View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17418_low_19 (Length: 210)
Name: NF17418_low_19
Description: NF17418
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17418_low_19 |
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Alignment Details
Target: chr7 (Bit Score: 165; Significance: 2e-88; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 12 - 192
Target Start/End: Complemental strand, 20332128 - 20331948
Alignment:
| Q |
12 |
ccaacaaaatataaaaacctaacacttatcttcaatcttaagtaaccttgattttagttctaatcaaaaaatttgatttggaatttcatagatgagacta |
111 |
Q |
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| T |
20332128 |
ccaacacaatataaaaacctaacacttatcttcaatcttaagtaaccttgattttagttctaatcaaaaaatttgatttggaatttcatagatgagacta |
20332029 |
T |
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| Q |
112 |
gagatgaactttgaatttttgagttcttttaacttgattctaaagtgcttcataactttcgattgtgatctacttgatttt |
192 |
Q |
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| T |
20332028 |
gtgatgaactttgaatttttgagttcttttaacttgattctaaagtgcttcataactttttattgtgatctacttgatttt |
20331948 |
T |
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