View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17422_high_5 (Length: 530)

Name: NF17422_high_5
Description: NF17422
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17422_high_5
NF17422_high_5
[»] chr5 (41 HSPs)
chr5 (99-517)||(22876935-22877356)
chr5 (15-94)||(13038577-13038657)
chr5 (15-94)||(33709624-33709703)
chr5 (14-94)||(22392695-22392776)
chr5 (15-94)||(1827653-1827733)
chr5 (15-94)||(11926625-11926705)
chr5 (22-94)||(25586926-25586999)
chr5 (22-94)||(6014410-6014482)
chr5 (15-94)||(13108572-13108652)
chr5 (15-94)||(15641228-15641308)
chr5 (15-94)||(27498854-27498934)
chr5 (15-94)||(37495044-37495121)
chr5 (15-85)||(8484784-8484854)
chr5 (21-94)||(32059569-32059643)
chr5 (15-85)||(38631084-38631154)
chr5 (15-94)||(34310136-34310216)
chr5 (22-85)||(15971252-15971315)
chr5 (21-88)||(31288075-31288142)
chr5 (15-93)||(36954813-36954892)
chr5 (27-85)||(27487690-27487748)
chr5 (21-94)||(34049816-34049890)
chr5 (15-85)||(38684212-38684282)
chr5 (21-70)||(18207226-18207275)
chr5 (22-83)||(42193491-42193552)
chr5 (15-94)||(15931053-15931133)
chr5 (15-94)||(30485822-30485902)
chr5 (22-95)||(23270652-23270726)
chr5 (16-96)||(7085750-7085831)
chr5 (23-72)||(19456340-19456389)
chr5 (21-85)||(4603781-4603845)
chr5 (15-94)||(5067295-5067375)
chr5 (38-85)||(3715055-3715102)
chr5 (21-72)||(12398577-12398628)
chr5 (31-85)||(25750750-25750804)
chr5 (16-94)||(26078046-26078127)
chr5 (22-95)||(12317280-12317354)
chr5 (15-72)||(7151346-7151403)
chr5 (21-74)||(10869694-10869747)
chr5 (22-94)||(11465037-11465110)
chr5 (22-82)||(14302829-14302889)
chr5 (21-77)||(37397725-37397781)
[»] chr4 (37 HSPs)
chr4 (15-94)||(33992620-33992700)
chr4 (21-90)||(35229167-35229236)
chr4 (15-95)||(40058975-40059056)
chr4 (15-94)||(19660655-19660735)
chr4 (22-97)||(46714383-46714459)
chr4 (15-75)||(49287872-49287932)
chr4 (15-97)||(52983610-52983693)
chr4 (21-94)||(1985830-1985904)
chr4 (15-95)||(34844881-34844962)
chr4 (15-94)||(22625193-22625273)
chr4 (15-94)||(25852208-25852288)
chr4 (15-94)||(32986191-32986271)
chr4 (15-94)||(33696402-33696482)
chr4 (15-85)||(27528918-27528988)
chr4 (16-77)||(43719189-43719250)
chr4 (15-94)||(5609325-5609405)
chr4 (15-94)||(18875639-18875719)
chr4 (16-94)||(54127466-54127545)
chr4 (15-85)||(51535617-51535687)
chr4 (15-78)||(2351024-2351087)
chr4 (15-93)||(13873418-13873497)
chr4 (15-85)||(20566353-20566424)
chr4 (21-78)||(12710190-12710247)
chr4 (15-94)||(35674864-35674944)
chr4 (21-72)||(7392092-7392143)
chr4 (21-71)||(20078113-20078163)
chr4 (15-77)||(32942382-32942444)
chr4 (21-94)||(36131639-36131713)
chr4 (15-85)||(45787827-45787896)
chr4 (33-78)||(55961883-55961928)
chr4 (15-71)||(20527156-20527212)
chr4 (15-84)||(13584377-13584446)
chr4 (21-78)||(31334555-31334612)
chr4 (46-94)||(40307536-40307585)
chr4 (16-85)||(42245750-42245819)
chr4 (19-70)||(30938217-30938269)
chr4 (37-85)||(34722174-34722222)
[»] chr1 (40 HSPs)
chr1 (15-94)||(8077641-8077721)
chr1 (15-85)||(18646857-18646927)
chr1 (15-85)||(46113525-46113595)
chr1 (15-95)||(4621360-4621441)
chr1 (15-94)||(7197369-7197449)
chr1 (15-94)||(15059525-15059605)
chr1 (15-94)||(24674387-24674467)
chr1 (16-95)||(29057461-29057541)
chr1 (15-94)||(27454989-27455069)
chr1 (15-94)||(30677170-30677250)
chr1 (15-94)||(34778336-34778416)
chr1 (15-85)||(7766850-7766920)
chr1 (21-94)||(21726723-21726797)
chr1 (15-94)||(46607804-46607884)
chr1 (22-76)||(8779866-8779920)
chr1 (15-85)||(24122027-24122097)
chr1 (21-78)||(7578420-7578477)
chr1 (15-72)||(33905633-33905690)
chr1 (46-94)||(6776139-6776187)
chr1 (15-94)||(7946838-7946918)
chr1 (15-94)||(14258550-14258630)
chr1 (15-70)||(9500478-9500533)
chr1 (21-76)||(17935782-17935837)
chr1 (22-85)||(32930753-32930816)
chr1 (15-96)||(168193-168275)
chr1 (16-97)||(25237113-25237195)
chr1 (15-76)||(20487313-20487374)
chr1 (15-94)||(23232388-23232468)
chr1 (15-67)||(36156011-36156063)
chr1 (15-71)||(45859166-45859222)
chr1 (15-85)||(2272348-2272418)
chr1 (15-76)||(23734129-23734190)
chr1 (15-76)||(23741321-23741382)
chr1 (21-74)||(37351590-37351643)
chr1 (15-75)||(19034509-19034569)
chr1 (22-93)||(24216973-24217045)
chr1 (16-94)||(1138573-1138652)
chr1 (21-93)||(1486415-1486486)
chr1 (21-94)||(32729539-32729613)
chr1 (21-85)||(1818738-1818802)
[»] chr7 (44 HSPs)
chr7 (15-93)||(7799955-7800034)
chr7 (15-97)||(40543033-40543116)
chr7 (15-94)||(7175985-7176065)
chr7 (15-94)||(7275275-7275355)
chr7 (15-94)||(21217956-21218036)
chr7 (19-94)||(23854394-23854470)
chr7 (15-93)||(2103054-2103133)
chr7 (15-85)||(21835159-21835229)
chr7 (15-85)||(22119896-22119966)
chr7 (15-94)||(2751269-2751349)
chr7 (15-94)||(10091186-10091266)
chr7 (15-94)||(17212051-17212131)
chr7 (23-94)||(25333417-25333489)
chr7 (16-94)||(18044105-18044184)
chr7 (15-76)||(22703503-22703564)
chr7 (15-94)||(11997847-11997927)
chr7 (22-93)||(19421230-19421302)
chr7 (16-94)||(21370595-21370674)
chr7 (15-78)||(22299864-22299927)
chr7 (29-95)||(31713032-31713099)
chr7 (15-85)||(13332546-13332616)
chr7 (22-84)||(42913643-42913705)
chr7 (16-85)||(23012632-23012701)
chr7 (16-85)||(27312160-27312229)
chr7 (15-94)||(17197073-17197153)
chr7 (23-94)||(27009357-27009429)
chr7 (21-95)||(2344296-2344371)
chr7 (23-85)||(28089824-28089886)
chr7 (21-94)||(39145781-39145855)
chr7 (21-93)||(21574232-21574305)
chr7 (21-95)||(31197588-31197663)
chr7 (16-94)||(32849589-32849668)
chr7 (16-74)||(14199790-14199848)
chr7 (27-85)||(28003844-28003902)
chr7 (21-94)||(43785428-43785502)
chr7 (15-95)||(28950866-28950949)
chr7 (15-85)||(22696328-22696398)
chr7 (15-85)||(28646977-28647047)
chr7 (15-65)||(31273942-31273992)
chr7 (15-84)||(9718110-9718179)
chr7 (22-75)||(27704020-27704073)
chr7 (19-71)||(37473639-37473692)
chr7 (22-94)||(40332097-40332170)
chr7 (15-76)||(42814881-42814942)
[»] chr6 (28 HSPs)
chr6 (15-96)||(9238967-9239049)
chr6 (15-85)||(11448875-11448945)
chr6 (15-94)||(33718581-33718661)
chr6 (12-94)||(11007159-11007242)
chr6 (15-97)||(13753231-13753314)
chr6 (15-94)||(15360221-15360301)
chr6 (15-94)||(22576061-22576141)
chr6 (16-94)||(5360195-5360274)
chr6 (22-85)||(9690768-9690831)
chr6 (16-94)||(12591631-12591710)
chr6 (15-94)||(654269-654349)
chr6 (15-90)||(14212890-14212966)
chr6 (15-94)||(34147340-34147420)
chr6 (15-94)||(34159956-34160036)
chr6 (15-85)||(1344941-1345009)
chr6 (16-94)||(21148634-21148713)
chr6 (15-94)||(3222758-3222837)
chr6 (21-85)||(21982449-21982513)
chr6 (24-77)||(9843950-9844003)
chr6 (15-94)||(28672061-28672141)
chr6 (16-72)||(28968166-28968222)
chr6 (21-94)||(9208246-9208320)
chr6 (15-75)||(11840915-11840975)
chr6 (15-89)||(3907541-3907615)
chr6 (15-77)||(17081177-17081239)
chr6 (15-73)||(17149579-17149637)
chr6 (21-74)||(17706436-17706489)
chr6 (26-94)||(33499468-33499537)
[»] chr3 (47 HSPs)
chr3 (16-94)||(15566623-15566701)
chr3 (15-95)||(45529877-45529958)
chr3 (15-94)||(30807276-30807356)
chr3 (15-94)||(35492905-35492985)
chr3 (15-94)||(40133572-40133652)
chr3 (15-94)||(46576342-46576422)
chr3 (16-95)||(51532782-51532862)
chr3 (13-94)||(34492696-34492778)
chr3 (15-94)||(8456273-8456353)
chr3 (15-94)||(21362937-21363017)
chr3 (21-85)||(25379765-25379829)
chr3 (15-94)||(40940819-40940899)
chr3 (21-85)||(53424305-53424369)
chr3 (16-94)||(25289838-25289917)
chr3 (15-78)||(26108303-26108366)
chr3 (21-95)||(30257617-30257692)
chr3 (15-93)||(52455772-52455851)
chr3 (15-77)||(53234033-53234095)
chr3 (22-83)||(26174119-26174180)
chr3 (22-94)||(29915399-29915472)
chr3 (22-94)||(29964552-29964625)
chr3 (15-83)||(52821758-52821826)
chr3 (21-95)||(48977381-48977456)
chr3 (16-94)||(49258386-49258465)
chr3 (21-95)||(19857046-19857119)
chr3 (16-94)||(32151419-32151497)
chr3 (15-94)||(7485648-7485728)
chr3 (21-77)||(9853628-9853684)
chr3 (15-94)||(31537961-31538041)
chr3 (15-94)||(45272539-45272619)
chr3 (19-85)||(36660774-36660840)
chr3 (15-65)||(39041975-39042025)
chr3 (22-95)||(50582985-50583059)
chr3 (15-95)||(18177010-18177091)
chr3 (15-88)||(53288835-53288908)
chr3 (16-94)||(7470339-7470418)
chr3 (32-94)||(9842915-9842978)
chr3 (21-57)||(1692866-1692902)
chr3 (16-72)||(10083943-10083999)
chr3 (16-72)||(10190866-10190922)
chr3 (21-85)||(25344186-25344250)
chr3 (15-94)||(38732960-38733040)
chr3 (15-75)||(49167070-49167130)
chr3 (15-94)||(55287797-55287877)
chr3 (22-73)||(14343418-14343469)
chr3 (21-84)||(55371414-55371477)
chr3 (15-85)||(4462637-4462707)
[»] chr2 (33 HSPs)
chr2 (13-94)||(30466951-30467033)
chr2 (15-94)||(41313986-41314066)
chr2 (15-97)||(18976548-18976631)
chr2 (15-85)||(17324770-17324840)
chr2 (15-94)||(33827696-33827776)
chr2 (21-94)||(44946182-44946256)
chr2 (15-85)||(44976277-44976347)
chr2 (15-76)||(10582113-10582174)
chr2 (21-78)||(27290599-27290656)
chr2 (15-94)||(24195998-24196078)
chr2 (15-85)||(4852562-4852632)
chr2 (21-94)||(11941339-11941413)
chr2 (22-94)||(36390698-36390769)
chr2 (15-95)||(25293159-25293240)
chr2 (21-94)||(6714410-6714484)
chr2 (15-85)||(8258901-8258971)
chr2 (21-94)||(15037953-15038027)
chr2 (15-72)||(43374448-43374505)
chr2 (21-73)||(34516537-34516589)
chr2 (15-93)||(8192474-8192553)
chr2 (16-95)||(19605969-19606048)
chr2 (15-78)||(23787131-23787194)
chr2 (15-57)||(35171832-35171874)
chr2 (15-72)||(5394034-5394091)
chr2 (15-95)||(32845084-32845165)
chr2 (15-72)||(36242435-36242492)
chr2 (15-72)||(45271401-45271458)
chr2 (25-85)||(918833-918892)
chr2 (16-72)||(1191530-1191586)
chr2 (22-85)||(4567567-4567630)
chr2 (21-75)||(19849847-19849901)
chr2 (21-94)||(32526214-32526288)
chr2 (21-77)||(40997479-40997535)
[»] chr8 (33 HSPs)
chr8 (21-97)||(18532102-18532179)
chr8 (15-94)||(34237778-34237858)
chr8 (15-85)||(28193482-28193552)
chr8 (15-94)||(3734746-3734826)
chr8 (15-91)||(4698846-4698922)
chr8 (15-94)||(4718643-4718723)
chr8 (21-85)||(27746464-27746528)
chr8 (15-94)||(39349254-39349334)
chr8 (15-93)||(19471608-19471687)
chr8 (15-93)||(19542532-19542611)
chr8 (15-93)||(19590085-19590164)
chr8 (15-77)||(15259529-15259591)
chr8 (15-95)||(2618183-2618264)
chr8 (16-94)||(42643242-42643321)
chr8 (21-71)||(2166721-2166771)
chr8 (15-72)||(14632975-14633032)
chr8 (21-78)||(21603245-21603302)
chr8 (16-83)||(264523-264590)
chr8 (16-83)||(651331-651398)
chr8 (16-83)||(837066-837133)
chr8 (23-85)||(8042662-8042724)
chr8 (21-94)||(20305906-20305980)
chr8 (16-70)||(20469940-20469994)
chr8 (21-94)||(21092539-21092613)
chr8 (15-94)||(32879277-32879357)
chr8 (22-85)||(24018390-24018453)
chr8 (15-93)||(42328004-42328082)
chr8 (22-95)||(7558073-7558147)
chr8 (15-87)||(8765649-8765721)
chr8 (21-83)||(11714948-11715010)
chr8 (16-74)||(22200684-22200742)
chr8 (21-94)||(26168977-26169051)
chr8 (21-85)||(28088294-28088358)
[»] scaffold0199 (1 HSPs)
scaffold0199 (15-94)||(8530-8610)
[»] scaffold0623 (1 HSPs)
scaffold0623 (15-85)||(1179-1249)
[»] scaffold0366 (2 HSPs)
scaffold0366 (15-85)||(9422-9492)
scaffold0366 (22-85)||(12130-12193)
[»] scaffold0576 (1 HSPs)
scaffold0576 (15-94)||(5205-5285)
[»] scaffold0459 (1 HSPs)
scaffold0459 (22-85)||(10823-10886)
[»] scaffold0068 (1 HSPs)
scaffold0068 (16-94)||(41768-41847)
[»] scaffold0328 (1 HSPs)
scaffold0328 (15-94)||(14985-15065)
[»] scaffold0070 (1 HSPs)
scaffold0070 (15-94)||(40319-40399)
[»] scaffold0026 (1 HSPs)
scaffold0026 (15-94)||(97489-97569)
[»] scaffold0051 (1 HSPs)
scaffold0051 (15-93)||(52994-53073)
[»] scaffold0717 (1 HSPs)
scaffold0717 (16-84)||(82-150)
[»] scaffold0217 (1 HSPs)
scaffold0217 (21-85)||(7438-7502)
[»] scaffold0028 (1 HSPs)
scaffold0028 (21-95)||(27769-27844)
[»] scaffold0019 (1 HSPs)
scaffold0019 (15-70)||(161828-161883)
[»] scaffold0049 (1 HSPs)
scaffold0049 (21-94)||(66756-66830)
[»] scaffold0460 (1 HSPs)
scaffold0460 (15-76)||(8302-8363)
[»] scaffold0200 (1 HSPs)
scaffold0200 (16-94)||(26667-26746)
[»] scaffold0240 (1 HSPs)
scaffold0240 (22-94)||(12884-12957)


Alignment Details
Target: chr5 (Bit Score: 303; Significance: 1e-170; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 99 - 517
Target Start/End: Complemental strand, 22877356 - 22876935
Alignment:
Q  99 gcattgaatattaacaca--agtacaaccataaattgcaaaaccttttcataggtataaattatttagattgtcaggttagatacaagttacttacttta 196  Q
    ||||||||||||||||||  |||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||     
T  22877356 gcattgaatattaacacataagtacatccatatattgcaaaaccttttcacaggtataaattatttagattgtcaggttagatacaagtcacttactttg 22877257  T
Q  197 attaaaatatcatacttgctagtagatgtctat-taaacaagcttgtcttattgacttgttctgaatctaaaattagttcaatagtttattaattagttt 295  Q
     ||||||||||||||||||| |||||| ||||| ||||||||||||||||||||||||||||||||||||||| |  | |||||||||||||||||||||    
T  22877256 tttaaaatatcatacttgcttgtagatatctatctaaacaagcttgtcttattgacttgttctgaatctaaaactgttccaatagtttattaattagttt 22877157  T
Q  296 ggccactgcttattataagctttcttggaatttcccaattaatggacaacatggccataaactcaatcaagaatagtttatatacaaatttcacttgatt 395  Q
    |||||||||||||||||||| | |||||||||||||     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  22877156 ggccactgcttattataagc-tacttggaatttccc----tatggacaacatggccataaactcaatcaagaatagtttatatacaaatttcacttgact 22877062  T
Q  396 tttgtcttatattaattaaaacttaagccaacccaaatcacgtaggttaagtattaggtgagcctcacg-----agaataaggaacttattggaaaataa 490  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     ||||||||||||||||||||||||||    
T  22877061 tttgtcttatattaattaaaacttaagccaacccaaatcacgtaggttaagtattaggtgagcctcacgagaatagaataaggaacttattggaaaataa 22876962  T
Q  491 aaagtctcacggggataagaaaaactt 517  Q
    |||||||||||||||||||||||||||    
T  22876961 aaagtctcacggggataagaaaaactt 22876935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 13038577 - 13038657
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    ||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||| ||||||||||||    
T  13038577 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaaaccaaccactaggccaaccccaaatgggtt 13038657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 33709624 - 33709703
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaacccaaatgggtt 94  Q
    ||||| ||||||||| |||||||||||||| |||||||||||| ||||||| |||||||||||| |||||||||||||||    
T  33709624 cagagggaatcgaacttgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacccaaatgggtt 33709703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 22392776 - 22392695
Alignment:
Q  14 gcagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    |||||| |||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||| ||| ||||||||||||    
T  22392776 gcagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 22392695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 1827653 - 1827733
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    ||||| |||||||||||||||||||||||| |||||||||||| ||| ||| |||||||||||||||| ||||||||||||    
T  1827653 cagagggaatcgaacctgagacctctggaggagcaaactccaagatctcaagccaaccactaggtcaaccccaaatgggtt 1827733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 11926625 - 11926705
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    ||||| ||||| |||||||||||||||||| |||||||||||| |||||||||||||||||||| ||| ||||||||||||    
T  11926625 cagagggaatctaacctgagacctctggaggagcaaactccaagatcccaaaccaaccactaggccaaccccaaatgggtt 11926705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 22 - 94
Target Start/End: Complemental strand, 25586999 - 25586926
Alignment:
Q  22 aatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    ||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||| ||| ||||||||||||    
T  25586999 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 25586926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 22 - 94
Target Start/End: Original strand, 6014410 - 6014482
Alignment:
Q  22 aatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaacccaaatgggtt 94  Q
    |||||||||||||| ||||||||||||||||||||| ||||||| |||| ||||||| |||||||||| ||||    
T  6014410 aatcgaacctgagatctctggagaagcaaactccaagatcccaagccaatcactaggccaacccaaataggtt 6014482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 13108572 - 13108652
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    ||||| ||||||||||||||| |||||||| |||||||||||| ||||||| |||||||||||| ||| ||||||||||||    
T  13108572 cagagggaatcgaacctgagatctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 13108652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 15641228 - 15641308
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactagg-tcaacccaaatgggtt 94  Q
    ||||| |||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||| | | ||||||||||||    
T  15641228 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggctaaccccaaatgggtt 15641308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 27498854 - 27498934
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    ||||| |||||||||||||||||||| ||| |||||||||||| || |||| |||||||||||||||| ||||||||||||    
T  27498854 cagagggaatcgaacctgagacctctagaggagcaaactccaagattccaagccaaccactaggtcaaccccaaatgggtt 27498934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 37495121 - 37495044
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaacccaaatgggtt 94  Q
    ||||| |||||||||||||||||||||||| |||||||||||| ||| ||| ||||||||||||||  ||||||||||||    
T  37495121 cagagggaatcgaacctgagacctctggaggagcaaactccaagatctcaagccaaccactaggtc--cccaaatgggtt 37495044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 85
Target Start/End: Original strand, 8484784 - 8484854
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaaccc 85  Q
    ||||| ||||| |||||||||||||||||| |||||||||||| ||||||| |||||||||||| ||||||    
T  8484784 cagagggaatcaaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccc 8484854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 32059569 - 32059643
Alignment:
Q  21 gaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    |||||||||||||||||| ||||| |||||||||||| ||||||| |||||||||||| ||| ||||||||||||    
T  32059569 gaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 32059643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 85
Target Start/End: Original strand, 38631084 - 38631154
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaaccc 85  Q
    ||||| |||||||| ||||||||||||||| |||||||||||| ||||||| |||||||||||| ||||||    
T  38631084 cagagggaatcgaatctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccc 38631154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 34310216 - 34310136
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    ||||| |||||||||||||||||||||||| |||||||||||| || |||| || ||||||||| ||| ||||||||||||    
T  34310216 cagagggaatcgaacctgagacctctggaggagcaaactccaagattccaagccgaccactaggccaaccccaaatgggtt 34310136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 15971252 - 15971315
Alignment:
Q  22 aatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaaccc 85  Q
    ||||||||||||||||||||||| |||||||||||| ||||||| |||||||||| | ||||||    
T  15971252 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaagccaaccc 15971315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 31288075 - 31288142
Alignment:
Q  21 gaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaacccaaa 88  Q
    ||||||||| |||||||| ||||| |||||||||||| ||||||| |||||||||||| |||||||||    
T  31288075 gaatcgaacatgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaacccaaa 31288142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 15 - 93
Target Start/End: Complemental strand, 36954892 - 36954813
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggt 93  Q
    ||||| |||||||||||||||||||| ||| |||||||||||| |||||||  ||||||||||| ||| |||||||||||    
T  36954892 cagagggaatcgaacctgagacctctagaggagcaaactccaagatcccaaggcaaccactaggccaaccccaaatgggt 36954813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 27 - 85
Target Start/End: Original strand, 27487690 - 27487748
Alignment:
Q  27 aacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaaccc 85  Q
    |||||||||||||||||  ||||||||||||||||||||| ||||||||||| ||||||    
T  27487690 aacctgagacctctggaagagcaaactccaaaatcccaaatcaaccactaggccaaccc 27487748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 34049890 - 34049816
Alignment:
Q  21 gaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    |||||||||||||||||||||||| |||||||||||| ||||||| ||||| |||||  ||| ||||||||||||    
T  34049890 gaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaactactagcccaaccccaaatgggtt 34049816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 15 - 85
Target Start/End: Complemental strand, 38684282 - 38684212
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaaccc 85  Q
    ||||| |||||||||||||||||||||||| |||||||||||| |||||||  |||||||| || ||||||    
T  38684282 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagtcaaccactgggccaaccc 38684212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 21 - 70
Target Start/End: Complemental strand, 18207275 - 18207226
Alignment:
Q  21 gaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaa 70  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  18207275 gaatcgaacctgagacctctggaggagcaaactccaagatcccaaaccaa 18207226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 42193552 - 42193491
Alignment:
Q  22 aatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaac 83  Q
    ||||||||||||||||||||| |||||||||||||| |||||||  ||||||||||| ||||    
T  42193552 aatcgaacctgagacctctggggaagcaaactccaagatcccaagtcaaccactaggccaac 42193491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 15931133 - 15931053
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    ||||| |||||||||||||||| | || ||||||||||||||| ||||||| | |||||||||| ||| ||||||||||||    
T  15931133 cagagggaatcgaacctgagacttgtgaagaagcaaactccaagatcccaagctaaccactaggccaaccccaaatgggtt 15931053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 30485902 - 30485822
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    ||||| ||||||||||||||||||||| || |||||||||||| ||||||| |||||| || || ||| ||||||||||||    
T  30485902 cagagtgaatcgaacctgagacctctgaaggagcaaactccaagatcccaagccaaccgctgggccaaccccaaatgggtt 30485822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 22 - 95
Target Start/End: Original strand, 23270652 - 23270726
Alignment:
Q  22 aatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggttg 95  Q
    |||||||| |||||||| ||||  |||||||||||| ||||||| |||||||||||| ||| |||||||||||||    
T  23270652 aatcgaacttgagacctttggatgagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggttg 23270726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 7085750 - 7085831
Alignment:
Q  16 agagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtca-acccaaatgggttgc 96  Q
    |||| |||||||||| ||||||||||||| || ||||||||| ||||||| |||||||||| | ||  ||||||||||||||    
T  7085750 agagggaatcgaaccggagacctctggaggagaaaactccaagatcccaagccaaccactaagccagccccaaatgggttgc 7085831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 23 - 72
Target Start/End: Original strand, 19456340 - 19456389
Alignment:
Q  23 atcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaacc 72  Q
    |||||||||||||||||||||| |||||||||||| ||||||| ||||||    
T  19456340 atcgaacctgagacctctggaggagcaaactccaagatcccaagccaacc 19456389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 4603845 - 4603781
Alignment:
Q  21 gaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaaccc 85  Q
    ||||||||| ||||| || ||||| |||||||||||| ||||||| |||||||||||| ||||||    
T  4603845 gaatcgaacttgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaaccc 4603781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 5067375 - 5067295
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaac-ccaaatgggtt 94  Q
    |||||| |||||||||||||| |||||||| ||||||||| || |||||||  ||||||||||  |||| |||||||||||    
T  5067375 cagagaaaatcgaacctgagatctctggaggagcaaactcgaagatcccaagtcaaccactagaccaactccaaatgggtt 5067295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 38 - 85
Target Start/End: Original strand, 3715055 - 3715102
Alignment:
Q  38 tctggagaagcaaactccaaaatcccaaaccaaccactaggtcaaccc 85  Q
    ||||||| |||||||||||| |||||||||||||||||||| ||||||    
T  3715055 tctggaggagcaaactccaagatcccaaaccaaccactaggccaaccc 3715102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 12398577 - 12398628
Alignment:
Q  21 gaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaacc 72  Q
    |||||||||||||||||| ||||| |||||||||||| ||||||| ||||||    
T  12398577 gaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaacc 12398628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 85
Target Start/End: Original strand, 25750750 - 25750804
Alignment:
Q  31 tgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaaccc 85  Q
    |||||||||||||| |||||||||||| |||||||  ||||||||||| ||||||    
T  25750750 tgagacctctggaggagcaaactccaagatcccaagtcaaccactaggccaaccc 25750804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 94
Target Start/End: Original strand, 26078046 - 26078127
Alignment:
Q  16 agagagaatcgaacctgagacctctg--gagaagcaaactccaaaatcccaaacca--accactaggtcaacccaaatgggtt 94  Q
    ||||||||||||||||||||||| ||  |||||||| ||||| || ||||||||||  ||||||||| |||||||| ||||||    
T  26078046 agagagaatcgaacctgagacct-tgaagagaagcatactcccaagtcccaaaccaataccactaggccaacccaagtgggtt 26078127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 22 - 95
Target Start/End: Original strand, 12317280 - 12317354
Alignment:
Q  22 aatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggttg 95  Q
    |||| |||| ||||||||  ||| |||||||||||| || |||| |||||||||||| ||| |||||||||||||    
T  12317280 aatcaaacccgagacctcaagaggagcaaactccaagattccaagccaaccactaggccaaccccaaatgggttg 12317354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 7151403 - 7151346
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaacc 72  Q
    ||||| || |||||||| |||||||| ||| |||||||||||| ||||||| ||||||    
T  7151403 cagagggagtcgaacctaagacctcttgaggagcaaactccaagatcccaagccaacc 7151346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 10869694 - 10869747
Alignment:
Q  21 gaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccac 74  Q
    |||||||||||||||||| ||||| |||||||||||| ||| |||  |||||||    
T  10869694 gaatcgaacctgagacctttggaggagcaaactccaagatcgcaagtcaaccac 10869747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 94
Target Start/End: Original strand, 11465037 - 11465110
Alignment:
Q  22 aatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaaccc-aaatgggtt 94  Q
    ||||||||||||||| | ||||| |||||||||||| ||  ||| |||| ||||||| |||||| |||||||||    
T  11465037 aatcgaacctgagacatttggaggagcaaactccaagatttcaagccaatcactaggccaacccgaaatgggtt 11465110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 14302829 - 14302889
Alignment:
Q  22 aatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa 82  Q
    |||| |||||||||||||| |||||||| |||| || |||||||  |||||||||| ||||    
T  14302829 aatcaaacctgagacctctagagaagcacactctaagatcccaagtcaaccactagatcaa 14302889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 37397781 - 37397725
Alignment:
Q  21 gaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactag 77  Q
    ||||| ||||| |||||| ||||| |||||||||||| ||| ||| |||||||||||    
T  37397781 gaatcaaaccttagacctttggaggagcaaactccaagatcacaagccaaccactag 37397725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 6e-26; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 33992700 - 33992620
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaaccc-aaatgggtt 94  Q
    ||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  33992700 cagagagaatcgaacctaagacctctggaggagcaaactccaagatcccaaaccaaccactaggtcaaccctaaatgggtt 33992620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 21 - 90
Target Start/End: Complemental strand, 35229236 - 35229167
Alignment:
Q  21 gaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaacccaaatg 90  Q
    |||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||| |||||||||||    
T  35229236 gaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacccaaatg 35229167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 40058975 - 40059056
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggttg 95  Q
    |||||||||||||||||||||||||| ||| |||||||||||| ||||||| |||||||||||| ||| |||||||||||||    
T  40058975 cagagagaatcgaacctgagacctctagaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggttg 40059056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 19660655 - 19660735
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaac-ccaaatgggtt 94  Q
    ||||||||||| |||||||||||||||||| |||||||||||| ||||||| |||||||||||| |||| |||||||||||    
T  19660655 cagagagaatcaaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaactccaaatgggtt 19660735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 22 - 97
Target Start/End: Complemental strand, 46714459 - 46714383
Alignment:
Q  22 aatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggttgca 97  Q
    ||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||| ||| |||||||||||||||    
T  46714459 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggttgca 46714383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 49287932 - 49287872
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccact 75  Q
    |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  49287932 cagagagaatcgaacctgagacctctggaggagcaaactccaagatcccaaaccaaccact 49287872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 52983693 - 52983610
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggttgca 97  Q
    ||||| |||||||||||||||||||||||| |||||||||||| ||| ||| |||||||||||| ||| |||||||||||||||    
T  52983693 cagagggaatcgaacctgagacctctggaggagcaaactccaagatctcaagccaaccactaggccaaccccaaatgggttgca 52983610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 1985904 - 1985830
Alignment:
Q  21 gaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    |||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||| ||| ||||||||||||    
T  1985904 gaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaatcccaaatgggtt 1985830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 34844881 - 34844962
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggttg 95  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||| ||| | |||||||||| ||| |||||||||||||    
T  34844881 cagagagaatcgaacctgagacctctggaggagcaaactccaagatctcaagcaaaccactaggccaaccccaaatgggttg 34844962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 22625193 - 22625273
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaacc-caaatgggtt 94  Q
    ||||| |||||||||||||||||||||||| || ||||||||| ||||||| |||||||||||| ||||| ||||||||||    
T  22625193 cagagggaatcgaacctgagacctctggaggagtaaactccaagatcccaagccaaccactaggccaacctcaaatgggtt 22625273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 25852288 - 25852208
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    ||||| |||||||||||||||||| ||||| |||||||||||| ||||||| |||||||||||| ||| ||||||||||||    
T  25852288 cagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 25852208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 32986271 - 32986191
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    ||||| |||| ||||||||||||||||||| |||||||||||| ||||||| |||||||||||| ||| ||||||||||||    
T  32986271 cagagggaattgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 32986191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 33696402 - 33696482
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaaccc-aaatgggtt 94  Q
    ||||| |||| ||||||||||||||||||| |||||||||||| ||||||| |||||||||||| |||||| |||||||||    
T  33696402 cagagggaattgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccctaaatgggtt 33696482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 85
Target Start/End: Original strand, 27528918 - 27528988
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaaccc 85  Q
    ||||| |||||||||||||||||||||||| |||||||||||| ||||||| |||||||||| | ||||||    
T  27528918 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaagccaaccc 27528988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 43719189 - 43719250
Alignment:
Q  16 agagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactag 77  Q
    |||||||||||||||||| |||||||||| |||||||||||| ||| |||||||||||||||    
T  43719189 agagagaatcgaacctgaaacctctggaggagcaaactccaagatctcaaaccaaccactag 43719250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 5609325 - 5609405
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    ||||||||||||||||||||||| ||| |  |||||||||||| ||||||| |||||||||||| ||| ||||||||||||    
T  5609325 cagagagaatcgaacctgagaccactgaatgagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 5609405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 18875639 - 18875719
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaacc-caaatgggtt 94  Q
    ||||| ||||||||||||||| || || |||| ||||||| ||||||||||||||||||||| ||||||| ||||||||||    
T  18875639 cagagggaatcgaacctgagatctttgaagaaacaaactctaaaatcccaaaccaaccactatgtcaaccacaaatgggtt 18875719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 16 - 94
Target Start/End: Original strand, 54127466 - 54127545
Alignment:
Q  16 agagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    |||| |||| ||||||||||||| ||||| |||||||||||| ||||||| |||||||||||| ||| ||||||||||||    
T  54127466 agagggaattgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 54127545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 15 - 85
Target Start/End: Complemental strand, 51535687 - 51535617
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaaccc 85  Q
    ||||| |||||||||||||||||| ||||| |||||||||||| |||||||  ||||||||||| ||||||    
T  51535687 cagagggaatcgaacctgagacctgtggaggagcaaactccaagatcccaagtcaaccactaggccaaccc 51535617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 78
Target Start/End: Complemental strand, 2351087 - 2351024
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactagg 78  Q
    ||||| |||||||||||||||||||||||| |||||||| ||| || |||| ||||||||||||    
T  2351087 cagagggaatcgaacctgagacctctggaggagcaaacttcaagattccaagccaaccactagg 2351024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 93
Target Start/End: Original strand, 13873418 - 13873497
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggt 93  Q
    ||||| |||||||||||||||||| || || |||||||||||| ||||||| | |||||||||| ||| |||||||||||    
T  13873418 cagagggaatcgaacctgagacctttgaaggagcaaactccaagatcccaagcaaaccactaggccaaccccaaatgggt 13873497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 85
Target Start/End: Complemental strand, 20566424 - 20566353
Alignment:
Q  15 cagagagaatcgaacctgag-acctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaaccc 85  Q
    ||||| |||||||||||||  |||||||||| |||||||||||| ||||||| |||||||||||| ||||||    
T  20566424 cagagggaatcgaacctgatcacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccc 20566353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 12710247 - 12710190
Alignment:
Q  21 gaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactagg 78  Q
    ||||||||||||||||||   |||||||| ||||||| ||||||||||||||||||||    
T  12710247 gaatcgaacctgagaccttaagagaagcatactccaagatcccaaaccaaccactagg 12710190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 35674864 - 35674944
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    ||||| |||||||||||| ||||| ||||  |||||||||||| ||||||| ||||||||| || ||| ||||||||||||    
T  35674864 cagagggaatcgaacctgtgacctttggaagagcaaactccaagatcccaagccaaccacttggccaaccccaaatgggtt 35674944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 7392092 - 7392143
Alignment:
Q  21 gaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaacc 72  Q
    |||||||||||||||||| ||||| |||||||||||| ||||||| ||||||    
T  7392092 gaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaacc 7392143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 20078113 - 20078163
Alignment:
Q  21 gaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaac 71  Q
    ||||| |||||||||||||||||| |||||||||||| ||||||| |||||    
T  20078113 gaatcaaacctgagacctctggaggagcaaactccaagatcccaagccaac 20078163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 32942444 - 32942382
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactag 77  Q
    ||||||||||||||||| | |||||||||| || ||||||||| ||| ||| |||||||||||    
T  32942444 cagagagaatcgaaccttaaacctctggaggagtaaactccaagatctcaagccaaccactag 32942382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 36131639 - 36131713
Alignment:
Q  21 gaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    |||||||||||||||| ||||||| | | |||||||||||||||| | |||||||| | ||| ||||||||||||    
T  36131639 gaatcgaacctgagacatctggaggaacgaactccaaaatcccaagcaaaccactatgccaaccccaaatgggtt 36131713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 85
Target Start/End: Original strand, 45787827 - 45787896
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaaccc 85  Q
    ||||| ||||||||||||||| |||||||| |||||| ||||| || |||| |||||||||||| ||||||    
T  45787827 cagagggaatcgaacctgagatctctggaggagcaaa-tccaagattccaagccaaccactaggccaaccc 45787896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 55961883 - 55961928
Alignment:
Q  33 agacctctggagaagcaaactccaaaatcccaaaccaaccactagg 78  Q
    |||||||||||| |||||||||||| ||||||| ||||||||||||    
T  55961883 agacctctggaggagcaaactccaagatcccaagccaaccactagg 55961928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 71
Target Start/End: Original strand, 20527156 - 20527212
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaac 71  Q
    ||||| ||||| ||| |||||||||||||| | |||||||||||||| |||||||||    
T  20527156 cagagggaatcaaacttgagacctctggaggaacaaactccaaaatctcaaaccaac 20527212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 13584377 - 13584446
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaacc 84  Q
    ||||| ||||||||| |||||| | ||||| |||||||||||| ||| ||  |||||||||||| |||||    
T  13584377 cagagggaatcgaacttgagacttttggaggagcaaactccaatatctcaggccaaccactaggccaacc 13584446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 31334612 - 31334555
Alignment:
Q  21 gaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactagg 78  Q
    ||||||||| ||||||||   |||||||| ||||||| |||||||| |||||||||||    
T  31334612 gaatcgaacttgagaccttaagagaagcacactccaatatcccaaatcaaccactagg 31334555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 40307585 - 40307536
Alignment:
Q  46 agcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    |||| |||||||||||||||||||| |||||||||||  |||||||||||    
T  40307585 agcacactccaaaatcccaaaccaaacactaggtcaattccaaatgggtt 40307536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 42245819 - 42245750
Alignment:
Q  16 agagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaaccc 85  Q
    |||| |||||||||| ||||||| | ||| ||||||||| || |||||||  ||||||||||| ||||||    
T  42245819 agagggaatcgaacccgagacctttagaggagcaaactctaagatcccaagtcaaccactaggccaaccc 42245750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 30938217 - 30938269
Alignment:
Q  19 gagaatcgaacctgagacctc-tggagaagcaaactccaaaatcccaaaccaa 70  Q
    |||||||||||||||||||||  |||| |||| ||||||| ||||||||||||    
T  30938217 gagaatcgaacctgagacctcgaggaggagcacactccaagatcccaaaccaa 30938269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 37 - 85
Target Start/End: Complemental strand, 34722222 - 34722174
Alignment:
Q  37 ctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaaccc 85  Q
    |||||||| |||||||||||| ||||||| |||||||||| | ||||||    
T  34722222 ctctggaggagcaaactccaagatcccaagccaaccactaagccaaccc 34722174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 1e-23; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 8077721 - 8077641
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||| ||| ||||||||||||    
T  8077721 cagagagaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 8077641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 15 - 85
Target Start/End: Complemental strand, 18646927 - 18646857
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaaccc 85  Q
    |||||||||||||||||||||||||||||||||||||||| || ||| ||| |||||||||||||||||||    
T  18646927 cagagagaatcgaacctgagacctctggagaagcaaactcaaagatcacaagccaaccactaggtcaaccc 18646857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 15 - 85
Target Start/End: Original strand, 46113525 - 46113595
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaaccc 85  Q
    ||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||    
T  46113525 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaaaccaaccactaggccaaccc 46113595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 4621360 - 4621441
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggttg 95  Q
    ||||| |||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||| ||| |||||||||||||    
T  4621360 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggttg 4621441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 7197369 - 7197449
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    ||||| |||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||| ||| ||||||||||||    
T  7197369 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 7197449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 15059525 - 15059605
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    |||||||||||||||||||||||||||||| |||||||||||| || |||| |||||||||||| ||| ||||||||||||    
T  15059525 cagagagaatcgaacctgagacctctggaggagcaaactccaagattccaagccaaccactaggccaaccccaaatgggtt 15059605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 24674467 - 24674387
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    ||||| |||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||| ||| ||||||||||||    
T  24674467 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 24674387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 16 - 95
Target Start/End: Original strand, 29057461 - 29057541
Alignment:
Q  16 agagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggttg 95  Q
    |||| |||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||| ||| |||||||||||||    
T  29057461 agagggaatcgaacctgagacctttggagcagcaaactccaagatcccaaaccaaccactaggccaaccccaaatgggttg 29057541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 27454989 - 27455069
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    ||||| |||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||  ||| ||||||||||||    
T  27454989 cagagtgaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactagaccaaccccaaatgggtt 27455069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 30677250 - 30677170
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    ||||| ||||| |||||||||||| ||||| |||||||||| | |||||||||||||||||||||||| ||||||||||||    
T  30677250 cagagggaatcaaacctgagacctttggaggagcaaactcctagatcccaaaccaaccactaggtcaaccccaaatgggtt 30677170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 34778416 - 34778336
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    ||||| ||||| |||||||||||||||||| |||||||||||| ||||||| |||||||||||| ||| ||||||||||||    
T  34778416 cagagggaatcaaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 34778336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 85
Target Start/End: Original strand, 7766850 - 7766920
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaaccc 85  Q
    ||||| |||||||||||||||||||||||| |||||||||||| ||||||| | |||||||||| ||||||    
T  7766850 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagctaaccactaggccaaccc 7766920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 21726797 - 21726723
Alignment:
Q  21 gaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaacc-caaatgggtt 94  Q
    |||||||||||||||||||||||| |||||||| ||| | |||||| ||||||||||||||||| ||||||||||    
T  21726797 gaatcgaacctgagacctctggaggagcaaacttcaagaacccaaatcaaccactaggtcaacctcaaatgggtt 21726723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 46607884 - 46607804
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    ||||| |||||||||||||||||| ||||| |||||||||||| |||||||  ||||||||||| ||| ||||||||||||    
T  46607884 cagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagtcaaccactaggccaaccccaaatgggtt 46607804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 22 - 76
Target Start/End: Original strand, 8779866 - 8779920
Alignment:
Q  22 aatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccacta 76  Q
    ||||||| |||||||||||||||||||||||||||| |||||||| |||||||||    
T  8779866 aatcgaagctgagacctctggagaagcaaactccaagatcccaaatcaaccacta 8779920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 15 - 85
Target Start/End: Complemental strand, 24122097 - 24122027
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaaccc 85  Q
    ||||| |||||||||||||||||||||||| ||||||| |||| ||||||| |||||||||| | ||||||    
T  24122097 cagagggaatcgaacctgagacctctggaggagcaaaccccaagatcccaagccaaccactaagccaaccc 24122027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 7578477 - 7578420
Alignment:
Q  21 gaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactagg 78  Q
    |||||||||||||||||||||||| | |||||||||| ||||||| ||||||||||||    
T  7578477 gaatcgaacctgagacctctggaggaacaaactccaagatcccaagccaaccactagg 7578420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 33905633 - 33905690
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaacc 72  Q
    ||||| |||||||||||||||||||||||| |||||||||||| ||||||| ||||||    
T  33905633 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaacc 33905690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 6776187 - 6776139
Alignment:
Q  46 agcaaactccaaaatcccaaaccaaccactaggtcaacccaaatgggtt 94  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||||    
T  6776187 agcaaactccaagatcccaaaccaaccactaggccaacccaaatgggtt 6776139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 7946918 - 7946838
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtc-aacccaaatgggtt 94  Q
    ||||| ||||||||| |||||||||||||| |||||||| ||| ||| ||| |||||||||||||| | ||||||||||||    
T  7946918 cagagggaatcgaacttgagacctctggaggagcaaacttcaagatctcaagccaaccactaggtcgaccccaaatgggtt 7946838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 14258550 - 14258630
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    ||||| |||||||||| ||||| ||||||| | |||||||||| ||||||| |||||||||||| ||| ||||||||||||    
T  14258550 cagagggaatcgaaccagagacatctggaggaacaaactccaagatcccaagccaaccactaggccaagcccaaatgggtt 14258630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 9500478 - 9500533
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaa 70  Q
    ||||||||||||||||||||||||||| || |||||||||||| ||||||| ||||    
T  9500478 cagagagaatcgaacctgagacctctgaaggagcaaactccaagatcccaagccaa 9500533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 21 - 76
Target Start/End: Complemental strand, 17935837 - 17935782
Alignment:
Q  21 gaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccacta 76  Q
    |||||||||||||||||||||||| |||||||||||| |||||||  |||||||||    
T  17935837 gaatcgaacctgagacctctggaggagcaaactccaagatcccaagtcaaccacta 17935782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 32930816 - 32930753
Alignment:
Q  22 aatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaaccc 85  Q
    |||||||| ||||||||||| || || ||||||||| || ||||||||||||||||||||||||    
T  32930816 aatcgaacttgagacctctgaaggagtaaactccaagattccaaaccaaccactaggtcaaccc 32930753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 168275 - 168193
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaac-ccaaatgggttgc 96  Q
    ||||| |||||||||||||||||| || |  ||||||||| || ||||||| |||||||||||| |||| |||||||||||||    
T  168275 cagagggaatcgaacctgagacctttgaaagagcaaactctaagatcccaagccaaccactaggccaactccaaatgggttgc 168193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 25237113 - 25237195
Alignment:
Q  16 agagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaac-ccaaatgggttgca 97  Q
    |||| ||||||||||||||||||   |||||||||||||||| ||||||||| ||||| |||| |||| | ||||||||||||    
T  25237113 agagggaatcgaacctgagaccttgagagaagcaaactccaagatcccaaactaaccattaggccaactctaaatgggttgca 25237195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 15 - 76
Target Start/End: Original strand, 20487313 - 20487374
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccacta 76  Q
    ||||| ||||||||| |||||||||||||| |||||||||||| ||||| | ||||||||||    
T  20487313 cagagggaatcgaacttgagacctctggaggagcaaactccaagatcccgagccaaccacta 20487374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 23232388 - 23232468
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    ||||| ||||||||||||| |||||||||  |||||||| ||| |||||||  ||||||||||| ||| ||||||||||||    
T  23232388 cagagggaatcgaacctgaaacctctggaagagcaaacttcaagatcccaagtcaaccactaggccaatcccaaatgggtt 23232468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 36156011 - 36156063
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaac 67  Q
    ||||| ||||||||||||| |||||||||| |||||||||||| |||||||||    
T  36156011 cagagggaatcgaacctgacacctctggaggagcaaactccaagatcccaaac 36156063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 71
Target Start/End: Original strand, 45859166 - 45859222
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaac 71  Q
    ||||| |||||||||||||||||||| ||| |||||||||||| ||||||| |||||    
T  45859166 cagagggaatcgaacctgagacctctagaggagcaaactccaagatcccaagccaac 45859222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 85
Target Start/End: Complemental strand, 2272418 - 2272348
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaaccc 85  Q
    ||||| ||||| ||||||||||||||| || ||||||||| || |||||||  ||||||||||| ||||||    
T  2272418 cagagggaatcaaacctgagacctctgtaggagcaaactctaagatcccaagtcaaccactaggccaaccc 2272348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 15 - 76
Target Start/End: Complemental strand, 23734190 - 23734129
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccacta 76  Q
    ||||| |||||||||||||||||||||||| |||||| || || ||||||| ||||| ||||    
T  23734190 cagagggaatcgaacctgagacctctggaggagcaaattctaagatcccaagccaactacta 23734129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 15 - 76
Target Start/End: Complemental strand, 23741382 - 23741321
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccacta 76  Q
    ||||| |||||||||||||||||||||||| |||||| || || ||||||| ||||| ||||    
T  23741382 cagagggaatcgaacctgagacctctggaggagcaaattctaagatcccaagccaactacta 23741321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 37351590 - 37351643
Alignment:
Q  21 gaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccac 74  Q
    |||||||||||||||| | ||||| |||||||||||| ||||||| ||||||||    
T  37351590 gaatcgaacctgagacatttggaggagcaaactccaagatcccaagccaaccac 37351643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 19034509 - 19034569
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccact 75  Q
    |||||| |||||||||||| |||| | ||| | |||||||||| |||||||||||||||||    
T  19034509 cagagataatcgaacctgaaaccttttgaggaacaaactccaagatcccaaaccaaccact 19034569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 93
Target Start/End: Complemental strand, 24217045 - 24216973
Alignment:
Q  22 aatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggt 93  Q
    |||||||||||||||||   ||| |||| ||||||| |||||||  ||||||||||||||| |||||||||||    
T  24217045 aatcgaacctgagaccttgagaggagcacactccaagatcccaagtcaaccactaggtcaaccccaaatgggt 24216973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 94
Target Start/End: Complemental strand, 1138652 - 1138573
Alignment:
Q  16 agagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    ||||||| |||||||| ||||||   ||| |||| ||||||| ||| ||| |||||||||||||||| ||||||||||||    
T  1138652 agagagattcgaacctaagaccttgagaggagcacactccaagatctcaagccaaccactaggtcaaccccaaatgggtt 1138573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 1486486 - 1486415
Alignment:
Q  21 gaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggt 93  Q
    ||||||||||||||||||   ||| ||||  |||||| ||||||| |||||||||||||||| |||||||||||    
T  1486486 gaatcgaacctgagaccttgagagtagca--ctccaagatcccaagccaaccactaggtcaaccccaaatgggt 1486415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 32729613 - 32729539
Alignment:
Q  21 gaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    |||||||||||||||| |   ||| ||||||||| || ||||||| |||||||||||| ||| ||||||||||||    
T  32729613 gaatcgaacctgagactttgagaggagcaaactcgaagatcccaagccaaccactaggccaaccccaaatgggtt 32729539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 1818802 - 1818738
Alignment:
Q  21 gaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaaccc 85  Q
    ||||||||||||| |||||||||  |||||||||||| |||| || ||||| || ||| ||||||    
T  1818802 gaatcgaacctgaaacctctggaagagcaaactccaagatcctaagccaactaccaggccaaccc 1818738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 6e-23; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 15 - 93
Target Start/End: Original strand, 7799955 - 7800034
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggt 93  Q
    ||||| |||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||| |||||||||||    
T  7799955 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggtcaaccccaaatgggt 7800034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 40543033 - 40543116
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggttgca 97  Q
    ||||| |||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||| ||| |||||||||||||||    
T  40543033 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggttgca 40543116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 7175985 - 7176065
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    ||||| |||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||| ||| ||||||||||||    
T  7175985 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 7176065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 7275355 - 7275275
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    ||||| |||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||| ||| ||||||||||||    
T  7275355 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 7275275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 21217956 - 21218036
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    ||||| |||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||| ||| ||||||||||||    
T  21217956 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 21218036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 23854470 - 23854394
Alignment:
Q  19 gagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||| ||| ||||||||||||    
T  23854470 gagaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 23854394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 93
Target Start/End: Complemental strand, 2103133 - 2103054
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggt 93  Q
    ||||| |||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||| ||| |||||||||||    
T  2103133 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggt 2103054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 15 - 85
Target Start/End: Complemental strand, 21835229 - 21835159
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaaccc 85  Q
    ||||| ||||||||||||||| |||||||| |||||||||||| ||||||| |||||||||||||||||||    
T  21835229 cagagggaatcgaacctgagatctctggaggagcaaactccaagatcccaagccaaccactaggtcaaccc 21835159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 15 - 85
Target Start/End: Complemental strand, 22119966 - 22119896
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaaccc 85  Q
    ||||| |||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||| ||||||    
T  22119966 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccc 22119896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 2751349 - 2751269
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    ||||| |||||||||||||||||| ||||| |||||||||||| ||||||| |||||||||||| ||| ||||||||||||    
T  2751349 cagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 2751269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 10091266 - 10091186
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    ||||| |||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||  ||| ||||||||||||    
T  10091266 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactagaccaaccccaaatgggtt 10091186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 17212131 - 17212051
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    |||||||||| ||||||||||||||||||| |||||||||||| ||||||| |||||||||| | ||| ||||||||||||    
T  17212131 cagagagaattgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaagccaaccccaaatgggtt 17212051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 23 - 94
Target Start/End: Complemental strand, 25333489 - 25333417
Alignment:
Q  23 atcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||||||| | ||| ||||||||||||    
T  25333489 atcgaacctgagacctctggagaagcaaactccaagatcccaagccaaccactaagccaaccccaaatgggtt 25333417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 16 - 94
Target Start/End: Complemental strand, 18044184 - 18044105
Alignment:
Q  16 agagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    |||| |||||||||||| ||||||||||| |||||||||||| ||||||| |||||||||||| ||| ||||||||||||    
T  18044184 agagggaatcgaacctgggacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 18044105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 15 - 76
Target Start/End: Complemental strand, 22703564 - 22703503
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccacta 76  Q
    ||||| |||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||    
T  22703564 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccacta 22703503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 11997927 - 11997847
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaacc-caaatgggtt 94  Q
    ||||| |||||||||||||||||||| ||| |||||||||||| ||||||| |||||||||||  ||||| ||||||||||    
T  11997927 cagagggaatcgaacctgagacctctagaggagcaaactccaagatcccaagccaaccactagcccaaccacaaatgggtt 11997847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 22 - 93
Target Start/End: Complemental strand, 19421302 - 19421230
Alignment:
Q  22 aatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggt 93  Q
    ||||||||||||||||||| ||| |||||||||||| ||||||| |||||||||| ||||| |||||||||||    
T  19421302 aatcgaacctgagacctctagaggagcaaactccaagatcccaagccaaccactaagtcaaccccaaatgggt 19421230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 16 - 94
Target Start/End: Complemental strand, 21370674 - 21370595
Alignment:
Q  16 agagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    |||| |||||||||||||||| |||| || || ||||||||| |||||||||||||||||||| ||| ||||||||||||    
T  21370674 agagggaatcgaacctgagacatctgaaggagtaaactccaagatcccaaaccaaccactaggccaaccccaaatgggtt 21370595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 15 - 78
Target Start/End: Complemental strand, 22299927 - 22299864
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactagg 78  Q
    ||||| ||||||||| |||||||||||||| |||||||||||| ||||||| ||||||||||||    
T  22299927 cagagggaatcgaacttgagacctctggaggagcaaactccaagatcccaagccaaccactagg 22299864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 29 - 95
Target Start/End: Original strand, 31713032 - 31713099
Alignment:
Q  29 cctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggttg 95  Q
    |||||||||||| ||| |||||||||||| |||||||||||||||||||| ||| |||||||||||||    
T  31713032 cctgagacctctcgaggagcaaactccaagatcccaaaccaaccactaggccaaccccaaatgggttg 31713099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 15 - 85
Target Start/End: Original strand, 13332546 - 13332616
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaaccc 85  Q
    ||||| |||||| |||||||||||| |||| |||||||||||| ||||||| |||||||||||| ||||||    
T  13332546 cagagggaatcgtacctgagacctcaggaggagcaaactccaagatcccaagccaaccactaggccaaccc 13332616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 22 - 84
Target Start/End: Original strand, 42913643 - 42913705
Alignment:
Q  22 aatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaacc 84  Q
    ||||||||||||||||||| ||| |||||||||||| ||||||| |||||||||||| |||||    
T  42913643 aatcgaacctgagacctctagaggagcaaactccaagatcccaagccaaccactaggccaacc 42913705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 23012632 - 23012701
Alignment:
Q  16 agagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaaccc 85  Q
    |||| ||||| ||||| ||||||||||||||||||||||||| ||||||| ||||||||| || ||||||    
T  23012632 agagggaatcaaacctaagacctctggagaagcaaactccaagatcccaagccaaccactgggccaaccc 23012701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 27312229 - 27312160
Alignment:
Q  16 agagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaaccc 85  Q
    |||| ||||||||||||| |||||| ||| |||||||||||| ||||||| |||||||||||| ||||||    
T  27312229 agagggaatcgaacctgaaacctctagaggagcaaactccaagatcccaagccaaccactaggccaaccc 27312160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 17197073 - 17197153
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtc-aacccaaatgggtt 94  Q
    ||||| ||||||||| |||||||| ||||| |||||||||||| ||| |||||||||||||||| | | ||||||||||||    
T  17197073 cagagggaatcgaacttgagacctatggaggagcaaactccaagatcgcaaaccaaccactaggccgaccccaaatgggtt 17197153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 23 - 94
Target Start/End: Complemental strand, 27009429 - 27009357
Alignment:
Q  23 atcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    |||||||||||||||||||||  |||||||||||| |||| || |||||||||||| ||| ||||||||||||    
T  27009429 atcgaacctgagacctctggatgagcaaactccaagatccgaagccaaccactaggccaaccccaaatgggtt 27009357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 21 - 95
Target Start/End: Complemental strand, 2344371 - 2344296
Alignment:
Q  21 gaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggttg 95  Q
    |||||||| |||||| || ||||| |||||||||||| ||||||| |||||||||||| ||| |||||||||||||    
T  2344371 gaatcgaatctgagagctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggttg 2344296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 23 - 85
Target Start/End: Complemental strand, 28089886 - 28089824
Alignment:
Q  23 atcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaaccc 85  Q
    |||||||||||||| ||||||| |||||||||||| ||| ||| |||||||||||| ||||||    
T  28089886 atcgaacctgagacatctggaggagcaaactccaagatctcaagccaaccactaggccaaccc 28089824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 39145781 - 39145855
Alignment:
Q  21 gaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaacc-caaatgggtt 94  Q
    ||||||||||  |||| ||||||| |||||||||||| |||||||  ||||||||||||||||| ||||||||||    
T  39145781 gaatcgaaccgaagacatctggaggagcaaactccaagatcccaagtcaaccactaggtcaacctcaaatgggtt 39145855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 21574232 - 21574305
Alignment:
Q  21 gaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggt 93  Q
    |||||||||||| |||||   ||| |||| |||||||||||||||||||||||||||| ||| |||||||||||    
T  21574232 gaatcgaacctgtgaccttgagaggagcacactccaaaatcccaaaccaaccactaggccaaccccaaatgggt 21574305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 21 - 95
Target Start/End: Complemental strand, 31197663 - 31197588
Alignment:
Q  21 gaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggttg 95  Q
    ||||| |||||||||| ||||||  |||||||||||| ||||||| |||||||||||  ||| |||||||||||||    
T  31197663 gaatcaaacctgagacatctggatgagcaaactccaagatcccaagccaaccactagaccaaccccaaatgggttg 31197588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 16 - 94
Target Start/End: Complemental strand, 32849668 - 32849589
Alignment:
Q  16 agagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactagg-tcaacccaaatgggtt 94  Q
    |||| ||||| |||| ||||||||||||| |||||||||||| |||||||  ||||||||||| | | ||||||||||||    
T  32849668 agagggaatcaaacccgagacctctggaggagcaaactccaagatcccaagtcaaccactaggctaaccccaaatgggtt 32849589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 14199790 - 14199848
Alignment:
Q  16 agagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccac 74  Q
    |||| |||||||||||||||||||||||| || ||||||||| || ||||| |||||||    
T  14199790 agagggaatcgaacctgagacctctggaggaggaaactccaagattccaaatcaaccac 14199848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 85
Target Start/End: Complemental strand, 28003902 - 28003844
Alignment:
Q  27 aacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaaccc 85  Q
    ||||| |||| ||||||| |||||||||||| ||||||| ||||||||||| |||||||    
T  28003902 aacctaagacttctggaggagcaaactccaagatcccaagccaaccactagatcaaccc 28003844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 43785428 - 43785502
Alignment:
Q  21 gaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    ||||||||| |||||||| ||||| ||||| ||| || ||||||| ||||||| |||||||| ||||||||||||    
T  43785428 gaatcgaacttgagacctttggaggagcaatctcaaagatcccaagccaaccattaggtcaaccccaaatgggtt 43785502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 28950949 - 28950866
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaact---ccaaaatcccaaaccaaccactaggtcaacccaaatgggttg 95  Q
    ||||| || |||||||||||||||||| || ||||||||   |||| | ||||| |||||||||||| ||||| ||||||||||    
T  28950949 cagagggagtcgaacctgagacctctgaaggagcaaactactccaagaccccaagccaaccactaggccaacctaaatgggttg 28950866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 85
Target Start/End: Complemental strand, 22696398 - 22696328
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaaccc 85  Q
    ||||| ||||| ||||||||||||   ||| |||| ||||||| |||||||| ||||||||||| ||||||    
T  22696398 cagagggaatcaaacctgagaccttgagaggagcacactccaagatcccaaatcaaccactaggccaaccc 22696328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 85
Target Start/End: Complemental strand, 28647047 - 28646977
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaaccc 85  Q
    ||||| ||||||||||||||||||   |||||||| ||||||| |||||||  ||| ||||||| ||||||    
T  28647047 cagagggaatcgaacctgagaccttgagagaagcacactccaagatcccaagtcaatcactaggccaaccc 28646977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 65
Target Start/End: Complemental strand, 31273992 - 31273942
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaa 65  Q
    ||||| ||||||||| ||||| |||||||| |||||||||||| |||||||    
T  31273992 cagagggaatcgaacttgagagctctggaggagcaaactccaagatcccaa 31273942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 9718110 - 9718179
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaacc 84  Q
    ||||| ||||||||| |||||| | ||||| |||||||||||| ||| ||  |||||||||||| |||||    
T  9718110 cagagggaatcgaacttgagacttttggaggagcaaactccaatatctcaggccaaccactaggccaacc 9718179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 75
Target Start/End: Complemental strand, 27704073 - 27704020
Alignment:
Q  22 aatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccact 75  Q
    |||||||||||||||||||| || |||||||| ||| ||| ||| |||||||||    
T  27704073 aatcgaacctgagacctctgtaggagcaaacttcaagatctcaagccaaccact 27704020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 37473692 - 37473639
Alignment:
Q  19 gagaatcgaacctgagacctc-tggagaagcaaactccaaaatcccaaaccaac 71  Q
    |||||||||||||||||||||  |||| |||||||||| | |||||||||||||    
T  37473692 gagaatcgaacctgagacctcaaggaggagcaaactcctagatcccaaaccaac 37473639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 94
Target Start/End: Complemental strand, 40332170 - 40332097
Alignment:
Q  22 aatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaac-ccaaatgggtt 94  Q
    ||||||||||||||||| | ||| |||||||||||| ||  ||| |||||||||||  |||| |||||||||||    
T  40332170 aatcgaacctgagacctttagaggagcaaactccaagatttcaagccaaccactagaccaactccaaatgggtt 40332097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 76
Target Start/End: Complemental strand, 42814942 - 42814881
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccacta 76  Q
    ||||| |||||||||||||||| ||  ||| |||||||||||| |||||||  |||||||||    
T  42814942 cagagggaatcgaacctgagacttcaagaggagcaaactccaagatcccaagtcaaccacta 42814881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 2e-22; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 9239049 - 9238967
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggttgc 96  Q
    ||||| |||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||| ||| ||||||||||||||    
T  9239049 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggttgc 9238967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 15 - 85
Target Start/End: Complemental strand, 11448945 - 11448875
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaaccc 85  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||| ||||||    
T  11448945 cagagagaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccc 11448875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 33718581 - 33718661
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaaccc-aaatgggtt 94  Q
    ||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||  |||||| |||||||||    
T  33718581 cagagagaatcgaacctgagatctctggagaagtaaactccaagatcccaaaccaaccactagaccaaccctaaatgggtt 33718661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 12 - 94
Target Start/End: Complemental strand, 11007242 - 11007159
Alignment:
Q  12 gagcagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    |||||||| |||||||||||||||||| ||||| |||||||||||| ||||||| ||||||||||| |||| ||||||||||||    
T  11007242 gagcagagtgaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactagatcaaccccaaatgggtt 11007159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 13753314 - 13753231
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggttgca 97  Q
    |||||||||| ||||||||||||||||||| |||||||||||| |||| || |||||||||||| ||| |||||||||||||||    
T  13753314 cagagagaattgaacctgagacctctggaggagcaaactccaagatccaaagccaaccactaggccaaccccaaatgggttgca 13753231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 15360221 - 15360301
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    ||||| |||||||||||||||||| ||||| |||||||||||| ||||||| |||||||||||| ||| ||||||||||||    
T  15360221 cagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 15360301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 22576141 - 22576061
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    ||||| |||||||| ||||||||||||||| |||||||||||| ||||||| |||||||||||| ||| ||||||||||||    
T  22576141 cagagggaatcgaatctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 22576061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 16 - 94
Target Start/End: Original strand, 5360195 - 5360274
Alignment:
Q  16 agagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaac-ccaaatgggtt 94  Q
    |||| |||||||||||||||||||| |||||||||||||||| ||||||| |||||||| ||| |||| |||||||||||    
T  5360195 agagggaatcgaacctgagacctcttgagaagcaaactccaagatcccaagccaaccaccaggccaactccaaatgggtt 5360274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 9690768 - 9690831
Alignment:
Q  22 aatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaaccc 85  Q
    |||||||||| |||||||||||  |||||||||||||||| |||||||||||||||||||||||    
T  9690768 aatcgaacctaagacctctggaagagcaaactccaaaatctcaaaccaaccactaggtcaaccc 9690831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 16 - 94
Target Start/End: Complemental strand, 12591710 - 12591631
Alignment:
Q  16 agagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    |||| |||||||||||||||||| ||||| |||||||||||| ||||||| |||||||||||| ||| ||||||||||||    
T  12591710 agagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 12591631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 654269 - 654349
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtc-aacccaaatgggtt 94  Q
    ||||| |||||||||||||||||||||||| |||||||||||| |||||||  || |||||||| | ||||||||||||||    
T  654269 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagtcagccactaggccaaacccaaatgggtt 654349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 14212966 - 14212890
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatg 90  Q
    ||||| |||||||||||||||||||||||| |||||||||||| ||||| | ||||||| |||||||| ||||||||    
T  14212966 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccgagccaaccattaggtcaatcccaaatg 14212890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 34147420 - 34147340
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    ||||| |||||||||||||||| ||||||  |||||||||||| ||||||| |||||||||||| ||| ||||||||||||    
T  34147420 cagagggaatcgaacctgagacttctggaagagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 34147340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 34160036 - 34159956
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    ||||| |||||||||||||||| ||||||  |||||||||||| ||||||| |||||||||||| ||| ||||||||||||    
T  34160036 cagagggaatcgaacctgagacttctggaagagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 34159956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 15 - 85
Target Start/End: Complemental strand, 1345009 - 1344941
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaaccc 85  Q
    ||||| |||||||||||||||||||||||| | |||||||||| |||||  ||||||||||||||||||||    
T  1345009 cagagggaatcgaacctgagacctctggaggaacaaactccaagatccc--accaaccactaggtcaaccc 1344941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 16 - 94
Target Start/End: Original strand, 21148634 - 21148713
Alignment:
Q  16 agagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaac-ccaaatgggtt 94  Q
    |||| ||||||||| ||||||||||| | ||||||||||||| ||||||| |||||||||||| |||| |||||||||||    
T  21148634 agagggaatcgaacttgagacctctgaaaaagcaaactccaagatcccaagccaaccactaggccaactccaaatgggtt 21148713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 3222758 - 3222837
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    ||||| ||||||||||||||||||||| || |||||||| ||| ||||||| |||||||||||| ||| ||||||||||||    
T  3222758 cagagggaatcgaacctgagacctctg-aggagcaaactgcaagatcccaagccaaccactaggccaaccccaaatgggtt 3222837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 21982449 - 21982513
Alignment:
Q  21 gaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaaccc 85  Q
    ||||||||||| |||||||||||| |||||||| ||| ||||||| |||||||||||| ||||||    
T  21982449 gaatcgaacctcagacctctggaggagcaaacttcaagatcccaagccaaccactaggccaaccc 21982513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 9844003 - 9843950
Alignment:
Q  24 tcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactag 77  Q
    ||||||||||||||||| ||| |||||||||||| ||||||| |||||||||||    
T  9844003 tcgaacctgagacctctagaggagcaaactccaagatcccaagccaaccactag 9843950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 28672141 - 28672061
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    ||||| ||||||||||| |||||||| ||| |||||||||||| ||| |||  ||||||||||| ||| ||||||||||||    
T  28672141 cagagggaatcgaacctaagacctctagaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 28672061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 28968166 - 28968222
Alignment:
Q  16 agagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaacc 72  Q
    ||||||||||||| ||||||||||| ||| |||||||||||| ||||||| ||||||    
T  28968166 agagagaatcgaatctgagacctctagaggagcaaactccaagatcccaagccaacc 28968222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 9208320 - 9208246
Alignment:
Q  21 gaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    ||||||||||||||||||   ||| |||||||||||| ||||||| |||||||||||  ||| ||||||||||||    
T  9208320 gaatcgaacctgagaccttgagaggagcaaactccaagatcccaatccaaccactagaacaaccccaaatgggtt 9208246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 11840975 - 11840915
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccact 75  Q
    ||||| ||||||| |||||||||||||||| |||||| || || ||||||| |||||||||    
T  11840975 cagagggaatcgagcctgagacctctggaggagcaaattctaatatcccaagccaaccact 11840915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 3907615 - 3907541
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaacccaaat 89  Q
    ||||||||||||||| ||| | ||   ||| |||| || |||| ||||||||||||||||||| |||||||||||    
T  3907615 cagagagaatcgaacttgaaatcttgagaggagcacaccccaagatcccaaaccaaccactagatcaacccaaat 3907541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 17081177 - 17081239
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactag 77  Q
    ||||| ||||| ||| |||||| ||||||| |||||||||||| |||| || |||||||||||    
T  17081177 cagagggaatcaaacttgagacatctggaggagcaaactccaagatcctaagccaaccactag 17081239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 17149579 - 17149637
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaacca 73  Q
    ||||| ||||||||||||||||||   ||| |||| ||||||| |||||||||||||||    
T  17149579 cagagggaatcgaacctgagaccttgagaggagcacactccaagatcccaaaccaacca 17149637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 17706436 - 17706489
Alignment:
Q  21 gaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccac 74  Q
    ||||||||| |||||| ||||||| |||||||||||| |||||||  |||||||    
T  17706436 gaatcgaacttgagacttctggaggagcaaactccaagatcccaagtcaaccac 17706489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 94
Target Start/End: Complemental strand, 33499537 - 33499468
Alignment:
Q  26 gaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    |||||||||||||   ||| |||||||||||| ||||||| |||||||| ||| ||| ||||||||||||    
T  33499537 gaacctgagaccttgagaggagcaaactccaagatcccaagccaaccaccaggccaaccccaaatgggtt 33499468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 2e-22; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 16 - 94
Target Start/End: Original strand, 15566623 - 15566701
Alignment:
Q  16 agagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaacccaaatgggtt 94  Q
    |||| |||||||||||||||||||||||| |||||||||||| ||| ||| |||||||||||| |||||||||||||||    
T  15566623 agagggaatcgaacctgagacctctggaggagcaaactccaagatctcaagccaaccactaggccaacccaaatgggtt 15566701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 45529877 - 45529958
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggttg 95  Q
    ||||| |||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||| ||| |||||||||||||    
T  45529877 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggttg 45529958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 30807276 - 30807356
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    ||||| |||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||| ||| ||||||||||||    
T  30807276 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 30807356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 35492985 - 35492905
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    ||||| |||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||| ||| ||||||||||||    
T  35492985 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 35492905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 40133572 - 40133652
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    ||||| |||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||| ||| ||||||||||||    
T  40133572 cagagggaatcgaacctgagacctttggaggagcaaactccaaaatcccaagccaaccactaggccaaccccaaatgggtt 40133652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 46576422 - 46576342
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    ||||| |||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||| ||| ||||||||||||    
T  46576422 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 46576342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 51532862 - 51532782
Alignment:
Q  16 agagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggttg 95  Q
    |||||||||||||| |||||||| |||||||||||||||||||||| ||||||||| | |||||||| |||||||||||||    
T  51532862 agagagaatcgaacatgagacctttggagaagcaaactccaaaatctcaaaccaactaataggtcaaccccaaatgggttg 51532782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 34492696 - 34492778
Alignment:
Q  13 agcagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    ||||||| ||||||||| |||||||||||||| |||||||||||| ||||||| |||||||||||| ||| ||||||||||||    
T  34492696 agcagagggaatcgaacatgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 34492778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 8456273 - 8456353
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    ||||| |||||||||||||||||||||||| ||||||||| || ||||||| |||||||||||| ||| ||||||||||||    
T  8456273 cagagggaatcgaacctgagacctctggaggagcaaactcgaagatcccaagccaaccactaggccaaccccaaatgggtt 8456353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 21363017 - 21362937
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    ||||| |||||||||||||||||||||||| |||||||||||| |||||||  ||||||||||| ||| ||||||||||||    
T  21363017 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagtcaaccactaggccaaccccaaatgggtt 21362937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 25379829 - 25379765
Alignment:
Q  21 gaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaaccc 85  Q
    |||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||| ||||||    
T  25379829 gaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccc 25379765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 40940899 - 40940819
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    ||||| |||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||  ||| ||||||||||||    
T  40940899 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactagaccaaccccaaatgggtt 40940819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 53424305 - 53424369
Alignment:
Q  21 gaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaaccc 85  Q
    |||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||| ||||||    
T  53424305 gaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccc 53424369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 16 - 94
Target Start/End: Original strand, 25289838 - 25289917
Alignment:
Q  16 agagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    |||| |||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||  ||| ||||||||||||    
T  25289838 agagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactagaccaaccccaaatgggtt 25289917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 15 - 78
Target Start/End: Complemental strand, 26108366 - 26108303
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactagg 78  Q
    ||||| |||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||    
T  26108366 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactagg 26108303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 21 - 95
Target Start/End: Complemental strand, 30257692 - 30257617
Alignment:
Q  21 gaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggttg 95  Q
    |||||||||||||||||| ||||| |||||||||||| ||||||| |||||||||||| ||| |||||||||||||    
T  30257692 gaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggttg 30257617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 15 - 93
Target Start/End: Original strand, 52455772 - 52455851
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggt 93  Q
    ||||| |||||||||||||||||||||||| |||||||||||| ||||| | |||||||||||| ||| |||||||||||    
T  52455772 cagagggaatcgaacctgagacctctggaggagcaaactccaagatccctagccaaccactaggccaaccccaaatgggt 52455851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 53234033 - 53234095
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactag 77  Q
    |||||||||||||||||||||| ||||||| |||||||||||| ||||||| |||||||||||    
T  53234033 cagagagaatcgaacctgagacttctggaggagcaaactccaagatcccaagccaaccactag 53234095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 26174180 - 26174119
Alignment:
Q  22 aatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaac 83  Q
    ||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||| ||||    
T  26174180 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaac 26174119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 22 - 94
Target Start/End: Original strand, 29915399 - 29915472
Alignment:
Q  22 aatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaaccc-aaatgggtt 94  Q
    ||||||||||||||||||||||| |||||||||||| |||||||  |||||| ||||||||||| |||||||||    
T  29915399 aatcgaacctgagacctctggaggagcaaactccaagatcccaagtcaaccattaggtcaaccctaaatgggtt 29915472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 22 - 94
Target Start/End: Original strand, 29964552 - 29964625
Alignment:
Q  22 aatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaaccc-aaatgggtt 94  Q
    ||||||||||||||||||||||| |||||||||||| |||||||  |||||| ||||||||||| |||||||||    
T  29964552 aatcgaacctgagacctctggaggagcaaactccaagatcccaagtcaaccattaggtcaaccctaaatgggtt 29964625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 52821758 - 52821826
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaac 83  Q
    ||||| |||||||||||||||||||||||| |||||||||||| |||||||  ||||||||||| ||||    
T  52821758 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagtcaaccactaggccaac 52821826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 21 - 95
Target Start/End: Complemental strand, 48977456 - 48977381
Alignment:
Q  21 gaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggttg 95  Q
    |||||||||||||||||| ||||| |||||||||||| |||||||  ||||||||||| ||| |||||||||||||    
T  48977456 gaatcgaacctgagacctttggaggagcaaactccaagatcccaagtcaaccactaggccaaccccaaatgggttg 48977381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 16 - 94
Target Start/End: Original strand, 49258386 - 49258465
Alignment:
Q  16 agagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    |||| |||||||||||||||||||||||| |||||||| ||| ||||||| ||||||||||||  || ||||||||||||    
T  49258386 agagggaatcgaacctgagacctctggaggagcaaactgcaagatcccaagccaaccactaggcaaaccccaaatgggtt 49258465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 21 - 95
Target Start/End: Complemental strand, 19857119 - 19857046
Alignment:
Q  21 gaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaacccaaatgggttg 95  Q
    |||||||||||||||| ||||||| |||||||||||| || |||| |||||||| ||| ||||||||||||||||    
T  19857119 gaatcgaacctgagacatctggaggagcaaactccaagat-ccaagccaaccaccaggccaacccaaatgggttg 19857046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 16 - 94
Target Start/End: Complemental strand, 32151497 - 32151419
Alignment:
Q  16 agagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaacccaaatgggtt 94  Q
    |||||||||||||  ||| |||| ||||| |||||||||||| |||||||  ||||||||||| |||||||||||||||    
T  32151497 agagagaatcgaatttgaaacctttggaggagcaaactccaagatcccaagtcaaccactaggccaacccaaatgggtt 32151419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 7485648 - 7485728
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    ||||| |||||||||||||||||| ||||| |||||||||||| |||||||  ||||||||| | ||| ||||||||||||    
T  7485648 cagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagtcaaccactatgccaaccccaaatgggtt 7485728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 9853684 - 9853628
Alignment:
Q  21 gaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactag 77  Q
    |||||||||||||||||| ||||| |||||||||||| ||||||||| |||||||||    
T  9853684 gaatcgaacctgagacctttggaggagcaaactccaagatcccaaactaaccactag 9853628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 31537961 - 31538041
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    ||||| ||||| ||| |||||||||||||| |||||||||||| |||| || |||||||||||| ||| ||||||||||||    
T  31537961 cagagggaatcaaacatgagacctctggaggagcaaactccaagatcctaagccaaccactaggccaaccccaaatgggtt 31538041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 45272539 - 45272619
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    ||||| |||||||| ||||||| ||||||| |||||||||||| ||||||| ||||| |||||| ||| ||||||||||||    
T  45272539 cagagggaatcgaaactgagacatctggaggagcaaactccaagatcccaagccaacgactaggccaaccccaaatgggtt 45272619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 19 - 85
Target Start/End: Complemental strand, 36660840 - 36660774
Alignment:
Q  19 gagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaaccc 85  Q
    |||||| |||||||||||||   ||| |||||||||||| |||| ||||||||||||||||||||||    
T  36660840 gagaattgaacctgagaccttgagaggagcaaactccaagatcctaaaccaaccactaggtcaaccc 36660774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 15 - 65
Target Start/End: Original strand, 39041975 - 39042025
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaa 65  Q
    ||||||||||||||| |||||||||||||| |||||||||||| |||||||    
T  39041975 cagagagaatcgaacttgagacctctggaggagcaaactccaagatcccaa 39042025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 22 - 95
Target Start/End: Complemental strand, 50583059 - 50582985
Alignment:
Q  22 aatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggttg 95  Q
    |||||||||||| ||||   ||| |||||||||||| |||||||||||||||||||| ||| |||||||||||||    
T  50583059 aatcgaacctgaaaccttaagaggagcaaactccaagatcccaaaccaaccactaggccaaccccaaatgggttg 50582985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 18177010 - 18177091
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggttg 95  Q
    ||||| ||||||||||||| |||||||||  |||||||||||| ||| |||  ||||||||||| ||| |||||||||||||    
T  18177010 cagagggaatcgaacctgatacctctggaagagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggttg 18177091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 53288835 - 53288908
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaacccaaa 88  Q
    ||||| ||||||| |||||||||| ||||| ||||||||| || ||||||||||||||||| || |||| ||||    
T  53288835 cagagggaatcgagcctgagacctttggaggagcaaactctaatatcccaaaccaaccacttggccaacgcaaa 53288908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 16 - 94
Target Start/End: Original strand, 7470339 - 7470418
Alignment:
Q  16 agagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    |||| |||||||||||||||||| ||||| |||||||||||| ||| |||  |||||||||||  || ||||||||||||    
T  7470339 agagggaatcgaacctgagacctttggaggagcaaactccaagatctcaagtcaaccactaggcaaaccccaaatgggtt 7470418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 32 - 94
Target Start/End: Complemental strand, 9842978 - 9842915
Alignment:
Q  32 gagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    ||||||||||||| || ||||||||| |||||||||||||||||||  ||| ||||||||||||    
T  9842978 gagacctctggaggagaaaactccaagatcccaaaccaaccactagaccaaccccaaatgggtt 9842915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 1692902 - 1692866
Alignment:
Q  21 gaatcgaacctgagacctctggagaagcaaactccaa 57  Q
    |||||||||||||||||||||||| ||||||||||||    
T  1692902 gaatcgaacctgagacctctggaggagcaaactccaa 1692866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 10083943 - 10083999
Alignment:
Q  16 agagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaacc 72  Q
    |||| ||||| |||||||| ||||||||| |||||||||||| ||||||| ||||||    
T  10083943 agagggaatcaaacctgagccctctggaggagcaaactccaagatcccaagccaacc 10083999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 10190866 - 10190922
Alignment:
Q  16 agagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaacc 72  Q
    |||| ||||| |||||||| ||||||||| |||||||||||| ||||||| ||||||    
T  10190866 agagggaatcaaacctgagccctctggaggagcaaactccaagatcccaagccaacc 10190922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 25344186 - 25344250
Alignment:
Q  21 gaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaaccc 85  Q
    ||||| ||||||||| |||||||| ||||||||| || |||||||  ||||||||||| ||||||    
T  25344186 gaatcaaacctgagatctctggaggagcaaactcgaagatcccaagtcaaccactaggccaaccc 25344250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 38733040 - 38732960
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaacc-caaatgggtt 94  Q
    |||||||||||| ||||||||||||||||| | |||||||||| || ||||  |||||| |||  ||||| ||||||||||    
T  38733040 cagagagaatcggacctgagacctctggaggaacaaactccaagattccaagtcaaccattagcccaacctcaaatgggtt 38732960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 49167130 - 49167070
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccact 75  Q
    ||||||||||||||||||| | || ||||| |||||||||||| ||| ||| |||||||||    
T  49167130 cagagagaatcgaacctgatatctttggaggagcaaactccaagatctcaagccaaccact 49167070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 55287877 - 55287797
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    ||||| ||||||||||||| ||||||| || ||||||||| || || |||| |||||||||| | ||| ||||||||||||    
T  55287877 cagagggaatcgaacctgaaacctctgaaggagcaaactctaagattccaagccaaccactatgccaaccccaaatgggtt 55287797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 73
Target Start/End: Original strand, 14343418 - 14343469
Alignment:
Q  22 aatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaacca 73  Q
    ||||||| ||||||| ||||||| |||||||||||| ||| |||||||||||    
T  14343418 aatcgaatctgagacatctggaggagcaaactccaagatctcaaaccaacca 14343469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 84
Target Start/End: Original strand, 55371414 - 55371477
Alignment:
Q  21 gaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaacc 84  Q
    ||||||||| ||||||||   |||||||| ||||||||||| ||| |||||||||||| |||||    
T  55371414 gaatcgaacatgagaccttgagagaagcatactccaaaatcgcaagccaaccactaggccaacc 55371477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 85
Target Start/End: Complemental strand, 4462707 - 4462637
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaaccc 85  Q
    ||||| ||||||||| |||||| | || || |||||||||||| ||| ||| |||||||||||| ||||||    
T  4462707 cagagggaatcgaacatgagacttttgaagtagcaaactccaagatctcaagccaaccactaggccaaccc 4462637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 2e-22; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 30466951 - 30467033
Alignment:
Q  13 agcagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    |||||||||||||||||||||||||||| ||| | |||||||||| |||||||||||||||||||| ||| ||||||||||||    
T  30466951 agcagagagaatcgaacctgagacctctagaggaacaaactccaatatcccaaaccaaccactaggccaaccccaaatgggtt 30467033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 41314066 - 41313986
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    ||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||| | ||| ||||||||||||    
T  41314066 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaaaccaaccactacggcaaccccaaatgggtt 41313986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 18976548 - 18976631
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggttgca 97  Q
    ||||| ||||||||| |||||||||||||| |||||||||||| ||||||| |||||||||||| ||| |||||||||||||||    
T  18976548 cagagggaatcgaacatgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggttgca 18976631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 15 - 85
Target Start/End: Complemental strand, 17324840 - 17324770
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaaccc 85  Q
    ||||| |||||||||||||||||||||||| |||||||||||| || ||||||||||||||||| ||||||    
T  17324840 cagagggaatcgaacctgagacctctggaggagcaaactccaagataccaaaccaaccactaggccaaccc 17324770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 33827696 - 33827776
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    ||||| |||||||||||||||||||||||| ||||| |||||| ||||||| |||||||||||| ||| ||||||||||||    
T  33827696 cagagggaatcgaacctgagacctctggaggagcaatctccaagatcccaagccaaccactaggccaaccccaaatgggtt 33827776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 44946182 - 44946256
Alignment:
Q  21 gaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    |||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||  ||| ||||||||||||    
T  44946182 gaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactagaccaaccccaaatgggtt 44946256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 85
Target Start/End: Original strand, 44976277 - 44976347
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaaccc 85  Q
    ||||| |||||||||||||||||||||||| ||||||| |||| ||||||| |||||||||||| ||||||    
T  44976277 cagagggaatcgaacctgagacctctggaggagcaaaccccaagatcccaagccaaccactaggccaaccc 44976347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 15 - 76
Target Start/End: Original strand, 10582113 - 10582174
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccacta 76  Q
    ||||| |||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||    
T  10582113 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccacta 10582174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 27290656 - 27290599
Alignment:
Q  21 gaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactagg 78  Q
    |||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||    
T  27290656 gaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactagg 27290599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 24196078 - 24195998
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    ||||| ||||||||||||| |||||||||| ||| ||| |||||||||||| |||||||||||| ||| ||||||||||||    
T  24196078 cagagggaatcgaacctgaaacctctggaggagcgaaccccaaaatcccaagccaaccactaggccaaccccaaatgggtt 24195998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 15 - 85
Target Start/End: Complemental strand, 4852632 - 4852562
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaaccc 85  Q
    ||||| |||||||||||||||||| ||||| |||||||||||| || ||||  ||||||||||||||||||    
T  4852632 cagagggaatcgaacctgagacctttggaggagcaaactccaagattccaagtcaaccactaggtcaaccc 4852562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 11941339 - 11941413
Alignment:
Q  21 gaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    |||| ||||||||||||||||||| |||||||||||| ||||||| |||||||||||  ||| ||||||||||||    
T  11941339 gaattgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactagaccaaccccaaatgggtt 11941413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 22 - 94
Target Start/End: Original strand, 36390698 - 36390769
Alignment:
Q  22 aatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    ||||||||||||||||| |||||||||||||||  | |||||||||||||||||||| ||| ||||||||||||    
T  36390698 aatcgaacctgagacctttggagaagcaaactc--agatcccaaaccaaccactaggccaaccccaaatgggtt 36390769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 25293240 - 25293159
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaacc-caaatgggttg 95  Q
    ||||| |||||||||||||||||||| ||| |||||||||||| |||||||  ||||||||||  ||||| |||||||||||    
T  25293240 cagagggaatcgaacctgagacctctcgaggagcaaactccaagatcccaagtcaaccactagaccaacctcaaatgggttg 25293159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 6714410 - 6714484
Alignment:
Q  21 gaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    ||||| |||||||||||||||||| |||||||||||| ||| ||| ||||||| |||| ||| ||||||||||||    
T  6714410 gaatcaaacctgagacctctggaggagcaaactccaagatctcaagccaaccattaggccaatcccaaatgggtt 6714484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 15 - 85
Target Start/End: Complemental strand, 8258971 - 8258901
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaaccc 85  Q
    ||||| |||||||||||||||| ||||||| |||||||||||| ||| ||||| ||||| || ||||||||    
T  8258971 cagagggaatcgaacctgagacatctggaggagcaaactccaagatctcaaactaaccattatgtcaaccc 8258901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 15038027 - 15037953
Alignment:
Q  21 gaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    |||||||||||||||||| ||||| |||||||||||| ||||| |  ||||||||||| ||| ||||||||||||    
T  15038027 gaatcgaacctgagacctttggaggagcaaactccaagatcccgagtcaaccactaggccaaccccaaatgggtt 15037953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 43374448 - 43374505
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaacc 72  Q
    ||||| ||||||||||||||||||||| || |||||||||||| ||||||| ||||||    
T  43374448 cagagggaatcgaacctgagacctctgaaggagcaaactccaagatcccaagccaacc 43374505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 34516537 - 34516589
Alignment:
Q  21 gaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaacca 73  Q
    ||||||||||||| |||||||||| |||||||||||| ||||||| |||||||    
T  34516537 gaatcgaacctgaaacctctggaggagcaaactccaagatcccaagccaacca 34516589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 15 - 93
Target Start/End: Original strand, 8192474 - 8192553
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggt 93  Q
    ||||| ||||||||||||||||||   ||| |||| ||||||| ||||||| |||||||||||| ||| |||||||||||    
T  8192474 cagagggaatcgaacctgagaccttgagaggagcacactccaagatcccaagccaaccactaggccaaccccaaatgggt 8192553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 16 - 95
Target Start/End: Original strand, 19605969 - 19606048
Alignment:
Q  16 agagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaacccaaatgggttg 95  Q
    |||| ||||||||||||||||||   ||| |||  ||||||| ||||||| |||||||||||| ||||||| ||||||||    
T  19605969 agagggaatcgaacctgagaccttgagaggagcgcactccaagatcccaagccaaccactagggcaacccagatgggttg 19606048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 15 - 78
Target Start/End: Original strand, 23787131 - 23787194
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactagg 78  Q
    ||||| ||||| |||||||||||| || ||||||||| ||||||||  ||||||||||||||||    
T  23787131 cagagggaatcaaacctgagacctttgtagaagcaaattccaaaatttcaaaccaaccactagg 23787194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 35171874 - 35171832
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaa 57  Q
    ||||| |||||||||||||||||||||||| ||||||||||||    
T  35171874 cagagggaatcgaacctgagacctctggaggagcaaactccaa 35171832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 5394091 - 5394034
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaacc 72  Q
    ||||| |||||||||||||||||| ||||| |||||||||||| ||| ||| ||||||    
T  5394091 cagagggaatcgaacctgagacctttggaggagcaaactccaagatctcaagccaacc 5394034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 32845165 - 32845084
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggttg 95  Q
    ||||| ||||||||||||| || | ||||| |||||||||||| ||||||| | ||| |||||| ||| |||||||||||||    
T  32845165 cagagggaatcgaacctgaaacttttggaggagcaaactccaagatcccaagctaactactaggccaaccccaaatgggttg 32845084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 36242435 - 36242492
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaacc 72  Q
    ||||| |||||||||||||||||||||||| |||||| | ||| ||||||| ||||||    
T  36242435 cagagggaatcgaacctgagacctctggaggagcaaatttcaagatcccaagccaacc 36242492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 45271458 - 45271401
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaacc 72  Q
    ||||| ||||||||| ||| |||||||||||||||||||| || ||||||| ||||||    
T  45271458 cagagggaatcgaacatgaaacctctggagaagcaaactctaagatcccaagccaacc 45271401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 85
Target Start/End: Original strand, 918833 - 918892
Alignment:
Q  25 cgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaaccc 85  Q
    ||||| ||||||||| | || |||||||| ||||||||||| |||||||||||||||||||    
T  918833 cgaacttgagacctcag-aggagcaaacttcaaaatcccaagccaaccactaggtcaaccc 918892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 1191586 - 1191530
Alignment:
Q  16 agagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaacc 72  Q
    |||| ||| |||||||||||||||||||| |||||||||||| ||| ||| ||||||    
T  1191586 agagggaaacgaacctgagacctctggaggagcaaactccaagatctcaagccaacc 1191530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 4567567 - 4567630
Alignment:
Q  22 aatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaaccc 85  Q
    ||||||||||||||| |||| || |||||||| ||| ||||||| ||||| |||||| ||||||    
T  4567567 aatcgaacctgagacttctgaaggagcaaacttcaagatcccaagccaactactaggccaaccc 4567630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 21 - 75
Target Start/End: Complemental strand, 19849901 - 19849847
Alignment:
Q  21 gaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccact 75  Q
    ||||||||| | |||||| ||||| |||||||||||| ||| |||||||||||||    
T  19849901 gaatcgaacttaagacctttggaggagcaaactccaagatctcaaaccaaccact 19849847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 32526214 - 32526288
Alignment:
Q  21 gaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaac-ccaaatgggtt 94  Q
    ||||||||||||||||||   ||| |||||||| ||| |||||||| ||||||||| | |||| |||||||||||    
T  32526214 gaatcgaacctgagaccttgagaggagcaaacttcaagatcccaaatcaaccactaagccaactccaaatgggtt 32526288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 40997479 - 40997535
Alignment:
Q  21 gaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactag 77  Q
    |||| |||| |||||||| ||||| |||||||||||| |||||||  ||||||||||    
T  40997479 gaattgaacatgagacctttggaggagcaaactccaagatcccaagtcaaccactag 40997535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 9e-22; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 18532179 - 18532102
Alignment:
Q  21 gaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggttgca 97  Q
    |||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||| ||| |||||||||||||||    
T  18532179 gaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggttgca 18532102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 34237778 - 34237858
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    ||||| |||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||| ||| ||||||||||||    
T  34237778 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 34237858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 15 - 85
Target Start/End: Complemental strand, 28193552 - 28193482
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaaccc 85  Q
    ||||| |||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||| ||||||    
T  28193552 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccc 28193482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 3734746 - 3734826
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    ||||| |||||||||||||||||| ||||| |||||||||||| ||||||| |||||||||||| ||| ||||||||||||    
T  3734746 cagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 3734826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 15 - 91
Target Start/End: Original strand, 4698846 - 4698922
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaacccaaatgg 91  Q
    ||||| ||||||||||||||||||||| || |||||||||||| |||||||||||||| || || ||||||||||||    
T  4698846 cagagggaatcgaacctgagacctctgaaggagcaaactccaagatcccaaaccaaccgctgggccaacccaaatgg 4698922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 4718723 - 4718643
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    ||||| ||||||||||||||||||||| || |||||||||||| ||||||| |||||||||||| ||| ||||||||||||    
T  4718723 cagagggaatcgaacctgagacctctgaaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 4718643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 27746464 - 27746528
Alignment:
Q  21 gaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaaccc 85  Q
    |||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||| ||||||    
T  27746464 gaatcgaacctgagacctttggaggagcaaactccaagatcccaaaccaaccactaggccaaccc 27746528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 39349334 - 39349254
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    ||||| |||||||||||||||||||||||| |||||||||||| ||||||| ||||||||| || ||| ||||||||||||    
T  39349334 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactgggccaaccccaaatgggtt 39349254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 15 - 93
Target Start/End: Complemental strand, 19471687 - 19471608
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggt 93  Q
    ||||| ||||| |||||||||||||||||| |||||||||||| ||||||| |||||||||||| ||| |||||||||||    
T  19471687 cagagggaatcaaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggt 19471608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 15 - 93
Target Start/End: Complemental strand, 19542611 - 19542532
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggt 93  Q
    ||||| ||||| |||||||||||||||||| |||||||||||| ||||||| |||||||||||| ||| |||||||||||    
T  19542611 cagagggaatcaaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggt 19542532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 15 - 93
Target Start/End: Original strand, 19590085 - 19590164
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggt 93  Q
    ||||| ||||| |||||||||||||||||| |||||||||||| ||||||| |||||||||||| ||| |||||||||||    
T  19590085 cagagggaatcaaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggt 19590164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 15259529 - 15259591
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactag 77  Q
    ||||| |||||||||||||||||||||||| |||||| ||||| |||||||||||||||||||    
T  15259529 cagagggaatcgaacctgagacctctggaggagcaaaatccaagatcccaaaccaaccactag 15259591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 2618264 - 2618183
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggttg 95  Q
    ||||| ||||||||||  |||||||||||| |||||||||||| ||||||| |||||||||||| ||| |||||||||||||    
T  2618264 cagagggaatcgaacccaagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggttg 2618183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 16 - 94
Target Start/End: Original strand, 42643242 - 42643321
Alignment:
Q  16 agagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    |||| |||||||| ||||||||||||||| |||||||||||| |||||||  ||||||||||| ||| ||||||||||||    
T  42643242 agagggaatcgaatctgagacctctggaggagcaaactccaagatcccaagtcaaccactaggccaaccccaaatgggtt 42643321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 2166771 - 2166721
Alignment:
Q  21 gaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaac 71  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  2166771 gaatcgaacctgagacctttggagaagcaaactccaagatcccaaaccaac 2166721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 14633032 - 14632975
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaacc 72  Q
    ||||| |||||||||||||||||||||||| |||||||||||| ||||||| ||||||    
T  14633032 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaacc 14632975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 21603302 - 21603245
Alignment:
Q  21 gaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactagg 78  Q
    |||||||||||||||||||||||| ||||||||| || ||||||| ||||||||||||    
T  21603302 gaatcgaacctgagacctctggaggagcaaactctaagatcccaagccaaccactagg 21603245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 264523 - 264590
Alignment:
Q  16 agagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaac 83  Q
    |||| ||||||||||||||| |||||||| ||||||||| || ||||||| |||||||||||| ||||    
T  264523 agagggaatcgaacctgagatctctggaggagcaaactcgaagatcccaagccaaccactaggccaac 264590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 651398 - 651331
Alignment:
Q  16 agagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaac 83  Q
    |||| ||||||||||||||| |||||||| ||||||||| || ||||||| |||||||||||| ||||    
T  651398 agagggaatcgaacctgagatctctggaggagcaaactcgaagatcccaagccaaccactaggccaac 651331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 837133 - 837066
Alignment:
Q  16 agagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaac 83  Q
    |||| ||||||||||||||| |||||||| ||||||||| || ||||||| |||||||||||| ||||    
T  837133 agagggaatcgaacctgagatctctggaggagcaaactcgaagatcccaagccaaccactaggccaac 837066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 23 - 85
Target Start/End: Complemental strand, 8042724 - 8042662
Alignment:
Q  23 atcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaaccc 85  Q
    |||||||||||||| | ||||| |||||||||||| ||||||| |||| ||||||||||||||    
T  8042724 atcgaacctgagacttttggaggagcaaactccaagatcccaagccaagcactaggtcaaccc 8042662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 20305980 - 20305906
Alignment:
Q  21 gaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    |||||||| ||||||||| ||||| ||||||||| || ||||||| |||||||||||| ||| ||||||||||||    
T  20305980 gaatcgaaactgagacctttggaggagcaaactctaagatcccaagccaaccactaggccaaccccaaatgggtt 20305906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 20469994 - 20469940
Alignment:
Q  16 agagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaa 70  Q
    |||| |||||||||||||||||||||||| |||||||||||| ||||||| ||||    
T  20469994 agagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaa 20469940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 21092613 - 21092539
Alignment:
Q  21 gaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    |||||||| ||||||||| ||||| ||||||||| || ||||||| |||||||||||| ||| ||||||||||||    
T  21092613 gaatcgaaactgagacctttggaggagcaaactctaagatcccaagccaaccactaggccaaccccaaatgggtt 21092539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 32879357 - 32879277
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    ||||| |||||||||||||||||||||||| | ||||||| || |||||||  ||||||||||  ||| ||||||||||||    
T  32879357 cagagggaatcgaacctgagacctctggaggaccaaactcgaagatcccaagtcaaccactagaccaaccccaaatgggtt 32879277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 24018453 - 24018390
Alignment:
Q  22 aatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaaccc 85  Q
    |||||||||| |||||| ||||| |||||||||||| |||||||  |||||||||| |||||||    
T  24018453 aatcgaacctcagacctttggaggagcaaactccaagatcccaagtcaaccactagatcaaccc 24018390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 15 - 93
Target Start/End: Complemental strand, 42328082 - 42328004
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggt 93  Q
    ||||| ||||| ||||||| |||||||||| || ||||||||| ||||||| |||||||||||| ||| |||||||||||    
T  42328082 cagagggaatcaaacctgacacctctggaggag-aaactccaagatcccaagccaaccactaggccaaccccaaatgggt 42328004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 95
Target Start/End: Original strand, 7558073 - 7558147
Alignment:
Q  22 aatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggttg 95  Q
    ||||||| ||||||| ||||||| |||||||||||| ||||||| | ||| |||||| ||| |||||||||||||    
T  7558073 aatcgaatctgagacttctggaggagcaaactccaagatcccaagctaactactaggccaaccccaaatgggttg 7558147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 87
Target Start/End: Original strand, 8765649 - 8765721
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaacccaa 87  Q
    ||||| ||||||||||||||| |||||| | |||||||||||| ||| ||| |||| || ||| |||||||||    
T  8765649 cagagggaatcgaacctgagatctctgggggagcaaactccaagatctcaagccaatcattagctcaacccaa 8765721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 11714948 - 11715010
Alignment:
Q  21 gaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaac 83  Q
    ||||||||||||| | ||   |||||||||||||||| ||| |||||||||||||||| ||||    
T  11714948 gaatcgaacctgaaatcttgagagaagcaaactccaagatctcaaaccaaccactaggccaac 11715010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 22200684 - 22200742
Alignment:
Q  16 agagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccac 74  Q
    |||| |||||||||||||||| |   |||||| ||||||||| ||||||||||||||||    
T  22200684 agagggaatcgaacctgagactttgagagaagtaaactccaagatcccaaaccaaccac 22200742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 26168977 - 26169051
Alignment:
Q  21 gaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaaccc-aaatgggtt 94  Q
    ||||| ||||||||||||   ||| |||||||||||| ||||||| | |||||||||| |||||| |||||||||    
T  26168977 gaatcaaacctgagaccttgagaggagcaaactccaagatcccaagcaaaccactaggccaaccctaaatgggtt 26169051  T

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Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 28088358 - 28088294
Alignment:
Q  21 gaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaaccc 85  Q
    |||||||| ||||||||||||||  | |||||||||| |||||||  ||||||||| | ||||||    
T  28088358 gaatcgaatctgagacctctggatgaacaaactccaagatcccaagtcaaccactaagccaaccc 28088294  T

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Target: scaffold0199 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 8530 - 8610
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    |||||| ||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||| ||| ||||||||||||    
T  8530 cagagataatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 8610  T

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Target: scaffold0623 (Bit Score: 51; Significance: 6e-20; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 15 - 85
Target Start/End: Original strand, 1179 - 1249
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaaccc 85  Q
    ||||| |||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||| ||||||    
T  1179 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccc 1249  T

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Target: scaffold0366 (Bit Score: 51; Significance: 6e-20; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 15 - 85
Target Start/End: Original strand, 9422 - 9492
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaaccc 85  Q
    ||||| |||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||| ||||||    
T  9422 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccc 9492  T

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Target: scaffold0366; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 12130 - 12193
Alignment:
Q  22 aatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaaccc 85  Q
    ||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||| ||||||    
T  12130 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccc 12193  T

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Target: scaffold0576 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 5205 - 5285
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    ||||| |||||||||||||||||| ||||| |||||||||||| ||||||| |||||||||||| ||| ||||||||||||    
T  5205 cagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 5285  T

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Target: scaffold0459 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 10823 - 10886
Alignment:
Q  22 aatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaaccc 85  Q
    ||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||| ||||||    
T  10823 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccc 10886  T

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Target: scaffold0068 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 16 - 94
Target Start/End: Original strand, 41768 - 41847
Alignment:
Q  16 agagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    |||| |||||||||||||||||||||||| |||||||||||| |||||||  ||||||||||| ||| ||||||||||||    
T  41768 agagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagtcaaccactaggccaaccccaaatgggtt 41847  T

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Target: scaffold0328 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 15065 - 14985
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    ||||| |||| ||||||||||||||||||| |||||||||||| ||||||  |||||||||||| ||| ||||||||||||    
T  15065 cagagggaattgaacctgagacctctggaggagcaaactccaagatcccaggccaaccactaggccaaccccaaatgggtt 14985  T

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Target: scaffold0070 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 40399 - 40319
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    ||||| ||||||||||||||||||||| || |||||||||||| |||| || |||||||||||| ||| ||||||||||||    
T  40399 cagagggaatcgaacctgagacctctgaaggagcaaactccaagatcctaagccaaccactaggccaaccccaaatgggtt 40319  T

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Target: scaffold0026 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 97489 - 97569
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    ||||| |||||||||||||||||| ||||| |||||||| ||| ||||||| |||||||||||| ||| ||||||||||||    
T  97489 cagagggaatcgaacctgagacctttggaggagcaaactacaagatcccaagccaaccactaggccaaccccaaatgggtt 97569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 15 - 93
Target Start/End: Original strand, 52994 - 53073
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggt 93  Q
    ||||| |||||||||||||  ||||||||| |||||||||||| ||||||| |||||||||||| ||| |||||||||||    
T  52994 cagagggaatcgaacctgaagcctctggaggagcaaactccaagatcccaagccaaccactaggccaatcccaaatgggt 53073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 82 - 150
Alignment:
Q  16 agagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaacc 84  Q
    |||| |||||||||||||||||||||||  |||||||||||| ||| ||| |||||||||||| |||||    
T  82 agagggaatcgaacctgagacctctggacgagcaaactccaagatcacaagccaaccactaggccaacc 150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 7438 - 7502
Alignment:
Q  21 gaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaaccc 85  Q
    ||||||||||||||| |||||||| |||||||||||| ||||||| ||||| |||||| ||||||    
T  7438 gaatcgaacctgagatctctggaggagcaaactccaagatcccaagccaactactaggccaaccc 7502  T

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Target: scaffold0028 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 21 - 95
Target Start/End: Complemental strand, 27844 - 27769
Alignment:
Q  21 gaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggttg 95  Q
    |||||||||| |||||||   ||| ||||||||||||||||||||||||||||||||  ||| |||||||||||||    
T  27844 gaatcgaacccgagaccttgagaggagcaaactccaaaatcccaaaccaaccactagaccaaccccaaatgggttg 27769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 161883 - 161828
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaa 70  Q
    ||||| |||||||||||||||||||||||| |||||||||||| ||||||| ||||    
T  161883 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaa 161828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 66830 - 66756
Alignment:
Q  21 gaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    ||||||||| |||||||| ||||| |||||||||||| ||||||| |||||||||||  ||| ||||||||||||    
T  66830 gaatcgaacgtgagacctttggaggagcaaactccaagatcccaagccaaccactagaccaatcccaaatgggtt 66756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 15 - 76
Target Start/End: Original strand, 8302 - 8363
Alignment:
Q  15 cagagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccacta 76  Q
    ||||| ||||||||| |||||||||||||| |||||||||||| ||||| | ||||||||||    
T  8302 cagagggaatcgaacttgagacctctggaggagcaaactccaagatcccgagccaaccacta 8363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 16 - 94
Target Start/End: Original strand, 26667 - 26746
Alignment:
Q  16 agagagaatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    |||||||||| ||| |||||||||| || ||||||||||||| |||| || ||||||| |||| ||| ||||||||||||    
T  26667 agagagaatcaaacatgagacctcttgaaaagcaaactccaagatcctaagccaaccagtaggccaaccccaaatgggtt 26746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 22 - 94
Target Start/End: Original strand, 12884 - 12957
Alignment:
Q  22 aatcgaacctgagacctctggagaagcaaactccaaaatcccaaaccaaccactaggtcaa-cccaaatgggtt 94  Q
    |||||||||||||| |||||||| ||| |||||||| |||||||  ||||||||||| ||| ||||||| ||||    
T  12884 aatcgaacctgagatctctggaggagcgaactccaagatcccaagtcaaccactaggccaatcccaaataggtt 12957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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