggggtatttttaactcattgtg |
35735672 |
T |
|
| Q |
224 |
gttggaattctacacttgaaactatttcttatggtgtgcctactatttgttggcctttctttgctgagcaacaaacaaattgtaggtatttatgcaagtc |
323 |
Q |
| |
|
|||||||||| ||||||| | ||||||| | ||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||| || ||| | |
|
|
| T |
35735671 |
gttggaattcatcacttgagagtatttctgaaggtaagcctatgattggttggcctttctttgctgagcaacaaacaaattgtaggtatataagcacaac |
35735572 |
T |
|
| Q |
324 |
ttggaaaatagggatggaaattaaccatgatgttaaaagggatgagataacagaacttgt |
383 |
Q |
| |
|
|||| ||||||||||| ||||| ||||||| ||||| || ||| |||| |||||||| |
|
|
| T |
35735571 |
ttgggggatagggatggatattaaggatgatgtgaaaagagaagaggtaactgaacttgt |
35735512 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0891 (Bit Score: 321; Significance: 0; HSPs: 1)
Name: scaffold0891
Description:
Target: scaffold0891; HSP #1
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 11 - 415
Target Start/End: Original strand, 3245 - 3649
Alignment:
| Q |
11 |
atcatcacttgaaagaatttgcttggggaatagcaaatagtaaattaccttttttatggatattgagaccagatgtagcaatgggtgaagaaatttcaac |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| |
|
|
| T |
3245 |
atcatcacttgaaagaatttgcttggggaatagcaaatagtaaattaccttttttatggatattgagaccagatgtagcaatgggtgaagagacttcaac |
3344 |
T |
|
| Q |
111 |
tttgccacaagattttctagatgaggttaaggatagaggatacataactagttggtgctatcaagatcaagtgctttctcatccatcaattgggggattc |
210 |
Q |
| |
|
|||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||| ||||| |||||||| ||||||||||| ||||||||||| |
|
|
| T |
3345 |
tttgccacaagagtttctagatgaagttaaggataaaggatacataactagttggtgctcccaagacgaagtgcttgctcatccatcagttgggggattc |
3444 |
T |
|
| Q |
211 |
ttaactcattgtggttggaattctacacttgaaactatttcttatggtgtgcctactatttgttggcctttctttgctgagcaacaaacaaattgtaggt |
310 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
3445 |
ttgactcattgtggttggaattctacacttgaaactatttcttatggtgtgcctactatttgttggcctttctttgctgaacaacaaacaaattgtaggt |
3544 |
T |
|
| Q |
311 |
atttatgcaagtcttggaaaatagggatggaaattaaccatgatgttaaaagggatgagataacagaacttgttgtgcaaatgatggaaggagaaaaggg |
410 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||| || |||||||| || |||||||||| |
|
|
| T |
3545 |
atttatgcaagtcttggaaaatagggatggaaattaaccatgatgttaaaagggatgatataactgaaattgtaatggaaatgatgaaacgagaaaaggg |
3644 |
T |
|
| Q |
411 |
aaaag |
415 |
Q |
| |
|
||||| |
|
|
| T |
3645 |
aaaag |
3649 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold2086 (Bit Score: 281; Significance: 1e-157; HSPs: 1)
Name: scaffold2086
Description:
Target: scaffold2086; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 11 - 415
Target Start/End: Original strand, 108 - 512
Alignment:
| Q |
11 |
atcatcacttgaaagaatttgcttggggaatagcaaatagtaaattaccttttttatggatattgagaccagatgtagcaatgggtgaagaaatttcaac |
110 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||| || |||||||||||| ||||||||||||||| |||||||| |||| |||| | |
|
|
| T |
108 |
atcaccacttgaaagaatttgcttggggaatagcaaatagtaaattgccatttttatggataatgagaccagatgtagtaatgggtgtggaaacttcatc |
207 |
T |
|
| Q |
111 |
tttgccacaagattttctagatgaggttaaggatagaggatacataactagttggtgctatcaagatcaagtgctttctcatccatcaattgggggattc |
210 |
Q |
| |
|
|||||||||||| |||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||| || ||| |
|
|
| T |
208 |
tttgccacaagagtttctagatgaggtaaaagatagaggatacataactagttggtgctttcaagatcaagtgcttgctcatccatcggttggagggttc |
307 |
T |
|
| Q |
211 |
ttaactcattgtggttggaattctacacttgaaactatttcttatggtgtgcctactatttgttggcctttctttgctgagcaacaaacaaattgtaggt |
310 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||| |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
308 |
ctaactcattgtggttggaattctacacttgaagctatatcttctggtatgcctactatttgttggcctttctttgctgagcaacaaacaaattgtaggt |
407 |
T |
|
| Q |
311 |
atttatgcaagtcttggaaaatagggatggaaattaaccatgatgttaaaagggatgagataacagaacttgttgtgcaaatgatggaaggagaaaaggg |
410 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||| || |||||||||||||||||||||| |
|
|
| T |
408 |
atttatgcaacacttggaaaatagggatggaaattaaccatgatgttaaaagggatgatataaaagaaattgtgatggaaatgatggaaggagaaaaggg |
507 |
T |
|
| Q |
411 |
aaaag |
415 |
Q |
| |
|
||||| |
|
|
| T |
508 |
aaaag |
512 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1996 (Bit Score: 281; Significance: 1e-157; HSPs: 2)
Name: scaffold1996
Description:
Target: scaffold1996; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 11 - 415
Target Start/End: Original strand, 108 - 512
Alignment:
| Q |
11 |
atcatcacttgaaagaatttgcttggggaatagcaaatagtaaattaccttttttatggatattgagaccagatgtagcaatgggtgaagaaatttcaac |
110 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||| || |||||||||||| ||||||||||||||| |||||||| |||| |||| | |
|
|
| T |
108 |
atcaccacttgaaagaatttgcttggggaatagcaaatagtaaattgccatttttatggataatgagaccagatgtagtaatgggtgtggaaacttcatc |
207 |
T |
|
| Q |
111 |
tttgccacaagattttctagatgaggttaaggatagaggatacataactagttggtgctatcaagatcaagtgctttctcatccatcaattgggggattc |
210 |
Q |
| |
|
|||||||||||| |||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||| || ||| |
|
|
| T |
208 |
tttgccacaagagtttctagatgaggtaaaagatagaggatacataactagttggtgctttcaagatcaagtgcttgctcatccatcggttggagggttc |
307 |
T |
|
| Q |
211 |
ttaactcattgtggttggaattctacacttgaaactatttcttatggtgtgcctactatttgttggcctttctttgctgagcaacaaacaaattgtaggt |
310 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||| |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
308 |
ctaactcattgtggttggaattctacacttgaagctatatcttctggtatgcctactatttgttggcctttctttgctgagcaacaaacaaattgtaggt |
407 |
T |
|
| Q |
311 |
atttatgcaagtcttggaaaatagggatggaaattaaccatgatgttaaaagggatgagataacagaacttgttgtgcaaatgatggaaggagaaaaggg |
410 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||| || |||||||||||||||||||||| |
|
|
| T |
408 |
atttatgcaacacttggaaaatagggatggaaattaaccatgatgttaaaagggatgatataaaagaaattgtgatggaaatgatggaaggagaaaaggg |
507 |
T |
|
| Q |
411 |
aaaag |
415 |
Q |
| |
|
||||| |
|
|
| T |
508 |
aaaag |
512 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1996; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 293 - 383
Target Start/End: Original strand, 1083 - 1173
Alignment:
| Q |
293 |
aacaaacaaattgtaggtatttatgcaagtcttggaaaatagggatggaaattaaccatgatgttaaaagggatgagataacagaacttgt |
383 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||| |||||||| |||||||| |
|
|
| T |
1083 |
aacaaacaaattgtaggtatttatgcaacacttggaaaattgggatggaaattaaccatgatgtgaaaagggaagagataaccgaacttgt |
1173 |
T |
|
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Target: chr7 (Bit Score: 35; Significance: 0.0000000002; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 197 - 243
Target Start/End: Original strand, 41518136 - 41518182
Alignment:
| Q |
197 |
caattgggggattcttaactcattgtggttggaattctacacttgaa |
243 |
Q |
| |
|
||||||| ||||||||||| |||||||||||||||||||| |||||| |
|
|
| T |
41518136 |
caattggaggattcttaacacattgtggttggaattctactcttgaa |
41518182 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 197 - 243
Target Start/End: Original strand, 41537115 - 41537161
Alignment:
| Q |
197 |
caattgggggattcttaactcattgtggttggaattctacacttgaa |
243 |
Q |
| |
|
||||||| ||||||||||| |||||||||||||||||||| |||||| |
|
|
| T |
41537115 |
caattggaggattcttaacacattgtggttggaattctactcttgaa |
41537161 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 196 - 243
Target Start/End: Original strand, 41511444 - 41511491
Alignment:
| Q |
196 |
tcaattgggggattcttaactcattgtggttggaattctacacttgaa |
243 |
Q |
| |
|
|||||||| ||||| || |||||||||||||||||||| ||||||||| |
|
|
| T |
41511444 |
tcaattggtggatttttgactcattgtggttggaattcaacacttgaa |
41511491 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 196 - 243
Target Start/End: Original strand, 48532786 - 48532833
Alignment:
| Q |
196 |
tcaattgggggattcttaactcattgtggttggaattctacacttgaa |
243 |
Q |
| |
|
|||||||| ||||||||||| |||||||| |||||||| ||||||||| |
|
|
| T |
48532786 |
tcaattggaggattcttaacacattgtggatggaattcaacacttgaa |
48532833 |
T |
|
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Target: chr6 (Bit Score: 33; Significance: 0.000000002; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 845059 - 845011
Alignment:
| Q |
196 |
tcaattgggggattcttaactcattgtggttggaattctacacttgaaa |
244 |
Q |
| |
|
|||||||| || || ||||||||||||||||||||||| |||||||||| |
|
|
| T |
845059 |
tcaattggtgggtttttaactcattgtggttggaattcaacacttgaaa |
845011 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 870343 - 870295
Alignment:
| Q |
196 |
tcaattgggggattcttaactcattgtggttggaattctacacttgaaa |
244 |
Q |
| |
|
|||||||| || || ||||||||||||||||||||||| |||||||||| |
|
|
| T |
870343 |
tcaattggtgggtttttaactcattgtggttggaattcaacacttgaaa |
870295 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 230
Target Start/End: Complemental strand, 4626292 - 4626252
Alignment:
| Q |
190 |
catccatcaattgggggattcttaactcattgtggttggaa |
230 |
Q |
| |
|
||||| |||||||| |||||||||||||||||||| ||||| |
|
|
| T |
4626292 |
catccttcaattggtggattcttaactcattgtggatggaa |
4626252 |
T |
|
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Target: chr4 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 237
Target Start/End: Complemental strand, 8136568 - 8136528
Alignment:
| Q |
197 |
caattgggggattcttaactcattgtggttggaattctaca |
237 |
Q |
| |
|
||||||| ||||||||||| ||||||||||||||||||||| |
|
|
| T |
8136568 |
caattggaggattcttaacacattgtggttggaattctaca |
8136528 |
T |
|
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Target: chr5 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 184 - 243
Target Start/End: Original strand, 20155238 - 20155297
Alignment:
| Q |
184 |
ctttctcatccatcaattgggggattcttaactcattgtggttggaattctacacttgaa |
243 |
Q |
| |
|
||||||||||| |||||||| |||||||| || |||||||| |||||||| ||| ||||| |
|
|
| T |
20155238 |
ctttctcatccttcaattggaggattcttgacacattgtggatggaattcaacaattgaa |
20155297 |
T |
|
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