View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1740_low_96 (Length: 318)

Name: NF1740_low_96
Description: NF1740
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1740_low_96
NF1740_low_96
[»] scaffold0003 (2 HSPs)
scaffold0003 (14-223)||(303814-304023)
scaffold0003 (208-300)||(304145-304237)
[»] chr5 (44 HSPs)
chr5 (14-223)||(20071209-20071418)
chr5 (208-300)||(20071540-20071632)
chr5 (14-175)||(22578930-22579092)
chr5 (44-172)||(19577206-19577334)
chr5 (14-101)||(8074121-8074208)
chr5 (64-172)||(9737752-9737861)
chr5 (44-101)||(37042579-37042636)
chr5 (44-172)||(43348637-43348766)
chr5 (42-101)||(10925697-10925756)
chr5 (14-101)||(13013137-13013224)
chr5 (14-93)||(26296891-26296970)
chr5 (43-172)||(9596190-9596320)
chr5 (44-177)||(20486970-20487104)
chr5 (44-101)||(9596078-9596135)
chr5 (44-101)||(26785018-26785075)
chr5 (44-101)||(32304565-32304622)
chr5 (44-172)||(43358413-43358542)
chr5 (44-172)||(8074264-8074394)
chr5 (14-101)||(13084525-13084612)
chr5 (14-101)||(25701304-25701390)
chr5 (14-172)||(26525225-26525384)
chr5 (14-101)||(30773067-30773154)
chr5 (75-169)||(16285268-16285362)
chr5 (51-172)||(16823134-16823256)
chr5 (64-172)||(3631262-3631371)
chr5 (44-101)||(3631447-3631504)
chr5 (44-101)||(7440393-7440450)
chr5 (44-172)||(30772882-30773011)
chr5 (17-172)||(41084580-41084734)
chr5 (44-101)||(43348822-43348879)
chr5 (44-104)||(43358595-43358655)
chr5 (14-101)||(16823319-16823406)
chr5 (31-122)||(30062701-30062792)
chr5 (24-122)||(30050097-30050195)
chr5 (44-101)||(26525142-26525199)
chr5 (44-93)||(41084494-41084543)
chr5 (44-171)||(29390273-29390401)
chr5 (14-93)||(20656853-20656932)
chr5 (44-130)||(32304678-32304765)
chr5 (43-172)||(13013279-13013409)
chr5 (20-136)||(10925548-10925665)
chr5 (51-130)||(15374160-15374240)
chr5 (17-172)||(26297007-26297163)
chr5 (14-122)||(41817507-41817615)
[»] chr2 (49 HSPs)
chr2 (14-172)||(1115034-1115193)
chr2 (24-129)||(11935382-11935487)
chr2 (14-101)||(12995154-12995241)
chr2 (44-101)||(1020981-1021038)
chr2 (44-172)||(34983279-34983408)
chr2 (44-172)||(44545755-44545884)
chr2 (44-102)||(38527360-38527418)
chr2 (44-101)||(11935288-11935345)
chr2 (44-101)||(16194440-16194497)
chr2 (44-172)||(22674766-22674895)
chr2 (44-172)||(23869666-23869795)
chr2 (44-101)||(23869851-23869908)
chr2 (44-101)||(34983464-34983521)
chr2 (64-172)||(36436228-36436337)
chr2 (44-101)||(42016691-42016748)
chr2 (44-101)||(44545642-44545699)
chr2 (14-101)||(2249769-2249856)
chr2 (43-101)||(13615875-13615933)
chr2 (51-101)||(26860582-26860632)
chr2 (44-106)||(31643637-31643699)
chr2 (44-101)||(7366339-7366396)
chr2 (44-101)||(26293348-26293405)
chr2 (64-172)||(34494521-34494630)
chr2 (44-101)||(36436095-36436152)
chr2 (64-172)||(38527177-38527286)
chr2 (44-172)||(38763717-38763846)
chr2 (44-101)||(38763902-38763959)
chr2 (44-172)||(41699187-41699316)
chr2 (14-130)||(43471450-43471567)
chr2 (64-172)||(1021114-1021225)
chr2 (14-172)||(6750002-6750161)
chr2 (14-101)||(11764982-11765069)
chr2 (44-130)||(26293205-26293292)
chr2 (14-101)||(31392734-31392821)
chr2 (51-172)||(2249584-2249706)
chr2 (51-101)||(3836259-3836309)
chr2 (44-101)||(1114951-1115008)
chr2 (44-101)||(6749919-6749976)
chr2 (36-100)||(29141949-29142013)
chr2 (44-130)||(11764839-11764926)
chr2 (51-101)||(28745413-28745463)
chr2 (44-122)||(31392601-31392679)
chr2 (23-93)||(32100014-32100084)
chr2 (44-122)||(42016557-42016635)
chr2 (44-93)||(3836366-3836415)
chr2 (44-172)||(13615989-13616118)
chr2 (24-101)||(26860668-26860745)
chr2 (17-101)||(2077565-2077649)
chr2 (26-98)||(29035408-29035480)
[»] chr3 (45 HSPs)
chr3 (43-172)||(52201985-52202115)
chr3 (14-101)||(50527517-50527604)
chr3 (14-172)||(29126040-29126199)
chr3 (20-103)||(52499200-52499283)
chr3 (44-172)||(32270946-32271073)
chr3 (44-101)||(11232068-11232125)
chr3 (44-101)||(13594787-13594844)
chr3 (44-101)||(22729408-22729465)
chr3 (44-101)||(28952305-28952362)
chr3 (44-101)||(32270833-32270890)
chr3 (44-101)||(36633675-36633732)
chr3 (44-101)||(44254514-44254571)
chr3 (44-101)||(49657125-49657182)
chr3 (42-172)||(28952416-28952547)
chr3 (14-101)||(29125927-29126014)
chr3 (44-130)||(44254627-44254714)
chr3 (44-101)||(1092791-1092848)
chr3 (14-170)||(1092874-1093031)
chr3 (44-101)||(12251421-12251478)
chr3 (44-168)||(12251534-12251659)
chr3 (44-172)||(18163721-18163850)
chr3 (44-129)||(21259461-21259546)
chr3 (44-101)||(35083981-35084038)
chr3 (44-172)||(36633490-36633619)
chr3 (14-172)||(50527630-50527789)
chr3 (14-136)||(11232151-11232272)
chr3 (44-122)||(45045263-45045341)
chr3 (44-172)||(7160317-7160446)
chr3 (44-101)||(16908732-16908789)
chr3 (44-101)||(21259234-21259291)
chr3 (44-101)||(21259348-21259405)
chr3 (44-172)||(22729223-22729352)
chr3 (44-101)||(25246251-25246308)
chr3 (14-130)||(35083838-35083955)
chr3 (44-172)||(52571451-52571580)
chr3 (14-90)||(31174556-31174632)
chr3 (14-122)||(34660800-34660908)
chr3 (14-101)||(13594870-13594957)
chr3 (14-101)||(27742561-27742648)
chr3 (14-101)||(27742674-27742761)
chr3 (51-93)||(52202178-52202220)
chr3 (64-101)||(45045398-45045435)
chr3 (44-101)||(49169981-49170038)
chr3 (44-164)||(49657238-49657358)
chr3 (22-78)||(52571324-52571380)
[»] chr7 (44 HSPs)
chr7 (44-172)||(26873706-26873835)
chr7 (14-169)||(41367666-41367821)
chr7 (14-168)||(8461706-8461861)
chr7 (14-101)||(36675370-36675457)
chr7 (14-101)||(44723946-44724033)
chr7 (14-172)||(45350055-45350213)
chr7 (14-172)||(46027683-46027842)
chr7 (44-101)||(29075098-29075155)
chr7 (44-172)||(36675513-36675642)
chr7 (14-101)||(39976509-39976596)
chr7 (14-101)||(43859279-43859366)
chr7 (51-101)||(22723696-22723746)
chr7 (51-172)||(44724096-44724218)
chr7 (44-101)||(31065536-31065593)
chr7 (44-93)||(42241842-42241891)
chr7 (44-101)||(45350239-45350296)
chr7 (14-101)||(36358193-36358280)
chr7 (14-172)||(43859094-43859253)
chr7 (64-122)||(6961101-6961159)
chr7 (51-101)||(17167055-17167105)
chr7 (14-100)||(25174223-25174309)
chr7 (44-172)||(17166869-17166998)
chr7 (44-101)||(22566606-22566663)
chr7 (44-101)||(31931937-31931994)
chr7 (44-101)||(40055779-40055836)
chr7 (44-101)||(44142949-44143006)
chr7 (44-101)||(46027868-46027925)
chr7 (20-101)||(46828838-46828919)
chr7 (14-172)||(16834273-16834432)
chr7 (14-101)||(41367847-41367934)
chr7 (51-101)||(23469316-23469366)
chr7 (44-122)||(42241955-42242033)
chr7 (44-93)||(9624192-9624241)
chr7 (44-93)||(16834188-16834237)
chr7 (44-101)||(23469422-23469479)
chr7 (44-172)||(36358336-36358465)
chr7 (14-98)||(26873894-26873978)
chr7 (42-122)||(28754860-28754940)
chr7 (14-101)||(31428925-31429012)
chr7 (14-80)||(29663010-29663076)
chr7 (14-172)||(29502128-29502287)
chr7 (64-101)||(44467954-44467991)
chr7 (44-172)||(44468047-44468176)
chr7 (140-180)||(8727717-8727757)
[»] chr4 (52 HSPs)
chr4 (44-172)||(18491190-18491319)
chr4 (68-175)||(9046131-9046239)
chr4 (14-98)||(19653528-19653612)
chr4 (14-172)||(13857616-13857774)
chr4 (14-101)||(16925294-16925381)
chr4 (21-111)||(52581634-52581724)
chr4 (44-101)||(38141470-38141527)
chr4 (64-172)||(27270357-27270465)
chr4 (14-101)||(2654793-2654880)
chr4 (14-172)||(11650962-11651121)
chr4 (25-130)||(10096463-10096569)
chr4 (44-101)||(10096369-10096426)
chr4 (44-101)||(13233418-13233475)
chr4 (44-101)||(18491375-18491432)
chr4 (44-172)||(19653670-19653799)
chr4 (44-101)||(43564606-43564663)
chr4 (76-172)||(44134497-44134594)
chr4 (44-101)||(44745503-44745560)
chr4 (44-172)||(36584427-36584555)
chr4 (14-101)||(10393898-10393985)
chr4 (14-101)||(12700451-12700538)
chr4 (14-93)||(27270549-27270628)
chr4 (64-172)||(40228476-40228586)
chr4 (14-101)||(41832565-41832652)
chr4 (24-130)||(50767079-50767186)
chr4 (14-93)||(54795612-54795691)
chr4 (44-122)||(41832430-41832508)
chr4 (44-101)||(6756017-6756074)
chr4 (44-101)||(22647299-22647356)
chr4 (14-99)||(26653132-26653217)
chr4 (44-101)||(31581663-31581720)
chr4 (44-172)||(31581776-31581905)
chr4 (44-101)||(36584611-36584668)
chr4 (44-101)||(44134681-44134738)
chr4 (44-93)||(44817463-44817512)
chr4 (44-93)||(50767230-50767279)
chr4 (44-104)||(11650879-11650939)
chr4 (45-101)||(36954924-36954980)
chr4 (17-172)||(44817548-44817704)
chr4 (14-172)||(16925110-16925268)
chr4 (51-172)||(51001479-51001601)
chr4 (44-101)||(4632731-4632788)
chr4 (76-172)||(6755832-6755929)
chr4 (44-93)||(13613005-13613054)
chr4 (44-101)||(31664080-31664137)
chr4 (44-172)||(44745616-44745745)
chr4 (14-130)||(45670005-45670122)
chr4 (43-101)||(13869217-13869275)
chr4 (44-122)||(54795755-54795833)
chr4 (76-165)||(11975782-11975871)
chr4 (44-93)||(40228343-40228392)
chr4 (78-169)||(18668935-18669027)
[»] chr1 (64 HSPs)
chr1 (14-111)||(23177520-23177617)
chr1 (14-172)||(6849756-6849915)
chr1 (44-172)||(33012082-33012211)
chr1 (14-165)||(21852011-21852163)
chr1 (14-101)||(29981589-29981676)
chr1 (14-172)||(42371973-42372132)
chr1 (44-101)||(16692861-16692918)
chr1 (20-101)||(17285182-17285263)
chr1 (44-101)||(25299000-25299057)
chr1 (44-101)||(45837032-45837089)
chr1 (44-101)||(46224672-46224729)
chr1 (14-172)||(16692944-16693103)
chr1 (14-101)||(44052341-44052428)
chr1 (75-168)||(17879917-17880011)
chr1 (43-101)||(29170130-29170188)
chr1 (44-101)||(8086418-8086475)
chr1 (20-101)||(9042307-9042388)
chr1 (44-172)||(17285319-17285448)
chr1 (44-101)||(24542692-24542749)
chr1 (44-101)||(24542806-24542863)
chr1 (44-101)||(24542920-24542977)
chr1 (44-101)||(24543034-24543091)
chr1 (44-101)||(24543148-24543205)
chr1 (44-101)||(24543262-24543319)
chr1 (44-101)||(24543376-24543433)
chr1 (44-101)||(24543490-24543547)
chr1 (44-101)||(24543604-24543661)
chr1 (44-101)||(24543718-24543775)
chr1 (44-101)||(24543832-24543889)
chr1 (44-101)||(24543946-24544003)
chr1 (44-101)||(24544060-24544117)
chr1 (44-101)||(24544174-24544231)
chr1 (44-101)||(24544288-24544345)
chr1 (44-101)||(24544402-24544459)
chr1 (44-101)||(24544516-24544573)
chr1 (44-101)||(24544630-24544687)
chr1 (44-101)||(40428693-40428750)
chr1 (44-104)||(51139871-51139931)
chr1 (14-101)||(33011939-33012026)
chr1 (14-101)||(47561915-47562002)
chr1 (43-101)||(6849941-6849999)
chr1 (44-172)||(29981732-29981861)
chr1 (44-101)||(40567154-40567211)
chr1 (44-101)||(42372158-42372215)
chr1 (64-172)||(44052504-44052613)
chr1 (44-101)||(48708329-48708386)
chr1 (14-122)||(51139740-51139848)
chr1 (24-130)||(9246906-9247013)
chr1 (14-93)||(49001477-49001555)
chr1 (67-128)||(25030306-25030368)
chr1 (64-101)||(919642-919679)
chr1 (44-172)||(8086233-8086362)
chr1 (64-172)||(8530086-8530195)
chr1 (64-101)||(24790623-24790660)
chr1 (44-172)||(37125696-37125825)
chr1 (14-122)||(32540589-32540697)
chr1 (44-170)||(919735-919862)
chr1 (14-81)||(37343082-37343149)
chr1 (44-122)||(25299113-25299191)
chr1 (51-101)||(37125881-37125931)
chr1 (14-99)||(24790512-24790597)
chr1 (44-172)||(29169945-29170074)
chr1 (44-101)||(40428806-40428863)
chr1 (116-172)||(37343029-37343085)
[»] scaffold0978 (1 HSPs)
scaffold0978 (14-111)||(1282-1379)
[»] chr8 (48 HSPs)
chr8 (44-101)||(41388194-41388251)
chr8 (44-130)||(7422075-7422162)
chr8 (14-101)||(36060546-36060633)
chr8 (43-101)||(197278-197336)
chr8 (43-101)||(312115-312173)
chr8 (44-172)||(3886807-3886936)
chr8 (44-172)||(7012341-7012470)
chr8 (44-101)||(28565073-28565130)
chr8 (44-101)||(28572696-28572753)
chr8 (44-101)||(42556007-42556064)
chr8 (14-122)||(32017972-32018080)
chr8 (14-101)||(5590057-5590144)
chr8 (14-172)||(41837951-41838110)
chr8 (44-101)||(2317250-2317307)
chr8 (44-101)||(4697995-4698052)
chr8 (44-101)||(38567318-38567375)
chr8 (44-101)||(43117538-43117595)
chr8 (14-98)||(1184014-1184098)
chr8 (14-101)||(1098246-1098333)
chr8 (44-111)||(7242549-7242616)
chr8 (14-93)||(7413228-7413307)
chr8 (31-178)||(8996346-8996492)
chr8 (14-101)||(22658230-22658317)
chr8 (44-101)||(7012526-7012583)
chr8 (44-172)||(9830611-9830740)
chr8 (14-98)||(24796937-24797021)
chr8 (44-104)||(41837868-41837928)
chr8 (14-172)||(6316880-6317039)
chr8 (14-101)||(25642729-25642816)
chr8 (51-101)||(3886701-3886751)
chr8 (51-172)||(4231224-4231345)
chr8 (44-137)||(7242661-7242755)
chr8 (25-172)||(11635762-11635911)
chr8 (14-150)||(17836452-17836590)
chr8 (44-172)||(1183826-1183955)
chr8 (44-136)||(2317101-2317194)
chr8 (44-93)||(4231416-4231465)
chr8 (44-172)||(5590200-5590329)
chr8 (44-101)||(21435028-21435085)
chr8 (44-172)||(24797080-24797209)
chr8 (44-101)||(43117424-43117481)
chr8 (51-99)||(3659743-3659791)
chr8 (44-103)||(6317063-6317122)
chr8 (14-101)||(10092443-10092530)
chr8 (44-130)||(42556120-42556207)
chr8 (64-122)||(7413086-7413144)
chr8 (44-172)||(3659849-3659978)
chr8 (64-104)||(41388078-41388118)
[»] chr6 (29 HSPs)
chr6 (14-101)||(12996474-12996561)
chr6 (44-175)||(13405389-13405521)
chr6 (14-101)||(7022006-7022093)
chr6 (14-101)||(12698682-12698769)
chr6 (43-101)||(8560614-8560672)
chr6 (14-172)||(12698497-12698657)
chr6 (14-101)||(2660721-2660808)
chr6 (14-101)||(23258837-23258924)
chr6 (14-101)||(23258951-23259038)
chr6 (17-175)||(31489825-31489981)
chr6 (44-93)||(11450417-11450466)
chr6 (44-101)||(14883074-14883131)
chr6 (20-101)||(24635359-24635440)
chr6 (64-172)||(26468452-26468561)
chr6 (44-101)||(26468637-26468694)
chr6 (44-93)||(34023455-34023504)
chr6 (44-101)||(34127686-34127743)
chr6 (44-130)||(7021863-7021950)
chr6 (54-101)||(15469278-15469325)
chr6 (44-172)||(16461435-16461564)
chr6 (77-172)||(10290461-10290557)
chr6 (44-172)||(12996288-12996416)
chr6 (44-111)||(16461321-16461389)
chr6 (14-101)||(9078939-9079025)
chr6 (14-172)||(24130240-24130394)
chr6 (14-172)||(24635466-24635625)
chr6 (71-164)||(7536468-7536562)
chr6 (64-172)||(2660884-2660993)
chr6 (44-101)||(24130157-24130214)
[»] scaffold0014 (3 HSPs)
scaffold0014 (51-101)||(65122-65172)
scaffold0014 (51-101)||(65236-65286)
scaffold0014 (44-172)||(64937-65066)
[»] scaffold0050 (2 HSPs)
scaffold0050 (44-101)||(19234-19291)
scaffold0050 (64-172)||(19049-19158)
[»] scaffold0002 (1 HSPs)
scaffold0002 (20-101)||(331960-332041)
[»] scaffold0131 (1 HSPs)
scaffold0131 (44-100)||(11367-11423)


Alignment Details
Target: scaffold0003 (Bit Score: 166; Significance: 8e-89; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 14 - 223
Target Start/End: Original strand, 303814 - 304023
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatca 113  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||     
T  303814 ttcggatggaccactacaccactttatggaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaatctttaatcg 303913  T
Q  114 ttaatttttaatttttctgagtgaaccgtgacccaccatagcccatgaagggctccgcctcttaatcacaccatttaatattgttgagatgtcatgctca 213  Q
    ||||||||||||||||| |||||  |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  303914 ttaatttttaatttttccgagtgggccgtgacccaccctagcccatgaagggctccgcctctgaatcacaccatttaatattgttgagatgtcatgctca 304013  T
Q  214 aatagcattt 223  Q
    |||| |||||    
T  304014 aataacattt 304023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 208 - 300
Target Start/End: Original strand, 304145 - 304237
Alignment:
Q  208 tgctcaaatagcatttctaacttctaataatagtatgtcacaacannnnnnnataaaattaatattttttaacaatgaaaatgcattctaact 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||    
T  304145 tgctcaaatagcatttctaacttctaataatagtatgtcacaacatttttttataaaattaatattttttaacaatgaaaatgcattctaact 304237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 166; Significance: 8e-89; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 14 - 223
Target Start/End: Original strand, 20071209 - 20071418
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatca 113  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||     
T  20071209 ttcggatggaccactacaccactttatggaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaatctttaatcg 20071308  T
Q  114 ttaatttttaatttttctgagtgaaccgtgacccaccatagcccatgaagggctccgcctcttaatcacaccatttaatattgttgagatgtcatgctca 213  Q
    ||||||||||||||||| |||||  |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  20071309 ttaatttttaatttttccgagtgggccgtgacccaccctagcccatgaagggctccgcctctgaatcacaccatttaatattgttgagatgtcatgctca 20071408  T
Q  214 aatagcattt 223  Q
    |||| |||||    
T  20071409 aataacattt 20071418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 208 - 300
Target Start/End: Original strand, 20071540 - 20071632
Alignment:
Q  208 tgctcaaatagcatttctaacttctaataatagtatgtcacaacannnnnnnataaaattaatattttttaacaatgaaaatgcattctaact 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||    
T  20071540 tgctcaaatagcatttctaacttctaataatagtatgtcacaacatttttttataaaattaatattttttaacaatgaaaatgcattctaact 20071632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 175
Target Start/End: Original strand, 22578930 - 22579092
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatca 113  Q
    |||||||| ||||||| |||||||||||  |||||| |||| ||||||  ||||||||||| ||||||||| ||||||||  ||||||||| | | |||     
T  22578930 ttcggatgaaccactacaccactttatgggaatttggatcagccgaaacctaaaaccgacacaaaattgtacaaaatctcgtaaaataaacttatgatcg 22579029  T
Q  114 ttaatttttaatttttct-gagtgaaccgtgacccaccatagcccatgaagggctccgcctct 175  Q
    ||||||||  | |||||| | ||||  |||| |||||| |||||||||||||| |||||||||    
T  22579030 ttaattttatagttttctcgggtgagtcgtggcccaccctagcccatgaagggatccgcctct 22579092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 44 - 172
Target Start/End: Original strand, 19577206 - 19577334
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcattaatttttaatttttctgagtgaaccgtg 143  Q
    |||||| ||||||| |||| || |||||||| ||||||||||||||| |  ||||||| |  | ||||| ||||||||| ||||||| | |||  |||||    
T  19577206 aatttggatcaaccaaaatctagaaccgacacaaaattgtataaaatgttgcaaaatagatctataatcgttaattttttatttttccgggtgggccgtg 19577305  T
Q  144 acccaccatagcccatgaagggctccgcc 172  Q
     |||||| |||||||||||||||||||||    
T  19577306 gcccaccttagcccatgaagggctccgcc 19577334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 8074121 - 8074208
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    ||||||||| |||||| ||||||||  |  ||||||||||||||||||  |||||||||||| ||||||||||||||||| |||||||    
T  8074121 ttcggatgggccactacaccactttgcgggaatttgaatcaaccgaaacctaaaaccgacattaaattgtataaaatctcgcaaaata 8074208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 172
Target Start/End: Original strand, 9737752 - 9737861
Alignment:
Q  64 taaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcattaa-tttttaatttttctgagtgaaccgtgacccaccatagcccatgaa 162  Q
    ||||||||||| ||||||| |||||||||| ||||||| || | ||||| |||| ||||||||||||| | |||  ||||| ||||||  ||||||||||    
T  9737752 taaaaccgacacaaaattgcataaaatctcgcaaaatagacctataatcgttaattttttaatttttccgggtgggccgtggcccaccccagcccatgaa 9737851  T
Q  163 gggctccgcc 172  Q
    ||||||||||    
T  9737852 gggctccgcc 9737861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 37042579 - 37042636
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||||    
T  37042579 aatttgaatcaaccgaaatctaaaaccgatataaaattgtataaaatctcgcaaaata 37042636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 44 - 172
Target Start/End: Complemental strand, 43348766 - 43348637
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcattaattttt-aatttttctgagtgaaccgt 142  Q
    |||||| ||||||| |||  ||||||| ||| ||||||| |||||||||| |||||||||| | ||||| ||||||||| |||||||| | |||  ||||    
T  43348766 aatttggatcaaccaaaacataaaaccaacacaaaattgcataaaatctcgcaaaataaacctataatcgttaattttttaatttttccgggtgggccgt 43348667  T
Q  143 gacccaccatagcccatgaagggctccgcc 172  Q
    | ||| ||  ||||||||||||||||||||    
T  43348666 ggcccgccccagcccatgaagggctccgcc 43348637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 42 - 101
Target Start/End: Complemental strand, 10925756 - 10925697
Alignment:
Q  42 aaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||||| |||||||||||  ||||||||||||||| ||||||||||||||||||||||    
T  10925756 aaaatttggatcaaccgaaacctaaaaccgacataaatttgtataaaatctcacaaaata 10925697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 13013137 - 13013224
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    ||||| |||||||||| |||| |||  | ||||||| ||||||||| |  ||||||||||||||| ||||||||||||||||||||||    
T  13013137 ttcgggtggaccactataccaatttgcggaaatttggatcaaccgatacctaaaaccgacataaatttgtataaaatctcacaaaata 13013224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 93
Target Start/End: Original strand, 26296891 - 26296970
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctc 93  Q
    ||||| ||||| |||| ||||||||  |  ||||||||||||||||||| |||||||||||||||| |||||||||||||    
T  26296891 ttcgggtggactactacaccactttgcgggaatttgaatcaaccgaaatctaaaaccgacataaaaatgtataaaatctc 26296970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 172
Target Start/End: Original strand, 9596190 - 9596320
Alignment:
Q  43 aaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcatt-aatttttaatttttctgagtgaaccg 141  Q
    ||||||| ||||||  |||| ||||||||||| ||||||| |||||||||| ||||||| |||| ||||| || | |||||||||||| || |||  |||    
T  9596190 aaatttggatcaactaaaatataaaaccgacacaaaattgcataaaatctcgcaaaatagacatataatcgttgattttttaatttttttgggtgggccg 9596289  T
Q  142 tgacccaccatagcccatgaagggctccgcc 172  Q
    || ||||||  ||||  ||||||||||||||    
T  9596290 tggcccaccccagcctttgaagggctccgcc 9596320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 177
Target Start/End: Complemental strand, 20487104 - 20486970
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcattaa-tttttaatttttctgagtgaaccgt 142  Q
    |||||| |||| ||||||  ||||||||||| |||||||||||||||||  ||||||| || | | ||| |||| ||||||||||||  |||||  ||||    
T  20487104 aatttggatcagccgaaacctaaaaccgacacaaaattgtataaaatcttgcaaaatatacctatgatcgttaattttttaattttttcgagtgggccgt 20487005  T
Q  143 gacccaccatagcccatgaagggctccgcctctta 177  Q
    | |||| | ||||||||||||||||| ||| ||||    
T  20487004 ggcccagcttagcccatgaagggctctgccactta 20486970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 9596078 - 9596135
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||||||||||  |||  ||||||||||||||||||||||||||||||||||||||    
T  9596078 aatttgaatcaacacaaacctaaaaccgacataaaattgtataaaatctcacaaaata 9596135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 26785075 - 26785018
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||| ||||  ||||||||||||||||||||||||||||||||||||||    
T  26785075 aatttggatcaactgaaacctaaaaccgacataaaattgtataaaatctcacaaaata 26785018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 32304565 - 32304622
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||  |||||||||||||||||||||||||||||| |||||||    
T  32304565 aatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaata 32304622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 44 - 172
Target Start/End: Complemental strand, 43358542 - 43358413
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcatt-aatttttaatttttctgagtgaaccgt 142  Q
    |||||| ||||||| |||  ||||||||||| ||||||| |||||||||| ||||||| || | ||||| || | ||||| ||||||| | |||  ||||    
T  43358542 aatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacctataatcgttgattttttcatttttccgggtgggccgt 43358443  T
Q  143 gacccaccatagcccatgaagggctccgcc 172  Q
    | ||||||  ||||||||||||||||||||    
T  43358442 ggcccacctcagcccatgaagggctccgcc 43358413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 44 - 172
Target Start/End: Original strand, 8074264 - 8074394
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcattaattttt--aatttttctgagtgaaccg 141  Q
    |||||| ||||||| |||  ||||||||||| |||||||||||||||||| ||||||| || | ||||| || ||||||  || |||||   |||  |||    
T  8074264 aatttggatcaaccaaaacctaaaaccgacacaaaattgtataaaatctcgcaaaatagacctataatcgttgattttttaaaattttccaggtgggccg 8074363  T
Q  142 tgacccaccatagcccatgaagggctccgcc 172  Q
    || ||||||  ||||||||||||||||||||    
T  8074364 tggcccaccccagcccatgaagggctccgcc 8074394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 13084525 - 13084612
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    ||||| |||||||||| |||| |||  | ||||||| |||||| || |  ||||||||||||||| ||||||||||||||||||||||    
T  13084525 ttcgggtggaccactataccaatttgcggaaatttggatcaactgatacctaaaaccgacataaatttgtataaaatctcacaaaata 13084612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 25701304 - 25701390
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    ||||| |||||||||| |||| ||| ||  |||||| |||||||||||  |||||||||||| ||||||||||||||||| |||||||    
T  25701304 ttcgggtggaccactacaccaatttgtgggaatttggatcaaccgaaacctaaaaccgacat-aaattgtataaaatctcgcaaaata 25701390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 172
Target Start/End: Original strand, 26525225 - 26525384
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatca 113  Q
    ||||||||| |||||| ||||||||     |||||| ||||||| |||  ||||||||||| ||||||| | |||||||| ||||||| || | |||||     
T  26525225 ttcggatgggccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcaaaaaatctcgcaaaatagacctataatcg 26525324  T
Q  114 tt-aatttttaatttttctgagtgaaccgtgacccaccatagcccatgaagggctccgcc 172  Q
    || | ||||| ||||||| | |||  ||||| ||||||  ||||||||||||||||||||    
T  26525325 ttgatttttttatttttccgggtgggccgtggcccaccccagcccatgaagggctccgcc 26525384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 30773154 - 30773067
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    ||||| |||||||||| |||| |||  |  |||||| |||||||||||  ||||| |||||||||||||||||||||||| |||||||    
T  30773154 ttcgggtggaccactacaccaatttgcgggaatttggatcaaccgaaacctaaaatcgacataaaattgtataaaatctcgcaaaata 30773067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 75 - 169
Target Start/End: Original strand, 16285268 - 16285362
Alignment:
Q  75 taaaattgtataaaatctcacaaaataaacatttaatcattaatttttaatttttctgagtgaaccgtgacccaccatagcccatgaagggctcc 169  Q
    ||||||||| |||||||||||||||| ||| | |||| |||||||||| ||||||||  ||| ||||||  | |||  |||||||||||||||||    
T  16285268 taaaattgtttaaaatctcacaaaatgaacctataattattaattttttatttttctaggtggaccgtggtcgaccccagcccatgaagggctcc 16285362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 51 - 172
Target Start/End: Complemental strand, 16823256 - 16823134
Alignment:
Q  51 atcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcatt-aatttttaatttttctgagtgaaccgtgacccac 149  Q
    ||||||| |||  ||||||||||| ||||||| |||||||||| ||||||| || | ||||| || | ||||||||||||| |  ||  ||||| |||||    
T  16823256 atcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacctataatcgttgattttttaatttttccggatgggccgtggcccac 16823157  T
Q  150 catagcccatgaagggctccgcc 172  Q
    |  ||||||||||||||||||||    
T  16823156 cccagcccatgaagggctccgcc 16823134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 172
Target Start/End: Complemental strand, 3631371 - 3631262
Alignment:
Q  64 taaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcattaattttt-aatttttctgagtgaaccgtgacccaccatagcccatgaa 162  Q
    ||||||| ||| ||||||| |||||||||| ||||||| || | ||||| || |||||| |||||||| | |||  ||||| ||||||  ||||||||||    
T  3631371 taaaaccaacacaaaattgcataaaatctcgcaaaatagacctataatcgttgattttttaatttttccgggtgggccgtggcccaccccagcccatgaa 3631272  T
Q  163 gggctccgcc 172  Q
    ||||||||||    
T  3631271 gggctccgcc 3631262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 3631504 - 3631447
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| ||||||| ||| |||||| |||||||||||||||||||||||| |||||||    
T  3631504 aatttggatcaaccaaaacttaaaatcgacataaaattgtataaaatctcgcaaaata 3631447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 7440393 - 7440450
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| ||||||| |||  |||||||||||||||||||||||||||||| |||||||    
T  7440393 aatttggatcaaccaaaacctaaaaccgacataaaattgtataaaatctcgcaaaata 7440450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 172
Target Start/End: Complemental strand, 30773011 - 30772882
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcatt-aatttttaatttttctgagtgaaccgt 142  Q
    |||||||||||||| |||  ||||||||| | ||||||| |||||||||  ||||||| || | ||||| || | ||||||||||||  | |||| ||||    
T  30773011 aatttgaatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgattttttaattttttcgggtgagccgt 30772912  T
Q  143 gacccaccatagcccatgaagggctccgcc 172  Q
    | ||||||  | ||||||||||||||||||    
T  30772911 ggcccaccccaacccatgaagggctccgcc 30772882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 172
Target Start/End: Original strand, 41084580 - 41084734
Alignment:
Q  17 ggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcatt- 115  Q
    |||||| |||||| ||||||||  | ||||||| ||||| | |||  ||||| ||||| |||||| ||||||||||| ||||||| || | ||||| ||     
T  41084580 ggatgggccactacaccactttgcggaaatttggatcaatcaaaacctaaaatcgacacaaaattctataaaatctcgcaaaatagacctataatcgttg 41084679  T
Q  116 aatttttaatttttctgagtgaaccgtgacccaccatagcccatgaagggctccgcc 172  Q
    | ||||||||||||| | ||| |||  | ||||||  ||||||||||||||||||||    
T  41084680 attttttaatttttccgggtggacc--ggcccaccccagcccatgaagggctccgcc 41084734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 43348879 - 43348822
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||  ||||||||||||||||| |||||||||||| |||||||    
T  43348879 aatttggatcaaccgaaacctaaaaccgacataaaatcgtataaaatctcgcaaaata 43348822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 44 - 104
Target Start/End: Complemental strand, 43358655 - 43358595
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaac 104  Q
    |||||| |||||||| ||  |||||| ||||||||||||||||||||||| ||||||||||    
T  43358655 aatttggatcaaccgtaacctaaaacagacataaaattgtataaaatctcgcaaaataaac 43358595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 16823406 - 16823319
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    ||||| |||||||||| |||| |||  |  |||||| |||||||||||  |||||||||||||||||  ||||||||||| |||||||    
T  16823406 ttcgggtggaccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaatcatataaaatctcgcaaaata 16823319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 30062701 - 30062792
Alignment:
Q  31 accactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcattaattttt 122  Q
    ||||||||| ||||||||||||||||  ||| | |||||||||| ||| ||||||||||| ||| |||||| || | ||||| | |||||||    
T  30062701 accactttacgaaaatttgaatcaactaaaactaaaaaccgacacaaagttgtataaaatatcataaaatagacctataatcgtcaattttt 30062792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 30050097 - 30050195
Alignment:
Q  24 ccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcattaattttt 122  Q
    |||||| ||||||||| |||||||||||||||||| ||   ||||  |||| ||||||||||||||| ||  |||||| || | ||||| |||||||||    
T  30050097 ccactacaccactttacgaaaatttgaatcaaccgtaaccaaaaattgacacaaaattgtataaaatatcgtaaaatagacctataatcgttaattttt 30050195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 26525142 - 26525199
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||| ||||  | |||||||||||||||||||||||||||| |||||||    
T  26525142 aatttggatcaactgaaaccttaaaccgacataaaattgtataaaatctcgcaaaata 26525199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 41084494 - 41084543
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctc 93  Q
    ||||||||| ||||||||  |||||||||||||||| |||||||||||||    
T  41084494 aatttgaattaaccgaaacctaaaaccgacataaaaatgtataaaatctc 41084543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 171
Target Start/End: Complemental strand, 29390401 - 29390273
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcattaattttt-aatttttctgagtgaaccgt 142  Q
    |||||| ||||||| |||  ||||||| ||| ||||||| ||||||||||  |||||| || | ||||| || |||||| ||||||||   |||  ||||    
T  29390401 aatttggatcaaccaaaacataaaaccaacacaaaattgcataaaatctcgtaaaatacacctataatcgttgattttttaatttttccaggtgggccgt 29390302  T
Q  143 gacccaccatagcccatgaagggctccgc 171  Q
    | ||||||  |||||||||||||||||||    
T  29390301 ggcccaccccagcccatgaagggctccgc 29390273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 93
Target Start/End: Original strand, 20656853 - 20656932
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctc 93  Q
    |||||||||||||||| |||| |||  | ||||||| ||||||| |||  ||||||||| | ||||||| ||||||||||    
T  20656853 ttcggatggaccactacaccaatttgcggaaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatctc 20656932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 44 - 130
Target Start/End: Original strand, 32304678 - 32304765
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcatt-aatttttaatttttc 130  Q
    |||||| ||||||| |||| ||||||||||| ||||||| ||||||||||  |||||| || | ||||| || | |||||||||||||    
T  32304678 aatttggatcaaccaaaatataaaaccgacacaaaattgcataaaatctcgtaaaatagacttataatcgttgattttttaatttttc 32304765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 172
Target Start/End: Original strand, 13013279 - 13013409
Alignment:
Q  43 aaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcattaatttt-taatttttctgagtgaaccg 141  Q
    ||||||| ||||||| |||  |||||| || | |||||||  ||||||||| |||| || || | ||||| || ||||| ||||||||| | |||  |||    
T  13013279 aaatttggatcaaccaaaacataaaactgatacaaaattgcttaaaatctcgcaaattagacctataatcgttgattttttaatttttccgggtgggccg 13013378  T
Q  142 tgacccaccatagcccatgaagggctccgcc 172  Q
    || ||||||  ||||||||||||||||||||    
T  13013379 tggcccaccccagcccatgaagggctccgcc 13013409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 136
Target Start/End: Complemental strand, 10925665 - 10925548
Alignment:
Q  20 tggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcatt-aat 118  Q
    |||||||||| |||||||| |   |||||||||||||  |||  ||||||||| | ||||||  |||||||||| |||| || |||| ||||| || | |    
T  10925665 tggaccactacaccactttgtaggaatttgaatcaactaaaacataaaaccgatacaaaattacataaaatctcgcaaattagacatataatcgttgatt 10925566  T
Q  119 ttttaatttttctgagtg 136  Q
    |||||||||||| |||||    
T  10925565 ttttaatttttccgagtg 10925548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 130
Target Start/End: Complemental strand, 15374240 - 15374160
Alignment:
Q  51 atcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcatt-aatttttaatttttc 130  Q
    ||||||| |||  ||||||||||| ||||||| |||||||||| ||||||| || | ||||| || | |||||||||||||    
T  15374240 atcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacctataatcgttgattttttaatttttc 15374160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 172
Target Start/End: Original strand, 26297007 - 26297163
Alignment:
Q  17 ggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcatt- 115  Q
    |||||| |||||| ||||||||  |  |||||| ||||||| |||  ||||||||||| |||||| ||||| ||||  ||||||| || | ||||  ||     
T  26297007 ggatgggccactacaccactttgcgggaatttggatcaaccaaaacctaaaaccgacacaaaattatataagatcttgcaaaatagacctataattgttg 26297106  T
Q  116 aatttttaatttttctgagtgaaccgtgacccaccatagcccatgaagggctccgcc 172  Q
    | ||||||||||||  | ||| |||||| |||| |  ||| ||||||||||||||||    
T  26297107 attttttaattttttcgggtggaccgtggcccatcccagctcatgaagggctccgcc 26297163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 122
Target Start/End: Complemental strand, 41817615 - 41817507
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatca 113  Q
    ||||| ||| |||||| ||||||||    ||||||| ||||||| |||| |||||| ||||  |||||||||||||| || |||| || |||| | |||     
T  41817615 ttcgggtgggccactacaccactttgcagaaatttggatcaaccaaaatctaaaactgacactaaattgtataaaatatcgcaaagtagacatatgatcg 41817516  T
Q  114 ttaattttt 122  Q
    |||||||||    
T  41817515 ttaattttt 41817507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 3e-23; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 14 - 172
Target Start/End: Original strand, 1115034 - 1115193
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatca 113  Q
    ||||| ||| |||||| ||||||||    ||||||| ||||||| ||   ||||||||||| |||||||||||||||||| ||||||| || | |||| |    
T  1115034 ttcgggtgggccactacaccactttgcagaaatttggatcaaccaaatcataaaaccgacacaaaattgtataaaatctcgcaaaatagacctataataa 1115133  T
Q  114 ttaatttt-taatttttctgagtgaaccgtgacccaccatagcccatgaagggctccgcc 172  Q
    || ||||| ||||||||| ||||| |||||| ||||||  ||||||||||||||||||||    
T  1115134 ttgattttttaatttttccgagtggaccgtggcccaccccagcccatgaagggctccgcc 1115193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 11935382 - 11935487
Alignment:
Q  24 ccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcattaattttta 123  Q
    |||||| ||||||||| || |||||| ||||||| |||| ||||||||||| |||||||||||||||||| ||||||| || | ||||| ||||||||||    
T  11935382 ccactacaccactttacgagaatttggatcaaccaaaatctaaaaccgacacaaaattgtataaaatctcgcaaaatagacttataatcgttaattttta 11935481  T
Q  124 attttt 129  Q
    | ||||    
T  11935482 aatttt 11935487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 12995241 - 12995154
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    ||||| |||||||||| |||| |||  | |||||||||||||||||||  ||||||||||||||| ||||||||||||| ||||||||    
T  12995241 ttcgggtggaccactacaccaatttgcggaaatttgaatcaaccgaaacctaaaaccgacataaatttgtataaaatcttacaaaata 12995154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 1020981 - 1021038
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||    
T  1020981 aatttgaatcaaccgaaacctaaaaccgacataaaattgtataaaatctctcaaaata 1021038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 44 - 172
Target Start/End: Complemental strand, 34983408 - 34983279
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcattaattttt-aatttttctgagtgaaccgt 142  Q
    |||||| ||||||| |||  ||||||||||| ||||||| |||||||||| ||||||| || | ||||| || |||||| |||||||| | |||  ||||    
T  34983408 aatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacctataatcgttgatttttcaatttttccgggtgggccgt 34983309  T
Q  143 gacccaccatagcccatgaagggctccgcc 172  Q
    | ||||||  ||||||||||||||||||||    
T  34983308 ggcccaccccagcccatgaagggctccgcc 34983279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 44 - 172
Target Start/End: Original strand, 44545755 - 44545884
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcatt-aatttttaatttttctgagtgaaccgt 142  Q
    |||||| ||||||| |||| ||||||||||| ||||||||||||||| || ||||||| || | ||||| || | ||||| ||||||| | ||| |||||    
T  44545755 aatttggatcaaccaaaatataaaaccgacacaaaattgtataaaatatcgcaaaatagacctataatcgttgatttttttatttttccgggtggaccgt 44545854  T
Q  143 gacccaccatagcccatgaagggctccgcc 172  Q
    | ||||||  | ||||||||||||||||||    
T  44545855 ggcccaccccaacccatgaagggctccgcc 44545884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 102
Target Start/End: Complemental strand, 38527418 - 38527360
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataa 102  Q
    |||||| |||||||||||  |||||||||||||||||||||||||||||| ||||||||    
T  38527418 aatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaataa 38527360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 11935288 - 11935345
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||| |||||||||||||||||||||||||| ||| |||||||    
T  11935288 aatttggatcaaccgaaatctaaaaccgacataaaattgtataaaacctcgcaaaata 11935345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 16194497 - 16194440
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||  |||||||||||||||||||||||||||||| |||||||    
T  16194497 aatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaata 16194440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 44 - 172
Target Start/End: Original strand, 22674766 - 22674895
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcatt-aatttttaatttttctgagtgaaccgt 142  Q
    |||||| |||| ||||||  ||||||||||| ||||||| |||||||||| ||||||| || | ||||| || | ||||||||||||| | |||  ||||    
T  22674766 aatttggatcagccgaaacctaaaaccgacacaaaattgcataaaatctcgcaaaatagacctataatcgttgattttttaatttttccgggtgggccgt 22674865  T
Q  143 gacccaccatagcccatgaagggctccgcc 172  Q
    |  |||||  ||||||||||||||||||||    
T  22674866 ggtccaccccagcccatgaagggctccgcc 22674895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 44 - 172
Target Start/End: Complemental strand, 23869795 - 23869666
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcatt-aatttttaatttttctgagtgaaccgt 142  Q
    |||||| ||||||| |||  ||||||||||| ||||||| |||||||||| ||||||| || | ||||| || | ||||||||||||| | |||  ||||    
T  23869795 aatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacctataatcgttgattttttaatttttcggggtgggccgt 23869696  T
Q  143 gacccaccatagcccatgaagggctccgcc 172  Q
    | ||||||  |||||||| |||||||||||    
T  23869695 ggcccaccccagcccatggagggctccgcc 23869666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 23869908 - 23869851
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||  |||||||||||||||||||||||||||||| |||||||    
T  23869908 aatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaata 23869851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 34983521 - 34983464
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||  |||||||||||||||||||||||||||||| |||||||    
T  34983521 aatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaata 34983464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 64 - 172
Target Start/End: Original strand, 36436228 - 36436337
Alignment:
Q  64 taaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcattaa-tttttaatttttctgagtgaaccgtgacccaccatagcccatgaa 162  Q
    ||||||||||| ||||||| ||||||| || ||||||| || | ||||| |||| |||||||||||| || |||  ||||| ||||||  ||||||||||    
T  36436228 taaaaccgacacaaaattgcataaaatatcgcaaaatagacttataatcgttaattttttaatttttttgggtgggccgtggcccaccccagcccatgaa 36436327  T
Q  163 gggctccgcc 172  Q
    ||||||||||    
T  36436328 gggctccgcc 36436337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 42016748 - 42016691
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| ||||||| ||| ||||||||||||||||||||||||||||||| |||||||    
T  42016748 aatttggatcaaccaaaacttaaaaccgacataaaattgtataaaatctcgcaaaata 42016691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 44545642 - 44545699
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| ||||||||||| |||||||| |||||||||||||||||||||| |||||||    
T  44545642 aatttggatcaaccgaaacttaaaaccaacataaaattgtataaaatctcgcaaaata 44545699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 2249856 - 2249769
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    ||||| |||||||||| |||| |||  |  |||||| |||||||||||  ||||||||||||||||| |||||||||||| |||||||    
T  2249856 ttcgggtggaccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaatcgtataaaatctcgcaaaata 2249769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 43 - 101
Target Start/End: Original strand, 13615875 - 13615933
Alignment:
Q  43 aaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    ||||||| ||||||| |||  |||||||||||||||||||||||||||||| |||||||    
T  13615875 aaatttggatcaaccaaaacctaaaaccgacataaaattgtataaaatctcgcaaaata 13615933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 51 - 101
Target Start/End: Original strand, 26860582 - 26860632
Alignment:
Q  51 atcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||||||||  |||||||||||||||||||||||||||||| |||||||    
T  26860582 atcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaata 26860632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 44 - 106
Target Start/End: Original strand, 31643637 - 31643699
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacat 106  Q
    |||||||||||  ||||| |||||||||||||||||||||||||||||||  |||||| ||||    
T  31643637 aatttgaatcaggcgaaacttaaaaccgacataaaattgtataaaatctcgtaaaatagacat 31643699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 7366396 - 7366339
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| ||||| |||||  |||||||||||||||||||||||||||||| |||||||    
T  7366396 aatttggatcaatcgaaacctaaaaccgacataaaattgtataaaatctcgcaaaata 7366339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 26293405 - 26293348
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||  ||||||||||||||||| |||||||||||| |||||||    
T  26293405 aatttggatcaaccgaaacctaaaaccgacataaaatcgtataaaatctcgcaaaata 26293348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 172
Target Start/End: Original strand, 34494521 - 34494630
Alignment:
Q  64 taaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcattaatttt-taatttttctgagtgaaccgtgacccaccatagcccatgaa 162  Q
    ||||||||| | ||||||| |||||||||| ||||| | || | ||||| || ||||| |||||||||||  || |||||| |||||| ||||||||||     
T  34494521 taaaaccgatacaaaattgcataaaatctcgcaaaagagacctataatcgttgattttttaatttttctggatggaccgtggcccaccctagcccatgat 34494620  T
Q  163 gggctccgcc 172  Q
    ||||||||||    
T  34494621 gggctccgcc 34494630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 36436095 - 36436152
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||  ||||| |||||||||||||||||||||||| |||||||    
T  36436095 aatttggatcaaccgaaacctaaaatcgacataaaattgtataaaatctcgcaaaata 36436152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 172
Target Start/End: Complemental strand, 38527286 - 38527177
Alignment:
Q  64 taaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcatt-aatttttaatttttctgagtgaaccgtgacccaccatagcccatgaa 162  Q
    ||||||||| | ||||||| |||||||||||||||||| || | ||||| || | ||||| ||||||| | |||  ||||| ||||||  ||||||||||    
T  38527286 taaaaccgatacaaaattgcataaaatctcacaaaatagacctataatcgttgatttttttatttttccgggtgggccgtggcccaccccagcccatgaa 38527187  T
Q  163 gggctccgcc 172  Q
    ||||||||||    
T  38527186 gggctccgcc 38527177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 172
Target Start/End: Complemental strand, 38763846 - 38763717
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcattaattttt-aatttttctgagtgaaccgt 142  Q
    |||||| ||||||| |||  ||||||| ||| ||||||| |||||||||| | ||||| || | ||||| || |||||| |||||||| | |||  ||||    
T  38763846 aatttggatcaaccaaaacataaaaccaacacaaaattgcataaaatctcgctaaatagacctataatcgttgattttttaatttttccgggtgggccgt 38763747  T
Q  143 gacccaccatagcccatgaagggctccgcc 172  Q
    | ||||||  ||||||||||||||||||||    
T  38763746 ggcccacctcagcccatgaagggctccgcc 38763717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 38763959 - 38763902
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| ||||||| |||  |||||||||||||||||||||||||||||| |||||||    
T  38763959 aatttggatcaaccaaaacctaaaaccgacataaaattgtataaaatctcgcaaaata 38763902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 172
Target Start/End: Complemental strand, 41699316 - 41699187
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcattaattttt-aatttttctgagtgaaccgt 142  Q
    |||||| ||||||| |||  ||||||| ||| ||||||| |||||||||| ||||||| || | ||||| || |||||| |||||||| |  ||  ||||    
T  41699316 aatttggatcaaccaaaacataaaaccaacacaaaattgcataaaatctcgcaaaatatacctataatcgttgattttttaatttttccggatgggccgt 41699217  T
Q  143 gacccaccatagcccatgaagggctccgcc 172  Q
    ||||||||  |||||||| |||||||||||    
T  41699216 gacccacccgagcccatggagggctccgcc 41699187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 43471450 - 43471567
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatca 113  Q
    ||||| ||||| |||| ||||||||  || |||||| ||||| | |||  ||||||||||| |||||||||||||||||| ||||||| || | |||||     
T  43471450 ttcgggtggactactacaccactttgcgagaatttggatcaatcaaaacctaaaaccgacacaaaattgtataaaatctcgcaaaatagacctataatcg 43471549  T
Q  114 tt-aatttttaatttttc 130  Q
    || | |||||||||||||    
T  43471550 ttgattttttaatttttc 43471567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 64 - 172
Target Start/End: Original strand, 1021114 - 1021225
Alignment:
Q  64 taaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcatt-aatttttaatttttct-gagt-gaaccgtgacccaccatagcccatg 160  Q
    ||||||||||| |||||||||||||||||| ||||||| || | |||| ||| | |||||||||||||| | || |  ||||| ||||||  ||||||||    
T  1021114 taaaaccgacacaaaattgtataaaatctcgcaaaatagacctataataattgattttttaatttttctcgggtggggccgtggcccaccccagcccatg 1021213  T
Q  161 aagggctccgcc 172  Q
    ||||||||||||    
T  1021214 aagggctccgcc 1021225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 172
Target Start/End: Original strand, 6750002 - 6750161
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatca 113  Q
    ||||| |||| ||||| ||||||||    ||||||| ||||| | |||  ||||||| ||| ||||||| |||||||||||  ||||| || | |||||     
T  6750002 ttcgggtggatcactacaccactttgcagaaatttggatcaatcaaaacataaaaccaacacaaaattgcataaaatctcaataaatagacctataatcg 6750101  T
Q  114 ttaattttt-aatttttctgagtgaaccgtgacccaccatagcccatgaagggctccgcc 172  Q
    || |||||| |||||||| | |||  ||||| ||||||  ||||||||||||||||||||    
T  6750102 ttgatttttaaatttttccgggtgggccgtggcccaccccagcccatgaagggctccgcc 6750161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 11765069 - 11764982
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    ||||| |||||||||| |||| |||  |  |||||| |||| | ||||  |||||||||||||||||||||||||||||| |||||||    
T  11765069 ttcgggtggaccactacaccaatttgcgggaatttggatcagctgaaacataaaaccgacataaaattgtataaaatctcgcaaaata 11764982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 44 - 130
Target Start/End: Complemental strand, 26293292 - 26293205
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcattaa-tttttaatttttc 130  Q
    |||||| ||||||| |||  ||||||||||| ||||||| |||||||||| ||||||| || | ||||| |||| |||||||||||||    
T  26293292 aatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacctataatcgttaattttttaatttttc 26293205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 31392821 - 31392734
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    ||||| ||| |||||| |||| |||  || |||| | ||||| |||||  |||||||||||||||||||||||||||||| |||||||    
T  31392821 ttcgggtgggccactacaccaatttgcgagaattgggatcaatcgaaacctaaaaccgacataaaattgtataaaatctcgcaaaata 31392734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 172
Target Start/End: Complemental strand, 2249706 - 2249584
Alignment:
Q  51 atcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcatt-aatttttaatttttctgagtgaaccgtgacccac 149  Q
    ||||||| |||  ||||||||||| ||||||| |||||||||| ||||||| |  | |||||||| | ||||||||||||  | |||   |||| |||||    
T  2249706 atcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcattgattttttaattttttcgggtgggtcgtggcccac 2249607  T
Q  150 catagcccatgaagggctccgcc 172  Q
    |  ||||||||||||||||||||    
T  2249606 cccagcccatgaagggctccgcc 2249584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 101
Target Start/End: Original strand, 3836259 - 3836309
Alignment:
Q  51 atcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| ||||  |||||| |||||||||||||||||||||||||||||||    
T  3836259 atcaactgaaacctaaaacagacataaaattgtataaaatctcacaaaata 3836309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 1114951 - 1115008
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||  ||||| | |||||||||||||||||||||| |||||||    
T  1114951 aatttggatcaaccgaaacctaaaatcaacataaaattgtataaaatctcgcaaaata 1115008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 6749919 - 6749976
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| ||||||| |||  ||||||||||||||||||||||||||| || |||||||    
T  6749919 aatttggatcaaccaaaacctaaaaccgacataaaattgtataaaatatcgcaaaata 6749976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 100
Target Start/End: Original strand, 29141949 - 29142013
Alignment:
Q  36 tttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaat 100  Q
    ||||||| |||||| |||||||||||| ||||| ||||| || |||||||||||| || ||||||    
T  29141949 tttatgagaatttggatcaaccgaaatctaaaatcgacacaacattgtataaaatatcgcaaaat 29142013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 44 - 130
Target Start/End: Complemental strand, 11764926 - 11764839
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcatt-aatttttaatttttc 130  Q
    |||||||||||||| |||  ||||||||||| ||| |||||||||||||  ||||||| || | ||||| || | |||||||||||||    
T  11764926 aatttgaatcaaccaaaacataaaaccgacacaaagttgtataaaatcttgcaaaatagacctataatcgttgattttttaatttttc 11764839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 101
Target Start/End: Original strand, 28745413 - 28745463
Alignment:
Q  51 atcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    ||||||| |||| |||||||| ||||||||| ||||||||||| |||||||    
T  28745413 atcaaccaaaatctaaaaccggcataaaattatataaaatctcgcaaaata 28745463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 122
Target Start/End: Complemental strand, 31392679 - 31392601
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcattaattttt 122  Q
    |||||| ||||||| |||  ||||||||||| ||||||| ||||||||| |||||||| || | ||||| || ||||||    
T  31392679 aatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctaacaaaatagacttataatcgttgattttt 31392601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 93
Target Start/End: Complemental strand, 32100084 - 32100014
Alignment:
Q  23 accactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctc 93  Q
    ||||||| |||||||| ||  |||||  |||||||||||  |||||| |||| ||||||||||||||||||    
T  32100084 accactacaccactttgtgggaatttagatcaaccgaaacctaaaactgacacaaaattgtataaaatctc 32100014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 122
Target Start/End: Complemental strand, 42016635 - 42016557
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcattaattttt 122  Q
    |||||| ||||||| |||  ||||||| ||| ||||||| |||||||||||||||||| || | ||||| || ||||||    
T  42016635 aatttggatcaaccaaaacataaaaccaacacaaaattgcataaaatctcacaaaatagacctataatcgttgattttt 42016557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 3836366 - 3836415
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctc 93  Q
    |||||| ||||||| |||  ||||||||||| ||||||||||||||||||    
T  3836366 aatttggatcaaccaaaacctaaaaccgacacaaaattgtataaaatctc 3836415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 172
Target Start/End: Original strand, 13615989 - 13616118
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcattaatttt-taatttttctgagtgaaccgt 142  Q
    |||||| ||||||| |||  ||||| | ||| ||||||| |||||||||| ||||||| || | ||||| || ||||| ||||||||| | |||  ||||    
T  13615989 aatttggatcaaccaaaacataaaaacaacacaaaattgcataaaatctcgcaaaatagacctataatcgttgattttttaatttttccgggtgggccgt 13616088  T
Q  143 gacccaccatagcccatgaagggctccgcc 172  Q
    | ||||||  |||||||||| | |||||||    
T  13616089 ggcccaccccagcccatgaaagactccgcc 13616118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 26860668 - 26860745
Alignment:
Q  24 ccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||| |  ||||||| ||||||| |||  |||||||||||  |||||| |||||||||| |||||||    
T  26860668 ccactacaccactttgtagaaatttggatcaaccaaaacataaaaccgacacgaaattgcataaaatctcgcaaaata 26860745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 2077649 - 2077565
Alignment:
Q  17 ggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    ||||| |||||||  ||||||| ||  |||||  |||| ||||||  ||||||||||| ||||||||||| |||||| |||||||    
T  2077649 ggatgaaccactaccccactttgtgggaatttagatcagccgaaagctaaaaccgacacaaaattgtatagaatctcgcaaaata 2077565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 98
Target Start/End: Original strand, 29035408 - 29035480
Alignment:
Q  26 actaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaa 98  Q
    |||| ||||||||  ||||||||  |||||||||||  ||||| ||||| ||| ||||| |||||||||||||    
T  29035408 actacaccactttgcgaaaatttagatcaaccgaaacctaaaatcgacacaaagttgtagaaaatctcacaaa 29035480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 1e-22; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 43 - 172
Target Start/End: Complemental strand, 52202115 - 52201985
Alignment:
Q  43 aaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcatt-aatttttaatttttctgagtgaaccg 141  Q
    ||||||| ||||||| |||  ||||||||||| |||||||||||||||||| ||||||| || | ||||| || | ||||||||||||| | |||  |||    
T  52202115 aaatttggatcaaccaaaacataaaaccgacacaaaattgtataaaatctcgcaaaatagacctataatcgttgattttttaatttttccgggtgggccg 52202016  T
Q  142 tgacccaccatagcccatgaagggctccgcc 172  Q
    |||||||||  ||||||||||||||||||||    
T  52202015 tgacccaccccagcccatgaagggctccgcc 52201985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 50527517 - 50527604
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    ||||| |||||||||| |||| |||  || |||||| |||||||||||  |||||||||||||||||||||||||||||| |||||||    
T  50527517 ttcgggtggaccactacaccaatttgcgagaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaata 50527604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 172
Target Start/End: Original strand, 29126040 - 29126199
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatca 113  Q
    ||||||||| |||||| ||||||||     |||||  ||||||| |||  ||||||||||| ||||||| |||||||||| ||||||| || | |||||     
T  29126040 ttcggatgggccactacaccactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacctataatcg 29126139  T
Q  114 tt-aatttttaatttttctgagtgaaccgtgacccaccatagcccatgaagggctccgcc 172  Q
    || | ||||||||||||| | |||  ||||| ||||||  ||||||||||||||||||||    
T  29126140 ttgattttttaatttttccgggtgggccgtggcccaccccagcccatgaagggctccgcc 29126199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 52499200 - 52499283
Alignment:
Q  20 tggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaa 103  Q
    |||||||||| ||||||||  | ||||||  |||| ||||||||||||||| ||| |||||||||||||||||| |||||||||    
T  52499200 tggaccactacaccactttgcggaaatttagatcagccgaaatttaaaaccaacacaaaattgtataaaatctcgcaaaataaa 52499283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 172
Target Start/End: Original strand, 32270946 - 32271073
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcatt-aatttttaatttttctgagtgaaccgt 142  Q
    |||||| ||||||| |||| ||||||||||| ||||||| |||||||||| ||||||| |||  |||||||| | ||||||||||||| | |||  | ||    
T  32270946 aatttggatcaaccaaaatataaaaccgacacaaaattgcataaaatctcgcaaaatagaca--taatcattgattttttaatttttccgggtgggctgt 32271043  T
Q  143 gacccaccatagcccatgaagggctccgcc 172  Q
    | ||||||  |||||||||| |||||||||    
T  32271044 ggcccaccccagcccatgaaaggctccgcc 32271073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 11232068 - 11232125
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||  |||||||||||||||||||||||||||||| |||||||    
T  11232068 aatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaata 11232125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 13594787 - 13594844
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||  |||||||||||||||||||||||||||||| |||||||    
T  13594787 aatttggatcaaccgaaacataaaaccgacataaaattgtataaaatctcgcaaaata 13594844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 22729465 - 22729408
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||  |||||||||||||||||||||||||||||| |||||||    
T  22729465 aatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaata 22729408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 28952305 - 28952362
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||  |||||||||||||||||||||||||||||| |||||||    
T  28952305 aatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaata 28952362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 32270833 - 32270890
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||  |||||||||||||||||||||||||||||| |||||||    
T  32270833 aatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaata 32270890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 36633732 - 36633675
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||| |||||||||||||||||||||||| ||||| |||||||    
T  36633732 aatttggatcaaccgaaatctaaaaccgacataaaattgtataatatctcgcaaaata 36633675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 44254514 - 44254571
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||  |||||||||||||||||||||||||||||| |||||||    
T  44254514 aatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaata 44254571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 49657125 - 49657182
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||  |||||||||||||||||||||||||||||| |||||||    
T  49657125 aatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaata 49657182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 172
Target Start/End: Original strand, 28952416 - 28952547
Alignment:
Q  42 aaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcatt-aatttttaatttttctgagtgaacc 140  Q
    |||||||| ||||||| |||  ||||||||||| ||||||| |||||||||| ||||||| ||   ||||| || | |||||||||||||   ||| | |    
T  28952416 aaaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacccataatcgttgattttttaatttttccaggtggatc 28952515  T
Q  141 gtgacccaccatagcccatgaagggctccgcc 172  Q
    ||| ||||||  ||||||||||||||||||||    
T  28952516 gtggcccaccccagcccatgaagggctccgcc 28952547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 29125927 - 29126014
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    ||||||||| |||||| |||| |||  |  |||||| |||||||||||  ||||||||||||||||| |||||||||||| |||||||    
T  29125927 ttcggatgggccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaatcgtataaaatctcgcaaaata 29126014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 44 - 130
Target Start/End: Original strand, 44254627 - 44254714
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcatt-aatttttaatttttc 130  Q
    |||||||||||||| |||  ||||||||||| ||||||| |||||||||| ||||||| | || |||||||| | |||||||||||||    
T  44254627 aatttgaatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatatataatcattgattttttaatttttc 44254714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 1092791 - 1092848
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||  |||||||||| ||||||||||||||||||| |||||||    
T  1092791 aatttggatcaaccgaaacctaaaaccgacgtaaaattgtataaaatctcgcaaaata 1092848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 170
Target Start/End: Original strand, 1092874 - 1093031
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatca 113  Q
    ||||| ||| |||||| |||||||||    |||||| ||||||| |||  ||||||| ||| ||||||| |||||||||| ||||||| || | || ||     
T  1092874 ttcgggtgggccactacaccactttacaggaatttggatcaaccaaaacataaaacccacacaaaattgcataaaatctcgcaaaatagacttatagtcg 1092973  T
Q  114 ttaatttt-taatttttctgagtgaaccgtgacccaccatagcccatgaagggctccg 170  Q
    || ||||| ||||||||| | |||  ||||| ||||||  ||||||||||||||||||    
T  1092974 ttgattttttaatttttccgggtgggccgtggcccacctcagcccatgaagggctccg 1093031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 12251421 - 12251478
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||| ||||| ||||||||||||||||||| |||| |||||||    
T  12251421 aatttggatcaaccgaaatctaaaatcgacataaaattgtataaattctcgcaaaata 12251478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 168
Target Start/End: Original strand, 12251534 - 12251659
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcattaattttt-aatttttctgagtgaaccgt 142  Q
    |||||| ||||||| |||  ||||| ||||| |||||| ||||||||||||||||||| || | ||||| || |||||| |||||||| | |||  ||||    
T  12251534 aatttggatcaaccaaaacataaaatcgacacaaaattatataaaatctcacaaaatagacctataatcgttgatttttaaatttttccgggtgggccgt 12251633  T
Q  143 gacccaccatagcccatgaagggctc 168  Q
    |  |||||  ||||||||||||||||    
T  12251634 ggtccaccccagcccatgaagggctc 12251659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 172
Target Start/End: Complemental strand, 18163850 - 18163721
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcattaattttta-atttttctgagtgaaccgt 142  Q
    |||||| ||||||| |||  ||||||||| | ||||||| |||||||||| ||||||| || | ||||| || ||||||  ||||||| | |||  ||||    
T  18163850 aatttggatcaaccaaaacataaaaccgatacaaaattgaataaaatctcgcaaaatagacctataatcgttgatttttttatttttccgggtgggccgt 18163751  T
Q  143 gacccaccatagcccatgaagggctccgcc 172  Q
    | ||||||  ||||||||||||||||||||    
T  18163750 ggcccaccccagcccatgaagggctccgcc 18163721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 129
Target Start/End: Original strand, 21259461 - 21259546
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcattaatttttaattttt 129  Q
    |||||||||||||| |||  ||||| ||||| ||||||| |||||||||||||||||| || | ||||| || |||||||| ||||    
T  21259461 aatttgaatcaaccaaaacataaaatcgacacaaaattgcataaaatctcacaaaatagacctataatcgttgatttttaaatttt 21259546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 35084038 - 35083981
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||  ||||||| |||||||||||||||||||||| |||||||    
T  35084038 aatttggatcaaccgaaacctaaaaccaacataaaattgtataaaatctcgcaaaata 35083981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 172
Target Start/End: Complemental strand, 36633619 - 36633490
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcatt-aatttttaatttttctgagtgaaccgt 142  Q
    |||||| ||||||| |||  ||||| ||| | |||||||||||||||||||||||||| || | ||||| || | ||||||||||||| |  ||   |||    
T  36633619 aatttggatcaaccaaaacataaaatcgatacaaaattgtataaaatctcacaaaatagacctataatcgttgattttttaatttttccggatgggtcgt 36633520  T
Q  143 gacccaccatagcccatgaagggctccgcc 172  Q
    | ||||||  ||||||||||||||||||||    
T  36633519 ggcccaccccagcccatgaagggctccgcc 36633490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 172
Target Start/End: Original strand, 50527630 - 50527789
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatca 113  Q
    |||||||||||||||| ||||||||     |||||| ||||||| |||  ||||||||| | ||||||| |||||||||| ||||||| |  | ||| |     
T  50527630 ttcggatggaccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatctcgcaaaatagaactataaacg 50527729  T
Q  114 tt-aatttttaatttttctgagtgaaccgtgacccaccatagcccatgaagggctccgcc 172  Q
    || | ||||||||||||  | |||  ||||| ||||||  ||||||||||||||||||||    
T  50527730 ttgattttttaattttttcgggtgggccgtggcccaccccagcccatgaagggctccgcc 50527789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 136
Target Start/End: Original strand, 11232151 - 11232272
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatca 113  Q
    ||||| ||| |||||| ||||||||   | |||||| ||||||| |||  ||||||||||| ||||||| |||||||||| ||||||| || | ||||||    
T  11232151 ttcgggtgggccactacaccactttgcaagaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacctataatca 11232250  T
Q  114 ttaatttttaatttttctgagtg 136  Q
    ||  |||||| |||||| |||||    
T  11232251 tt-ttttttactttttcggagtg 11232272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 122
Target Start/End: Complemental strand, 45045341 - 45045263
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcattaattttt 122  Q
    |||||| |||||||||||| ||||||| ||| |||||| | ||||||||| |||||||||  | |||||||| ||||||    
T  45045341 aatttggatcaaccgaaatctaaaaccaacaaaaaattatttaaaatctcgcaaaataaatctataatcattgattttt 45045263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 172
Target Start/End: Original strand, 7160317 - 7160446
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcattaatttt-taatttttctgagtgaaccgt 142  Q
    |||||| || ||||||||  |||||| |||| ||||||  |||||||||| ||||||| || | ||||| || ||||| ||||||||| | |||  ||||    
T  7160317 aatttggattaaccgaaacctaaaactgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttttaatttttccgggtgggccgt 7160416  T
Q  143 gacccaccatagcccatgaagggctccgcc 172  Q
    | ||||||  |||||||||| |||||||||    
T  7160417 ggcccaccccagcccatgaaaggctccgcc 7160446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 16908732 - 16908789
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| ||||| |||||  |||||||||||||||||||||||||||||  |||||||    
T  16908732 aatttggatcaatcgaaacctaaaaccgacataaaattgtataaaatctagcaaaata 16908789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 21259234 - 21259291
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||  |||||||||||||||||| ||||||||||  |||||||    
T  21259234 aatttggatcaaccgaaacctaaaaccgacataaaattatataaaatctagcaaaata 21259291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 21259348 - 21259405
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||  |||||||||||||||||| ||||||||||  |||||||    
T  21259348 aatttggatcaaccgaaacctaaaaccgacataaaattatataaaatctagcaaaata 21259405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 172
Target Start/End: Complemental strand, 22729352 - 22729223
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcatt-aatttttaatttttctgagtgaaccgt 142  Q
    |||||| ||||||| |||  ||||||||||| ||||||| ||||||||||  |||||| || | || || || | ||||||||||||| | |||  ||||    
T  22729352 aatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgaaaaatagacctatagtcgttgattttttaatttttccgggtgggccgt 22729253  T
Q  143 gacccaccatagcccatgaagggctccgcc 172  Q
    | ||||||  ||||||| ||||||||||||    
T  22729252 ggcccaccccagcccattaagggctccgcc 22729223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 25246251 - 25246308
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||  |||||  ||||||||||||||||||||||| |||||||    
T  25246251 aatttggatcaaccgaaacctaaaaaagacataaaattgtataaaatctcgcaaaata 25246308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 35083955 - 35083838
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatca 113  Q
    ||||| |||||||||| |||||||||    |||||| ||||||| |||  ||||||||||| ||||||| ||||||||||  |||||  || | ||||||    
T  35083955 ttcgggtggaccactacaccactttacaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgtaaaattgacctataatca 35083856  T
Q  114 tta-atttttaatttttc 130  Q
    |||  |||||||||||||    
T  35083855 ttagttttttaatttttc 35083838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 172
Target Start/End: Original strand, 52571451 - 52571580
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcattaatttt-taatttttctgagtgaaccgt 142  Q
    |||||| ||||||| |||  ||||||||| | ||||||| ||||||| || |||| || || | ||||| || ||||| ||||||||| | |||  ||||    
T  52571451 aatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatatcgcaaattagacctataatcgttgattttttaatttttccgggtgggccgt 52571550  T
Q  143 gacccaccatagcccatgaagggctccgcc 172  Q
    | ||||||  ||||||||||||||||||||    
T  52571551 ggcccaccccagcccatgaagggctccgcc 52571580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 31174556 - 31174632
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaat 90  Q
    |||||||| ||||||| ||||||||   | |||||| ||||||| |||  ||||||||||| |||||||||||||||    
T  31174556 ttcggatgaaccactacaccactttgctagaatttggatcaaccaaaacctaaaaccgacacaaaattgtataaaat 31174632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 122
Target Start/End: Complemental strand, 34660908 - 34660800
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatca 113  Q
    ||||| |||||||||| ||||||||   |||||||| |||| || |||  ||||||||||| |||||| |||||||||||  |||||| || | | |||     
T  34660908 ttcgggtggaccactacaccactttgcaaaaatttggatcagccaaaacctaaaaccgacacaaaattatataaaatctcgtaaaatagacctatgatcg 34660809  T
Q  114 ttaattttt 122  Q
    |||||||||    
T  34660808 ttaattttt 34660800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 13594870 - 13594957
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    ||||| ||| |||||| |||||||| |   ||||||||||| || |||  ||||||||||| ||||||| |||||||||| |||||||    
T  13594870 ttcgggtgggccactacaccactttgtaggaatttgaatcagccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaata 13594957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 27742648 - 27742561
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    ||||||| | |||||| ||||||||    ||||||| ||||||| |||  ||||||||||| ||||||| |||||||||| |||||||    
T  27742648 ttcggataggccactacaccactttgcagaaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctctcaaaata 27742561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 27742761 - 27742674
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    ||||| ||| |||||| |||| |||| |  |||| | |||||||||||  ||||| |||||||||||||||||||||||  |||||||    
T  27742761 ttcgggtgggccactacaccaatttacgggaattgggatcaaccgaaacctaaaaacgacataaaattgtataaaatcttgcaaaata 27742674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 93
Target Start/End: Complemental strand, 52202220 - 52202178
Alignment:
Q  51 atcaaccgaaatttaaaaccgacataaaattgtataaaatctc 93  Q
    |||||| ||||  ||||||||||||||||||||||||||||||    
T  52202220 atcaactgaaacctaaaaccgacataaaattgtataaaatctc 52202178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 45045435 - 45045398
Alignment:
Q  64 taaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    ||||||| |||||||||||||||||||||| |||||||    
T  45045435 taaaaccaacataaaattgtataaaatctcgcaaaata 45045398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 49170038 - 49169981
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| ||||| |||||  ||||||||||||||||||||||||| |||  |||||||    
T  49170038 aatttggatcaatcgaaacctaaaaccgacataaaattgtataaagtcttgcaaaata 49169981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 164
Target Start/End: Original strand, 49657238 - 49657358
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcattaatttt-taatttttctgagtgaaccgt 142  Q
    |||||| ||||||| |||  |||||||||| |||||||| ||||||| ||| |||||| || | || || || ||||| ||||||||| | |||  ||||    
T  49657238 aatttggatcaaccaaaacataaaaccgacgtaaaattgcataaaatttcaaaaaatagacctatagtcgttgattttttaatttttccgggtgggccgt 49657337  T
Q  143 gacccaccatagcccatgaagg 164  Q
    ||||||||  ||||||||||||    
T  49657338 gacccacc-cagcccatgaagg 49657358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 52571324 - 52571380
Alignment:
Q  22 gaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaa 78  Q
    |||||||| |||| |||  | ||||||| |||||||||||| |||||||||||||||    
T  52571324 gaccactacaccaatttgcggaaatttggatcaaccgaaatctaaaaccgacataaa 52571380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 5e-22; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 44 - 172
Target Start/End: Complemental strand, 26873835 - 26873706
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcatt-aatttttaatttttctgagtgaaccgt 142  Q
    |||||| ||||||| |||  ||||||||||| |||||||||||||||||| ||||||| || | |||||||| | ||||||||||||| | |||  ||||    
T  26873835 aatttggatcaaccaaaacataaaaccgacacaaaattgtataaaatctcgcaaaatagacctataatcattgattttttaatttttccgggtgggccgt 26873736  T
Q  143 gacccaccatagcccatgaagggctccgcc 172  Q
    | ||||||  ||||||||||||||||||||    
T  26873735 ggcccaccccagcccatgaagggctccgcc 26873706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 14 - 169
Target Start/End: Complemental strand, 41367821 - 41367666
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatca 113  Q
    |||||||||||||||| |||||||| |  ||||||| ||||||| |||| ||||| ||| | ||||||| |||||||||| |||| || || | ||||      
T  41367821 ttcggatggaccactacaccactttgtagaaatttggatcaaccaaaatataaaatcgatacaaaattgcataaaatctcgcaaattagacctataatat 41367722  T
Q  114 ttaatttttaatttttctgagtgaaccgtgacccaccatagcccatgaagggctcc 169  Q
    | | ||||||||||||| | |||||||||| ||||||  | |||||||||||||||    
T  41367721 tgattttttaatttttccgggtgaaccgtggcccaccccaacccatgaagggctcc 41367666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 168
Target Start/End: Complemental strand, 8461861 - 8461706
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatca 113  Q
    ||||| |||||||||| |||| |||  |  |||||| |||||||||||  |||||| |||||||||||||||||||| || ||||||| || | |||||     
T  8461861 ttcgggtggaccactacaccaatttgcgggaatttggatcaaccgaaacctaaaacagacataaaattgtataaaatatcgcaaaatagacctataatcg 8461762  T
Q  114 ttaa-tttttaatttttctgagtgaaccgtgacccaccatagcccatgaagggctc 168  Q
    |||| |||||||||||||   |||   |||||||||||  ||||||||||||||||    
T  8461761 ttaattttttaatttttccaggtgggtcgtgacccaccccagcccatgaagggctc 8461706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 36675370 - 36675457
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    ||||| ||| |||||| |||| ||| ||  |||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  36675370 ttcgggtgggccactacaccaatttgtgggaatttggatcaaccgaaacttaaaaccgacataaaattgtataaaatctcgcaaaata 36675457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 44723946 - 44724033
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    ||||||||| |||||| |||| ||| ||  |||||| |||||||||||  |||||||||||||||||||||||||||||| |||||||    
T  44723946 ttcggatgggccactacaccaatttgtgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaata 44724033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 172
Target Start/End: Complemental strand, 45350213 - 45350055
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatca 113  Q
    ||||||||| ||| || ||||||||    ||||||| ||||||| |||  ||||||||||| ||||||| |||||||||| ||||||| || | |||||     
T  45350213 ttcggatgggccattacaccactttgcagaaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacttataatcg 45350114  T
Q  114 tt-aatttttaatttttctgagtgaaccgtgacccaccatagcccatgaagggctccgcc 172  Q
    || | ||||||||||||| | ||| |||||| ||||||  ||||||||||||||||||||    
T  45350113 ttgattttttaatttttccgggtggaccgtggcccacc-cagcccatgaagggctccgcc 45350055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 172
Target Start/End: Complemental strand, 46027842 - 46027683
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatca 113  Q
    ||||| ||| |||||| ||||||||   | |||||| ||||||| |||  ||||||||||| ||||||| |||||||||| ||||||| || | |||||     
T  46027842 ttcgggtgggccactacaccactttgcaagaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacctataatcg 46027743  T
Q  114 tt-aatttttaatttttctgagtgaaccgtgacccaccatagcccatgaagggctccgcc 172  Q
    || | ||||||||||||| | ||| |||||| ||||||  |||||| |||||||||||||    
T  46027742 ttgattttttaatttttccgggtggaccgtggcccaccccagcccacgaagggctccgcc 46027683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 29075098 - 29075155
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  29075098 aatttggatcaaccgaaacttaaaaccgacataaaattgtataaaatctcgcaaaata 29075155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 44 - 172
Target Start/End: Original strand, 36675513 - 36675642
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcattaa-tttttaatttttctgagtgaaccgt 142  Q
    |||||| ||||||| |||  ||||||||||| ||||||| |||||||||||||||||| |  | |||||||||| ||||||||||||  |  ||  ||||    
T  36675513 aatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcacaaaatagatctataatcattaattttttaattttttcggatgggccgt 36675612  T
Q  143 gacccaccatagcccatgaagggctccgcc 172  Q
    | ||||||  ||||||||||||||||||||    
T  36675613 ggcccaccccagcccatgaagggctccgcc 36675642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 39976596 - 39976509
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    ||||| |||||||||| |||| ||||   ||||||| |||||  ||||| ||||||||||||||| ||||||||||||||||||||||    
T  39976596 ttcgggtggaccactacaccaatttacagaaatttggatcaattgaaatctaaaaccgacataaatttgtataaaatctcacaaaata 39976509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 43859366 - 43859279
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    ||||| |||||||||| |||| |||    ||||||| |||||||||||  |||||||||| |||||||||||||||||||||||||||    
T  43859366 ttcgggtggaccactacaccaatttgcagaaatttggatcaaccgaaacctaaaaccgacgtaaaattgtataaaatctcacaaaata 43859279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 101
Target Start/End: Original strand, 22723696 - 22723746
Alignment:
Q  51 atcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  22723696 atcaaccgaaatctaaaaccgacataaaattgtataaaatctcgcaaaata 22723746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 172
Target Start/End: Original strand, 44724096 - 44724218
Alignment:
Q  51 atcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcatt-aatttttaatttttctgagtgaaccgtgacccac 149  Q
    ||||||| |||  ||||||||||| |||||||||||||||||| |||||||||| | ||||  ||   ||||||||||||| | |||  ||||| |||||    
T  44724096 atcaaccaaaacataaaaccgacacaaaattgtataaaatctctcaaaataaacctataatagttggttttttaatttttccgggtgggccgtggcccac 44724195  T
Q  150 catagcccatgaagggctccgcc 172  Q
    |  ||||||||||||||||||||    
T  44724196 cccagcccatgaagggctccgcc 44724218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 31065536 - 31065593
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||  |||||||||||||||||||||||||||||| |||||||    
T  31065536 aatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaata 31065593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 42241842 - 42241891
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctc 93  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  42241842 aatttggatcaaccgaaatctaaaaccgacataaaattgtataaaatctc 42241891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 45350296 - 45350239
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    ||||||||||||||||||  ||||| |||||||||||||||||||||||| |||||||    
T  45350296 aatttgaatcaaccgaaacctaaaatcgacataaaattgtataaaatctcgcaaaata 45350239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 36358193 - 36358280
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    ||||| |||||||||| |||| |||  |  |||||| |||||||||||  ||||| |||||||||||||||||||||||| |||||||    
T  36358193 ttcgggtggaccactacaccaatttgcgggaatttggatcaaccgaaacctaaaatcgacataaaattgtataaaatctcgcaaaata 36358280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 172
Target Start/End: Complemental strand, 43859253 - 43859094
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatca 113  Q
    |||||||||||||||| ||||||||     |||||| ||||||| |||  ||||||||| | ||||||| |||||||||| |||| |  || | |||||     
T  43859253 ttcggatggaccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatctcgcaaattcgacctataatcg 43859154  T
Q  114 tt-aatttttaatttttctgagtgaaccgtgacccaccatagcccatgaagggctccgcc 172  Q
    || | |||||||||||||   |||  ||||| |||||| |||||||||||||||||||||    
T  43859153 ttgattttttaatttttccaggtgggccgtggcccaccctagcccatgaagggctccgcc 43859094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 64 - 122
Target Start/End: Complemental strand, 6961159 - 6961101
Alignment:
Q  64 taaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcattaattttt 122  Q
    ||||||||||| |||||||||||||||||  |||||||||||| |||||||||| ||||    
T  6961159 taaaaccgacacaaaattgtataaaatcttgcaaaataaacatataatcattaaatttt 6961101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 51 - 101
Target Start/End: Complemental strand, 17167105 - 17167055
Alignment:
Q  51 atcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||||||||  |||||||||||||||||||||||||||||| |||||||    
T  17167105 atcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaata 17167055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 14 - 100
Target Start/End: Complemental strand, 25174309 - 25174223
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaat 100  Q
    ||||| |||||||||| |||||||| ||| |||||| |||||||||||  ||||||| ||| | |||| ||||||||||| ||||||    
T  25174309 ttcgggtggaccactacaccactttgtgagaatttggatcaaccgaaacctaaaaccaacacataattatataaaatctcgcaaaat 25174223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 172
Target Start/End: Complemental strand, 17166998 - 17166869
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcattaattttt-aatttttctgagtgaaccgt 142  Q
    |||||| ||||||| |||  ||||||||| | ||||||| |||||||||| ||||||| |  | ||||  || |||||| |||||||||| |||  ||||    
T  17166998 aatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatctcgcaaaatagaactataattgttgattttttaatttttctgggtgggccgt 17166899  T
Q  143 gacccaccatagcccatgaagggctccgcc 172  Q
    | ||||||  ||||||||||||||||||||    
T  17166898 ggcccaccccagcccatgaagggctccgcc 17166869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 22566606 - 22566663
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||| |||||| |||||||||||| |||||||||||||||||| |||||||    
T  22566606 aatttggatcagccgaaacttaaaaccgacacaaaattgtataaaatctcgcaaaata 22566663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 31931937 - 31931994
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||  ||||||||||||||||| |||||||||||| |||||||    
T  31931937 aatttggatcaaccgaaacctaaaaccgacataaaatcgtataaaatctcgcaaaata 31931994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 40055836 - 40055779
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||  |||||| ||||||||||||||||||||||| |||||||    
T  40055836 aatttggatcaaccgaaacctaaaactgacataaaattgtataaaatctcgcaaaata 40055779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 44143006 - 44142949
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| ||||| | |||| |||||||||||||||||||||||||||||| |||||||    
T  44143006 aatttggatcaatcaaaatctaaaaccgacataaaattgtataaaatctcgcaaaata 44142949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 46027925 - 46027868
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| ||||||| |||| |||||| ||||||||||||||||||||||| |||||||    
T  46027925 aatttggatcaacctaaatctaaaactgacataaaattgtataaaatctcgcaaaata 46027868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 101
Target Start/End: Original strand, 46828838 - 46828919
Alignment:
Q  20 tggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||||||| ||||||||  |  |||||| |||||||||||  ||| ||||||||||||||||| |||||||| |||||||    
T  46828838 tggaccactacaccactttgcgggaatttggatcaaccgaaacctaataccgacataaaattgtacaaaatctcgcaaaata 46828919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 172
Target Start/End: Original strand, 16834273 - 16834432
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatca 113  Q
    ||||||||| |||||| ||||||||    ||||||| ||||||| |||  |||||| |||| ||||||| ||||||| | ||||||||||| | |||||     
T  16834273 ttcggatgggccactacaccactttgcagaaatttggatcaaccaaaacataaaactgacacaaaattgcataaaattttacaaaataaacctataatcg 16834372  T
Q  114 ttaattttta-atttttctgagtgaaccgtgacccaccatagcccatgaagggctccgcc 172  Q
    || ||||||  ||||||| |  ||  || || ||||||  ||||||||||||||||||||    
T  16834373 ttgatttttttatttttccggatgggccatggcccaccccagcccatgaagggctccgcc 16834432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 41367934 - 41367847
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    ||||| |||| ||||| |||| |||  | ||||||| ||||||  |||  ||||||||||||||| ||||||||||||||||||||||    
T  41367934 ttcgggtggatcactacaccaatttgcggaaatttggatcaactaaaacctaaaaccgacataaatttgtataaaatctcacaaaata 41367847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 101
Target Start/End: Original strand, 23469316 - 23469366
Alignment:
Q  51 atcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| ||||  |||||||||||||||||||||||||||||| |||||||    
T  23469316 atcaacagaaacctaaaaccgacataaaattgtataaaatctcgcaaaata 23469366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 122
Target Start/End: Original strand, 42241955 - 42242033
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcattaattttt 122  Q
    |||||| ||||||| |||  ||||||||||| ||||||| ||||||||||||||| ||||| | ||||| || ||||||    
T  42241955 aatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcacaaattaaacctataatcgttgattttt 42242033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 9624241 - 9624192
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctc 93  Q
    |||||| ||||||| |||  ||||||||||||||||||||||||||||||    
T  9624241 aatttggatcaaccaaaacctaaaaccgacataaaattgtataaaatctc 9624192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 16834188 - 16834237
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctc 93  Q
    |||||| ||||| |||||  ||||||||||||||||||||||||||||||    
T  16834188 aatttggatcaatcgaaacctaaaaccgacataaaattgtataaaatctc 16834237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 23469422 - 23469479
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| ||||||| |||| ||||||||||| ||||||| |||||||||| |||||||    
T  23469422 aatttggatcaaccaaaatataaaaccgacacaaaattgcataaaatctcgcaaaata 23469479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 172
Target Start/End: Original strand, 36358336 - 36358465
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcattaatttt-taatttttctgagtgaaccgt 142  Q
    |||||| ||||||| |||  ||||||||| | ||||||| ||||||| || ||||||| |  | ||||| || ||||| |||||||||   ||| |||||    
T  36358336 aatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatgtcgcaaaatagatctataatcgttgattttttaatttttccaggtggaccgt 36358435  T
Q  143 gacccaccatagcccatgaagggctccgcc 172  Q
    | ||||||  ||||||||||||||||||||    
T  36358436 ggcccaccccagcccatgaagggctccgcc 36358465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 98
Target Start/End: Complemental strand, 26873978 - 26873894
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaa 98  Q
    ||||| |||||||||| |||| |||  |  |||||| ||||| |||||| |||||| ||||||||||||||||||| ||| ||||    
T  26873978 ttcgggtggaccactacaccaatttgcgggaatttggatcaatcgaaatctaaaactgacataaaattgtataaaacctcgcaaa 26873894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 122
Target Start/End: Complemental strand, 28754940 - 28754860
Alignment:
Q  42 aaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcattaattttt 122  Q
    |||||||| |||||| ||||  |||||  ||||||||||||||||||||||| |||| || |||| | ||| |||||||||    
T  28754940 aaaatttggatcaactgaaacctaaaattgacataaaattgtataaaatctcgcaaagtagacatatgatcgttaattttt 28754860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 31429012 - 31428925
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    ||||| |||||||||| |||| |||| |  ||||   |||||| ||||  |||||||||||||||||| ||||||||||| |||||||    
T  31429012 ttcgggtggaccactacaccaatttacgggaattgagatcaactgaaacctaaaaccgacataaaattttataaaatctcgcaaaata 31428925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 80
Target Start/End: Complemental strand, 29663076 - 29663010
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaat 80  Q
    ||||| ||| |||||| |||||||| ||| |||||| |||| ||||||| ||||||||||| |||||    
T  29663076 ttcgggtgggccactacaccactttgtgagaatttggatcagccgaaatctaaaaccgacacaaaat 29663010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 172
Target Start/End: Original strand, 29502128 - 29502287
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatca 113  Q
    ||||||||| |||||| ||||||||  |  |||||| |||   |||||  ||||||| ||| ||||||| |||||||||  ||||||| || | | |||     
T  29502128 ttcggatgggccactacaccactttgcgggaatttggatctgtcgaaacctaaaaccaacacaaaattgaataaaatcttgcaaaatatacctattatcg 29502227  T
Q  114 ttaattttt--aatttttctgagtgaaccgtgacccaccatagcccatgaagggctccgcc 172  Q
    |||||||||  |||||||| | |||  | ||| |||||| |||||||||||||||||||||    
T  29502228 ttaattttttaaatttttcgg-gtgggctgtggcccaccctagcccatgaagggctccgcc 29502287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 101
Target Start/End: Original strand, 44467954 - 44467991
Alignment:
Q  64 taaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    ||||||| |||||||||||||||||||||| |||||||    
T  44467954 taaaaccaacataaaattgtataaaatctcgcaaaata 44467991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 172
Target Start/End: Original strand, 44468047 - 44468176
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcattaattttt-aatttttctgagtgaaccgt 142  Q
    |||||| ||||||| |||  ||||||| ||| ||||||| |||||||||| ||||||| |  | ||||| || |||||| ||||||||   |||  ||||    
T  44468047 aatttggatcaaccaaaacataaaaccaacacaaaattgcataaaatctcgcaaaatagatctataatcgttgattttttaatttttccaggtgggccgt 44468146  T
Q  143 gacccaccatagcccatgaagggctccgcc 172  Q
    | ||||||  |||| |||||||||||||||    
T  44468147 ggcccaccccagcctatgaagggctccgcc 44468176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 180
Target Start/End: Complemental strand, 8727757 - 8727717
Alignment:
Q  140 cgtgacccaccatagcccatgaagggctccgcctcttaatc 180  Q
    |||| |||||| |||||||||||||||||||||||| ||||    
T  8727757 cgtggcccaccctagcccatgaagggctccgcctctgaatc 8727717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 5e-22; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 44 - 172
Target Start/End: Complemental strand, 18491319 - 18491190
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcatt-aatttttaatttttctgagtgaaccgt 142  Q
    |||||| ||||||| |||  ||||||||||||||||||  |||||||||||||||||| || | ||||| || | ||||||||||||| |||||  ||||    
T  18491319 aatttggatcaaccaaaacataaaaccgacataaaattacataaaatctcacaaaatagacctataatcgttgattttttaatttttccgagtgggccgt 18491220  T
Q  143 gacccaccatagcccatgaagggctccgcc 172  Q
    | ||||||  ||||||||||||||||||||    
T  18491219 ggcccaccccagcccatgaagggctccgcc 18491190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 68 - 175
Target Start/End: Original strand, 9046131 - 9046239
Alignment:
Q  68 accgacataaaattgtataaaatctcacaaaataaacatttaatcattaatttt-taatttttctgagtgaaccgtgacccaccatagcccatgaagggc 166  Q
    ||||||| |||||||||||||||||| ||||||| |  | ||||| |||||||| ||||||||||||||| |  ||| |||||| ||||||||||||| |    
T  9046131 accgacacaaaattgtataaaatctcgcaaaatagatctataatcgttaattttttaatttttctgagtggattgtggcccaccctagcccatgaaggac 9046230  T
Q  167 tccgcctct 175  Q
    |||||||||    
T  9046231 tccgcctct 9046239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 98
Target Start/End: Original strand, 19653528 - 19653612
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaa 98  Q
    |||||||||||||||| |||| ||| ||  |||||| |||||||||||  ||||| |||||||||||||||||||||||||||||    
T  19653528 ttcggatggaccactacaccaatttgtgggaatttggatcaaccgaaacctaaaatcgacataaaattgtataaaatctcacaaa 19653612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 172
Target Start/End: Complemental strand, 13857774 - 13857616
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatca 113  Q
    ||||| ||| |||||| |||||||||   ||||||| |||| |||||| |||||||| ||| |||||||||||||||||||||||||| || | |  ||     
T  13857774 ttcgggtgggccactacaccactttacagaaatttggatcagccgaaacttaaaaccaacacaaaattgtataaaatctcacaaaatacacctat-gtct 13857676  T
Q  114 ttaa-tttttaatttttctgagtgaaccgtgacccaccatagcccatgaagggctccgcc 172  Q
    |||| ||||| |||||||  ||||  ||||| |||||| |||||||||||||||| ||||    
T  13857675 ttaattttttgatttttccaagtgggccgtggcccaccctagcccatgaagggcttcgcc 13857616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 16925381 - 16925294
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    ||||| |||||||||| |||| |||  | ||||||| |||||||||||  ||||||||||||||| ||||||||||||||||||||||    
T  16925381 ttcgggtggaccactacaccaatttgcggaaatttggatcaaccgaaacctaaaaccgacataaatttgtataaaatctcacaaaata 16925294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 21 - 111
Target Start/End: Complemental strand, 52581724 - 52581634
Alignment:
Q  21 ggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaat 111  Q
    ||||||||| |||| ||| || ||||||| ||| |||||||  ||||||||||||||||||||||||||||||  ||||||||||| ||||    
T  52581724 ggaccactacaccaatttgtggaaatttggatctaccgaaacctaaaaccgacataaaattgtataaaatctcgtaaaataaacatataat 52581634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 38141470 - 38141527
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  38141470 aatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcacaaaata 38141527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 64 - 172
Target Start/End: Complemental strand, 27270465 - 27270357
Alignment:
Q  64 taaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcattaatttttaatttttctgagtgaaccgtgacccaccatagcccatgaag 163  Q
    ||||||||||| |||||||||||||||||| ||||||| || | |||||||| |||||| | ||||| | |||  | ||| ||||||  |||||||||||    
T  27270465 taaaaccgacacaaaattgtataaaatctcgcaaaatagacttataatcattgattttttaattttccgggtgggctgtggcccaccccagcccatgaag 27270366  T
Q  164 ggctccgcc 172  Q
    |||||||||    
T  27270365 ggctccgcc 27270357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 2654793 - 2654880
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    ||||| |||||||||| |||| |||  | ||||| | |||||||||||| |||||||||| |||||||||||||||||||| ||||||    
T  2654793 ttcgggtggaccactacaccaatttgcggaaattgggatcaaccgaaatctaaaaccgacgtaaaattgtataaaatctcataaaata 2654880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 172
Target Start/End: Original strand, 11650962 - 11651121
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatca 113  Q
    ||||| |||||||||| ||||||||     |||||| ||||||| |||  ||||||||||| ||||||| |||||||||| ||||||| || | |||||     
T  11650962 ttcgggtggaccactacaccactttgcatgaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacctataatcg 11651061  T
Q  114 tt-aatttttaatttttctgagtgaaccgtgacccaccatagcccatgaagggctccgcc 172  Q
    || | ||||||||||||| | | |  ||||| ||||||  ||||||||||||||||||||    
T  11651062 ttgattttttaatttttccgggcgggccgtggcccaccccagcccatgaagggctccgcc 11651121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 130
Target Start/End: Original strand, 10096463 - 10096569
Alignment:
Q  25 cactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcatt-aattttta 123  Q
    ||||| ||||||||  | ||||||| ||||||||||| |||||||||||| |||||| ||||||||||| |||||| ||| | ||||| || | ||||||    
T  10096463 cactacaccactttgcggaaatttggatcaaccgaaacttaaaaccgacacaaaattatataaaatctcgcaaaatgaacctataatcgttgatttttta 10096562  T
Q  124 atttttc 130  Q
    |||||||    
T  10096563 atttttc 10096569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 10096369 - 10096426
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| ||||| ||||| ||||||||||||||||||||||||||||||| |||||||    
T  10096369 aatttggatcaatcgaaacttaaaaccgacataaaattgtataaaatctcgcaaaata 10096426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 13233475 - 13233418
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||  |||||||||||||||||||||||||||||| |||||||    
T  13233475 aatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaata 13233418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 18491432 - 18491375
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||  |||||||||||||||||||||||||||||| |||||||    
T  18491432 aatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaata 18491375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 44 - 172
Target Start/End: Original strand, 19653670 - 19653799
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcatt-aatttttaatttttctgagtgaaccgt 142  Q
    |||||| ||||||| |||  ||||||||||| ||||||| ||||||||| |||||||| || | ||||| || | ||||| ||||||| | |||  ||||    
T  19653670 aatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctaacaaaatagacctataatcgttgatttttttatttttcggtgtgggccgt 19653769  T
Q  143 gacccaccatagcccatgaagggctccgcc 172  Q
    | ||||||  ||||||||||||||||||||    
T  19653770 ggcccaccccagcccatgaagggctccgcc 19653799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 43564663 - 43564606
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||  |||||||||||||||||||||||||||||| |||||||    
T  43564663 aatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaata 43564606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 76 - 172
Target Start/End: Complemental strand, 44134594 - 44134497
Alignment:
Q  76 aaaattgtataaaatctcacaaaataaacatttaatcattaattttt-aatttttctgagtgaaccgtgacccaccatagcccatgaagggctccgcc 172  Q
    ||||||| |||||||||||||||||| || | ||||| || |||||| |||||||| | ||| |||||| ||||||  ||||||||||||||||||||    
T  44134594 aaaattgcataaaatctcacaaaatagacctataatcgttgattttttaatttttccgggtggaccgtggcccaccccagcccatgaagggctccgcc 44134497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 44745503 - 44745560
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||  |||||||||||||||||||||||||||||| |||||||    
T  44745503 aatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaata 44745560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 172
Target Start/End: Complemental strand, 36584555 - 36584427
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcattaatttttaatttttctgagtgaaccgtg 143  Q
    |||||| ||||||| |||  ||||||  ||| ||||||| |||||||||| ||||||| || | |||| ||| |||||| ||||||| | |||  |||||    
T  36584555 aatttggatcaaccaaaacataaaactaacacaaaattgcataaaatctcgcaaaatatacctataattattgattttttatttttccgggtgggccgtg 36584456  T
Q  144 acccaccatagcccatgaagggctccgcc 172  Q
     ||||||  ||||||||||||||||||||    
T  36584455 gcccaccccagcccatgaagggctccgcc 36584427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 10393985 - 10393898
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    ||||| ||| |||||| |||||||| || ||||||||||||  |||||  ||||||||||| |||||| ||||||||||| |||||||    
T  10393985 ttcgggtgggccactacaccactttgtggaaatttgaatcagacgaaacctaaaaccgacacaaaattatataaaatctcgcaaaata 10393898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 12700451 - 12700538
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||||| ||||||| |||| |||  |  |||||| |||||||||||  ||||| |||||||||||||||||||||||| |||||||    
T  12700451 ttcggatgaaccactacaccaatttgcgggaatttggatcaaccgaaacctaaaatcgacataaaattgtataaaatctcgcaaaata 12700538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 93
Target Start/End: Complemental strand, 27270628 - 27270549
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctc 93  Q
    ||||| ||||| |||| ||||||||  |  ||||||||||||||||||  |||||||||||||||| |||||||||||||    
T  27270628 ttcgggtggactactacaccactttgcgggaatttgaatcaaccgaaacctaaaaccgacataaaaatgtataaaatctc 27270549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 64 - 172
Target Start/End: Original strand, 40228476 - 40228586
Alignment:
Q  64 taaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcattaattttt--aatttttctgagtgaaccgtgacccaccatagcccatga 161  Q
    ||||||||||| ||||||| |||||||||| ||||||| || | ||||| || ||||||  |||||||| | |||  ||||| ||||||  |||||||||    
T  40228476 taaaaccgacacaaaattgcataaaatctcgcaaaatagacctataatcgttgattttttaaatttttccgggtgggccgtggcccaccccagcccatga 40228575  T
Q  162 agggctccgcc 172  Q
    |||||||||||    
T  40228576 agggctccgcc 40228586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 41832652 - 41832565
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    ||||| ||| |||||| |||| |||  || |||| | |||||||||||  |||||||||||||||||||||||||||||| |||||||    
T  41832652 ttcgggtgggccactacaccaatttgcgagaattgggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaata 41832565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 130
Target Start/End: Complemental strand, 50767186 - 50767079
Alignment:
Q  24 ccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcatt-aattttt 122  Q
    |||||| ||||||||  | ||||||| ||||| | |||  |||||||||||||||||||||||||||||| ||||||| || | ||||| || | |||||    
T  50767186 ccactacaccactttgcggaaatttggatcaatcaaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataatcgttgatttttt 50767087  T
Q  123 aatttttc 130  Q
    ||||||||    
T  50767086 aatttttc 50767079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 93
Target Start/End: Original strand, 54795612 - 54795691
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctc 93  Q
    ||||| ||||| |||| ||||||||  |  ||||||||||||||||||  |||||||||||||||| |||||||||||||    
T  54795612 ttcgggtggactactacaccactttgcgggaatttgaatcaaccgaaacctaaaaccgacataaaaatgtataaaatctc 54795691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 44 - 122
Target Start/End: Complemental strand, 41832508 - 41832430
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcattaattttt 122  Q
    |||||| ||||||| |||  ||||||||||||||||||| |||||||||  ||||||| |||| ||||| |||||||||    
T  41832508 aatttggatcaaccaaaacataaaaccgacataaaattgcataaaatcttgcaaaatagacatataatcgttaattttt 41832430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 6756074 - 6756017
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||  ||||||||||||||||| |||||||||||| |||||||    
T  6756074 aatttggatcaaccgaaacataaaaccgacataaaatagtataaaatctcgcaaaata 6756017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 22647356 - 22647299
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    ||||||||||||||||||  ||||||  |||||||||||||||||||||| |||||||    
T  22647356 aatttgaatcaaccgaaacctaaaacaaacataaaattgtataaaatctcgcaaaata 22647299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 99
Target Start/End: Original strand, 26653132 - 26653217
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaa 99  Q
    |||||||| ||||| | ||||||||||  ||||||| || | || |||||||||||||||| ||| |||||||||||||| |||||    
T  26653132 ttcggatgaaccaccacaccactttatagaaatttggattagccaaaatttaaaaccgacacaaagttgtataaaatctcgcaaaa 26653217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 31581663 - 31581720
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||  ||||| |||||||||||||||||||||||| |||||||    
T  31581663 aatttggatcaaccgaaacctaaaatcgacataaaattgtataaaatctcgcaaaata 31581720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 172
Target Start/End: Original strand, 31581776 - 31581905
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcattaatttt-taatttttctgagtgaaccgt 142  Q
    |||||| ||||||| |||  ||||||||||| ||||||| |||||||||  ||||||| || | ||||| ||  |||| ||||||||| | ||| |||||    
T  31581776 aatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctagcaaaatagacctataatcgttgtttttttaatttttcggggtggaccgt 31581875  T
Q  143 gacccaccatagcccatgaagggctccgcc 172  Q
    | ||||||  ||||||||||||||| ||||    
T  31581876 ggcccaccccagcccatgaagggcttcgcc 31581905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 36584668 - 36584611
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| ||||||  ||| ||||||||||||||||||||||||||||||| |||||||    
T  36584668 aatttggatcaactaaaacttaaaaccgacataaaattgtataaaatctcgcaaaata 36584611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 44134738 - 44134681
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| ||||||| |||  |||||||||||||||||||||||||||||| |||||||    
T  44134738 aatttggatcaaccaaaacctaaaaccgacataaaattgtataaaatctcgcaaaata 44134681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 44817463 - 44817512
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctc 93  Q
    |||||| ||||| |||||| ||||||||||||||||||||||||||||||    
T  44817463 aatttggatcaatcgaaatctaaaaccgacataaaattgtataaaatctc 44817512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 50767279 - 50767230
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctc 93  Q
    ||||||||||||||||||  |||||||||||||||| |||||||||||||    
T  50767279 aatttgaatcaaccgaaacctaaaaccgacataaaaatgtataaaatctc 50767230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 44 - 104
Target Start/End: Original strand, 11650879 - 11650939
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaac 104  Q
    |||||| ||||||| |||  ||||| |||||||||||||||||||||||| ||||||||||    
T  11650879 aatttggatcaaccaaaacctaaaatcgacataaaattgtataaaatctcccaaaataaac 11650939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 45 - 101
Target Start/End: Original strand, 36954924 - 36954980
Alignment:
Q  45 atttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    ||||| |||||||||||  ||||| |||||||||||||||||||||||| |||||||    
T  36954924 atttggatcaaccgaaacgtaaaatcgacataaaattgtataaaatctcgcaaaata 36954980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 17 - 172
Target Start/End: Original strand, 44817548 - 44817704
Alignment:
Q  17 ggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcatt- 115  Q
    |||||| |||||| ||||||||    ||||||| ||||||| |||  ||||||||||| ||||||| ||||||| ||  |||||| || | || || ||     
T  44817548 ggatgggccactataccactttgcagaaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatttcgaaaaatagacctatagtcgttg 44817647  T
Q  116 aatttttaatttttctgagtgaaccgtgacccaccatagcccatgaagggctccgcc 172  Q
    | ||||||||||||| | |||  ||||| ||||||  ||||||||||||||||||||    
T  44817648 attttttaatttttccgggtgggccgtggcccaccccagcccatgaagggctccgcc 44817704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 172
Target Start/End: Complemental strand, 16925268 - 16925110
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatca 113  Q
    ||||| |||||||||| |||||||| |   |||||| ||||||| |||  ||||||||| | ||||||| ||||| |||| |||| || || | |||||     
T  16925268 ttcgggtggaccactacaccactttgtaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaagtctcgcaaattagacctataatcg 16925169  T
Q  114 ttaattttt-aatttttctgagtgaaccgtgacccaccatagcccatgaagggctccgcc 172  Q
    || |||||| |||||||| | ||| |||||| ||||||   |||||||||||||||||||    
T  16925168 ttgattttttaatttttccgggtggaccgtggcccacccc-gcccatgaagggctccgcc 16925110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 172
Target Start/End: Complemental strand, 51001601 - 51001479
Alignment:
Q  51 atcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcatt-aatttttaatttttctgagtgaaccgtgacccac 149  Q
    |||||||||||  |||||  |||||||||||||||||||| |  ||||||| || | ||| | || | ||||||||||||| | |||  ||||| |||||    
T  51001601 atcaaccgaaacctaaaaaagacataaaattgtataaaatattgcaaaatagacttataaacgttgattttttaatttttccgggtgggccgtggcccac 51001502  T
Q  150 catagcccatgaagggctccgcc 172  Q
    |  ||||||||||||||||||||    
T  51001501 cccagcccatgaagggctccgcc 51001479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 4632731 - 4632788
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||| ||||||  ||| |||||||||||||||||| |||||||    
T  4632731 aatttggatcaaccgaaatctaaaactaacacaaaattgtataaaatctcgcaaaata 4632788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 76 - 172
Target Start/End: Complemental strand, 6755929 - 6755832
Alignment:
Q  76 aaaattgtataaaatctcacaaaataaacatttaatcattaattttt-aatttttctgagtgaaccgtgacccaccatagcccatgaagggctccgcc 172  Q
    ||||||| |||||||||| ||||||| || | ||||| || |||||| |||||||| | |||  ||||| ||||||  ||||||||||||||||||||    
T  6755929 aaaattgcataaaatctcgcaaaatagacctataatcgttgattttttaatttttccgggtgggccgtggcccaccccagcccatgaagggctccgcc 6755832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 13613005 - 13613054
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctc 93  Q
    |||||| ||||||| |||  ||||||||||||||||||||||||||||||    
T  13613005 aatttggatcaaccaaaacctaaaaccgacataaaattgtataaaatctc 13613054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 31664080 - 31664137
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||  |||||||||||||||||| ||||||||||  |||||||    
T  31664080 aatttggatcaaccgaaacctaaaaccgacataaaattttataaaatcttgcaaaata 31664137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 172
Target Start/End: Original strand, 44745616 - 44745745
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcatt-aatttttaatttttctgagtgaaccgt 142  Q
    |||||| ||||||| |||  ||||||||||| ||||||| |||||||||  ||||||| || | ||||| || | |||||||||||||||  ||  ||||    
T  44745616 aatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatcttgcaaaatagacctataatcgttgattttttaatttttctggatgggccgt 44745715  T
Q  143 gacccaccatagcccatgaagggctccgcc 172  Q
    | ||||||  ||||||| || |||||||||    
T  44745716 ggcccaccccagcccattaaaggctccgcc 44745745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 45670122 - 45670005
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatca 113  Q
    ||||| ||| |||||| |||||||| |   |||||| ||||||| |||  ||||||||||| ||||||  |||||||||| |||||||||| | |||||     
T  45670122 ttcgggtgggccactacaccactttgtaggaatttggatcaaccaaaacataaaaccgacacaaaattacataaaatctcgcaaaataaacctataatcg 45670023  T
Q  114 tt-aatttttaatttttc 130  Q
    || | |||||||||||||    
T  45670022 ttgattttttaatttttc 45670005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 101
Target Start/End: Complemental strand, 13869275 - 13869217
Alignment:
Q  43 aaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    ||||||| |||| ||||||  ||||||||||| |||||  |||||||||||||||||||    
T  13869275 aaatttggatcagccgaaacctaaaaccgacacaaaatgatataaaatctcacaaaata 13869217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 122
Target Start/End: Original strand, 54795755 - 54795833
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcattaattttt 122  Q
    |||||| ||||| | |||| ||||||||||| |||||||||||||||||  ||||||| || | ||||| || ||||||    
T  54795755 aatttggatcaatcaaaatctaaaaccgacacaaaattgtataaaatcttgcaaaatagacctataatcgttgattttt 54795833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 165
Target Start/End: Original strand, 11975782 - 11975871
Alignment:
Q  76 aaaattgtataaaatctcacaaaataaacatttaatcattaatttttaatttttctgagtgaaccgtgacccaccatagcccatgaaggg 165  Q
    |||||||| ||||||||| || |||| || | ||||  ||||||||||||||||||| |||   |||||||||||  ||| |||||||||    
T  11975782 aaaattgtttaaaatctcgcagaatagacctataattgttaatttttaatttttctgggtgggtcgtgacccaccccagctcatgaaggg 11975871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 40228343 - 40228392
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctc 93  Q
    |||||| |||||||||||  |||||| |||||||||| ||||||||||||    
T  40228343 aatttggatcaaccgaaacctaaaactgacataaaatcgtataaaatctc 40228392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 169
Target Start/End: Complemental strand, 18669027 - 18668935
Alignment:
Q  78 aattgtataaaatctcacaaaataaacatttaatcattaa-tttttaatttttctgagtgaaccgtgacccaccatagcccatgaagggctcc 169  Q
    |||||||||||||||| |||| || || | ||||| |||| |||||||||||||   |||  |||||| | ||| ||||||||||||||||||    
T  18669027 aattgtataaaatctcgcaaagtagacctataatcgttaattttttaatttttccaggtgggccgtgatcaaccctagcccatgaagggctcc 18668935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 5e-22; HSPs: 64)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 14 - 111
Target Start/End: Complemental strand, 23177617 - 23177520
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaat 111  Q
    |||||||||||||||| |||| |||  |  |||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||| |||| ||||    
T  23177617 ttcggatggaccactacaccaatttgcgggaatttggatcaaccgaaatctaaaaccgacataaaattgtataaaatctcgcaaaatagacatataat 23177520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 14 - 172
Target Start/End: Complemental strand, 6849915 - 6849756
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatca 113  Q
    ||||| ||| |||||| |||||||| |  ||||||||||||||| |||  ||||||||| | |||||||||||||||||| |||| || || | |||||     
T  6849915 ttcgggtgggccactacaccactttgtagaaatttgaatcaaccaaaacataaaaccgatacaaaattgtataaaatctcgcaaattagacctataatcg 6849816  T
Q  114 tt-aatttttaatttttctgagtgaaccgtgacccaccatagcccatgaagggctccgcc 172  Q
    || | ||||||||||||| | |||  ||||| ||||||  ||||||||||||||||||||    
T  6849815 ttgattttttaatttttccgggtgggccgtggcccaccccagcccatgaagggctccgcc 6849756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 44 - 172
Target Start/End: Original strand, 33012082 - 33012211
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcatt-aatttttaatttttctgagtgaaccgt 142  Q
    |||||| ||||||| |||  ||||||||||| ||||||| |||||||||||||||||| || | ||||| || | ||||||||||||| | |||  ||||    
T  33012082 aatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcacaaaatagacctataatcgttgattttttaatttttccgggtgggccgt 33012181  T
Q  143 gacccaccatagcccatgaagggctccgcc 172  Q
    | ||||||  ||||||||||||||||||||    
T  33012182 ggcccaccccagcccatgaagggctccgcc 33012211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 165
Target Start/End: Complemental strand, 21852163 - 21852011
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatca 113  Q
    ||||||||| |||||| |||||||||  |||||||| ||||| |||||| |||||| |||| |||||||||||||||||| |||| || || | | |||     
T  21852163 ttcggatgggccactacaccactttacaaaaatttggatcaatcgaaatctaaaacggacacaaaattgtataaaatctcgcaaagtatacctatcatcg 21852064  T
Q  114 ttaattttt-aatttttctgagtgaaccgtgacccaccatagcccatgaaggg 165  Q
    ||||||||| |||||||  | ||  |||||| |||||| ||| ||||||||||    
T  21852063 ttaatttttaaattttttcgggtagaccgtggcccaccctagtccatgaaggg 21852011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 29981589 - 29981676
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    ||||| |||||||||| |||| |||  |  |||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  29981589 ttcgggtggaccactataccaatttgcgggaatttggatcaaccgaaacttaaaaccgacataaaattgtataaaatctcgcaaaata 29981676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 172
Target Start/End: Complemental strand, 42372132 - 42371973
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatca 113  Q
    ||||| |||||||||| ||||||||     |||||  ||||||| |||  ||||||||||| ||||||| |||||||||||||||||| || | ||||||    
T  42372132 ttcgggtggaccactacaccactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcacaaaatagacctataatca 42372033  T
Q  114 tt-aatttttaatttttctgagtgaaccgtgacccaccatagcccatgaagggctccgcc 172  Q
    || | ||||||||||||||| |||  ||||| ||||||  |  |||||||||||||||||    
T  42372032 ttgattttttaatttttctgggtgggccgtggcccaccccaatccatgaagggctccgcc 42371973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 16692861 - 16692918
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  16692861 aatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcacaaaata 16692918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 101
Target Start/End: Original strand, 17285182 - 17285263
Alignment:
Q  20 tggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||||||| |||| |||  | ||||||| |||||||||||  |||||||||| |||||||||||||||||||||||||||    
T  17285182 tggaccactacaccaatttgcggaaatttggatcaaccgaaacctaaaaccgacgtaaaattgtataaaatctcacaaaata 17285263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 25299000 - 25299057
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  25299000 aatttggatcaaccgaaatctaaaaccgacataaaattgtataaaatctcgcaaaata 25299057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 45837089 - 45837032
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||    
T  45837089 aatttgaatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaata 45837032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 46224672 - 46224729
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  46224672 aatttggatcaaccgaaatctaaaaccgacataaaattgtataaaatctcgcaaaata 46224729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 172
Target Start/End: Original strand, 16692944 - 16693103
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatca 113  Q
    ||||| ||| |||||| |||||||| |   |||||| ||||||| |||  ||||||||||| ||||||| ||||||||||  |||||| || | |||||     
T  16692944 ttcgggtgggccactacaccactttgtaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgtaaaatagacctataatcg 16693043  T
Q  114 tt-aatttttaatttttctgagtgaaccgtgacccaccatagcccatgaagggctccgcc 172  Q
    || | ||||||||||||| | |||  ||||| ||||||  ||||||||||||||||||||    
T  16693044 ttgattttttaatttttccgggtgggccgtggcccaccccagcccatgaagggctccgcc 16693103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 44052341 - 44052428
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    ||||| ||| |||||| |||| |||  || |||||||||||||| |||  |||||||||||||||||| |||||||||||||||||||    
T  44052341 ttcgggtgggccactacaccaatttgcgagaatttgaatcaaccaaaacctaaaaccgacataaaattctataaaatctcacaaaata 44052428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 75 - 168
Target Start/End: Original strand, 17879917 - 17880011
Alignment:
Q  75 taaaattgtataaaatctcacaaaataaacatttaatcatt-aatttttaatttttctgagtgaaccgtgacccaccatagcccatgaagggctc 168  Q
    ||||||||| ||||||||| |||||||||||| |||| ||| ||||||||||||| | | |||  ||||||||||||  ||||||||||||||||    
T  17879917 taaaattgtttaaaatctcgcaaaataaacatataattattaaatttttaattttcccgggtgggccgtgacccaccccagcccatgaagggctc 17880011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 101
Target Start/End: Complemental strand, 29170188 - 29170130
Alignment:
Q  43 aaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    ||||||| |||||||||||  ||||||||||||||| ||||||||||||||||||||||    
T  29170188 aaatttggatcaaccgaaacctaaaaccgacataaatttgtataaaatctcacaaaata 29170130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 8086475 - 8086418
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||  |||||||||||||||||||||||||||||| |||||||    
T  8086475 aatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaata 8086418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 20 - 101
Target Start/End: Original strand, 9042307 - 9042388
Alignment:
Q  20 tggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||||||| |||| |||  | ||||||| |||||||||||  |||||||||| |||| ||||||||||||||||||||||    
T  9042307 tggaccactacaccaatttgcggaaatttggatcaaccgaaacctaaaaccgacttaaatttgtataaaatctcacaaaata 9042388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 44 - 172
Target Start/End: Original strand, 17285319 - 17285448
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcattaatttt-taatttttctgagtgaaccgt 142  Q
    |||||| ||||||| |||  ||||||||| ||||||||| |||||||||| |||| || || | ||||| || ||||| ||||||||| | |||  ||||    
T  17285319 aatttggatcaaccaaaacataaaaccgatataaaattgcataaaatctcgcaaattagacctataatcgttgattttttaatttttccgggtgggccgt 17285418  T
Q  143 gacccaccatagcccatgaagggctccgcc 172  Q
    | ||||||  ||||||||||||||||||||    
T  17285419 ggcccaccccagcccatgaagggctccgcc 17285448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 24542692 - 24542749
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  24542692 aatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaata 24542749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 24542806 - 24542863
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  24542806 aatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaata 24542863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 24542920 - 24542977
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  24542920 aatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaata 24542977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 24543034 - 24543091
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  24543034 aatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaata 24543091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 24543148 - 24543205
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  24543148 aatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaata 24543205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 24543262 - 24543319
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  24543262 aatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaata 24543319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 24543376 - 24543433
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  24543376 aatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaata 24543433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 24543490 - 24543547
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  24543490 aatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaata 24543547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 24543604 - 24543661
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  24543604 aatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaata 24543661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 24543718 - 24543775
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  24543718 aatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaata 24543775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 24543832 - 24543889
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  24543832 aatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaata 24543889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 24543946 - 24544003
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  24543946 aatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaata 24544003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 24544060 - 24544117
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  24544060 aatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaata 24544117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 24544174 - 24544231
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  24544174 aatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaata 24544231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 24544288 - 24544345
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  24544288 aatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaata 24544345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 24544402 - 24544459
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  24544402 aatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaata 24544459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 24544516 - 24544573
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  24544516 aatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaata 24544573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 24544630 - 24544687
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  24544630 aatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaata 24544687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 40428693 - 40428750
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||  |||||||||||||||||||||||||||||| |||||||    
T  40428693 aatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaata 40428750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 104
Target Start/End: Complemental strand, 51139931 - 51139871
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaac 104  Q
    |||||| |||||||||||  ||||||||||||||||||||| |||||||| ||||||||||    
T  51139931 aatttggatcaaccgaaacctaaaaccgacataaaattgtaaaaaatctcgcaaaataaac 51139871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 33011939 - 33012026
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    ||||||||| |||||| |||| |||  |  |||||| |||||||||||  ||||||||||||||||||| |||||||||| |||||||    
T  33011939 ttcggatgggccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgcataaaatctcgcaaaata 33012026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 47562002 - 47561915
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    ||||| |||||||||| |||| |||  |  |||||| |||||||||||  ||||||||||||||||||||||||||| || |||||||    
T  47562002 ttcgggtggaccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcgcaaaata 47561915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 43 - 101
Target Start/End: Complemental strand, 6849999 - 6849941
Alignment:
Q  43 aaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    ||||||| |||||||||||  ||||||||| ||||| ||||||||||||||||||||||    
T  6849999 aaatttggatcaaccgaaacctaaaaccgatataaatttgtataaaatctcacaaaata 6849941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 172
Target Start/End: Original strand, 29981732 - 29981861
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcatt-aatttttaatttttctgagtgaaccgt 142  Q
    |||||| || |||| ||| |||||||||||| ||||||| ||||||| ||||||| || || | ||||| || | ||||||||||||| |  ||  ||||    
T  29981732 aatttggataaaccaaaacttaaaaccgacacaaaattgcataaaatatcacaaagtagacctataatcgttgattttttaatttttccggatgggccgt 29981831  T
Q  143 gacccaccatagcccatgaagggctccgcc 172  Q
    | ||||||  ||||||||||||||||||||    
T  29981832 ggcccaccccagcccatgaagggctccgcc 29981861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 40567211 - 40567154
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| ||||||| |||  |||||||||||||||||||||||||||||| |||||||    
T  40567211 aatttggatcaaccaaaacctaaaaccgacataaaattgtataaaatctcgcaaaata 40567154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 42372215 - 42372158
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||  ||||||| |||||||||||||||||||||| |||||||    
T  42372215 aatttggatcaaccgaaacctaaaaccaacataaaattgtataaaatctcgcaaaata 42372158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 172
Target Start/End: Original strand, 44052504 - 44052613
Alignment:
Q  64 taaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcattaatttttaa-tttttctgagtgaaccgtgacccaccatagcccatgaa 162  Q
    ||||||| ||| ||||||  |||||||||| ||||||| || | ||||| || |||||||| |||||| | |||| ||||| ||||||  ||||||||||    
T  44052504 taaaaccaacacaaaattacataaaatctcgcaaaatagacctataatcgttgatttttaaatttttccgggtgagccgtggcccaccccagcccatgaa 44052603  T
Q  163 gggctccgcc 172  Q
    ||||||||||    
T  44052604 gggctccgcc 44052613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 48708329 - 48708386
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| ||||||| |||  |||||||||||||||||||||||||||||| |||||||    
T  48708329 aatttggatcaaccaaaacctaaaaccgacataaaattgtataaaatctcgcaaaata 48708386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 122
Target Start/End: Complemental strand, 51139848 - 51139740
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatca 113  Q
    ||||| ||| |||||| ||||||||   | |||||| ||||||| |||  ||||||||||| |||||||||||||||||| ||||||| || | |||||     
T  51139848 ttcgggtgggccactacaccactttgcaagaatttggatcaaccaaaacataaaaccgacacaaaattgtataaaatctcgcaaaatagacctataatcg 51139749  T
Q  114 ttaattttt 122  Q
    || ||||||    
T  51139748 ttgattttt 51139740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 130
Target Start/End: Original strand, 9246906 - 9247013
Alignment:
Q  24 ccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcattaa-ttttt 122  Q
    |||||| |||||||| ||| |||||| || | ||||||  ||||||||| | |||||||||||||||||| ||||||| |  | ||||| |||| |||||    
T  9246906 ccactacaccactttgtgagaatttggataagccgaaacctaaaaccgatacaaaattgtataaaatctcgcaaaatagatctataatccttaatttttt 9247005  T
Q  123 aatttttc 130  Q
    ||||||||    
T  9247006 aatttttc 9247013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 93
Target Start/End: Original strand, 49001477 - 49001555
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctc 93  Q
    |||||||||||||||| ||||||||| |  |||||| ||||||  |||  || |||||||||||||||||||||||||||    
T  49001477 ttcggatggaccactacaccactttacgggaatttggatcaact-aaacctagaaccgacataaaattgtataaaatctc 49001555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 128
Target Start/End: Complemental strand, 25030368 - 25030306
Alignment:
Q  67 aaccgacataaaattgtataaaatctcacaaaataaacatttaatcattaa-tttttaatttt 128  Q
    |||||||| || ||||||||||||||| ||| |||||||| |||||||||| |||||||||||    
T  25030368 aaccgacacaatattgtataaaatctcgcaagataaacatataatcattaagtttttaatttt 25030306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 101
Target Start/End: Original strand, 919642 - 919679
Alignment:
Q  64 taaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||||||||||||||||||||||||||| |||||||    
T  919642 taaaaccgacataaaattgtataaaatctcgcaaaata 919679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 172
Target Start/End: Complemental strand, 8086362 - 8086233
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcatt-aatttttaatttttctgagtgaaccgt 142  Q
    |||||| ||||||| |||  ||||||| ||||||||||| |||||||||  ||||||| |  | || || || | ||||||||||||  | ||| |||||    
T  8086362 aatttggatcaaccaaaacataaaacctacataaaattgcataaaatctagcaaaatagatctatagtcgttgattttttaattttttcgggtggaccgt 8086263  T
Q  143 gacccaccatagcccatgaagggctccgcc 172  Q
    |||||||| ||||| |||||| ||||||||    
T  8086262 gacccaccttagcctatgaagagctccgcc 8086233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 172
Target Start/End: Complemental strand, 8530195 - 8530086
Alignment:
Q  64 taaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcattaattttt-aatttttctgagtgaaccgtgacccaccatagcccatgaa 162  Q
    ||||| ||||| ||||||| |||||||||| ||||||| || | ||||| || |||||| |||||||  | |||  ||||| ||||||  ||||||||||    
T  8530195 taaaatcgacacaaaattgcataaaatctcgcaaaatagacctataatcgttgattttttaattttttcgggtgggccgtggcccaccccagcccatgaa 8530096  T
Q  163 gggctccgcc 172  Q
    ||||||||||    
T  8530095 gggctccgcc 8530086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 24790660 - 24790623
Alignment:
Q  64 taaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||||||||||||||||||||||||||| |||||||    
T  24790660 taaaaccgacataaaattgtataaaatctcgcaaaata 24790623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 172
Target Start/End: Complemental strand, 37125825 - 37125696
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcattaatttt-taatttttctgagtgaaccgt 142  Q
    |||||| ||||||| |||  |||||| |||  ||||||| ||||||| || ||||||| || | ||||| || ||||| ||||||||| | |||  ||||    
T  37125825 aatttggatcaaccaaaacgtaaaactgacgcaaaattgcataaaatatcgcaaaatagacctataatcgttgattttataatttttccgggtgggccgt 37125726  T
Q  143 gacccaccatagcccatgaagggctccgcc 172  Q
    | ||||||  ||||||||||||||||||||    
T  37125725 ggcccacctcagcccatgaagggctccgcc 37125696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 122
Target Start/End: Original strand, 32540589 - 32540697
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatca 113  Q
    ||||| ||| ||| || |||||||| || | ||||| || ||||||||  ||||||||||| ||||||||||||||||||  |||||| || | || ||     
T  32540589 ttcgggtgggccattacaccactttgtggatatttggataaaccgaaacctaaaaccgacacaaaattgtataaaatctcgtaaaatagacctatagtcg 32540688  T
Q  114 ttaattttt 122  Q
    |||||||||    
T  32540689 ttaattttt 32540697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 44 - 170
Target Start/End: Original strand, 919735 - 919862
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcattaatttttaa-tttttctgagtgaaccgt 142  Q
    |||||| ||||||| |||  ||||||| ||| ||||||| |||||||||| ||||||| |  | ||||| || |||||||| |||||| |  ||  ||||    
T  919735 aatttggatcaaccaaaacataaaaccaacacaaaattgcataaaatctcgcaaaatagatctataatcgttgatttttaaatttttccggatgggccgt 919834  T
Q  143 gacccaccatagcccatgaagggctccg 170  Q
    | ||||||  ||||||||||||||||||    
T  919835 ggcccaccccagcccatgaagggctccg 919862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 81
Target Start/End: Complemental strand, 37343149 - 37343082
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaatt 81  Q
    ||||| |||||||||| |||| |||  |  |||||| ||||||||||| |||||||||||||||||||    
T  37343149 ttcgggtggaccactacaccaatttgcgggaatttggatcaaccgaaacttaaaaccgacataaaatt 37343082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 122
Target Start/End: Original strand, 25299113 - 25299191
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcattaattttt 122  Q
    |||||| ||||||| |||  ||||||||||| ||| ||| |||||||||| ||||||| || | |||||||| ||||||    
T  25299113 aatttggatcaaccaaaacataaaaccgacacaaagttgcataaaatctcgcaaaatagacctataatcatttattttt 25299191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 101
Target Start/End: Complemental strand, 37125931 - 37125881
Alignment:
Q  51 atcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||||||||  |||||| || |||||||||||||||||||| |||||||    
T  37125931 atcaaccgaaacctaaaactgatataaaattgtataaaatctcgcaaaata 37125881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 99
Target Start/End: Complemental strand, 24790597 - 24790512
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaa 99  Q
    ||||| |||||||||| ||||||||     |||||| ||||||| |||  ||||||||||| ||||||| |||||||||| |||||    
T  24790597 ttcgggtggaccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaa 24790512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 172
Target Start/End: Complemental strand, 29170074 - 29169945
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcattaattttt-aatttttctgagtgaaccgt 142  Q
    |||||| ||||||| |||  ||||| ||| | ||||||| |||||||||| |||| || || | ||||| || |||||| |||||||| | |||  | ||    
T  29170074 aatttggatcaaccaaaacataaaatcgatacaaaattgcataaaatctcgcaaattagacctataatcgttgattttttaatttttccgggtgggctgt 29169975  T
Q  143 gacccaccatagcccatgaagggctccgcc 172  Q
    | ||||||  ||||||||||||||||||||    
T  29169974 ggcccaccccagcccatgaagggctccgcc 29169945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 40428806 - 40428863
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| ||||||| |||  ||||||||||| ||||||| |||||||||| |||||||    
T  40428806 aatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaata 40428863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 37343085 - 37343029
Alignment:
Q  116 aatttttaatttttctgagtgaaccgtgacccaccatagcccatgaagggctccgcc 172  Q
    ||||||||||||||| |||||  ||||| || |||  ||||||||||||||||||||    
T  37343085 aatttttaatttttccgagtgggccgtggccgaccccagcccatgaagggctccgcc 37343029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0978 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0978
Description:

Target: scaffold0978; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 111
Target Start/End: Complemental strand, 1379 - 1282
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaat 111  Q
    ||||| |||||||||| |||| |||  || |||||| |||||||||||  |||||||||||||||||||||||||||||| ||||||| |||| ||||    
T  1379 ttcgggtggaccactacaccaatttgcgagaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacatataat 1282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 1e-19; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 41388251 - 41388194
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  41388251 aatttgaatcaaccgaaacctaaaaccgacataaaattgtataaaatctcacaaaata 41388194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 44 - 130
Target Start/End: Original strand, 7422075 - 7422162
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcatt-aatttttaatttttc 130  Q
    |||||| |||||||||||| ||||||||||| |||||||||||||||||| |||||||||| | ||||| || | |||||||||||||    
T  7422075 aatttggatcaaccgaaatctaaaaccgacacaaaattgtataaaatctcgcaaaataaacctataatcgttgattttttaatttttc 7422162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 36060633 - 36060546
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    ||||| |||||||||| |||| |||  |  |||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  36060633 ttcgggtggaccactacaccaatttgcgggaatttggatcaaccgaaacttaaaaccgacataaaattgtataaaatctcgcaaaata 36060546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 43 - 101
Target Start/End: Complemental strand, 197336 - 197278
Alignment:
Q  43 aaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  197336 aaatttggatcaaccgaaacttaaaaccgacataaaattgtataaaatctcgcaaaata 197278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 43 - 101
Target Start/End: Complemental strand, 312173 - 312115
Alignment:
Q  43 aaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  312173 aaatttggatcaaccgaaacttaaaaccgacataaaattgtataaaatctcgcaaaata 312115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 44 - 172
Target Start/End: Original strand, 3886807 - 3886936
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcattaatttt-taatttttctgagtgaaccgt 142  Q
    |||||| ||||||| |||  ||||| ||||| ||||||| |||||||||| ||||||| || | ||||| || ||||| ||||||||| | |||||||||    
T  3886807 aatttggatcaaccaaaacataaaatcgacacaaaattgcataaaatctcgcaaaatagacctataatcgttgattttttaatttttccgggtgaaccgt 3886906  T
Q  143 gacccaccatagcccatgaagggctccgcc 172  Q
    | || |||  ||||||||||||||||||||    
T  3886907 ggcctaccccagcccatgaagggctccgcc 3886936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 44 - 172
Target Start/End: Complemental strand, 7012470 - 7012341
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcattaattttt-aatttttctgagtgaaccgt 142  Q
    |||||| ||||||| |||  ||||||||| | ||||||| |||| || || ||||||| || | |||||||| |||||| |||||||| |||||| ||||    
T  7012470 aatttggatcaaccaaaacataaaaccgatacaaaattgcataagatatcgcaaaatagacctataatcattgattttttaatttttccgagtgagccgt 7012371  T
Q  143 gacccaccatagcccatgaagggctccgcc 172  Q
    | ||||||  ||||||||||||||||||||    
T  7012370 ggcccaccccagcccatgaagggctccgcc 7012341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 28565130 - 28565073
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  28565130 aatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcacaaaata 28565073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 28572753 - 28572696
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  28572753 aatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcacaaaata 28572696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 42556007 - 42556064
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  42556007 aatttggatcaaccgaaatctaaaaccgacataaaattgtataaaatctcgcaaaata 42556064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 122
Target Start/End: Original strand, 32017972 - 32018080
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatca 113  Q
    |||| |||||||||||  ||||||| || ||||||| | |||||||||| ||||| ||||| ||||||||||||||||||  |||||| || | |||||     
T  32017972 ttcgaatggaccactacgccactttgtggaaatttggaccaaccgaaatctaaaatcgacacaaaattgtataaaatctcttaaaatagacctataatcg 32018071  T
Q  114 ttaattttt 122  Q
    |||||||||    
T  32018072 ttaattttt 32018080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 5590057 - 5590144
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    ||||| |||||||||| |||| |||  |  |||||| |||||||||||  |||||||||||||||||||||||||||||| |||||||    
T  5590057 ttcgggtggaccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaata 5590144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 172
Target Start/End: Original strand, 41837951 - 41838110
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatca 113  Q
    ||||| |||||||||| ||||||||     |||||| ||||||| |||  ||||||||||| ||||||| |||||||||| ||||||| || | |||||     
T  41837951 ttcgggtggaccactacaccactttgcatgaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacctataatcg 41838050  T
Q  114 tt-aatttttaatttttctgagtgaaccgtgacccaccatagcccatgaagggctccgcc 172  Q
    || | ||||||||||||| | | |  ||||| ||||||  ||||||||||||||||||||    
T  41838051 ttgattttttaatttttccgggcgggccgtggcccaccccagcccatgaagggctccgcc 41838110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 2317307 - 2317250
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||| || |||||||    
T  2317307 aatttggatcaaccgaaatctaaaaccgacataaaattgtataaaatatcgcaaaata 2317250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 4698052 - 4697995
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| || ||||||||| |||||||||||||||||||||||||||||| |||||||    
T  4698052 aatttggataaaccgaaatctaaaaccgacataaaattgtataaaatctcgcaaaata 4697995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 38567375 - 38567318
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||  |||||||||||||||||||||||||||||| |||||||    
T  38567375 aatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaata 38567318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 43117595 - 43117538
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||  |||||||||||||||||||||||||||||| |||||||    
T  43117595 aatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaata 43117538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 98
Target Start/End: Complemental strand, 1184098 - 1184014
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaa 98  Q
    ||||||||| |||||| |||| |||  |  |||||| |||||||||||  |||||||||||||||||||||||||||||| ||||    
T  1184098 ttcggatgggccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaa 1184014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 1098333 - 1098246
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    ||||| |||||||||| |||| |||    ||||||| |||||||||||  |||||| |||||||| ||||||||||||||||||||||    
T  1098333 ttcggttggaccactacaccaatttgcagaaatttggatcaaccgaaacctaaaactgacataaatttgtataaaatctcacaaaata 1098246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 44 - 111
Target Start/End: Original strand, 7242549 - 7242616
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaat 111  Q
    |||||| ||||||| |||  |||||||||||||||||||||||||||||| ||||||| |||| ||||    
T  7242549 aatttggatcaaccaaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacatataat 7242616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 93
Target Start/End: Complemental strand, 7413307 - 7413228
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctc 93  Q
    ||||| ||||| |||| ||||||||  |  ||||||||||||||||||  |||||||||||||||| |||||||||||||    
T  7413307 ttcgggtggactactacaccactttgagggaatttgaatcaaccgaaacctaaaaccgacataaaaatgtataaaatctc 7413228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 178
Target Start/End: Complemental strand, 8996492 - 8996346
Alignment:
Q  31 accactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcattaat--ttttaatttt 128  Q
    |||| |||||||||  ||| ||||||| ||| |||||||||||| ||||||| ||||||||||  ||||||||| | |  ||||||||  ||||||||||    
T  8996492 accattttatgaaa--ttggatcaacctaaacttaaaaccgacacaaaattgcataaaatctcgtaaaataaacctatggtcattaatttttttaatttt 8996395  T
Q  129 tctgagtgaaccgtgacccaccatagcccatgaagggctccgcctcttaa 178  Q
     | | |||| ||||| |||||| || |||| |||||||||| ||||||||    
T  8996394 ccag-gtgagccgtggcccaccctaacccaagaagggctcctcctcttaa 8996346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 22658230 - 22658317
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    ||||| ||| |||||| |||| ||| ||  |||| | |||||||||||  |||||||||||||||||||||||||||||| |||||||    
T  22658230 ttcgggtgggccactacaccaatttgtgggaattgggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaata 22658317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 7012583 - 7012526
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||| ||||  |||||||||||||||||||||||||||||| |||||||    
T  7012583 aatttggatcaactgaaacctaaaaccgacataaaattgtataaaatctcgcaaaata 7012526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 172
Target Start/End: Complemental strand, 9830740 - 9830611
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcattaattttt-aatttttctgagtgaaccgt 142  Q
    |||||| ||||||| |||  ||||| ||||| ||| ||| |||||||||| |||||||||| | ||||| || |||||| |||||||  | |||  ||||    
T  9830740 aatttggatcaaccaaaacataaaatcgacacaaagttgcataaaatctcgcaaaataaacctataatcgttgattttttaattttttcgggtgggccgt 9830641  T
Q  143 gacccaccatagcccatgaagggctccgcc 172  Q
    | ||||||  ||||||||||||||||||||    
T  9830640 ggcccaccccagcccatgaagggctccgcc 9830611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 98
Target Start/End: Original strand, 24796937 - 24797021
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaa 98  Q
    ||||| |||||||||| |||| |||  |  |||||| |||||||||||  ||||| |||||||||||||||||||||||| ||||    
T  24796937 ttcgggtggaccactacaccaatttgcggtaatttggatcaaccgaaacctaaaatcgacataaaattgtataaaatctcgcaaa 24797021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 44 - 104
Target Start/End: Original strand, 41837868 - 41837928
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaac 104  Q
    |||||| ||||||| |||  ||||| |||||||||||||||||||||||| ||||||||||    
T  41837868 aatttggatcaaccaaaacctaaaatcgacataaaattgtataaaatctcccaaaataaac 41837928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 172
Target Start/End: Complemental strand, 6317039 - 6316880
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatca 113  Q
    ||||| ||| |||||| ||||||||   | |||||| ||||||| |||  ||||| ||||| ||||||| |||||||||||||||||| || | ||||      
T  6317039 ttcgggtgggccactacaccactttgcaagaatttggatcaaccaaaacataaaatcgacacaaaattgcataaaatctcacaaaatagacctataattg 6316940  T
Q  114 tt-aatttttaatttttctgagtgaaccgtgacccaccatagcccatgaagggctccgcc 172  Q
    || | ||||||||||||  | |||  ||||| ||||||  |||||||||| |||||||||    
T  6316939 ttgattttttaattttttcgggtgggccgtggcccaccccagcccatgaaaggctccgcc 6316880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 25642729 - 25642816
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    ||||| |||||||||  ||||||||  || |||||| ||||||| |||  ||||||||||| |||||| ||||||||||| |||||||    
T  25642729 ttcgggtggaccacttcaccactttgcgagaatttggatcaaccaaaacctaaaaccgacacaaaattatataaaatctcgcaaaata 25642816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 101
Target Start/End: Original strand, 3886701 - 3886751
Alignment:
Q  51 atcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    ||||||| |||  |||||||||||||||||||||||||||||| |||||||    
T  3886701 atcaaccaaaacctaaaaccgacataaaattgtataaaatctcgcaaaata 3886751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 172
Target Start/End: Complemental strand, 4231345 - 4231224
Alignment:
Q  51 atcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcatt-aatttttaatttttctgagtgaaccgtgacccac 149  Q
    ||||||| |||  ||||||||||| ||||||| ||||||||||  |||||| || | ||||| || | ||||||||||||| | |||  ||||| |||||    
T  4231345 atcaaccaaaacataaaaccgacacaaaattgcataaaatctcgtaaaatagacctataatcgttgattttttaatttttc-gggtgggccgtggcccac 4231247  T
Q  150 catagcccatgaagggctccgcc 172  Q
    | |||||||||||||| ||||||    
T  4231246 cctagcccatgaaggggtccgcc 4231224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 137
Target Start/End: Original strand, 7242661 - 7242755
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcattaatttt-taatttttctgagtga 137  Q
    |||||| ||||||| |||  ||||||| ||| ||||||| |||||||||| |||||||||| | ||||| || ||||| ||||||||||| ||||    
T  7242661 aatttggatcaaccaaaacataaaaccaacacaaaattgcataaaatctcgcaaaataaacctataatcgttgattttttaatttttctgggtga 7242755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 172
Target Start/End: Complemental strand, 11635911 - 11635762
Alignment:
Q  25 cactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcattaattt--tt 122  Q
    ||||| ||||||||  | ||||||| ||||  |||||  ||||||||||| |||||| |||||||| || ||||||| || | | |||||| ||||  ||    
T  11635911 cactagaccactttgcggaaatttggatcagtcgaaacctaaaaccgacacaaaattatataaaatttcgcaaaatagacctatgatcattgatttattt 11635812  T
Q  123 aatttttctgagtgaaccgtgacccaccatagcccatgaagggctccgcc 172  Q
    |||||||  | |||   |||| |||||| |||||||||||||||||||||    
T  11635811 aattttttcgggtgggtcgtggcccaccctagcccatgaagggctccgcc 11635762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 150
Target Start/End: Complemental strand, 17836590 - 17836452
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatt-taatc 112  Q
    ||||||||| |||||| | ||||||    ||| ||| |||| ||||||  ||||||||||| ||||||||||||||||| |||||||| || || ||||     
T  17836590 ttcggatgggccactacatcactttgcagaaacttggatcacccgaaacctaaaaccgacacaaaattgtataaaatcttacaaaatacaccttataatt 17836491  T
Q  113 attaa-tttttaatttttctgagtgaaccgtgacccacc 150  Q
    ||||| ||||||||||| |   ||| |||||||||||||    
T  17836490 attaattttttaattttaccaggtggaccgtgacccacc 17836452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 172
Target Start/End: Complemental strand, 1183955 - 1183826
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatc-attaatttttaatttttctgagtgaaccgt 142  Q
    |||||||||||||| |||  ||||||||| | ||||||| |||||||||| ||||||| |  | |||||  ||| |||||||||||| |   ||  ||||    
T  1183955 aatttgaatcaaccaaaacataaaaccgatacaaaattgcataaaatctcgcaaaatagatctataatcgtttattttttaattttttttgttgggccgt 1183856  T
Q  143 gacccaccatagcccatgaagggctccgcc 172  Q
    | ||||||  ||||||||||||||||||||    
T  1183855 ggcccaccccagcccatgaagggctccgcc 1183826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 2317194 - 2317101
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcatt-aatttttaatttttctgagtg 136  Q
    |||||| ||||||| |||  ||||||| ||| |||||||||||||||||| ||||||| || | ||||| || | ||||||||||||| |||||    
T  2317194 aatttggatcaaccaaaacataaaaccaacacaaaattgtataaaatctcgcaaaatagacctataatcgttgattttttaatttttccgagtg 2317101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 4231465 - 4231416
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctc 93  Q
    |||||| |||||||||||  ||||| ||||||||||||||||||||||||    
T  4231465 aatttggatcaaccgaaacctaaaatcgacataaaattgtataaaatctc 4231416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 172
Target Start/End: Original strand, 5590200 - 5590329
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcatt-aatttttaatttttctgagtgaaccgt 142  Q
    |||||| ||||||| |||  ||||||||||| ||||||| ||||||||||  |||||| || | || || || | ||||||||||||| | |||  ||||    
T  5590200 aatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgaaaaatagacctatagtcgttgattttttaatttttccgggtgggccgt 5590299  T
Q  143 gacccaccatagcccatgaagggctccgcc 172  Q
    | ||||||  ||||||| ||||||||||||    
T  5590300 ggcccaccccagcccattaagggctccgcc 5590329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 21435085 - 21435028
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| ||||||| |||  |||||||||||||||||||||||||||||  |||||||    
T  21435085 aatttggatcaaccaaaacctaaaaccgacataaaattgtataaaatctagcaaaata 21435028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 172
Target Start/End: Original strand, 24797080 - 24797209
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcattaatttttaa-tttttctgagtgaaccgt 142  Q
    |||||| ||||||| |||  ||||||||| | ||||||| |||||||||  ||||||| || | ||||| || |||||||| |||||| |  ||  ||||    
T  24797080 aatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgatttttaaatttttccggatgggccgt 24797179  T
Q  143 gacccaccatagcccatgaagggctccgcc 172  Q
    | ||||||  ||||||||||||||||||||    
T  24797180 ggcccaccccagcccatgaagggctccgcc 24797209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 43117481 - 43117424
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| ||||||| |||  ||||||||||| |||||||||||||||||| |||||||    
T  43117481 aatttggatcaaccaaaacataaaaccgacacaaaattgtataaaatctcgcaaaata 43117424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 99
Target Start/End: Original strand, 3659743 - 3659791
Alignment:
Q  51 atcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaa 99  Q
    |||||||||||  ||||||||| |||||||||||||||||||| |||||    
T  3659743 atcaaccgaaacctaaaaccgatataaaattgtataaaatctcgcaaaa 3659791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 6317122 - 6317063
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaa 103  Q
    |||||| |||| ||||||  ||||| ||||||||||||||||||| |||| |||||||||    
T  6317122 aatttggatcatccgaaacctaaaatcgacataaaattgtataaattctcgcaaaataaa 6317063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 10092530 - 10092443
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    ||||||||| |||||| |||| |||  |  |||||| ||| ||| |||  ||||| |||||||||||||||||||||||| |||||||    
T  10092530 ttcggatgggccactataccaatttgcgggaatttggatctaccaaaacctaaaatcgacataaaattgtataaaatctcgcaaaata 10092443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 44 - 130
Target Start/End: Original strand, 42556120 - 42556207
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcatt-aatttttaatttttc 130  Q
    |||||| ||||||| |||  ||||||||||| ||||||| |||||||||| ||||||| || | ||||| || | |||||||||||||    
T  42556120 aatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacctataatcgttgattttttaatttttc 42556207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 122
Target Start/End: Complemental strand, 7413144 - 7413086
Alignment:
Q  64 taaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcattaattttt 122  Q
    ||||||||||| |||||||||||||||||| ||||||| || | ||||| || ||||||    
T  7413144 taaaaccgacacaaaattgtataaaatctcgcaaaatagacctataatcgttgattttt 7413086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 172
Target Start/End: Original strand, 3659849 - 3659978
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcattaatttt-taatttttctgagtgaaccgt 142  Q
    |||||| ||||||| |||  |||| | |||| ||||||| |||||||||| ||||||| || | ||||| || ||||| ||||||||| | |||  | ||    
T  3659849 aatttggatcaaccaaaacgtaaacctgacacaaaattgcataaaatctcgcaaaatagacttataatcgttgattttataatttttccgggtgggctgt 3659948  T
Q  143 gacccaccatagcccatgaagggctccgcc 172  Q
    | |||| |  ||||||||||||||||||||    
T  3659949 ggcccatcccagcccatgaagggctccgcc 3659978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 41388118 - 41388078
Alignment:
Q  64 taaaaccgacataaaattgtataaaatctcacaaaataaac 104  Q
    ||||||||||| |||||||||||||||||  ||||||||||    
T  41388118 taaaaccgacacaaaattgtataaaatcttgcaaaataaac 41388078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 2e-18; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 12996561 - 12996474
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||||||||||||| ||||||||  |  |||||| || ||||||||  |||||||||||||||||||||||||||||| |||||||    
T  12996561 ttcggatggaccactacaccactttgcgggaatttggattaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaata 12996474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 175
Target Start/End: Original strand, 13405389 - 13405521
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcattaa-tttttaatttttctgagtgaaccgt 142  Q
    |||||| ||||| |||||  ||||||||||| |||||||||||||||||| ||||||| || | ||||| |||| ||||||||||||  | |||   |||    
T  13405389 aatttggatcaatcgaaacctaaaaccgacacaaaattgtataaaatctcgcaaaatagacctataatcgttaattttttaattttttcgggtgggtcgt 13405488  T
Q  143 gacccaccatagcccatgaagggctccgcctct 175  Q
    | ||||||  | |||||||||||||||||||||    
T  13405489 ggcccaccccaacccatgaagggctccgcctct 13405521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 7022093 - 7022006
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    ||||| ||| |||||| |||| ||| ||  |||||| |||||||||||  |||||||||||||||||||||||||||||| |||||||    
T  7022093 ttcgggtgggccactacaccaatttgtgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaata 7022006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 12698769 - 12698682
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    ||||| |||||||||| |||| |||  |  |||||| |||||||||||  ||||| ||||||||||||||||||||||||||||||||    
T  12698769 ttcgggtggaccactacaccaatttgcgggaatttggatcaaccgaaacctaaaagcgacataaaattgtataaaatctcacaaaata 12698682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 101
Target Start/End: Complemental strand, 8560672 - 8560614
Alignment:
Q  43 aaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    ||||||| |||||||||||  |||||||||| |||||||||||||||||||||||||||    
T  8560672 aaatttggatcaaccgaaacctaaaaccgacgtaaaattgtataaaatctcacaaaata 8560614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 14 - 172
Target Start/End: Complemental strand, 12698657 - 12698497
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatca 113  Q
    ||||||||| |||||| ||||||||     |||||| ||||||| |||  ||||||||||| |||||||||||||||||| ||||||| || | ||||      
T  12698657 ttcggatgggccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgtataaaatctcgcaaaatagacctataattg 12698558  T
Q  114 ttaattttt--aatttttctgagtgaaccgtgacccaccatagcccatgaagggctccgcc 172  Q
    || ||||||  |||||||| | ||   ||||| ||||||  ||||||||||||||||||||    
T  12698557 ttgattttttaaatttttccgggtcggccgtggcccaccccagcccatgaagggctccgcc 12698497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 2660721 - 2660808
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    ||||| |||||||||| |||| |||  |  |||||| |||||||||||  ||||| |||||||||||||||||||||||| |||||||    
T  2660721 ttcgggtggaccactacaccaatttgcgggaatttggatcaaccgaaacctaaaatcgacataaaattgtataaaatctcgcaaaata 2660808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 23258837 - 23258924
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    ||||| |||||||||| |||| |||    ||||||| ||||||| |||  |||||||||| |||||||||||||||||||||||||||    
T  23258837 ttcggttggaccactacaccaatttgcagaaatttggatcaaccaaaagctaaaaccgacgtaaaattgtataaaatctcacaaaata 23258924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 23258951 - 23259038
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    ||||| |||||||||| |||| |||    ||||||| ||||||| |||  |||||||||| |||||||||||||||||||||||||||    
T  23258951 ttcggttggaccactacaccaatttgcagaaatttggatcaaccaaaagctaaaaccgacgtaaaattgtataaaatctcacaaaata 23259038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 175
Target Start/End: Complemental strand, 31489981 - 31489825
Alignment:
Q  17 ggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcatta 116  Q
    ||||||| ||||| |||||||| ||| |||||| || |||  ||| |||||| ||| | |||||| ||||||||||||||||||| |||||  ||| |||    
T  31489981 ggatggatcactacaccactttgtgagaatttggattaactaaaacttaaaatcgatacaaaattatataaaatctcacaaaatagacatt--atcgtta 31489884  T
Q  117 atttttaatttttctgagtgaaccgtgacccaccatagcccatgaagggctccgcctct 175  Q
    |||||||| ||||  | |||   | || |||||| ||||| ||||||||||| ||||||    
T  31489883 atttttaaatttttcgggtgggtcttggcccaccctagcctatgaagggctctgcctct 31489825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 11450417 - 11450466
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctc 93  Q
    |||||| |||||||||||  ||||||||||||||||||||||||||||||    
T  11450417 aatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctc 11450466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 14883074 - 14883131
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||| |||| |||||||||| ||||||||||||||| ||||||    
T  14883074 aatttggatcaaccgaaatctaaagccgacataaatttgtataaaatctcaaaaaata 14883131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 101
Target Start/End: Original strand, 24635359 - 24635440
Alignment:
Q  20 tggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||||||| |||| |||  | ||||||| |||||||||||  |||||||||  |||| ||||||||||||||||||||||    
T  24635359 tggaccactacaccaatttgcggaaatttggatcaaccgaaacctaaaaccgatttaaatttgtataaaatctcacaaaata 24635440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 172
Target Start/End: Complemental strand, 26468561 - 26468452
Alignment:
Q  64 taaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcatt-aatttttaatttttctgagtgaaccgtgacccaccatagcccatgaa 162  Q
    ||||||||||| |||||||||||||||||| ||||||| || | ||||  || | |||||||||||||  |||| |||||| |||| |  ||||||||||    
T  26468561 taaaaccgacacaaaattgtataaaatctcgcaaaatagacctataatagttgattttttaatttttccaagtggaccgtggcccatcccagcccatgaa 26468462  T
Q  163 gggctccgcc 172  Q
     |||||||||    
T  26468461 aggctccgcc 26468452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 26468694 - 26468637
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||  |||||| ||||||||||||||||||||||| |||||||    
T  26468694 aatttggatcaaccgaaacctaaaactgacataaaattgtataaaatctcgcaaaata 26468637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 34023455 - 34023504
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctc 93  Q
    |||||| |||||||||||  ||||||||||||||||||||||||||||||    
T  34023455 aatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctc 34023504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 34127743 - 34127686
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||  |||||||||||||||||||||||||||||  |||||||    
T  34127743 aatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatcttgcaaaata 34127686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 44 - 130
Target Start/End: Complemental strand, 7021950 - 7021863
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcattaat-ttttaatttttc 130  Q
    |||||| ||||||| |||  |||||| |||| ||||||| |||||||||| ||||||| || | ||||||||||| ||||||||||||    
T  7021950 aatttggatcaaccaaaacataaaactgacacaaaattgcataaaatctcgcaaaatagacctataatcattaattttttaatttttc 7021863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 54 - 101
Target Start/End: Complemental strand, 15469325 - 15469278
Alignment:
Q  54 aaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    ||||||||  |||||||||||||||||||||||||||||| |||||||    
T  15469325 aaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaata 15469278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 172
Target Start/End: Original strand, 16461435 - 16461564
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcatt-aatttttaatttttctgagtgaaccgt 142  Q
    |||||| ||||||| |||  ||||||||||| ||||||| |||||||||| |||||||  | | ||||| || | |||||||| |||| | |||  ||||    
T  16461435 aatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaataggcttataatcgttgattttttaatatttccgggtgggccgt 16461534  T
Q  143 gacccaccatagcccatgaagggctccgcc 172  Q
    ||||||||  || ||||||||| |||||||    
T  16461535 gacccaccccagtccatgaaggactccgcc 16461564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 172
Target Start/End: Complemental strand, 10290557 - 10290461
Alignment:
Q  77 aaattgtataaaatctcacaaaataaacatttaatcattaattttt-aatttttctgagtgaaccgtgacccaccatagcccatgaagggctccgcc 172  Q
    ||||||||||||||||| |||| || || | | ||| ||||||||| ||||| |||| |||  || || |||||| |||||||||||||||||||||    
T  10290557 aaattgtataaaatctcgcaaagtagacctatgatcgttaattttttaatttctctgggtgggccatggcccaccctagcccatgaagggctccgcc 10290461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 172
Target Start/End: Complemental strand, 12996416 - 12996288
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcattaatttttaatttttctgagtgaaccgtg 143  Q
    |||||| ||||| |||||  ||||||||| | |||||||||||||||||| ||||||| |  | | |||||| |||||| | ||||| ||||   | |||    
T  12996416 aatttgcatcaatcgaaacctaaaaccgatacaaaattgtataaaatctcgcaaaatatatctattatcattgattttttaattttccgagtaggctgtg 12996317  T
Q  144 acccaccatagcccatgaagggctccgcc 172  Q
     ||||||  | ||||||||||||||||||    
T  12996316 gcccaccccaacccatgaagggctccgcc 12996288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 111
Target Start/End: Original strand, 16461321 - 16461389
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaacc-gacataaaattgtataaaatctcacaaaataaacatttaat 111  Q
    ||||||||||||| ||||  ||||||| ||||||||||| ||||||||||| ||||||| |||| ||||    
T  16461321 aatttgaatcaactgaaacctaaaacccgacataaaattatataaaatctcgcaaaatagacatataat 16461389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 9078939 - 9079025
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    ||||| ||| |||||| |||| |||  | ||||||| |||||||||||  |||||||||| ||||||||| | |||||||||||||||    
T  9078939 ttcgggtggtccactacaccaatttgcggaaatttggatcaaccgaaacctaaaaccgacgtaaaattgt-ttaaatctcacaaaata 9079025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 172
Target Start/End: Original strand, 24130240 - 24130394
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatca 113  Q
    ||||| |||||||||| ||||||||     |||||| ||||||| |||  ||||||||||| ||||||| |||||||||| ||||||     | |||||     
T  24130240 ttcgggtggaccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaat-----tataatcg 24130334  T
Q  114 tt-aatttttaatttttctgagtgaaccgtgacccaccatagcccatgaagggctccgcc 172  Q
    || | ||||||||||||| | |||  | ||| ||||||  ||||||||||||||||||||    
T  24130335 ttgattttttaatttttccgggtgggcagtggcccaccccagcccatgaagggctccgcc 24130394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 172
Target Start/End: Original strand, 24635466 - 24635625
Alignment:
Q  14 ttcggatggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatca 113  Q
    |||||||||||||||| ||||||||     |||||| ||||||| |||  ||||||| | | ||||||| |||||||||| |||| || || | |||||     
T  24635466 ttcggatggaccactacaccactttgcaggaatttggatcaaccaaaacataaaaccaatacaaaattgcataaaatctcgcaaattagacctataatcg 24635565  T
Q  114 tt-aatttttaatttttctgagtgaaccgtgacccaccatagcccatgaagggctccgcc 172  Q
    || | ||||||||||||| |  ||  ||||| ||||||  ||||||||||||||| ||||    
T  24635566 ttgattttttaatttttccggatgggccgtggcccaccccagcccatgaagggcttcgcc 24635625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 164
Target Start/End: Complemental strand, 7536562 - 7536468
Alignment:
Q  71 gacataaaattgtataaaatctcacaaaataaacatttaatcattaattttt-aatttttctgagtgaaccgtgacccaccatagcccatgaagg 164  Q
    |||| ||||||||||||||||  |||||||| |  | ||||| ||||||||| ||||||||||  || |||||| |||||| || ||||||||||    
T  7536562 gacacaaaattgtataaaatcctacaaaatagatctataatcgttaatttttaaatttttctggatggaccgtggcccaccctaacccatgaagg 7536468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 172
Target Start/End: Original strand, 2660884 - 2660993
Alignment:
Q  64 taaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcattaattttt-aatttttctgagtgaaccgtgacccaccatagcccatgaa 162  Q
    ||||||||| | ||||||| |||||||||| ||||||| || | ||||| || |||||| |||||||| | |||   |||| |||| |  ||||||||||    
T  2660884 taaaaccgatacaaaattgcataaaatctcgcaaaatagacctataatcgttgattttttaatttttccgggtgggtcgtggcccatcccagcccatgaa 2660983  T
Q  163 gggctccgcc 172  Q
    ||||||||||    
T  2660984 gggctccgcc 2660993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 24130157 - 24130214
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||  |||||||| |||||||| |||||||| ||| |||||||    
T  24130157 aatttggatcaaccgaaacctaaaaccggcataaaatcgtataaaaactcgcaaaata 24130214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 3)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 101
Target Start/End: Complemental strand, 65172 - 65122
Alignment:
Q  51 atcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  65172 atcaaccgaaacctaaaaccgacataaaattgtataaaatctcacaaaata 65122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 51 - 101
Target Start/End: Complemental strand, 65286 - 65236
Alignment:
Q  51 atcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||||||||  |||||||||||||||||||||||||||||| |||||||    
T  65286 atcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaata 65236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 172
Target Start/End: Complemental strand, 65066 - 64937
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcatt-aatttttaatttttctgagtgaaccgt 142  Q
    |||||| ||||||| |||  ||||||||||| ||||||| |||||||||| ||||||| || | ||| | ||   ||||||||||||| | |||  ||||    
T  65066 aatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacctataagcgttgtttttttaatttttccgggtgggccgt 64967  T
Q  143 gacccaccatagcccatgaagggctccgcc 172  Q
    | ||||||  ||||||||||||||||||||    
T  64966 ggcccaccccagcccatgaagggctccgcc 64937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 2)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 19291 - 19234
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||| |||||||||||  |||||||||||||||||||||||||||||| |||||||    
T  19291 aatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaata 19234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 172
Target Start/End: Complemental strand, 19158 - 19049
Alignment:
Q  64 taaaaccgacataaaattgtataaaatctcacaaaataaacatttaatcatt-aatttttaatttttctgagtgaaccgtgacccaccatagcccatgaa 162  Q
    ||||||||||| ||||||| |||||||||| ||||||| || | | ||| || | ||||| ||||||| | |||  ||||| ||||||  ||||||||||    
T  19158 taaaaccgacacaaaattgcataaaatctcgcaaaatagacctatgatcgttgatttttttatttttccgggtgggccgtggcccaccccagcccatgaa 19059  T
Q  163 gggctccgcc 172  Q
    ||||||||||    
T  19058 gggctccgcc 19049  T

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Target: scaffold0002 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 20 - 101
Target Start/End: Complemental strand, 332041 - 331960
Alignment:
Q  20 tggaccactaaaccactttatgaaaatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaata 101  Q
    |||||||||| |||| |||  || |||||| |||||||||||  ||||| |||||||||||||||||||||||| |||||||    
T  332041 tggaccactacaccaatttgcgagaatttggatcaaccgaaacctaaaatcgacataaaattgtataaaatctcgcaaaata 331960  T

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Target: scaffold0131 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 100
Target Start/End: Complemental strand, 11423 - 11367
Alignment:
Q  44 aatttgaatcaaccgaaatttaaaaccgacataaaattgtataaaatctcacaaaat 100  Q
    |||||| |||||||||||  |||||||||||||||||||||||||||||| ||||||    
T  11423 aatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaat 11367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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