View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1741-Insertion-3 (Length: 201)
Name: NF1741-Insertion-3
Description: NF1741
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1741-Insertion-3 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 182; Significance: 1e-98; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 182; E-Value: 1e-98
Query Start/End: Original strand, 8 - 201
Target Start/End: Complemental strand, 49511963 - 49511771
Alignment:
| Q |
8 |
cgatacactacaaactcttgccggatgcaatttcgatctctgcaacaaggtgcccttaatcacaacactgtctctatgttaattttccaatttcgtttta |
107 |
Q |
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| T |
49511963 |
cgatacactacaaactcttgccggatgcaatttcgatctctgcaacaaggtgcccttaatcacaaca-tgtctctatgttaattttccaatttcgtttta |
49511865 |
T |
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| Q |
108 |
agtagattgacttaggcttctcaattttaaaattgttatcatatttattaaaatcctttttccaatgaatttgtcatcacacaaagtgtactta |
201 |
Q |
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| T |
49511864 |
agtagattgacttaagcttctcaattttaaaattgttatcatatttattaaaatcctttttccaatgaatttgtcatcacacaaagtgtactta |
49511771 |
T |
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