View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1741_high_11 (Length: 312)
Name: NF1741_high_11
Description: NF1741
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1741_high_11 |
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Alignment Details
Target: chr7 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 1 - 296
Target Start/End: Original strand, 35425845 - 35426142
Alignment:
| Q |
1 |
aggacattgtatttgcaagaaaacagatgtggagacctggtcctccttttgtcagagaatgtcagcatttagcaagcattcagtcttcattatgcagaac |
100 |
Q |
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| T |
35425845 |
aggacattgtatttgcaagaaaacagatgtggagacctggtcctccttttgtcagagaatgtcaacatttagcaagcattcagtcttcattatgcagaac |
35425944 |
T |
|
| Q |
101 |
aatttaactttctagacaagattaaagatgtgcatcattgtatgtataacatcaagacaagattagaaatcaaattttaaattct-nnnnnnnnnnntca |
199 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
35425945 |
aatttaactttctagacaagattaaagatgtgcatcattgtatgtataacatcaagacaagattagaaatcaaattttaaattctaaaaaaaaaaaatca |
35426044 |
T |
|
| Q |
200 |
gagaaactacaatattttcaatgtagag-agatgtaaaacattagacaaccaatccaaattaaaattagatcatgcatgcgacataacatgttaatcc |
296 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35426045 |
gagaaactacaatattttcaatgtagagaagatgtaaaacattagacaaccaatccaaattaaaattagatcatgcatgcgacataacatgttaatcc |
35426142 |
T |
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