View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17421_low_24 (Length: 268)
Name: NF17421_low_24
Description: NF17421
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17421_low_24 |
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Alignment Details
Target: chr4 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 23331005 - 23330755
Alignment:
| Q |
1 |
caaaaacccttaactagctaggttcactagggttctagcgttgaacaattagaaatctaacttcgtaacgttattatgaattgtaatcatgttattacaa |
100 |
Q |
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| T |
23331005 |
caaaaacccttaactagctaggttcactagggttctagcgttgaacaattagaaatctaacttcgtaacgttattatgaattgtaatcatgttattacaa |
23330906 |
T |
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| Q |
101 |
gtcttgatatttttaaattctaacttaatcatcaattacatagatcaattgaactatacttattaaagtacacatcataacaattatactaattataatg |
200 |
Q |
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| T |
23330905 |
gtcttcatatttttaaattctaacttaatcatcaattacatagatcaattgaactatacttattaaagtacacatcataacaattatactaattataatg |
23330806 |
T |
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| Q |
201 |
tgattctaagaggacaaagaactcgtcggtcacaaaacaacgtatacaaca |
251 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23330805 |
tgattctaagaggacaaagaactcgtcggtcacaaaacaacgtatacaaca |
23330755 |
T |
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