View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17421_high_9 (Length: 425)
Name: NF17421_high_9
Description: NF17421
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17421_high_9 |
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Alignment Details
Target: chr7 (Bit Score: 383; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 383; E-Value: 0
Query Start/End: Original strand, 11 - 409
Target Start/End: Complemental strand, 47813925 - 47813528
Alignment:
| Q |
11 |
cgaagaatataccgaatgattcacctttatttttattatgccaattcgcaccaccaaaatggatctcaaattctgtacacaaacctgaaaccaagaataa |
110 |
Q |
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| T |
47813925 |
cgaaaaatataccgaatgattcacctttatttttattatgccaattcgcaccaccaaaatggatctcaaattctgtacacaaacctgaaaccaagaataa |
47813826 |
T |
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| Q |
111 |
ttaacttatataaaagagaaatagaaatctcctaaatttccacttcctcatgatggttgacctgatttaatgaatacatcgtaccaaaattccatttctt |
210 |
Q |
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| T |
47813825 |
ttaacttatataaa-gagaaatagaaatctcctaaatttccacttcctcatgatggttgacctgatttaatgaatacatcgtaccaaaattcaatttctt |
47813727 |
T |
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| Q |
211 |
cactaatctgacttgaaccatgatggtccatattttctcctaaagtatcacaagaggttgcattgtaaaatcctgaccctacagtgtttggatccttgct |
310 |
Q |
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| T |
47813726 |
cactaatctgacttgaaccatgatggtccatattttctcctaaagtatcacaagaggttgcattgtaaaatcctgaccctacagtgtttggatccttgct |
47813627 |
T |
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| Q |
311 |
tgagactaaaccataattggaaataactcttttttcaccgacactactataaccatcacttgcttgtgcctcatccaaagtatatgaataagaggtatt |
409 |
Q |
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| T |
47813626 |
tgagactaaaccataattggaaataactcttttttcaccgacactactataaccatcacttgcttgtgcctcatccaaagtatatgaataagaggtatt |
47813528 |
T |
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