View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17422_low_38 (Length: 236)

Name: NF17422_low_38
Description: NF17422
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17422_low_38
NF17422_low_38
[»] chr6 (61 HSPs)
chr6 (20-216)||(32298476-32298679)
chr6 (140-214)||(7265589-7265663)
chr6 (125-218)||(19040337-19040430)
chr6 (140-214)||(5732506-5732580)
chr6 (144-214)||(9027167-9027237)
chr6 (108-202)||(32511630-32511724)
chr6 (97-216)||(7977783-7977902)
chr6 (107-214)||(9658868-9658975)
chr6 (144-206)||(7151409-7151471)
chr6 (144-214)||(34073347-34073417)
chr6 (125-205)||(31579208-31579286)
chr6 (134-202)||(7377980-7378048)
chr6 (144-216)||(10294094-10294166)
chr6 (146-197)||(7086801-7086852)
chr6 (123-214)||(17841568-17841659)
chr6 (97-212)||(33001242-33001357)
chr6 (144-214)||(7996378-7996448)
chr6 (144-214)||(8022353-8022423)
chr6 (144-202)||(9025494-9025552)
chr6 (144-202)||(10888974-10889032)
chr6 (140-202)||(21924931-21924993)
chr6 (143-212)||(9629374-9629443)
chr6 (152-205)||(30866152-30866205)
chr6 (140-217)||(34172179-34172256)
chr6 (144-196)||(9195754-9195806)
chr6 (152-211)||(10842524-10842583)
chr6 (107-182)||(12690437-12690512)
chr6 (144-211)||(21395308-21395374)
chr6 (140-214)||(7938105-7938179)
chr6 (114-212)||(13364675-13364773)
chr6 (145-214)||(19044453-19044522)
chr6 (144-200)||(9617437-9617493)
chr6 (144-212)||(20371110-20371178)
chr6 (142-214)||(21424800-21424872)
chr6 (140-200)||(24614413-24614473)
chr6 (135-214)||(8776964-8777043)
chr6 (158-197)||(8805586-8805625)
chr6 (152-211)||(26562681-26562740)
chr6 (107-202)||(28715296-28715391)
chr6 (144-214)||(677826-677896)
chr6 (144-214)||(10770674-10770744)
chr6 (140-202)||(13360368-13360430)
chr6 (146-204)||(13689494-13689552)
chr6 (152-202)||(13851737-13851787)
chr6 (144-214)||(16766686-16766756)
chr6 (152-214)||(17341672-17341734)
chr6 (152-198)||(24832593-24832639)
chr6 (146-196)||(26178683-26178733)
chr6 (108-214)||(28152088-28152193)
chr6 (108-178)||(32978863-32978933)
chr6 (153-202)||(1532241-1532290)
chr6 (140-177)||(4864089-4864126)
chr6 (145-202)||(5462687-5462744)
chr6 (148-205)||(7569172-7569229)
chr6 (152-220)||(10339133-10339202)
chr6 (135-196)||(34595141-34595202)
chr6 (144-180)||(7027265-7027301)
chr6 (152-196)||(17302354-17302398)
chr6 (143-203)||(20518345-20518405)
chr6 (158-214)||(34290091-34290147)
chr6 (160-212)||(34447374-34447426)
[»] chr4 (42 HSPs)
chr4 (108-214)||(21945492-21945598)
chr4 (108-202)||(8423682-8423776)
chr4 (108-196)||(35157949-35158037)
chr4 (146-214)||(36635313-36635381)
chr4 (143-202)||(15029766-15029825)
chr4 (140-206)||(16189706-16189772)
chr4 (121-195)||(48139272-48139346)
chr4 (144-205)||(15659760-15659821)
chr4 (108-212)||(23292950-23293054)
chr4 (140-204)||(33950135-33950199)
chr4 (108-180)||(40179600-40179672)
chr4 (152-212)||(40613441-40613501)
chr4 (138-189)||(42014972-42015024)
chr4 (145-204)||(7214523-7214582)
chr4 (108-195)||(12895238-12895325)
chr4 (122-205)||(29205442-29205525)
chr4 (145-195)||(5775359-5775409)
chr4 (111-212)||(49431016-49431118)
chr4 (153-202)||(22440609-22440658)
chr4 (135-196)||(54580014-54580075)
chr4 (145-193)||(18576038-18576086)
chr4 (154-201)||(903924-903971)
chr4 (87-180)||(4157459-4157553)
chr4 (141-180)||(10499267-10499306)
chr4 (152-214)||(35723392-35723455)
chr4 (144-195)||(40783965-40784016)
chr4 (152-198)||(999356-999402)
chr4 (140-202)||(2361971-2362033)
chr4 (122-180)||(4157172-4157230)
chr4 (108-194)||(9996849-9996935)
chr4 (152-202)||(13134451-13134501)
chr4 (144-202)||(13783282-13783340)
chr4 (156-214)||(21539879-21539937)
chr4 (152-209)||(11931274-11931331)
chr4 (108-197)||(28964212-28964301)
chr4 (129-194)||(30103342-30103406)
chr4 (149-202)||(30522920-30522973)
chr4 (144-201)||(30982878-30982935)
chr4 (138-195)||(36386205-36386262)
chr4 (156-216)||(3731190-3731250)
chr4 (156-216)||(5527174-5527234)
chr4 (144-180)||(46083991-46084027)
[»] chr1 (67 HSPs)
chr1 (144-214)||(6427339-6427409)
chr1 (140-211)||(14332638-14332709)
chr1 (140-214)||(9709809-9709883)
chr1 (123-214)||(36878450-36878541)
chr1 (96-214)||(8842666-8842784)
chr1 (108-202)||(38078625-38078719)
chr1 (140-202)||(39953142-39953204)
chr1 (108-202)||(40181872-40181966)
chr1 (128-214)||(2896105-2896191)
chr1 (108-202)||(5898230-5898324)
chr1 (140-202)||(13436459-13436521)
chr1 (108-202)||(22515851-22515945)
chr1 (140-202)||(41877466-41877528)
chr1 (114-211)||(21530681-21530778)
chr1 (149-214)||(36905986-36906051)
chr1 (123-203)||(28674800-28674880)
chr1 (122-214)||(46348361-46348453)
chr1 (140-195)||(1864876-1864931)
chr1 (135-214)||(22881607-22881686)
chr1 (152-211)||(25098563-25098622)
chr1 (145-200)||(27471567-27471622)
chr1 (108-195)||(40258897-40258984)
chr1 (144-199)||(44482234-44482289)
chr1 (152-214)||(398773-398835)
chr1 (128-214)||(5927324-5927410)
chr1 (146-220)||(10572591-10572665)
chr1 (146-196)||(12713329-12713379)
chr1 (146-196)||(12717420-12717470)
chr1 (108-214)||(13997872-13997978)
chr1 (152-214)||(17831539-17831601)
chr1 (144-202)||(20157350-20157408)
chr1 (144-202)||(34371715-34371772)
chr1 (152-205)||(10233251-10233304)
chr1 (145-214)||(19562622-19562691)
chr1 (158-211)||(25452162-25452215)
chr1 (138-202)||(29229462-29229527)
chr1 (152-197)||(34712391-34712436)
chr1 (87-202)||(38075911-38076028)
chr1 (145-202)||(38503321-38503378)
chr1 (144-216)||(1486709-1486781)
chr1 (108-180)||(1815280-1815352)
chr1 (152-196)||(7918219-7918263)
chr1 (140-180)||(30749863-30749903)
chr1 (140-180)||(30771314-30771354)
chr1 (108-196)||(42359413-42359501)
chr1 (144-211)||(9828036-9828103)
chr1 (153-216)||(12443469-12443532)
chr1 (144-191)||(25272494-25272541)
chr1 (140-175)||(39130763-39130798)
chr1 (152-223)||(40285662-40285733)
chr1 (108-211)||(43492458-43492561)
chr1 (159-214)||(48450602-48450657)
chr1 (135-177)||(7353484-7353526)
chr1 (144-214)||(18556456-18556526)
chr1 (152-202)||(25361887-25361937)
chr1 (141-219)||(31667409-31667487)
chr1 (140-214)||(35702584-35702658)
chr1 (142-196)||(35999320-35999374)
chr1 (145-195)||(41017405-41017455)
chr1 (147-205)||(42325558-42325616)
chr1 (144-213)||(113289-113358)
chr1 (153-202)||(19324563-19324612)
chr1 (157-202)||(34298437-34298482)
chr1 (145-197)||(16927186-16927238)
chr1 (146-202)||(23738679-23738735)
chr1 (135-211)||(29163372-29163448)
chr1 (140-180)||(52903272-52903312)
[»] chr5 (38 HSPs)
chr5 (123-203)||(30502367-30502447)
chr5 (123-203)||(30542710-30542790)
chr5 (135-210)||(16203786-16203861)
chr5 (144-214)||(3966492-3966562)
chr5 (144-214)||(11685928-11685998)
chr5 (87-212)||(28588616-28588742)
chr5 (152-214)||(27144452-27144514)
chr5 (144-202)||(36838544-36838602)
chr5 (108-180)||(43564904-43564976)
chr5 (107-202)||(27932236-27932331)
chr5 (144-202)||(6471889-6471947)
chr5 (152-214)||(12264837-12264899)
chr5 (108-214)||(21191020-21191126)
chr5 (139-213)||(23220973-23221047)
chr5 (129-197)||(23012393-23012461)
chr5 (135-198)||(12927659-12927722)
chr5 (123-214)||(17123037-17123128)
chr5 (128-202)||(18421825-18421899)
chr5 (144-202)||(39205881-39205939)
chr5 (147-200)||(17593725-17593778)
chr5 (155-196)||(35017044-35017085)
chr5 (145-193)||(14873527-14873575)
chr5 (87-202)||(42893361-42893477)
chr5 (159-214)||(14674258-14674313)
chr5 (135-206)||(21576736-21576807)
chr5 (135-214)||(24906292-24906371)
chr5 (144-214)||(6035472-6035541)
chr5 (140-214)||(6247611-6247685)
chr5 (144-202)||(19579702-19579760)
chr5 (140-214)||(26312758-26312832)
chr5 (144-202)||(32766943-32767001)
chr5 (140-214)||(33178014-33178088)
chr5 (152-202)||(41091265-41091315)
chr5 (108-197)||(21194087-21194176)
chr5 (146-211)||(38749565-38749630)
chr5 (154-202)||(2577190-2577238)
chr5 (146-214)||(15410450-15410518)
chr5 (156-216)||(28262408-28262468)
[»] chr7 (49 HSPs)
chr7 (108-198)||(21880157-21880247)
chr7 (140-202)||(20549792-20549854)
chr7 (108-202)||(27093377-27093471)
chr7 (108-202)||(27184830-27184924)
chr7 (108-202)||(32287427-32287521)
chr7 (140-197)||(3721099-3721156)
chr7 (146-214)||(15902811-15902879)
chr7 (107-202)||(42720853-42720948)
chr7 (148-202)||(8160417-8160471)
chr7 (128-214)||(22484014-22484100)
chr7 (108-202)||(26733305-26733399)
chr7 (152-214)||(32308109-32308171)
chr7 (108-212)||(1433445-1433554)
chr7 (147-216)||(2948670-2948739)
chr7 (146-195)||(5233637-5233686)
chr7 (129-202)||(5835248-5835321)
chr7 (144-197)||(7328691-7328744)
chr7 (99-212)||(25481893-25482006)
chr7 (140-180)||(18213029-18213069)
chr7 (140-195)||(38143231-38143286)
chr7 (122-180)||(15680832-15680890)
chr7 (144-214)||(22602710-22602780)
chr7 (152-214)||(22868031-22868093)
chr7 (141-198)||(9482939-9482996)
chr7 (145-202)||(19206051-19206108)
chr7 (146-202)||(29787373-29787427)
chr7 (152-208)||(5548671-5548727)
chr7 (144-192)||(17307904-17307952)
chr7 (152-200)||(17851434-17851482)
chr7 (146-202)||(33384584-33384640)
chr7 (144-195)||(16341504-16341555)
chr7 (144-195)||(35297672-35297723)
chr7 (108-202)||(598209-598303)
chr7 (152-214)||(6630920-6630982)
chr7 (140-202)||(8090021-8090083)
chr7 (144-202)||(19992002-19992060)
chr7 (144-214)||(27945030-27945100)
chr7 (140-202)||(28155571-28155633)
chr7 (144-202)||(49107822-49107879)
chr7 (147-216)||(2425736-2425805)
chr7 (140-205)||(37870891-37870956)
chr7 (123-180)||(39138467-39138524)
chr7 (134-198)||(1401030-1401094)
chr7 (158-198)||(2424619-2424659)
chr7 (143-216)||(8046030-8046099)
chr7 (154-202)||(23191897-23191945)
chr7 (144-212)||(24339633-24339701)
chr7 (107-195)||(27732207-27732290)
chr7 (108-180)||(41020519-41020591)
[»] chr2 (37 HSPs)
chr2 (140-214)||(31018579-31018653)
chr2 (152-213)||(37411252-37411313)
chr2 (108-196)||(5367199-5367287)
chr2 (152-211)||(21616754-21616813)
chr2 (108-202)||(2438683-2438777)
chr2 (108-214)||(30404814-30404920)
chr2 (144-202)||(44860321-44860379)
chr2 (145-214)||(18276510-18276579)
chr2 (142-202)||(23718027-23718087)
chr2 (142-202)||(24105699-24105759)
chr2 (140-200)||(34691801-34691861)
chr2 (140-200)||(34714213-34714273)
chr2 (154-210)||(36281678-36281734)
chr2 (146-213)||(39279665-39279732)
chr2 (153-203)||(2665897-2665947)
chr2 (146-216)||(18420436-18420506)
chr2 (152-214)||(35449502-35449564)
chr2 (158-216)||(36409641-36409699)
chr2 (108-214)||(38117123-38117229)
chr2 (99-204)||(18570971-18571076)
chr2 (140-180)||(20242723-20242763)
chr2 (140-180)||(20922924-20922964)
chr2 (156-216)||(21148439-21148499)
chr2 (158-214)||(21782832-21782888)
chr2 (154-202)||(28677910-28677958)
chr2 (144-180)||(34784982-34785018)
chr2 (135-195)||(40361745-40361805)
chr2 (152-195)||(30527603-30527646)
chr2 (145-199)||(18889592-18889646)
chr2 (152-202)||(31808078-31808128)
chr2 (97-206)||(34993935-34994038)
chr2 (108-214)||(37558966-37559072)
chr2 (145-202)||(42832277-42832334)
chr2 (144-180)||(18622629-18622665)
chr2 (108-196)||(18840977-18841065)
chr2 (140-200)||(23921256-23921316)
chr2 (123-195)||(29176472-29176544)
[»] chr3 (39 HSPs)
chr3 (152-212)||(32804548-32804608)
chr3 (108-180)||(40993299-40993371)
chr3 (140-200)||(49505150-49505210)
chr3 (140-202)||(7928451-7928513)
chr3 (144-202)||(11313800-11313858)
chr3 (144-212)||(8039835-8039903)
chr3 (140-212)||(8383248-8383320)
chr3 (144-214)||(25948887-25948957)
chr3 (110-179)||(3631708-3631777)
chr3 (140-205)||(4201394-4201459)
chr3 (122-203)||(45451553-45451634)
chr3 (144-212)||(10455781-10455849)
chr3 (144-180)||(15314876-15314912)
chr3 (108-196)||(55401082-55401170)
chr3 (135-202)||(8789541-8789608)
chr3 (130-212)||(8842321-8842402)
chr3 (144-198)||(11665949-11666003)
chr3 (144-202)||(16192750-16192808)
chr3 (135-180)||(35222961-35223006)
chr3 (123-195)||(25093510-25093582)
chr3 (158-202)||(27277852-27277896)
chr3 (147-214)||(4987294-4987361)
chr3 (140-191)||(6780415-6780466)
chr3 (144-202)||(1509540-1509598)
chr3 (156-202)||(10690274-10690320)
chr3 (108-214)||(10954941-10955047)
chr3 (158-212)||(25064900-25064954)
chr3 (144-214)||(28678292-28678362)
chr3 (152-202)||(34307788-34307838)
chr3 (163-216)||(11610508-11610561)
chr3 (154-211)||(12703999-12704056)
chr3 (146-214)||(21720753-21720822)
chr3 (107-180)||(24633364-24633437)
chr3 (143-200)||(38731221-38731278)
chr3 (108-216)||(7171489-7171596)
chr3 (138-214)||(8587015-8587091)
chr3 (152-216)||(13620772-13620836)
chr3 (107-214)||(24205004-24205111)
chr3 (108-214)||(25775497-25775602)
[»] chr8 (44 HSPs)
chr8 (140-211)||(13844592-13844663)
chr8 (108-195)||(33405348-33405435)
chr8 (140-202)||(34897086-34897148)
chr8 (153-211)||(39954288-39954346)
chr8 (152-208)||(20785473-20785529)
chr8 (128-212)||(27101506-27101589)
chr8 (152-211)||(24362210-24362269)
chr8 (152-202)||(14731713-14731763)
chr8 (107-196)||(14134706-14134795)
chr8 (142-214)||(4786336-4786408)
chr8 (140-216)||(31236573-31236649)
chr8 (135-197)||(3025557-3025619)
chr8 (144-214)||(15816129-15816199)
chr8 (108-214)||(31556986-31557091)
chr8 (108-214)||(36450718-36450824)
chr8 (146-195)||(11803267-11803316)
chr8 (145-214)||(20679396-20679465)
chr8 (154-202)||(4611535-4611583)
chr8 (107-211)||(5813584-5813688)
chr8 (146-210)||(7442838-7442902)
chr8 (107-211)||(18407711-18407815)
chr8 (144-180)||(29447467-29447503)
chr8 (138-197)||(8342978-8343037)
chr8 (144-195)||(11927086-11927137)
chr8 (140-195)||(20873077-20873132)
chr8 (140-202)||(12606825-12606887)
chr8 (152-206)||(34222944-34222998)
chr8 (144-202)||(36934671-36934729)
chr8 (108-194)||(40332200-40332286)
chr8 (141-214)||(926785-926858)
chr8 (140-177)||(11833888-11833925)
chr8 (141-214)||(22595983-22596056)
chr8 (142-211)||(30077385-30077454)
chr8 (144-196)||(2572056-2572108)
chr8 (140-196)||(4948659-4948715)
chr8 (146-202)||(7658464-7658520)
chr8 (144-180)||(8847279-8847315)
chr8 (146-202)||(12570736-12570792)
chr8 (156-216)||(24447016-24447076)
chr8 (144-216)||(25172698-25172770)
chr8 (144-180)||(26902175-26902211)
chr8 (152-216)||(27213534-27213598)
chr8 (138-214)||(31109512-31109588)
chr8 (158-214)||(37283824-37283880)
[»] scaffold0697 (1 HSPs)
scaffold0697 (114-211)||(1636-1733)
[»] scaffold0050 (1 HSPs)
scaffold0050 (108-195)||(70286-70373)
[»] scaffold0036 (1 HSPs)
scaffold0036 (144-211)||(9747-9814)
[»] scaffold0123 (1 HSPs)
scaffold0123 (152-202)||(44533-44583)
[»] scaffold0053 (1 HSPs)
scaffold0053 (108-214)||(8787-8893)
[»] scaffold0022 (2 HSPs)
scaffold0022 (108-214)||(90832-90938)
scaffold0022 (144-211)||(99885-99952)
[»] scaffold0020 (1 HSPs)
scaffold0020 (144-202)||(135312-135370)
[»] scaffold0008 (1 HSPs)
scaffold0008 (152-214)||(263380-263442)
[»] scaffold0236 (1 HSPs)
scaffold0236 (144-195)||(25768-25819)
[»] scaffold0004 (1 HSPs)
scaffold0004 (159-214)||(92796-92851)
[»] scaffold0044 (1 HSPs)
scaffold0044 (147-213)||(53170-53236)
[»] scaffold0003 (1 HSPs)
scaffold0003 (144-214)||(241583-241653)
[»] scaffold0103 (1 HSPs)
scaffold0103 (150-214)||(51800-51864)


Alignment Details
Target: chr6 (Bit Score: 141; Significance: 5e-74; HSPs: 61)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 20 - 216
Target Start/End: Original strand, 32298476 - 32298679
Alignment:
Q  20 attagcaacaaaaagggatagccagatcaaaata------taaatttctaaaacactgcttttagaataggacatgaagcatga-cactctttaaattag 112  Q
    |||||||||||||||||||||||||||||| | |      |||||| |||||||| |||||||||||||||||||||||||||| ||||| | |||||||    
T  32298476 attagcaacaaaaagggatagccagatcaacaaactgtactaaattactaaaacaatgcttttagaataggacatgaagcatgaacactcatcaaattag 32298575  T
Q  113 gcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtca 212  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  32298576 gcgtgttctggtgttggacatatgtcatgtctgacaccaacacatataattacactaaattatgtgatgatcttaaattattagcggtgttggcatgtca 32298675  T
Q  213 gtat 216  Q
    ||||    
T  32298676 gtat 32298679  T

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Target: chr6; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 140 - 214
Target Start/End: Original strand, 7265589 - 7265663
Alignment:
Q  140 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    ||||||||||| ||||||||||||||||| |||||||||||  |||||||||||||||||||||||| |||||||    
T  7265589 tgtccgacaccgacacatataattacactgaattatgtgattttctcaaattattagcggtgttggcgtgtcagt 7265663  T

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Target: chr6; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 125 - 218
Target Start/End: Complemental strand, 19040430 - 19040337
Alignment:
Q  125 gttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtattc 218  Q
    |||| |||| |||| ||||||||||  ||||||||||||||||| |||||||||||  |||||||||||||||||||| ||| |||||||||||    
T  19040430 gttgaacatgtgtcgtgtccgacacagacacatataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtattc 19040337  T

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Target: chr6; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 140 - 214
Target Start/End: Original strand, 5732506 - 5732580
Alignment:
Q  140 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    ||||||||||| |||||||||||||||||||| ||||||||  ||||||||||||| |||||| ||| |||||||    
T  5732506 tgtccgacaccgacacatataattacactaaaatatgtgattttctcaaattattaacggtgtcggcgtgtcagt 5732580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 144 - 214
Target Start/End: Complemental strand, 9027237 - 9027167
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    ||||||| ||||||||||||||||  ||||||||||| ||||||||||||||||||||| ||| |||||||    
T  9027237 cgacaccgacacatataattacacggaattatgtgattatctcaaattattagcggtgtcggcgtgtcagt 9027167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 108 - 202
Target Start/End: Original strand, 32511630 - 32511724
Alignment:
Q  108 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    |||||||||| || | |||  |||||||||| | |||||||||||||| |||||||||||| |||||||||||  ||| ||||||||||||||||    
T  32511630 attaggcgtgctccgatgtcagacatatgtcgtatccgacaccaacacttataattacactgaattatgtgattttcttaaattattagcggtgt 32511724  T

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Target: chr6; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 7977783 - 7977902
Alignment:
Q  97 acactctttaaattaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattag 196  Q
    |||||| ||| ||||||||||||  | ||| ||||||||||  ||||||||||| |||| | |||||||||| |||||||| ||  | ||||||||||||    
T  7977783 acactccttagattaggcgtgtttcgttgtcggacatatgttgtgtccgacaccgacacttgtaattacactgaattatgtaattttttcaaattattag 7977882  T
Q  197 cggtgttggcatgtcagtat 216  Q
    | |||| ||| |||||||||    
T  7977883 ctgtgtcggcgtgtcagtat 7977902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 107 - 214
Target Start/End: Complemental strand, 9658975 - 9658868
Alignment:
Q  107 aattaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggc 206  Q
    |||||||||||||| |||||  ||||  |||| ||||  ||||| ||| ||||||||||||| |||||||||||  ||| |||||||||||||||| |||    
T  9658975 aattaggcgtgttccggtgtcagacacgtgtcgtgtctaacaccgacaaatataattacactgaattatgtgattttcttaaattattagcggtgtcggc 9658876  T
Q  207 atgtcagt 214  Q
     |||||||    
T  9658875 gtgtcagt 9658868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 144 - 206
Target Start/End: Complemental strand, 7151471 - 7151409
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggc 206  Q
    ||||||||||||||||||||||||| |||||||||||  | |||||||||||| |||||||||    
T  7151471 cgacaccaacacatataattacacttaattatgtgattttttcaaattattagaggtgttggc 7151409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 144 - 214
Target Start/End: Original strand, 34073347 - 34073417
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    ||||||| || |||||||||||||| ||||||| |||  |||||||||||||||| |||||||||||||||    
T  34073347 cgacaccgacccatataattacactgaattatgagattttctcaaattattagcgatgttggcatgtcagt 34073417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 125 - 205
Target Start/End: Original strand, 31579208 - 31579286
Alignment:
Q  125 gttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttgg 205  Q
    ||||||||| |||| ||||||||||| |||||||  |||||||| |||||||||||  ||||||||||||| |||||||||    
T  31579208 gttggacatgtgtcgtgtccgacaccgacacata--attacactgaattatgtgattttctcaaattattaacggtgttgg 31579286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 202
Target Start/End: Complemental strand, 7378048 - 7377980
Alignment:
Q  134 atgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    ||||| ||||||||||| ||||||||||||||| | |||||||||||  ||||||||| ||||||||||    
T  7378048 atgtcgtgtccgacaccgacacatataattacattgaattatgtgattttctcaaatttttagcggtgt 7377980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 216
Target Start/End: Complemental strand, 10294166 - 10294094
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtat 216  Q
    ||||||| ||||||||||||||| | || |||| ||| ||||||||||||||||||| | |||||||||||||    
T  10294166 cgacaccgacacatataattacattgaaatatgcgattatctcaaattattagcggtatcggcatgtcagtat 10294094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 146 - 197
Target Start/End: Complemental strand, 7086852 - 7086801
Alignment:
Q  146 acaccaacacatataattacactaaattatgtgatgatctcaaattattagc 197  Q
    ||||| |||||||||||||||||||||||||||||  |||||||||||||||    
T  7086852 acaccgacacatataattacactaaattatgtgattttctcaaattattagc 7086801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 123 - 214
Target Start/End: Original strand, 17841568 - 17841659
Alignment:
Q  123 gtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    |||| ||||| ||||| |||||||||||  ||| | ||||||||||||||||||||||  | ||||||||||||| |||| ||| |||||||    
T  17841568 gtgtcggacacatgtcgtgtccgacaccgtcacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagt 17841659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 97 - 212
Target Start/End: Original strand, 33001242 - 33001357
Alignment:
Q  97 acactctttaaattaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattag 196  Q
    |||||||||  ||||||||| ||  |||||  ||||  |||| ||||||||||| ||||||||||||||| | |||||||||||  | ||||||||||||    
T  33001242 acactctttggattaggcgtatttcggtgtcagacacgtgtcgtgtccgacaccgacacatataattacatttaattatgtgattttttcaaattattag 33001341  T
Q  197 cggtgttggcatgtca 212  Q
    | |||| ||| |||||    
T  33001342 cagtgtcggcgtgtca 33001357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 214
Target Start/End: Original strand, 7996378 - 7996448
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    ||||||| || |||||||||||||| |||||| ||||  ||||||||||||||| |||| |||||||||||    
T  7996378 cgacaccgacgcatataattacactgaattatatgattttctcaaattattagcagtgtcggcatgtcagt 7996448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 214
Target Start/End: Complemental strand, 8022423 - 8022353
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    ||||||| || |||||||||||||| |||||| ||||  ||||||||||||||| |||| |||||||||||    
T  8022423 cgacaccgacgcatataattacactgaattatatgattttctcaaattattagcagtgtcggcatgtcagt 8022353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 9025494 - 9025552
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    ||||||| ||||||||||||||||| |||||||||||  ||||||||||||||| ||||    
T  9025494 cgacaccgacacatataattacactgaattatgtgattttctcaaattattagcagtgt 9025552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 10888974 - 10889032
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    |||||| |||||||||||| |||||||||||||||||  | ||||||||||||||||||    
T  10888974 cgacactaacacatataatcacactaaattatgtgattttatcaaattattagcggtgt 10889032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 21924931 - 21924993
Alignment:
Q  140 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    ||||||||||| ||||||||||||||||| |||||| ||||  ||||||||||||||| ||||    
T  21924931 tgtccgacaccgacacatataattacactgaattatttgatattctcaaattattagcagtgt 21924993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 212
Target Start/End: Complemental strand, 9629443 - 9629374
Alignment:
Q  143 ccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtca 212  Q
    |||||||| ||||||||||||||| | |||||||||||  |||||||||||| ||||||| ||| |||||    
T  9629443 ccgacaccgacacatataattacattgaattatgtgattttctcaaattattggcggtgtcggcgtgtca 9629374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 205
Target Start/End: Original strand, 30866152 - 30866205
Alignment:
Q  152 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttgg 205  Q
    ||||||||||||||| | |||||||||||  |||||||||||||||||||||||    
T  30866152 acacatataattacattgaattatgtgattttctcaaattattagcggtgttgg 30866205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 34172256 - 34172179
Alignment:
Q  140 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtatt 217  Q
    ||||||||||| ||||||||||||  | | |||||||||||  ||||||||| |||| ||||| ||||||||||||||    
T  34172256 tgtccgacaccgacacatataattttaattaattatgtgattttctcaaattgttagaggtgtcggcatgtcagtatt 34172179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 144 - 196
Target Start/End: Original strand, 9195754 - 9195806
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattag 196  Q
    ||||||| |||||||||||||||||||||||||| ||  ||||||||||||||    
T  9195754 cgacaccgacacatataattacactaaattatgtcattttctcaaattattag 9195806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 211
Target Start/End: Complemental strand, 10842583 - 10842524
Alignment:
Q  152 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtc 211  Q
    |||||||| ||||||||||||||||||||  | |||||||||||||||||| ||| ||||    
T  10842583 acacatatgattacactaaattatgtgattttttcaaattattagcggtgtcggcgtgtc 10842524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 182
Target Start/End: Complemental strand, 12690512 - 12690437
Alignment:
Q  107 aattaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatga 182  Q
    |||||||||||||||| |||| |||| ||||  ||||||||| | ||||||||||||||| | |||||||| ||||    
T  12690512 aattaggcgtgttctgatgttagacacatgtagtgtccgacatcgacacatataattacattgaattatgttatga 12690437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 211
Target Start/End: Original strand, 21395308 - 21395374
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtc 211  Q
    ||||||| |||| | ||||||||||||||||||| ||  |||||||||||||||||||||||| ||||    
T  21395308 cgacaccgacacttgtaattacactaaattatgt-attttctcaaattattagcggtgttggcgtgtc 21395374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 214
Target Start/End: Complemental strand, 7938179 - 7938105
Alignment:
Q  140 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    |||| |||||| |||| ||||||||||||||||||| ||||  | ||||||||||||| |||| ||| |||||||    
T  7938179 tgtcggacaccgacacttataattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagt 7938105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 114 - 212
Target Start/End: Original strand, 13364675 - 13364773
Alignment:
Q  114 cgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtca 212  Q
    ||||| |||||||  ||||| | || ||||| ||||| |||||||| |||||||| |||||| ||||  ||||||||||| ||| |||| |||||||||    
T  13364675 cgtgtcctggtgtcagacatgtatcgtgtccaacaccgacacatatgattacactgaattatatgattttctcaaattataagcagtgtcggcatgtca 13364773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 214
Target Start/End: Complemental strand, 19044522 - 19044453
Alignment:
Q  145 gacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    |||||| ||||||||||| ||||| |||||||||||  ||||||||||||||  |||| ||| |||||||    
T  19044522 gacaccgacacatataataacactgaattatgtgatattctcaaattattagtcgtgtcggcgtgtcagt 19044453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 200
Target Start/End: Complemental strand, 9617493 - 9617437
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggt 200  Q
    ||||||| ||||||||||||||| | |||||||||||  ||||||||||||| ||||    
T  9617493 cgacaccgacacatataattacattgaattatgtgattttctcaaattattaccggt 9617437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 212
Target Start/End: Original strand, 20371110 - 20371178
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtca 212  Q
    ||||||| ||||||||||| ||| | | |||||||||  |||||||||||||||||||| ||| |||||    
T  20371110 cgacaccgacacatataatcacattgagttatgtgattttctcaaattattagcggtgtcggcgtgtca 20371178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 214
Target Start/End: Original strand, 21424800 - 21424872
Alignment:
Q  142 tccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    |||||||||| ||||||||| || | | | |||||||||  | |||||||||||||||||||||| |||||||    
T  21424800 tccgacaccagcacatataaatatattgacttatgtgattttttcaaattattagcggtgttggcgtgtcagt 21424872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 200
Target Start/End: Complemental strand, 24614473 - 24614413
Alignment:
Q  140 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggt 200  Q
    ||||||||||||||||||| |||||||||||||||| | ||  | | ||||||||||||||    
T  24614473 tgtccgacaccaacacatacaattacactaaattatataatttttttaaattattagcggt 24614413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 214
Target Start/End: Original strand, 8776964 - 8777043
Alignment:
Q  135 tgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    |||| |||||||||||||||| | |||||||||| |||| ||||||  | ||||||||||||  |||| ||| |||||||    
T  8776964 tgtcgtgtccgacaccaacacttgtaattacactgaattttgtgattttttcaaattattagttgtgtcggcgtgtcagt 8777043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 8805586 - 8805625
Alignment:
Q  158 ataattacactaaattatgtgatgatctcaaattattagc 197  Q
    |||||||||||||||||||||||  |||||||||||||||    
T  8805586 ataattacactaaattatgtgattttctcaaattattagc 8805625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 211
Target Start/End: Complemental strand, 26562740 - 26562681
Alignment:
Q  152 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtc 211  Q
    ||||||||||||||||| |||||||||||  ||||||||| ||||| |||| ||| ||||    
T  26562740 acacatataattacactgaattatgtgattttctcaaatttttagcagtgtcggcgtgtc 26562681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 202
Target Start/End: Complemental strand, 28715391 - 28715296
Alignment:
Q  107 aattaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    |||||||||||| | ||||| | |||  |||| ||||||||||| |||| | |||||||||| |||||||| ||  | ||||||||||||| ||||    
T  28715391 aattaggcgtgtcccggtgtcgaacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtcattttttcaaattattagccgtgt 28715296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 214
Target Start/End: Complemental strand, 677896 - 677826
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    |||||||||| ||||||| ||||||| ||||| ||||  ||||||||||||| | |||| ||| |||||||    
T  677896 cgacaccaacgcatataaatacactatattatatgattttctcaaattattaacagtgtcggcgtgtcagt 677826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 214
Target Start/End: Original strand, 10770674 - 10770744
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    ||||||| |||| | |||||||||| |||||||||||  | ||||||||||||  |||||||| |||||||    
T  10770674 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgttggcgtgtcagt 10770744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 13360368 - 13360430
Alignment:
Q  140 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    |||| |||||| | ||||||||||||||| |||||||||||  |||||||||| ||| |||||    
T  13360368 tgtctgacaccgaaacatataattacactgaattatgtgattttctcaaattactagtggtgt 13360430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 204
Target Start/End: Original strand, 13689494 - 13689552
Alignment:
Q  146 acaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttg 204  Q
    |||||||||| ||||||||||| ||||| | ||||  | ||||||||||||||||||||    
T  13689494 acaccaacacgtataattacacgaaattgtatgattttatcaaattattagcggtgttg 13689552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 202
Target Start/End: Complemental strand, 13851787 - 13851737
Alignment:
Q  152 acacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    ||||||||||||||||| ||||| || ||  ||||||||||||||||||||    
T  13851787 acacatataattacactgaattacgttattttctcaaattattagcggtgt 13851737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 214
Target Start/End: Complemental strand, 16766756 - 16766686
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    ||||||| |||| | |||||||||| |||||||||||  | ||||||||||||| |||| ||| |||||||    
T  16766756 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagt 16766686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 214
Target Start/End: Original strand, 17341672 - 17341734
Alignment:
Q  152 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    |||| |||||||||||| |||||||||||  | ||||||||||| |||||| ||| |||||||    
T  17341672 acacttataattacactgaattatgtgattttatcaaattattaacggtgtcggcgtgtcagt 17341734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 198
Target Start/End: Complemental strand, 24832639 - 24832593
Alignment:
Q  152 acacatataattacactaaattatgtgatgatctcaaattattagcg 198  Q
    ||||||||||||||||||||||||  |||  ||||||||||||||||    
T  24832639 acacatataattacactaaattataagattttctcaaattattagcg 24832593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 196
Target Start/End: Original strand, 26178683 - 26178733
Alignment:
Q  146 acaccaacacatataattacactaaattatgtgatgatctcaaattattag 196  Q
    ||||| |||||||| ||||||||||||||||||||  | ||||||||||||    
T  26178683 acaccgacacatatgattacactaaattatgtgattttatcaaattattag 26178733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 214
Target Start/End: Complemental strand, 28152193 - 28152088
Alignment:
Q  108 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggca 207  Q
    ||||||| ||| | ||||| |||||  |||| ||||||||||| |||| | |||||||||| |||||||||||  | |||||||||||||  ||| |||     
T  28152193 attaggcctgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgat-ttttcaaattattagctttgtcggcg 28152095  T
Q  208 tgtcagt 214  Q
    |||||||    
T  28152094 tgtcagt 28152088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 178
Target Start/End: Original strand, 32978863 - 32978933
Alignment:
Q  108 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtg 178  Q
    ||||| ||||| | ||||| |||||| |||| ||||||||||| |||| | |||||||||| |||||||||    
T  32978863 attagacgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacacttaattatgtg 32978933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 1532290 - 1532241
Alignment:
Q  153 cacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    |||||||||||||||| |||||||| ||  | ||||||||||||||||||    
T  1532290 cacatataattacactgaattatgtaattttatcaaattattagcggtgt 1532241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 177
Target Start/End: Complemental strand, 4864126 - 4864089
Alignment:
Q  140 tgtccgacaccaacacatataattacactaaattatgt 177  Q
    ||||||||||||||||||||||||| | ||||||||||    
T  4864126 tgtccgacaccaacacatataattaaattaaattatgt 4864089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 202
Target Start/End: Complemental strand, 5462744 - 5462687
Alignment:
Q  145 gacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    |||| ||||| ||||||||||| | |||||||||||  ||||||||||||| ||||||    
T  5462744 gacatcaacatatataattacaatgaattatgtgattttctcaaattattaacggtgt 5462687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 205
Target Start/End: Original strand, 7569172 - 7569229
Alignment:
Q  148 accaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttgg 205  Q
    |||||||| |||||||||||| |||||||| ||  ||||||||||||| | |||||||    
T  7569172 accaacacctataattacactgaattatgtaattttctcaaattattatctgtgttgg 7569229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 220
Target Start/End: Original strand, 10339133 - 10339202
Alignment:
Q  152 acacatataatta-cactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtattcat 220  Q
    ||||||||||||| |||| |||||||||||  |||||||||| | ||||||| ||| ||||||| |||||    
T  10339133 acacatataattaacactgaattatgtgattttctcaaattaatcgcggtgtcggcgtgtcagtgttcat 10339202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 196
Target Start/End: Complemental strand, 34595202 - 34595141
Alignment:
Q  135 tgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattag 196  Q
    |||| ||||||||||| |||| | |||||||||| |||||||||||  | ||||||||||||    
T  34595202 tgtcgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 34595141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 180
Target Start/End: Complemental strand, 7027301 - 7027265
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgat 180  Q
    ||||||| ||||||||||||||||| |||||||||||    
T  7027301 cgacaccgacacatataattacactgaattatgtgat 7027265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 196
Target Start/End: Complemental strand, 17302398 - 17302354
Alignment:
Q  152 acacatataattacactaaattatgtgatgatctcaaattattag 196  Q
    |||||||||||||||| ||||||||||||  ||| ||||||||||    
T  17302398 acacatataattacacaaaattatgtgattttcttaaattattag 17302354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 20518405 - 20518345
Alignment:
Q  143 ccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgtt 203  Q
    |||||||||||||||||||||| ||| | |||||| ||  ||||||||| |||| ||||||    
T  20518405 ccgacaccaacacatataattatactgatttatgtaattttctcaaattgttagtggtgtt 20518345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 214
Target Start/End: Original strand, 34290091 - 34290147
Alignment:
Q  158 ataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    ||||||||||| |||||||||||  || |||||||||||  |||| |||||||||||    
T  34290091 ataattacactgaattatgtgattctcgcaaattattagttgtgtcggcatgtcagt 34290147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 34447374 - 34447426
Alignment:
Q  160 aattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtca 212  Q
    |||||||||||||||| ||||  | ||||||||||| |||||||||| |||||    
T  34447374 aattacactaaattatatgattttatcaaattattaacggtgttggcgtgtca 34447426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 2e-20; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 108 - 214
Target Start/End: Complemental strand, 21945598 - 21945492
Alignment:
Q  108 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggca 207  Q
    ||||||||||||  ||||| |||||| |||||||||||||||| |||| | |||||||||| |||||||| ||  | ||||||||||||| |||| ||||    
T  21945598 attaggcgtgttgcggtgtcggacatgtgtcatgtccgacaccgacacttgtaattacactgaattatgtcattttttcaaattattagctgtgtcggca 21945499  T
Q  208 tgtcagt 214  Q
    |||||||    
T  21945498 tgtcagt 21945492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 108 - 202
Target Start/End: Original strand, 8423682 - 8423776
Alignment:
Q  108 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    ||||||||||| | ||||| |||||  |||| ||||||||||| |||  |||||||||||| |||||||||||  ||||||||||||||||||||    
T  8423682 attaggcgtgtcccggtgtcggacagctgtcgtgtccgacaccgacatttataattacactgaattatgtgattttctcaaattattagcggtgt 8423776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 35157949 - 35158037
Alignment:
Q  108 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattag 196  Q
    |||| |||||||| |||||||||||| |||| |||| |||||| |||| ||||||||||||||||||||||||  |  |||||||||||    
T  35157949 attaagcgtgttccggtgttggacatgtgtcgtgtcagacaccgacacttataattacactaaattatgtgatttttccaaattattag 35158037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 146 - 214
Target Start/End: Complemental strand, 36635381 - 36635313
Alignment:
Q  146 acaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    |||| |||||||||||||||||| |||||||||||  |||||||||||||| ||||||||| |||||||    
T  36635381 acacgaacacatataattacactgaattatgtgattttctcaaattattagtggtgttggcgtgtcagt 36635313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 143 - 202
Target Start/End: Complemental strand, 15029825 - 15029766
Alignment:
Q  143 ccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    |||||||||||||||||||||||||| |||||||||||  | ||||||||||||| ||||    
T  15029825 ccgacaccaacacatataattacactgaattatgtgatattttcaaattattagcagtgt 15029766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 206
Target Start/End: Complemental strand, 16189772 - 16189706
Alignment:
Q  140 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggc 206  Q
    |||||| |||| ||||| ||||||||||| |||||||||||  ||||||||| ||||||||||||||    
T  16189772 tgtccgtcaccgacacacataattacactgaattatgtgattttctcaaatttttagcggtgttggc 16189706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 195
Target Start/End: Complemental strand, 48139346 - 48139272
Alignment:
Q  121 tggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattatta 195  Q
    |||||| | |||| |||| |||| |||| ||||||||||||||||| ||||||||| ||| ||||||||||||||    
T  48139346 tggtgtcgaacatgtgtcgtgtctgacatcaacacatataattacattaaattatgagattatctcaaattatta 48139272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 205
Target Start/End: Original strand, 15659760 - 15659821
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttgg 205  Q
    ||||||||||||||||||||||||  ||||||| |||  ||||||||||||||| |||||||    
T  15659760 cgacaccaacacatataattacaccgaattatgagattttctcaaattattagcagtgttgg 15659821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 212
Target Start/End: Original strand, 23292950 - 23293054
Alignment:
Q  108 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggca 207  Q
    ||||||||||| | ||||| |||||  |||| ||||||||||| |||| | |||||| ||| |||||||||||  | ||||||||||||| |||| |||     
T  23292950 attaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattatactgaattatgtgattttttcaaattattagctgtgtcggcg 23293049  T
Q  208 tgtca 212  Q
    |||||    
T  23293050 tgtca 23293054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 204
Target Start/End: Complemental strand, 33950199 - 33950135
Alignment:
Q  140 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttg 204  Q
    |||| |||||| |||||||| |||||| |||||||||||||  ||||||||||||||||| ||||    
T  33950199 tgtctgacaccgacacatatgattacattaaattatgtgattttctcaaattattagcggcgttg 33950135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 180
Target Start/End: Original strand, 40179600 - 40179672
Alignment:
Q  108 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgat 180  Q
    |||||||||||  |||||| | |||| |||| ||||||||||| || |||||||||||||| |||||||||||    
T  40179600 attaggcgtgtcatggtgtcgaacatgtgtcgtgtccgacaccgacgcatataattacactgaattatgtgat 40179672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 152 - 212
Target Start/End: Complemental strand, 40613501 - 40613441
Alignment:
Q  152 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtca 212  Q
    ||||||||||||||||| |||||||||||  ||||||| |||||||||||| ||| |||||    
T  40613501 acacatataattacactgaattatgtgattttctcaaaatattagcggtgtcggcgtgtca 40613441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 138 - 189
Target Start/End: Complemental strand, 42015024 - 42014972
Alignment:
Q  138 catgtccgacaccaacacatataattacact-aaattatgtgatgatctcaaa 189  Q
    ||||||||||||||||||||||||||||||| || ||||||||| ||||||||    
T  42015024 catgtccgacaccaacacatataattacactgaatttatgtgattatctcaaa 42014972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 204
Target Start/End: Original strand, 7214523 - 7214582
Alignment:
Q  145 gacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttg 204  Q
    |||||| || |||||||||||| |||||||||||||  |||||||||||||| |||||||    
T  7214523 gacaccgacgcatataattacattaaattatgtgattttctcaaattattagtggtgttg 7214582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 195
Target Start/End: Original strand, 12895238 - 12895325
Alignment:
Q  108 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattatta 195  Q
    ||||||||||| | | ||| ||| | ||||| ||||||||||| |||| ||||||||||| ||||||||||||  | |||||||||||    
T  12895238 attaggcgtgtcccgatgtcggatacatgtcgtgtccgacaccgacacttataattacacaaaattatgtgattttttcaaattatta 12895325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 205
Target Start/End: Complemental strand, 29205525 - 29205442
Alignment:
Q  122 ggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttgg 205  Q
    ||||| |||||| |||| ||||| ||||| |||| | |||||||||| |||||||||||  | ||||||||||||| |||||||    
T  29205525 ggtgtcggacatgtgtcgtgtccaacaccgacacttgtaattacactgaattatgtgattttttcaaattattagccgtgttgg 29205442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 145 - 195
Target Start/End: Original strand, 5775359 - 5775409
Alignment:
Q  145 gacaccaacacatataattacactaaattatgtgatgatctcaaattatta 195  Q
    |||||| ||||||||||||||||| |||||||||||  |||||||||||||    
T  5775359 gacaccgacacatataattacacttaattatgtgattttctcaaattatta 5775409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 111 - 212
Target Start/End: Complemental strand, 49431118 - 49431016
Alignment:
Q  111 aggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtga-tgatctcaaattattagcggtgttggcatg 209  Q
    |||||||| | |||||||||||  |||| ||||||||||| |||| | |||||||||| |||||||||| |  | ||||||||||||| |||| ||| ||    
T  49431118 aggcgtgtcccggtgttggacacgtgtcgtgtccgacaccgacacttttaattacactgaattatgtgatttttttcaaattattagctgtgtcggcgtg 49431019  T
Q  210 tca 212  Q
    |||    
T  49431018 tca 49431016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 22440609 - 22440658
Alignment:
Q  153 cacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    |||||||||||||||| |||||||||||  ||||||||||||| ||||||    
T  22440609 cacatataattacactgaattatgtgattttctcaaattattaacggtgt 22440658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 196
Target Start/End: Original strand, 54580014 - 54580075
Alignment:
Q  135 tgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattag 196  Q
    |||| ||||||||||| |||| |||||||||||| |||||||||||  | ||||||||||||    
T  54580014 tgtcgtgtccgacaccgacacttataattacactgaattatgtgattttttcaaattattag 54580075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 193
Target Start/End: Original strand, 18576038 - 18576086
Alignment:
Q  145 gacaccaacacatataattacactaaattatgtgatgatctcaaattat 193  Q
    |||||||||||||||||||||||  |||||||||||  |||||||||||    
T  18576038 gacaccaacacatataattacaccgaattatgtgattttctcaaattat 18576086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 201
Target Start/End: Complemental strand, 903971 - 903924
Alignment:
Q  154 acatataattacactaaattatgtgatgatctcaaattattagcggtg 201  Q
    ||||||||||||||| |||||||||||  ||||||||||||| |||||    
T  903971 acatataattacactgaattatgtgattttctcaaattattaacggtg 903924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 180
Target Start/End: Complemental strand, 4157553 - 4157459
Alignment:
Q  87 atgaagcat-gacactctttaaattaggcgtgttct-ggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgat 180  Q
    ||||||||| ||||||| |  |||||||||| |||| ||||| |||||| |||| ||||||||||| |||| | ||||| ||||||||||||||||    
T  4157553 atgaagcatagacactcctcgaattaggcgt-ttctcggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattgcactaaattatgtgat 4157459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 180
Target Start/End: Original strand, 10499267 - 10499306
Alignment:
Q  141 gtccgacaccaacacatataattacactaaattatgtgat 180  Q
    |||||||||  |||||||||||||||||||||||||||||    
T  10499267 gtccgacactgacacatataattacactaaattatgtgat 10499306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 214
Target Start/End: Original strand, 35723392 - 35723455
Alignment:
Q  152 acacatataattacactaaattatgtg-atgatctcaaattattagcggtgttggcatgtcagt 214  Q
    ||||||||||||||| | ||||||||| ||  |||||||||||||||||||| ||| |||||||    
T  35723392 acacatataattacattgaattatgtgtattttctcaaattattagcggtgtcggcgtgtcagt 35723455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 195
Target Start/End: Complemental strand, 40784016 - 40783965
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgatgatctcaaattatta 195  Q
    |||||||||||||||| ||||| || |||||||| || ||||||||||||||    
T  40784016 cgacaccaacacatatgattacgctgaattatgttattatctcaaattatta 40783965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 198
Target Start/End: Original strand, 999356 - 999402
Alignment:
Q  152 acacatataattacactaaattatgtgatgatctcaaattattagcg 198  Q
    |||||||||||||||||||||||| ||||   |||||||||||||||    
T  999356 acacatataattacactaaattatatgatttactcaaattattagcg 999402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 2361971 - 2362033
Alignment:
Q  140 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    ||||||||||| |||| | ||||||||||||||||||| ||  | ||||||||||||| ||||    
T  2361971 tgtccgacaccgacacttttaattacactaaattatgtaattttttcaaattattagctgtgt 2362033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 180
Target Start/End: Complemental strand, 4157230 - 4157172
Alignment:
Q  122 ggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgat 180  Q
    ||||| |||||| |||| ||||||||||| |||| | ||||| ||||||||||||||||    
T  4157230 ggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattgcactaaattatgtgat 4157172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 194
Target Start/End: Complemental strand, 9996935 - 9996849
Alignment:
Q  108 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattatt 194  Q
    |||||| ||||||  |||| |||||  ||| ||||| |||||| | ||||||||||| ||| |||||||||||  ||||||||||||    
T  9996935 attaggtgtgttccagtgtcggacacgtgttatgtctgacaccgagacatataattatactgaattatgtgattttctcaaattatt 9996849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 202
Target Start/End: Complemental strand, 13134501 - 13134451
Alignment:
Q  152 acacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    |||||||||||||||||||||||||||||  ||| ||||||| ||| ||||    
T  13134501 acacatataattacactaaattatgtgattttcttaaattataagcagtgt 13134451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 13783340 - 13783282
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    |||||||  |||||||||||||||| |||| ||||||  |||||||| |||||||||||    
T  13783340 cgacaccggcacatataattacactgaattttgtgatcttctcaaataattagcggtgt 13783282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 214
Target Start/End: Original strand, 21539879 - 21539937
Alignment:
Q  156 atataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    |||||||||||||||||||| ||||  ||| |||||||||  ||||| |||||||||||    
T  21539879 atataattacactaaattatatgattttcttaaattattaatggtgtcggcatgtcagt 21539937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 209
Target Start/End: Complemental strand, 11931331 - 11931274
Alignment:
Q  152 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatg 209  Q
    ||||||||| |||||||||||||||||||  | ||| ||||||| |||||| ||||||    
T  11931331 acacatatatttacactaaattatgtgattttttcatattattaacggtgtcggcatg 11931274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 197
Target Start/End: Original strand, 28964212 - 28964301
Alignment:
Q  108 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagc 197  Q
    ||||||||||| |  |||| ||| || |||| ||||||||||  |||| | |||||||||| |||||||||||  | |||||||||||||    
T  28964212 attaggcgtgtcccagtgtcggatatgtgtcgtgtccgacacagacacttgtaattacactgaattatgtgattttttcaaattattagc 28964301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 30103342 - 30103406
Alignment:
Q  129 gacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattatt 194  Q
    |||||||||| |||  |||||| |||||||| |||||||||| |||||||||  ||||||||||||    
T  30103342 gacatatgtcgtgtttgacaccgacacatatgattacactaa-ttatgtgattttctcaaattatt 30103406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 202
Target Start/End: Original strand, 30522920 - 30522973
Alignment:
Q  149 ccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    |||||| ||||| ||||||| |||||||||||  |||||||| |||||||||||    
T  30522920 ccaacatatatagttacactgaattatgtgattttctcaaataattagcggtgt 30522973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 30982878 - 30982935
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtg 201  Q
    ||||||| |||| |||||||||||| || ||||||||  |||||||| ||||||||||    
T  30982878 cgacaccgacacttataattacactgaaatatgtgattttctcaaatcattagcggtg 30982935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 36386205 - 36386262
Alignment:
Q  138 catgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattatta 195  Q
    |||||||||||||||||| | |||||||||| ||||||||  |  |||||||||||||    
T  36386205 catgtccgacaccaacacctttaattacactgaattatgtccttttctcaaattatta 36386262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 216
Target Start/End: Complemental strand, 3731250 - 3731190
Alignment:
Q  156 atataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtat 216  Q
    |||||||||| ||||||||||||||  ||||||||||| | || | ||||| |||||||||    
T  3731250 atataattaccctaaattatgtgattttctcaaattatcaacgttattggcgtgtcagtat 3731190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 216
Target Start/End: Complemental strand, 5527234 - 5527174
Alignment:
Q  156 atataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtat 216  Q
    |||||||||| ||||||||||||||  ||||||||||| | || | ||||| |||||||||    
T  5527234 atataattaccctaaattatgtgattctctcaaattatcaacgttattggcgtgtcagtat 5527174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 180
Target Start/End: Original strand, 46083991 - 46084027
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgat 180  Q
    ||||||| |||||||||||||||||| ||||||||||    
T  46083991 cgacaccgacacatataattacactagattatgtgat 46084027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 2e-20; HSPs: 67)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 144 - 214
Target Start/End: Complemental strand, 6427409 - 6427339
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    ||||||||||||||||||||||| | |||||||||||  |||||||||||||||||||||||| |||||||    
T  6427409 cgacaccaacacatataattacattgaattatgtgattttctcaaattattagcggtgttggcgtgtcagt 6427339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 140 - 211
Target Start/End: Original strand, 14332638 - 14332709
Alignment:
Q  140 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtc 211  Q
    ||||||||||| | |||||||||||||||||||||||||||  |||||||||||||| ||||| ||||||||    
T  14332638 tgtccgacaccgagacatataattacactaaattatgtgattttctcaaattattagtggtgtgggcatgtc 14332709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 140 - 214
Target Start/End: Complemental strand, 9709883 - 9709809
Alignment:
Q  140 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    ||||||||||| |||||||||||||||   |||||||||||  |||||||||||||||||||| |||||||||||    
T  9709883 tgtccgacaccgacacatataattacaacgaattatgtgattttctcaaattattagcggtgtaggcatgtcagt 9709809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 123 - 214
Target Start/End: Complemental strand, 36878541 - 36878450
Alignment:
Q  123 gtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    |||| |||||| | || |||| |||||| |||| |||||||||||| |||||||||||  |||||||||||||||||||| ||| |||||||    
T  36878541 gtgtcggacatgtttcgtgtcagacaccgacacctataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagt 36878450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 96 - 214
Target Start/End: Original strand, 8842666 - 8842784
Alignment:
Q  96 gacactctttaaattaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattatta 195  Q
    |||||||||| |||||||||||| ||| ||| ||| |  |||| ||||||||||||| ||||||||||||| |||||||| || |  |||||||||| ||    
T  8842666 gacactctttgaattaggcgtgtcctgatgtcggatacgtgtcgtgtccgacaccaatacatataattacattaaattatatgtttttctcaaattacta 8842765  T
Q  196 gcggtgttggcatgtcagt 214  Q
    | ||||  ||| |||||||    
T  8842766 gtggtgccggcgtgtcagt 8842784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 108 - 202
Target Start/End: Original strand, 38078625 - 38078719
Alignment:
Q  108 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    ||||||||||| ||||||||| |||| |||| ||||||||||| |||| | |||||||| | |||||||||||  | ||||||||||||| ||||    
T  38078625 attaggcgtgtcctggtgttgaacatgtgtcgtgtccgacaccgacacttgtaattacattgaattatgtgattttttcaaattattagctgtgt 38078719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 39953142 - 39953204
Alignment:
Q  140 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    ||||||||||| ||||||| |||||||||||||||||||||  ||| ||||||||||||||||    
T  39953142 tgtccgacaccgacacatacaattacactaaattatgtgattttctaaaattattagcggtgt 39953204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 108 - 202
Target Start/End: Complemental strand, 40181966 - 40181872
Alignment:
Q  108 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    ||||||||||| | ||||| |||||  |||  ||||||||||| | ||||||||||||||| |||||||||||  ||||||||||||||| ||||    
T  40181966 attaggcgtgtcccggtgtaggacacgtgttgtgtccgacaccgatacatataattacactgaattatgtgattttctcaaattattagcagtgt 40181872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 128 - 214
Target Start/End: Original strand, 2896105 - 2896191
Alignment:
Q  128 ggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    ||||| ||||| |||| |||||| ||| |||||  |||||| |||||||||||  |||||||||||||||||||| ||| |||||||    
T  2896105 ggacacatgtcgtgtctgacaccgacatatatagctacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagt 2896191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 108 - 202
Target Start/End: Original strand, 5898230 - 5898324
Alignment:
Q  108 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    ||||| ||||| | |||||||||||  |||| |||| |||||| || |||||||||||||| |||||||||||  | ||| ||||||||||||||    
T  5898230 attagacgtgtcccggtgttggacacgtgtcgtgtctgacaccgacgcatataattacactgaattatgtgattttttcagattattagcggtgt 5898324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 13436521 - 13436459
Alignment:
Q  140 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    ||||||||||||||||||||||||||||| |||||||||||   || ||||||||||| ||||    
T  13436521 tgtccgacaccaacacatataattacactgaattatgtgatttccttaaattattagcagtgt 13436459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 108 - 202
Target Start/End: Original strand, 22515851 - 22515945
Alignment:
Q  108 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    |||||||||||   ||||| ||| || |||| ||||||||||| |||| | ||||||||||||||||||||||  | ||||||||||||| ||||    
T  22515851 attaggcgtgtctcggtgtcggatatgtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgt 22515945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 41877466 - 41877528
Alignment:
Q  140 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    ||||||||||| |||| | ||||||||||||||||||| ||  ||||||||||||||||||||    
T  41877466 tgtccgacaccgacacttgtaattacactaaattatgtaattttctcaaattattagcggtgt 41877528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 114 - 211
Target Start/End: Complemental strand, 21530778 - 21530681
Alignment:
Q  114 cgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtc 211  Q
    ||||| || |||| |||||| |||| ||||||||||| |||| |||||||| || ||||||| ||||  ||||||||||||| |||||| ||| ||||    
T  21530778 cgtgtcctagtgtcggacatgtgtcgtgtccgacaccgacacttataattataccaaattatatgattttctcaaattattaacggtgtcggcgtgtc 21530681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 214
Target Start/End: Complemental strand, 36906051 - 36905986
Alignment:
Q  149 ccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    ||||||||||||||||| || |||||||||||  ||||| |||||||||||||||||  |||||||    
T  36906051 ccaacacatataattactctgaattatgtgattttctcagattattagcggtgttggtgtgtcagt 36905986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 203
Target Start/End: Complemental strand, 28674880 - 28674800
Alignment:
Q  123 gtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgtt 203  Q
    ||||||||||  |||| |||| |||||||||| ||||||||| ||| |||||||| ||  ||||||||||||| |||||||    
T  28674880 gtgttggacaagtgtcgtgtctgacaccaacatatataattatactgaattatgtaattttctcaaattattaacggtgtt 28674800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 122 - 214
Target Start/End: Original strand, 46348361 - 46348453
Alignment:
Q  122 ggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    ||||| |||||  |||| ||||||||||| |||| | ||||||||||||||||| ||||  | ||||||||||||| |||| ||| |||||||    
T  46348361 ggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagt 46348453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 195
Target Start/End: Original strand, 1864876 - 1864931
Alignment:
Q  140 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattatta 195  Q
    ||||| ||||| ||||||||||||||||| |||||||||||  |||||||||||||    
T  1864876 tgtccaacaccgacacatataattacactgaattatgtgattttctcaaattatta 1864931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 214
Target Start/End: Original strand, 22881607 - 22881686
Alignment:
Q  135 tgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    |||| ||||||||||| |||| | ||||||||||||||||||||||  | ||||||||||||  |||| ||| |||||||    
T  22881607 tgtcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagt 22881686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 211
Target Start/End: Original strand, 25098563 - 25098622
Alignment:
Q  152 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtc 211  Q
    ||||||||||||||||| |||||||||||  ||||||||||| |||||||| ||| ||||    
T  25098563 acacatataattacactgaattatgtgattttctcaaattatcagcggtgtcggcttgtc 25098622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 200
Target Start/End: Original strand, 27471567 - 27471622
Alignment:
Q  145 gacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggt 200  Q
    ||||||||||||| |||||||||| ||||||||| |  ||||||||||||||||||    
T  27471567 gacaccaacacatgtaattacactgaattatgtgcttttctcaaattattagcggt 27471622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 195
Target Start/End: Original strand, 40258897 - 40258984
Alignment:
Q  108 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattatta 195  Q
    ||||||||||| ||||||| |||||  |||| |||| |||||| |||| | |||||||||| |||||||||||  | |||||||||||    
T  40258897 attaggcgtgtcctggtgtcggacaggtgtcgtgtctgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 40258984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 199
Target Start/End: Complemental strand, 44482289 - 44482234
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcgg 199  Q
    ||||||| ||||||||||||||||| |||||||||||  ||||||||||| |||||    
T  44482289 cgacaccgacacatataattacactgaattatgtgattttctcaaattataagcgg 44482234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 152 - 214
Target Start/End: Original strand, 398773 - 398835
Alignment:
Q  152 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    |||| |||||||||||| |||||||||||  | |||||||||||||||||| ||| |||||||    
T  398773 acacctataattacactgaattatgtgattttttcaaattattagcggtgtcggcgtgtcagt 398835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 128 - 214
Target Start/End: Original strand, 5927324 - 5927410
Alignment:
Q  128 ggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    |||||| |||||||||||||||  |||| | |||||||| |||||||| ||||  | ||||||||||||| ||||| || |||||||    
T  5927324 ggacatttgtcatgtccgacactgacacttgtaattacattaaattatatgattttttcaaattattagcagtgttagcgtgtcagt 5927410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 146 - 220
Target Start/End: Original strand, 10572591 - 10572665
Alignment:
Q  146 acaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtattcat 220  Q
    ||||| |||||| |||||||||  |||||||||||  |||||||||||||| ||||| ||| ||||||| |||||    
T  10572591 acaccgacacatttaattacaccgaattatgtgattttctcaaattattagtggtgtcggcgtgtcagtgttcat 10572665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 146 - 196
Target Start/End: Original strand, 12713329 - 12713379
Alignment:
Q  146 acaccaacacatataattacactaaattatgtgatgatctcaaattattag 196  Q
    ||||||| |||||||||||||||||||||||||||  ||| ||||||||||    
T  12713329 acaccaatacatataattacactaaattatgtgattttcttaaattattag 12713379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 146 - 196
Target Start/End: Original strand, 12717420 - 12717470
Alignment:
Q  146 acaccaacacatataattacactaaattatgtgatgatctcaaattattag 196  Q
    ||||||| |||||||||||||||||||||||||||  ||| ||||||||||    
T  12717420 acaccaatacatataattacactaaattatgtgattttcttaaattattag 12717470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 108 - 214
Target Start/End: Complemental strand, 13997978 - 13997872
Alignment:
Q  108 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggca 207  Q
    ||||| |||||  ||||||| ||||| |||| | ||| ||||| ||||||||||||||||| |||||||||||  | | |||| |||| |||||| |||     
T  13997978 attagacgtgtcatggtgtttgacatgtgtcgtctccaacaccgacacatataattacactgaattatgtgatttttttaaataattaacggtgtcggcg 13997879  T
Q  208 tgtcagt 214  Q
    |||||||    
T  13997878 tgtcagt 13997872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 152 - 214
Target Start/End: Original strand, 17831539 - 17831601
Alignment:
Q  152 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    |||||||| |||||||| ||| |||||||  |||||||||||||||||||| ||| |||||||    
T  17831539 acacatatgattacactgaataatgtgattttctcaaattattagcggtgtcggcgtgtcagt 17831601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 20157350 - 20157408
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    ||||||| |||||||| |||||||| |||||||||||  ||||| ||||||||||||||    
T  20157350 cgacaccgacacatatgattacactgaattatgtgattttctcacattattagcggtgt 20157408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 34371772 - 34371715
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    ||||||| ||||||||||||||||| |||||||||||  |||| |||||||||||||||    
T  34371772 cgacaccgacacatataattacactgaattatgtgattttctc-aattattagcggtgt 34371715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 205
Target Start/End: Complemental strand, 10233304 - 10233251
Alignment:
Q  152 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttgg 205  Q
    ||||||||||||||||| |||||||||||  |||||| ||||||| ||||||||    
T  10233304 acacatataattacactgaattatgtgattttctcaatttattagtggtgttgg 10233251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 214
Target Start/End: Original strand, 19562622 - 19562691
Alignment:
Q  145 gacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    |||||| ||||||||||||||||| || |||| |||  ||||||||||||||| |||| ||| |||||||    
T  19562622 gacacctacacatataattacactgaactatgagattttctcaaattattagcagtgtcggcgtgtcagt 19562691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 211
Target Start/End: Original strand, 25452162 - 25452215
Alignment:
Q  158 ataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtc 211  Q
    ||||||||||| ||||||| |||  ||||||||||||||| |||||||||||||    
T  25452162 ataattacactgaattatgagattttctcaaattattagcagtgttggcatgtc 25452215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 29229527 - 29229462
Alignment:
Q  138 catgtccgacaccaacacatataattac-actaaattatgtgatgatctcaaattattagcggtgt 202  Q
    |||| |||||||| |||||||||||||| ||||||| |||||||  ||||||||||||||| ||||    
T  29229527 catgcccgacaccgacacatataattaccactaaatcatgtgattttctcaaattattagcagtgt 29229462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 197
Target Start/End: Original strand, 34712391 - 34712436
Alignment:
Q  152 acacatataattacactaaattatgtgatgatctcaaattattagc 197  Q
    |||||||||||||||||||||||||| ||  |||||||||||||||    
T  34712391 acacatataattacactaaattatgttattttctcaaattattagc 34712436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 202
Target Start/End: Original strand, 38075911 - 38076028
Alignment:
Q  87 atgaagcatg-acactctttaaattaggcgtgttctggtgttggacatatgtc-atgtccgacaccaacacatataattacactaaattatgtgatgatc 184  Q
    |||||||||| |||||| | ||||||||||||| | ||||| || || |  || |||||||||||| |||||||| |||||||| | |||||||||   |    
T  38075911 atgaagcatgtacactcctcaaattaggcgtgtcccggtgtcggtcacacatcgatgtccgacaccgacacatatgattacactgacttatgtgatttac 38076010  T
Q  185 tcaaattattagcggtgt 202  Q
    ||||||||||||| ||||    
T  38076011 tcaaattattagcagtgt 38076028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 202
Target Start/End: Complemental strand, 38503378 - 38503321
Alignment:
Q  145 gacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    |||||| ||||||||||||||||| || ||| ||||  ||||||||||||||||||||    
T  38503378 gacaccgacacatataattacactgaaatatatgattttctcaaattattagcggtgt 38503321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 1486709 - 1486781
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtat 216  Q
    ||||||| |||| |||||||||||| |||||||||||  | ||||||||||||| ||||  || |||||||||    
T  1486709 cgacaccgacacttataattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtat 1486781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 180
Target Start/End: Complemental strand, 1815352 - 1815280
Alignment:
Q  108 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgat 180  Q
    ||||||||||| | ||||| |||||| |||| |||| |||||| |||| | |||||||||| |||||||||||    
T  1815352 attaggcgtgtcccggtgtcggacatgtgtcgtgtcggacaccgacacttgtaattacactgaattatgtgat 1815280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 196
Target Start/End: Original strand, 7918219 - 7918263
Alignment:
Q  152 acacatataattacactaaattatgtgatgatctcaaattattag 196  Q
    ||||||||||||||||| |||||||||||  ||||||||||||||    
T  7918219 acacatataattacactgaattatgtgattttctcaaattattag 7918263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 180
Target Start/End: Complemental strand, 30749903 - 30749863
Alignment:
Q  140 tgtccgacaccaacacatataattacactaaattatgtgat 180  Q
    ||||||||||| ||||||||||||||||| |||||||||||    
T  30749903 tgtccgacaccgacacatataattacactgaattatgtgat 30749863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 180
Target Start/End: Complemental strand, 30771354 - 30771314
Alignment:
Q  140 tgtccgacaccaacacatataattacactaaattatgtgat 180  Q
    ||||||||||| ||||||||||||||||| |||||||||||    
T  30771354 tgtccgacaccgacacatataattacactgaattatgtgat 30771314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 42359413 - 42359501
Alignment:
Q  108 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattag 196  Q
    ||||||||||| | ||||| ||||| | ||| ||||||||||| |||| | |||||||||| |||| ||||||  | ||||||||||||    
T  42359413 attaggcgtgtcccggtgtcggacacacgtcttgtccgacaccgacacttgtaattacactgaattttgtgattttttcaaattattag 42359501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 211
Target Start/End: Complemental strand, 9828103 - 9828036
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtc 211  Q
    ||||||| ||||||| ||||||||| |||||||||||  | |||||||||||| ||||| ||| ||||    
T  9828103 cgacaccgacacataaaattacactgaattatgtgattttatcaaattattagtggtgtcggcgtgtc 9828036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 216
Target Start/End: Original strand, 12443469 - 12443532
Alignment:
Q  153 cacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtat 216  Q
    |||||| ||||||||| |||||||||||  ||||||||||||||| |||| ||| |||| ||||    
T  12443469 cacatacaattacactgaattatgtgattttctcaaattattagctgtgtcggcgtgtccgtat 12443532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 191
Target Start/End: Complemental strand, 25272541 - 25272494
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgatgatctcaaatt 191  Q
    ||||||| |||| ||||||||||||||||||||||||  |||||||||    
T  25272541 cgacaccgacacttataattacactaaattatgtgattttctcaaatt 25272494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 175
Target Start/End: Original strand, 39130763 - 39130798
Alignment:
Q  140 tgtccgacaccaacacatataattacactaaattat 175  Q
    ||||||||||| ||||||||||||||||||||||||    
T  39130763 tgtccgacaccgacacatataattacactaaattat 39130798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 223
Target Start/End: Original strand, 40285662 - 40285733
Alignment:
Q  152 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtattcatctc 223  Q
    |||||||| | |||||| ||||||| |||  |||||||||||||||||||||||  ||||||| | ||||||    
T  40285662 acacatatgactacactgaattatgcgattttctcaaattattagcggtgttggtgtgtcagtgtccatctc 40285733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 211
Target Start/End: Original strand, 43492458 - 43492561
Alignment:
Q  108 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggca 207  Q
    ||||||||||| | ||||| |||||| |||  |||| |||||| ||||| ||||||||||  ||||| |||||  |||||||||| ||| ||||| |||     
T  43492458 attaggcgtgtgccggtgtcggacatgtgttgtgtctgacaccgacacacataattacaccgaattacgtgattttctcaaattactagtggtgtcggcg 43492557  T
Q  208 tgtc 211  Q
    ||||    
T  43492558 tgtc 43492561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 214
Target Start/End: Original strand, 48450602 - 48450657
Alignment:
Q  159 taattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    ||||||||||||||||||| ||  | ||||||||||||| |||||||| |||||||    
T  48450602 taattacactaaattatgttattttttcaaattattagctgtgttggcgtgtcagt 48450657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 177
Target Start/End: Original strand, 7353484 - 7353526
Alignment:
Q  135 tgtcatgtccgacaccaacacatataattacactaaattatgt 177  Q
    |||||||| ||||||| ||| ||||||||||||||||||||||    
T  7353484 tgtcatgttcgacaccgacatatataattacactaaattatgt 7353526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 214
Target Start/End: Original strand, 18556456 - 18556526
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    ||||||||| || | |||||||| |||||||||||||  | ||||||||||||| |||| ||| |||||||    
T  18556456 cgacaccaatacttgtaattacattaaattatgtgatattttcaaattattagctgtgtcggcgtgtcagt 18556526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 202
Target Start/End: Complemental strand, 25361937 - 25361887
Alignment:
Q  152 acacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    ||||||||||||||||| |||||||||||  ||||||||||| || |||||    
T  25361937 acacatataattacactgaattatgtgattttctcaaattatcagtggtgt 25361887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 219
Target Start/End: Complemental strand, 31667487 - 31667409
Alignment:
Q  141 gtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtattca 219  Q
    |||||||||| |||||| | |||||| | |||||||| ||  ||| ||||||||| | |||||| ||||||||||||||    
T  31667487 gtccgacaccgacacatgtgattacatttaattatgtcattttctaaaattattaccagtgttgacatgtcagtattca 31667409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 214
Target Start/End: Original strand, 35702584 - 35702658
Alignment:
Q  140 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    ||||||||||  |||| | |||||||||| |||||| ||| | | ||||||||||||| |||| |||||||||||    
T  35702584 tgtccgacactgacacttgtaattacacttaattatttgaagttttcaaattattagctgtgtcggcatgtcagt 35702658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 196
Target Start/End: Original strand, 35999320 - 35999374
Alignment:
Q  142 tccgacaccaacacatataattacactaaattatgtgatgatctcaaattattag 196  Q
    ||||||| ||||||||||||||| |||||||||| ||||  ||| ||||||||||    
T  35999320 tccgacatcaacacatataattatactaaattatatgattttcttaaattattag 35999374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 195
Target Start/End: Original strand, 41017405 - 41017455
Alignment:
Q  145 gacaccaacacatataattacactaaattatgtgatgatctcaaattatta 195  Q
    |||||||||| ||||||||||| |||||||||| ||  |||||||||||||    
T  41017405 gacaccaacatatataattacattaaattatgtcattttctcaaattatta 41017455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 205
Target Start/End: Complemental strand, 42325616 - 42325558
Alignment:
Q  147 caccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttgg 205  Q
    |||||||||||||  ||||||| |||||||| ||  ||||||||||||| |||||||||    
T  42325616 caccaacacatattgttacactgaattatgtcattttctcaaattattatcggtgttgg 42325558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 213
Target Start/End: Complemental strand, 113358 - 113289
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcag 213  Q
    ||||||| |||| | |||||||||| |||||||||||  | ||||||||||||| |||| ||| ||||||    
T  113358 cgacacctacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcag 113289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 19324612 - 19324563
Alignment:
Q  153 cacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    |||||||||||||||| |||||||||||  ||||||||||| ||| ||||    
T  19324612 cacatataattacactgaattatgtgattttctcaaattatcagcagtgt 19324563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 202
Target Start/End: Complemental strand, 34298482 - 34298437
Alignment:
Q  157 tataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    |||||||||||| |||||||||||  |||||||||||||| |||||    
T  34298482 tataattacactgaattatgtgattttctcaaattattagtggtgt 34298437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 16927186 - 16927238
Alignment:
Q  145 gacaccaacacatataattacactaaattatgtgatgatctcaaattattagc 197  Q
    |||||||||| ||||||||||||| |||||| ||||  | |||||||||||||    
T  16927186 gacaccaacatatataattacactgaattatatgattttttcaaattattagc 16927238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 202
Target Start/End: Complemental strand, 23738735 - 23738679
Alignment:
Q  146 acaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    |||||||||||| ||||| |||| |||||||||||  | ||||||||||||| ||||    
T  23738735 acaccaacacatttaattgcactgaattatgtgattttttcaaattattagctgtgt 23738679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 211
Target Start/End: Original strand, 29163372 - 29163448
Alignment:
Q  135 tgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtc 211  Q
    |||| ||||||||||| ||||||||||||| | | |||||||||||  ||  ||||| |||||||||| ||| ||||    
T  29163372 tgtcgtgtccgacaccgacacatataattaaattgaattatgtgattttcctaaatttttagcggtgtcggcgtgtc 29163448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 180
Target Start/End: Complemental strand, 52903312 - 52903272
Alignment:
Q  140 tgtccgacaccaacacatataattacactaaattatgtgat 180  Q
    ||||||||||| ||||||||||||||||| |||||| ||||    
T  52903312 tgtccgacaccgacacatataattacactgaattatatgat 52903272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 4e-19; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 123 - 203
Target Start/End: Original strand, 30502367 - 30502447
Alignment:
Q  123 gtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgtt 203  Q
    |||| |||||| |||| ||||||||||| ||||||||||||||||| ||||| |||||  |||||||||||||||||||||    
T  30502367 gtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattaagtgattttctcaaattattagcggtgtt 30502447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 123 - 203
Target Start/End: Original strand, 30542710 - 30542790
Alignment:
Q  123 gtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgtt 203  Q
    |||| |||||| |||| ||||||||||| ||||||||||||||||| ||||| |||||  |||||||||||||||||||||    
T  30542710 gtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattaagtgattttctcaaattattagcggtgtt 30542790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 135 - 210
Target Start/End: Original strand, 16203786 - 16203861
Alignment:
Q  135 tgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgt 210  Q
    |||| ||||||||||| ||||||||||||||||||||||||| |||  ||||||||||||||| |||| |||||||    
T  16203786 tgtcttgtccgacaccgacacatataattacactaaattatgagattttctcaaattattagcagtgtcggcatgt 16203861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 144 - 214
Target Start/End: Complemental strand, 3966562 - 3966492
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    ||||||| ||||||||||||||||| |||| ||||||  |||||||||||||||||||| |||||||||||    
T  3966562 cgacaccgacacatataattacactgaattgtgtgattttctcaaattattagcggtgtcggcatgtcagt 3966492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 144 - 214
Target Start/End: Complemental strand, 11685998 - 11685928
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    ||||||| ||||||||||||||||||||||||| ||   |||||||||||||||||||| |||||||||||    
T  11685998 cgacaccgacacatataattacactaaattatgcgactttctcaaattattagcggtgtcggcatgtcagt 11685928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 87 - 212
Target Start/End: Original strand, 28588616 - 28588742
Alignment:
Q  87 atgaagcatg-acactctttaaattaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatct 185  Q
    |||||||||| ||||||||   |||| |||||| |||||||  || || |||| ||||||||||| |||| |||||||||||| |||||||||||  |||    
T  28588616 atgaagcatggacactcttcggattaagcgtgtcctggtgtcagatatgtgtcgtgtccgacaccgacacctataattacactgaattatgtgattttct 28588715  T
Q  186 caaattattagcggtgttggcatgtca 212  Q
    |||||||||| |||||| ||| |||||    
T  28588716 caaattattaccggtgtcggcgtgtca 28588742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 152 - 214
Target Start/End: Complemental strand, 27144514 - 27144452
Alignment:
Q  152 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    |||||||||||||||||||||||||||||   ||||||||||||||||||| ||| |||||||    
T  27144514 acacatataattacactaaattatgtgatttcctcaaattattagcggtgtcggcgtgtcagt 27144452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 36838602 - 36838544
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    ||||||| |||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  36838602 cgacaccgacacatataattacactaaattatgtaattttctcaaattattagcggtgt 36838544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 180
Target Start/End: Complemental strand, 43564976 - 43564904
Alignment:
Q  108 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgat 180  Q
    ||||||||||| | || || ||||| ||||| ||||||||||| |||| ||||||||||||||||||||||||    
T  43564976 attaggcgtgtcccggcgtcggacacatgtcgtgtccgacaccgacacttataattacactaaattatgtgat 43564904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 107 - 202
Target Start/End: Complemental strand, 27932331 - 27932236
Alignment:
Q  107 aattaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    |||||||||||| |||||||  ||||  |||| ||||||||||||| |  | |||||||||| |||||||| ||  ||||||||||||||||||||    
T  27932331 aattaggcgtgtcctggtgtccgacacgtgtcgtgtccgacaccaagatttgtaattacactgaattatgtaattttctcaaattattagcggtgt 27932236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 6471889 - 6471947
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    ||||||| ||||||||||||||||| |||||||||||  ||||||||||||||| ||||    
T  6471889 cgacacccacacatataattacactgaattatgtgattttctcaaattattagccgtgt 6471947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 152 - 214
Target Start/End: Original strand, 12264837 - 12264899
Alignment:
Q  152 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    ||||||||||||||||| ||| |||| ||  |||||||| |||||||||||||||||||||||    
T  12264837 acacatataattacactgaatcatgtaattttctcaaataattagcggtgttggcatgtcagt 12264899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 108 - 214
Target Start/End: Original strand, 21191020 - 21191126
Alignment:
Q  108 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggca 207  Q
    ||||||||||| | || || |||||  |||  ||||||||||| |||| | |||||||||| |||||||||||  | ||||||||||||| |||| ||||    
T  21191020 attaggcgtgtcccggagtcggacacgtgttgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggca 21191119  T
Q  208 tgtcagt 214  Q
    |||||||    
T  21191120 tgtcagt 21191126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 139 - 213
Target Start/End: Complemental strand, 23221047 - 23220973
Alignment:
Q  139 atgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcag 213  Q
    |||||| ||||| |||||||| || |||||||||||||||||  | |||||||||||||||||| | ||||||||    
T  23221047 atgtccaacaccgacacatatgataacactaaattatgtgattttatcaaattattagcggtgtcgacatgtcag 23220973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 197
Target Start/End: Original strand, 23012393 - 23012461
Alignment:
Q  129 gacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagc 197  Q
    ||||| |||| ||||| ||||| ||||||||||||||| |||||||| ||||  |||||||||||||||    
T  23012393 gacatgtgtcgtgtccaacaccgacacatataattacattaaattatatgattttctcaaattattagc 23012461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 198
Target Start/End: Complemental strand, 12927722 - 12927659
Alignment:
Q  135 tgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcg 198  Q
    ||||||||| |||||  ||| |||||||||||||||||||| ||||  ||||||||||||||||    
T  12927722 tgtcatgtctgacactgacatatataattacactaaattatatgattttctcaaattattagcg 12927659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 214
Target Start/End: Complemental strand, 17123128 - 17123037
Alignment:
Q  123 gtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    |||| |||||| | || ||||| ||||| ||| ||||||||  |||  ||||||||||  |||||||||||||||||||||||| |||||||    
T  17123128 gtgtcggacatgtttcgtgtccaacaccgacatatataattgtacttgattatgtgattttctcaaattattagcggtgttggcgtgtcagt 17123037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 128 - 202
Target Start/End: Original strand, 18421825 - 18421899
Alignment:
Q  128 ggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    |||||| |||| |||||||| || |||||||||||||||||  ||||||||||  ||||||||||| ||| ||||    
T  18421825 ggacatgtgtcgtgtccgacgccgacacatataattacactggattatgtgattttctcaaattatcagcagtgt 18421899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 39205939 - 39205881
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    ||||||||||||||||||||||||  |||||| ||||  ||||||||||||||| ||||    
T  39205939 cgacaccaacacatataattacacctaattatatgattttctcaaattattagcagtgt 39205881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 200
Target Start/End: Original strand, 17593725 - 17593778
Alignment:
Q  147 caccaacacatataattacactaaattatgtgatgatctcaaattattagcggt 200  Q
    |||||||| ||||||||||||| ||||| |||||  ||||||||||||||||||    
T  17593725 caccaacatatataattacactgaattacgtgattttctcaaattattagcggt 17593778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 196
Target Start/End: Complemental strand, 35017085 - 35017044
Alignment:
Q  155 catataattacactaaattatgtgatgatctcaaattattag 196  Q
    ||||||||||||||||||||||||||  ||||||||||||||    
T  35017085 catataattacactaaattatgtgattttctcaaattattag 35017044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 193
Target Start/End: Complemental strand, 14873575 - 14873527
Alignment:
Q  145 gacaccaacacatataattacactaaattatgtgatgatctcaaattat 193  Q
    |||||| ||||||||||||||||||||||||||| |  |||||||||||    
T  14873575 gacaccgacacatataattacactaaattatgtgcttttctcaaattat 14873527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 202
Target Start/End: Complemental strand, 42893477 - 42893361
Alignment:
Q  87 atgaagcatg-acactctttaaattaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatct 185  Q
    |||||||||| |||||| | | ||||||||||| ||||||| |||||  |||  |||| |||||| |||| | ||||||||||  ||||||||||  | |    
T  42893477 atgaagcatggacactcctcatattaggcgtgtcctggtgtcggacacgtgttgtgtctgacaccgacacttgtaattacactggattatgtgatttttt 42893378  T
Q  186 caaattattagcggtgt 202  Q
    |||||||||||| ||||    
T  42893377 caaattattagctgtgt 42893361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 214
Target Start/End: Complemental strand, 14674313 - 14674258
Alignment:
Q  159 taattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    ||||||||||||||||||||||  | ||||||||||||| |||| ||| |||||||    
T  14674313 taattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagt 14674258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 206
Target Start/End: Original strand, 21576736 - 21576807
Alignment:
Q  135 tgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggc 206  Q
    |||| ||||||||| | |||| | |||||||||| |||||||||||  | ||||||||||||| ||||||||    
T  21576736 tgtcgtgtccgacatcgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgttggc 21576807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 214
Target Start/End: Original strand, 24906292 - 24906371
Alignment:
Q  135 tgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    |||||||||||| ||| |||| | |||||||||| |||||||| ||  | ||||||||||| | |||||||| |||||||    
T  24906292 tgtcatgtccgataccgacacttgtaattacactgaattatgtcattttttcaaattattatctgtgttggcgtgtcagt 24906371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 214
Target Start/End: Complemental strand, 6035541 - 6035472
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    ||||||| ||| ||||||||||||| |||||| | ||  |||||||||||||||||||| ||| |||||||    
T  6035541 cgacaccgacaaatataattacactgaattatattatt-tctcaaattattagcggtgtcggcgtgtcagt 6035472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 214
Target Start/End: Complemental strand, 6247685 - 6247611
Alignment:
Q  140 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    ||||||||||| |||| | |||||||||| |||||||||||  | ||||||||||||  |||| ||| |||||||    
T  6247685 tgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagatgtgtcggcgtgtcagt 6247611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 19579760 - 19579702
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    ||||||| |||| | ||||| ||||||||||||||||  ||||||||||||||| ||||    
T  19579760 cgacaccgacacttgtaattgcactaaattatgtgattttctcaaattattagctgtgt 19579702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 214
Target Start/End: Complemental strand, 26312832 - 26312758
Alignment:
Q  140 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    ||||||||||| | ||||||||||||||| |||||  ||||  |||||||||||| ||||| | ||||| |||||    
T  26312832 tgtccgacaccgatacatataattacactgaattaattgattttctcaaattatttgcggtatcggcatatcagt 26312758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 32766943 - 32767001
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    |||||| |||||||||||||||| | |||| || |||  ||||||||||||||||||||    
T  32766943 cgacacaaacacatataattacattgaattgtgcgattttctcaaattattagcggtgt 32767001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 214
Target Start/End: Complemental strand, 33178088 - 33178014
Alignment:
Q  140 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    ||||||||||| |||| | ||||||||||||||||||||||  | | ||||||||||  |||| ||| |||||||    
T  33178088 tgtccgacaccgacacttgtaattacactaaattatgtgatttttttaaattattagttgtgtcggcgtgtcagt 33178014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 202
Target Start/End: Original strand, 41091265 - 41091315
Alignment:
Q  152 acacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    ||||||||||||||||| |||||||||||  |||||||| |||||| ||||    
T  41091265 acacatataattacactgaattatgtgattttctcaaatcattagcagtgt 41091315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 197
Target Start/End: Original strand, 21194087 - 21194176
Alignment:
Q  108 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagc 197  Q
    ||||||||||  | |||||  ||||| |||| ||||| ||||||| || |||||||||||| ||| |||||||  |||||||||| ||||    
T  21194087 attaggcgtgccccggtgtctgacatgtgtcgtgtccaacaccaatacctataattacactgaatgatgtgattttctcaaattactagc 21194176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 211
Target Start/End: Original strand, 38749565 - 38749630
Alignment:
Q  146 acaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtc 211  Q
    ||||||||||||||||||||| | |||||||| ||  | ||||||||||| |||||| | ||||||    
T  38749565 acaccaacacatataattacattgaattatgtcattttttcaaattattatcggtgtcgacatgtc 38749630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 202
Target Start/End: Original strand, 2577190 - 2577238
Alignment:
Q  154 acatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    |||||| ||||||||||||||||| ||  ||||||||||||| ||||||    
T  2577190 acatatgattacactaaattatgtcattttctcaaattattatcggtgt 2577238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 214
Target Start/End: Original strand, 15410450 - 15410518
Alignment:
Q  146 acaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    |||||||||||||| |||||||| ||| || | ||  ||| |||||||||||||||| ||| |||||||    
T  15410450 acaccaacacatatgattacactgaatcatataattttcttaaattattagcggtgtcggcgtgtcagt 15410518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 216
Target Start/End: Original strand, 28262408 - 28262468
Alignment:
Q  156 atataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtat 216  Q
    |||||||||| ||||||||||||||  ||||||||||| | || | ||||| |||||||||    
T  28262408 atataattaccctaaattatgtgattttctcaaattatcaacgttattggcgtgtcagtat 28262468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 6e-18; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 108 - 198
Target Start/End: Complemental strand, 21880247 - 21880157
Alignment:
Q  108 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcg 198  Q
    ||||||||||| ||||||| |||||| |||| ||||||||||| |||| | |||||||||| |||||||| ||  ||||||||||||||||    
T  21880247 attaggcgtgtcctggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtaattttctcaaattattagcg 21880157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 20549854 - 20549792
Alignment:
Q  140 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    ||||||||||| ||||||||||||||||| ||||| |||||  ||||||||||||||||||||    
T  20549854 tgtccgacaccgacacatataattacactgaattacgtgattttctcaaattattagcggtgt 20549792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 108 - 202
Target Start/End: Original strand, 27093377 - 27093471
Alignment:
Q  108 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    |||||| |||| || |||| ||||| ||||| ||||  ||||| || ||||||||||||||||||||||||||  ||| ||||||||||||||||    
T  27093377 attaggtgtgtcctagtgtcggacacatgtcgtgtctaacaccgacgcatataattacactaaattatgtgattttcttaaattattagcggtgt 27093471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 108 - 202
Target Start/End: Complemental strand, 27184924 - 27184830
Alignment:
Q  108 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    |||||| |||| || |||| ||||| ||||| ||||  ||||| || ||||||||||||||||||||||||||  ||| ||||||||||||||||    
T  27184924 attaggtgtgtcctagtgtcggacacatgtcgtgtctaacaccgacgcatataattacactaaattatgtgattttcttaaattattagcggtgt 27184830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 108 - 202
Target Start/End: Original strand, 32287427 - 32287521
Alignment:
Q  108 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    |||||| |||| | ||||| |||||  |||||||||||||||| ||||||||| || |||| |||||||||||  ||||| ||||||||||||||    
T  32287427 attaggtgtgtcccggtgtcggacacttgtcatgtccgacaccgacacatatacttgcactgaattatgtgattttctcagattattagcggtgt 32287521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 3721156 - 3721099
Alignment:
Q  140 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagc 197  Q
    ||||||||||| ||||||||||||| |||||||||||||||  |||||||||||||||    
T  3721156 tgtccgacaccgacacatataattatactaaattatgtgattttctcaaattattagc 3721099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 214
Target Start/End: Complemental strand, 15902879 - 15902811
Alignment:
Q  146 acaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    ||||| |||||||||||||||||||||||||||||  | |||||||||||  ||||| |||||||||||    
T  15902879 acaccgacacatataattacactaaattatgtgattttatcaaattattattggtgtcggcatgtcagt 15902811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 107 - 202
Target Start/End: Original strand, 42720853 - 42720948
Alignment:
Q  107 aattaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    |||||| ||||||| ||||||| ||| ||||  |||| |||||  ||||||||||||||| | |||||||||||  | ||||||||||||||||||    
T  42720853 aattagacgtgttccggtgttgtacacatgttgtgtcagacactgacacatataattacatttaattatgtgattttttcaaattattagcggtgt 42720948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 148 - 202
Target Start/End: Complemental strand, 8160471 - 8160417
Alignment:
Q  148 accaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    |||||||||||||||||||||||||||||| ||  ||| ||||||||||||||||    
T  8160471 accaacacatataattacactaaattatgtaattttcttaaattattagcggtgt 8160417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 128 - 214
Target Start/End: Complemental strand, 22484100 - 22484014
Alignment:
Q  128 ggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    |||||| ||||||||| |||||| ||||||||||||| ||| |||||||  ||  ||| |||||||||||||||| ||| |||||||    
T  22484100 ggacatgtgtcatgtctgacaccgacacatataattatactgaattatgcaattttctaaaattattagcggtgtcggcgtgtcagt 22484014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 108 - 202
Target Start/End: Complemental strand, 26733399 - 26733305
Alignment:
Q  108 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    |||||||||||||  || | ||||||  ||| ||||||||||| |||||| |||||| ||| |||||||||||  | ||||||||||||||||||    
T  26733399 attaggcgtgttcccgtatcggacatgcgtcgtgtccgacaccgacacatttaattagactgaattatgtgattttgtcaaattattagcggtgt 26733305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 152 - 214
Target Start/End: Complemental strand, 32308171 - 32308109
Alignment:
Q  152 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    ||||||| ||||||||| |||||||||||  |||||||||||||||||||| ||| |||||||    
T  32308171 acacatacaattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagt 32308109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 212
Target Start/End: Complemental strand, 1433554 - 1433445
Alignment:
Q  108 attaggcgtgttctggtgttggacatatgtcatgtccgacacca-----acacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    ||||| ||||| ||||||| ||||| ||||| |||||||||| |     |||||||||||||||| |||| |||||||  ||||||||||||| ||||||    
T  1433554 attagacgtgtcctggtgtcggacacatgtcttgtccgacacgacaccgacacatataattacaccaaatgatgtgattttctcaaattattaacggtgt 1433455  T
Q  203 tggcatgtca 212  Q
     ||| |||||    
T  1433454 cggcgtgtca 1433445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 216
Target Start/End: Complemental strand, 2948739 - 2948670
Alignment:
Q  147 caccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtat 216  Q
    |||| ||||||||||||||||||||||| |||||  ||| ||||||| |||||||| ||| |||||||||    
T  2948739 caccgacacatataattacactaaattacgtgattttctaaaattatcagcggtgtcggcgtgtcagtat 2948670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 195
Target Start/End: Complemental strand, 5233686 - 5233637
Alignment:
Q  146 acaccaacacatataattacactaaattatgtgatgatctcaaattatta 195  Q
    |||||||||||||||||||||||| ||||||||||  |||||||||||||    
T  5233686 acaccaacacatataattacactagattatgtgattttctcaaattatta 5233637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 202
Target Start/End: Complemental strand, 5835321 - 5835248
Alignment:
Q  129 gacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    |||| |||||||||| |||||| ||||||||||||||||| |||||||| ||  ||||||| |||||| |||||    
T  5835321 gacacatgtcatgtctgacaccgacacatataattacactgaattatgttattttctcaaactattagtggtgt 5835248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 197
Target Start/End: Original strand, 7328691 - 7328744
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagc 197  Q
    ||||||| |||||||||||||||||||||||||| ||  |||||||||||||||    
T  7328691 cgacaccgacacatataattacactaaattatgttattttctcaaattattagc 7328744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 212
Target Start/End: Complemental strand, 25482006 - 25481893
Alignment:
Q  99 actctttaaattaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcg 198  Q
    ||||||| ||||| |||||||    ||| ||||| || || |||||||||||||||| | |||||||||| |||||||||||  | |||||||||||||     
T  25482006 actctttgaattaagcgtgtttcaatgtcggacacatatcgtgtccgacaccaacacttgtaattacactgaattatgtgattttttcaaattattagct 25481907  T
Q  199 gtgttggcatgtca 212  Q
    |||| ||| |||||    
T  25481906 gtgtcggcgtgtca 25481893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 18213029 - 18213069
Alignment:
Q  140 tgtccgacaccaacacatataattacactaaattatgtgat 180  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  18213029 tgtccgacaccgacacatataattacactaaattatgtgat 18213069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 195
Target Start/End: Complemental strand, 38143286 - 38143231
Alignment:
Q  140 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattatta 195  Q
    |||| |||||||||||||||||||||| |||||||||||||  | |||||||||||    
T  38143286 tgtctgacaccaacacatataattacattaaattatgtgattttttcaaattatta 38143231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 122 - 180
Target Start/End: Complemental strand, 15680890 - 15680832
Alignment:
Q  122 ggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgat 180  Q
    ||||| |||||  |||| ||||||||||| |||| ||||||||||||||||||||||||    
T  15680890 ggtgtcggacacgtgtcgtgtccgacaccgacacttataattacactaaattatgtgat 15680832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 214
Target Start/End: Original strand, 22602710 - 22602780
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    ||||||| ||||||||||||||||| |||||||||||  |||||||| |||  |||||| ||| |||||||    
T  22602710 cgacaccgacacatataattacactgaattatgtgattttctcaaataatttacggtgtcggcgtgtcagt 22602780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 152 - 214
Target Start/End: Complemental strand, 22868093 - 22868031
Alignment:
Q  152 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    ||||||||||||||||| |||||||||||  ||||| |||||||| ||||| ||| |||||||    
T  22868093 acacatataattacactgaattatgtgattttctcatattattagtggtgtcggcgtgtcagt 22868031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 198
Target Start/End: Complemental strand, 9482996 - 9482939
Alignment:
Q  141 gtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcg 198  Q
    |||||||||| ||||||||||||||||| |||| ||||||  ||||||||||| ||||    
T  9482996 gtccgacaccgacacatataattacactgaattgtgtgattttctcaaattatcagcg 9482939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 202
Target Start/End: Complemental strand, 19206108 - 19206051
Alignment:
Q  145 gacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    |||||| ||||||||||||| | | |||||||||||  ||||||||||||||||||||    
T  19206108 gacaccgacacatataattataatgaattatgtgattttctcaaattattagcggtgt 19206051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 202
Target Start/End: Original strand, 29787373 - 29787427
Alignment:
Q  146 acaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    |||||||||||||  |||||||| |||||||||||  ||||||||||||||||||||    
T  29787373 acaccaacacata--attacactgaattatgtgattttctcaaattattagcggtgt 29787427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 208
Target Start/End: Complemental strand, 5548727 - 5548671
Alignment:
Q  152 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcat 208  Q
    ||||||||||||||||| |||||| ||||  ||||||||||| |||||||| |||||    
T  5548727 acacatataattacactgaattatttgattttctcaaattatcagcggtgtcggcat 5548671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 192
Target Start/End: Complemental strand, 17307952 - 17307904
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgatgatctcaaatta 192  Q
    ||||||||||||||||||||||||| |||||||| ||  ||||||||||    
T  17307952 cgacaccaacacatataattacactgaattatgttattttctcaaatta 17307904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 200
Target Start/End: Complemental strand, 17851482 - 17851434
Alignment:
Q  152 acacatataattacactaaattatgtgatgatctcaaattattagcggt 200  Q
    ||||||||||||||||| |||||||||||  ||| ||||||||||||||    
T  17851482 acacatataattacactgaattatgtgattttctaaaattattagcggt 17851434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 202
Target Start/End: Original strand, 33384584 - 33384640
Alignment:
Q  146 acaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    ||||||||||||||||||||||||||||||  |||  ||||| ||||||| ||||||    
T  33384584 acaccaacacatataattacactaaattataggattttctcagattattaacggtgt 33384640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 195
Target Start/End: Complemental strand, 16341555 - 16341504
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgatgatctcaaattatta 195  Q
    |||||||  |||||||||||||||| |||||||||||  |||||||||||||    
T  16341555 cgacaccggcacatataattacacttaattatgtgattttctcaaattatta 16341504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 195
Target Start/End: Original strand, 35297672 - 35297723
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgatgatctcaaattatta 195  Q
    ||||||||||||||||||||| | | |||||||||||  |||||||||||||    
T  35297672 cgacaccaacacatataattataatgaattatgtgattttctcaaattatta 35297723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 202
Target Start/End: Complemental strand, 598303 - 598209
Alignment:
Q  108 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    ||||||||||| | ||||| |||||  |||| |||| |||||| |||| || ||||||| | ||||| |||||  ||| ||||||||||||||||    
T  598303 attaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacacttacaattacatttaattacgtgattttcttaaattattagcggtgt 598209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 214
Target Start/End: Original strand, 6630920 - 6630982
Alignment:
Q  152 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    ||||||||||||||||| ||||| ||||   |||||||||||||| ||||| ||| |||||||    
T  6630920 acacatataattacactgaattaagtgactttctcaaattattagtggtgtcggcgtgtcagt 6630982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 8090021 - 8090083
Alignment:
Q  140 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    ||||||||||||||||||| | ||||||| ||||| |||||  |||||||||| ||| |||||    
T  8090021 tgtccgacaccaacacatacagttacactgaattacgtgatattctcaaattactagtggtgt 8090083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 19992060 - 19992002
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    ||||||| |||| |||||||||||| || ||||||||  ||||||||||||||| ||||    
T  19992060 cgacaccgacacttataattacactgaaatatgtgattttctcaaattattagctgtgt 19992002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 214
Target Start/End: Complemental strand, 27945100 - 27945030
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    ||||||| |||| | |||||||||| |||||||| ||  |||||||||||||| ||||| ||| |||||||    
T  27945100 cgacaccgacacttgtaattacactgaattatgtaattttctcaaattattagtggtgtcggcgtgtcagt 27945030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 28155633 - 28155571
Alignment:
Q  140 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    ||||||||||| |||| | |||||||||  |||||||| ||  ||||||||||||||||||||    
T  28155633 tgtccgacaccgacacttgtaattacaccgaattatgtaattttctcaaattattagcggtgt 28155571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 49107879 - 49107822
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    ||||||| ||||||||||| ||||| ||||||||| |  ||||||||||||||||||||    
T  49107879 cgacaccgacacatataatcacactcaattatgtg-ttttctcaaattattagcggtgt 49107822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 216
Target Start/End: Original strand, 2425736 - 2425805
Alignment:
Q  147 caccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtat 216  Q
    |||| ||||||||| || |||| |||||||||||  ||||||||||||| |||||  ||| |||||||||    
T  2425736 caccgacacatatagttccacttaattatgtgattttctcaaattattaacggtgccggcgtgtcagtat 2425805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 205
Target Start/End: Complemental strand, 37870956 - 37870891
Alignment:
Q  140 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttgg 205  Q
    ||||||||||| ||||| |||||||||| |||| |||||||  |||||||| |||||  |||||||    
T  37870956 tgtccgacaccgacacacataattacacgaaatcatgtgattttctcaaatgattagtagtgttgg 37870891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 180
Target Start/End: Complemental strand, 39138524 - 39138467
Alignment:
Q  123 gtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgat 180  Q
    ||||| ||||| | || ||||||||||| ||| ||||||||||||| |||||||||||    
T  39138524 gtgttagacatgtatcgtgtccgacaccgacatatataattacactgaattatgtgat 39138467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 198
Target Start/End: Complemental strand, 1401094 - 1401030
Alignment:
Q  134 atgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcg 198  Q
    ||||| |||| |||||| | || |||||||||||| ||||||||||   ||||||||||||||||    
T  1401094 atgtcgtgtcggacaccgatacttataattacactgaattatgtgagtttctcaaattattagcg 1401030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 198
Target Start/End: Complemental strand, 2424659 - 2424619
Alignment:
Q  158 ataattacactaaattatgtgatgatctcaaattattagcg 198  Q
    ||||||||||| |||||||||||  ||||||||||||||||    
T  2424659 ataattacactgaattatgtgattttctcaaattattagcg 2424619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 216
Target Start/End: Original strand, 8046030 - 8046099
Alignment:
Q  143 ccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtat 216  Q
    |||| ||||||||| ||||||||||| ||||    |||  |||||||||||||| ||||||||| |||||||||    
T  8046030 ccgataccaacacagataattacactgaatt----gattttctcaaattattagtggtgttggcgtgtcagtat 8046099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 202
Target Start/End: Complemental strand, 23191945 - 23191897
Alignment:
Q  154 acatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    |||| |||||||||| || ||||||||  ||||||||||||||||||||    
T  23191945 acatgtaattacactgaaatatgtgattttctcaaattattagcggtgt 23191897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 212
Target Start/End: Complemental strand, 24339701 - 24339633
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtca 212  Q
    ||||||| |||| | |||||||||| |||||||||||  | ||||||||||||| |||| ||| |||||    
T  24339701 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtca 24339633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 195
Target Start/End: Original strand, 27732207 - 27732290
Alignment:
Q  107 aattaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattatta 195  Q
    ||||||| |||| ||||||| ||||||||||| |||     ||| ||||||||||||||||| |||||||| ||  ||| |||||||||    
T  27732207 aattaggtgtgtcctggtgtcggacatatgtcgtgt-----accgacacatataattacactgaattatgtaattttcttaaattatta 27732290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 180
Target Start/End: Complemental strand, 41020591 - 41020519
Alignment:
Q  108 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgat 180  Q
    ||||| ||||| | |||||| || || |||| ||| | ||||| || ||||||||||||||||||||||||||    
T  41020591 attagacgtgtcccggtgttagatatgtgtcgtgttcaacaccgacgcatataattacactaaattatgtgat 41020519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 6e-18; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 140 - 214
Target Start/End: Complemental strand, 31018653 - 31018579
Alignment:
Q  140 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    ||||||||||| |||| |||||||||||||||| |||||||  ||| |||||||||||||||||||| |||||||    
T  31018653 tgtccgacaccgacacctataattacactaaatcatgtgattttctgaaattattagcggtgttggcgtgtcagt 31018579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 152 - 213
Target Start/End: Original strand, 37411252 - 37411313
Alignment:
Q  152 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcag 213  Q
    ||||||||||| ||||| |||||||||||  |||||||||||||||||||| ||||||||||    
T  37411252 acacatataatcacactgaattatgtgattttctcaaattattagcggtgtcggcatgtcag 37411313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 5367287 - 5367199
Alignment:
Q  108 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattag 196  Q
    ||||||||||| | || || ||| || |||| ||||||||||| ||||||||||||||||| |||||||||||   |||||||||||||    
T  5367287 attaggcgtgtcccggagtcggatatgtgtcgtgtccgacaccgacacatataattacactgaattatgtgatttcctcaaattattag 5367199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 152 - 211
Target Start/End: Complemental strand, 21616813 - 21616754
Alignment:
Q  152 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtc 211  Q
    ||||||||||||||||| |||||||||||  |||||||||||||||||||| ||| ||||    
T  21616813 acacatataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtc 21616754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 108 - 202
Target Start/End: Original strand, 2438683 - 2438777
Alignment:
Q  108 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    ||||||||||| | ||||| |||||| |||| ||||||||||| |||| | |||||||||| |||||||||||  | | ||||||||||| ||||    
T  2438683 attaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgattttttgaaattattagctgtgt 2438777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 108 - 214
Target Start/End: Original strand, 30404814 - 30404920
Alignment:
Q  108 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggca 207  Q
    ||||||| ||| ||||||| |||||| |||| |||||||| || |||| | |||||||||| |||||||||||  | ||||||||||| | |||| |||     
T  30404814 attaggcatgtcctggtgtcggacatgtgtcgtgtccgacgccgacacttgtaattacactgaattatgtgattttttcaaattattaaccgtgtcggcg 30404913  T
Q  208 tgtcagt 214  Q
    |||||||    
T  30404914 tgtcagt 30404920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 44860379 - 44860321
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    ||||||| ||||||||||||||||| ||||||| |||  ||||||||||||||||||||    
T  44860379 cgacaccgacacatataattacactgaattatgcgattttctcaaattattagcggtgt 44860321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 214
Target Start/End: Complemental strand, 18276579 - 18276510
Alignment:
Q  145 gacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    |||||| ||||| ||||||||||| ||||| |||||  |||||||||||||||||||| ||||| |||||    
T  18276579 gacaccgacacacataattacactgaattaagtgattttctcaaattattagcggtgtcggcatatcagt 18276510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 202
Target Start/End: Complemental strand, 23718087 - 23718027
Alignment:
Q  142 tccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    |||| |||| ||||||||||||||||| ||||||||||   ||||||||||||||||||||    
T  23718087 tccgtcaccgacacatataattacactgaattatgtgactttctcaaattattagcggtgt 23718027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 202
Target Start/End: Complemental strand, 24105759 - 24105699
Alignment:
Q  142 tccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    |||| |||| ||||||||||||||||| ||||||||||   ||||||||||||||||||||    
T  24105759 tccgtcaccgacacatataattacactgaattatgtgactttctcaaattattagcggtgt 24105699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 200
Target Start/End: Original strand, 34691801 - 34691861
Alignment:
Q  140 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggt 200  Q
    ||||||||||| ||||||||||||||||| |||||| ||||  | ||||||||||||||||    
T  34691801 tgtccgacaccgacacatataattacactgaattatatgattttatcaaattattagcggt 34691861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 200
Target Start/End: Original strand, 34714213 - 34714273
Alignment:
Q  140 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggt 200  Q
    ||||||||||| ||||||||||||||||| |||||| ||||  | ||||||||||||||||    
T  34714213 tgtccgacaccgacacatataattacactgaattatatgattttatcaaattattagcggt 34714273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 210
Target Start/End: Complemental strand, 36281734 - 36281678
Alignment:
Q  154 acatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgt 210  Q
    |||||| ||||||||||||||||||||  ||||||||||||| |||| |||||||||    
T  36281734 acatatgattacactaaattatgtgattttctcaaattattaacggtattggcatgt 36281678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 213
Target Start/End: Complemental strand, 39279732 - 39279665
Alignment:
Q  146 acaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcag 213  Q
    ||||| ||||||||||||||||| |||||| ||||  ||||| ||||||| |||||||||| ||||||    
T  39279732 acaccgacacatataattacactgaattatttgattttctcatattattaacggtgttggcgtgtcag 39279665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 153 - 203
Target Start/End: Original strand, 2665897 - 2665947
Alignment:
Q  153 cacatataattacactaaattatgtgatgatctcaaattattagcggtgtt 203  Q
    ||||||||||||||||||||||||||||  ||| |||||||||| ||||||    
T  2665897 cacatataattacactaaattatgtgattttctaaaattattagtggtgtt 2665947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 146 - 216
Target Start/End: Original strand, 18420436 - 18420506
Alignment:
Q  146 acaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtat 216  Q
    ||||| |||| ||||||| || | |||||||||||  ||||||||||||||| |||||||| |||||||||    
T  18420436 acaccgacacttataattgcattgaattatgtgattttctcaaattattagcagtgttggcgtgtcagtat 18420506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 152 - 214
Target Start/End: Complemental strand, 35449564 - 35449502
Alignment:
Q  152 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    ||||||||||||||||| |||| ||||||  ||||||||||||| | |||||||| |||||||    
T  35449564 acacatataattacactgaattctgtgattttctcaaattattaacagtgttggcttgtcagt 35449502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 158 - 216
Target Start/End: Original strand, 36409641 - 36409699
Alignment:
Q  158 ataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtat 216  Q
    |||||||||||||||||||||||  | ||||||||| |||||||| ||||||| |||||    
T  36409641 ataattacactaaattatgtgattttttcaaattatcagcggtgtcggcatgtgagtat 36409699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 108 - 214
Target Start/End: Original strand, 38117123 - 38117229
Alignment:
Q  108 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggca 207  Q
    ||||||||||| | ||||| |||||  |||  |||||||||||||||| | |||||||||  || ||||||||  | ||||||||||||| |||| |||     
T  38117123 attaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccaacacttgtaattacaccgaagtatgtgattttttcaaattattagctgtgtcggcg 38117222  T
Q  208 tgtcagt 214  Q
    |||||||    
T  38117223 tgtcagt 38117229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 204
Target Start/End: Complemental strand, 18571076 - 18570971
Alignment:
Q  99 actctttaaattaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcg 198  Q
    |||||| | ||||||||||| ||||||| ||| || | || ||| ||||||  |||||||| |||||| | |||||||| ||  ||||||||||||| ||    
T  18571076 actcttcagattaggcgtgtcctggtgtcggatatgtatcgtgttcgacactgacacatatgattacattgaattatgtcattttctcaaattattatcg 18570977  T
Q  199 gtgttg 204  Q
    ||||||    
T  18570976 gtgttg 18570971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 20242723 - 20242763
Alignment:
Q  140 tgtccgacaccaacacatataattacactaaattatgtgat 180  Q
    ||||||||||| ||||||||||||||||| |||||||||||    
T  20242723 tgtccgacaccgacacatataattacactgaattatgtgat 20242763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 20922924 - 20922964
Alignment:
Q  140 tgtccgacaccaacacatataattacactaaattatgtgat 180  Q
    ||||||||||  |||||||||||||||||||||||||||||    
T  20922924 tgtccgacacagacacatataattacactaaattatgtgat 20922964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 216
Target Start/End: Complemental strand, 21148499 - 21148439
Alignment:
Q  156 atataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtat 216  Q
    ||||||||||  |||||||||||||  ||||||||||| | || |||||||||||||||||    
T  21148499 atataattaccataaattatgtgattttctcaaattatcaacgttgttggcatgtcagtat 21148439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 214
Target Start/End: Original strand, 21782832 - 21782888
Alignment:
Q  158 ataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    ||||||||||| |||||||||||  ||||||||||||||| |||| ||| |||||||    
T  21782832 ataattacactgaattatgtgattttctcaaattattagcagtgtcggcgtgtcagt 21782888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 202
Target Start/End: Complemental strand, 28677958 - 28677910
Alignment:
Q  154 acatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    ||||||||||||||| |||||||||||  | ||||||||||||||||||    
T  28677958 acatataattacactgaattatgtgattttttcaaattattagcggtgt 28677910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 180
Target Start/End: Original strand, 34784982 - 34785018
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgat 180  Q
    ||||||| |||||||||||||||||||||||||||||    
T  34784982 cgacaccgacacatataattacactaaattatgtgat 34785018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 195
Target Start/End: Original strand, 40361745 - 40361805
Alignment:
Q  135 tgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattatta 195  Q
    |||| |||| |||||||||| |||||||||||||||||||||| ||  | |||||||||||    
T  40361745 tgtcgtgtctgacaccaacagatataattacactaaattatgtaattttttcaaattatta 40361805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 195
Target Start/End: Original strand, 30527603 - 30527646
Alignment:
Q  152 acacatataattacactaaattatgtgatgatctcaaattatta 195  Q
    |||||||||||||||||||||||| ||||  |||||||||||||    
T  30527603 acacatataattacactaaattatatgattttctcaaattatta 30527646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 199
Target Start/End: Original strand, 18889592 - 18889646
Alignment:
Q  145 gacaccaacacatataattacactaaattatgtgatgatctcaaattattagcgg 199  Q
    |||||| |||||||| |||||||| |||||||||||  |||||| ||||||||||    
T  18889592 gacaccgacacatatgattacactgaattatgtgattttctcaatttattagcgg 18889646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 202
Target Start/End: Complemental strand, 31808128 - 31808078
Alignment:
Q  152 acacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    ||||||||||||||||| |||||||||||  | | ||||||||||||||||    
T  31808128 acacatataattacactgaattatgtgattttgttaaattattagcggtgt 31808078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 206
Target Start/End: Original strand, 34993935 - 34994038
Alignment:
Q  97 acactctttaaattaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattag 196  Q
    |||||| || |||||||||||| |  |||| ||||| ||||| ||| ||||||  ||||||||||||||| | |||||||      | ||||||||||||    
T  34993935 acactccttgaattaggcgtgtcccagtgtcggacacatgtcgtgttcgacactgacacatataattacattgaattatg------tttcaaattattag 34994028  T
Q  197 cggtgttggc 206  Q
    ||||||||||    
T  34994029 cggtgttggc 34994038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 214
Target Start/End: Complemental strand, 37559072 - 37558966
Alignment:
Q  108 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggca 207  Q
    |||| |||||| | ||||| |||||  ||||| |||||||||| |||| | |||||||| | |||||||||||  |  |||||||||||| |||| |||     
T  37559072 attaagcgtgtaccggtgtcggacacgtgtcaagtccgacaccgacacttgtaattacattgaattatgtgatttttacaaattattagctgtgtcggcg 37558973  T
Q  208 tgtcagt 214  Q
    |||||||    
T  37558972 tgtcagt 37558966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 202
Target Start/End: Original strand, 42832277 - 42832334
Alignment:
Q  145 gacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    |||||| |||| |||||||||||| || ||||| ||  ||||||||||||||||||||    
T  42832277 gacaccgacacttataattacactgaaatatgtaattttctcaaattattagcggtgt 42832334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 180
Target Start/End: Complemental strand, 18622665 - 18622629
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgat 180  Q
    |||||||||||| |||||||||||| |||||||||||    
T  18622665 cgacaccaacacgtataattacactgaattatgtgat 18622629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 18840977 - 18841065
Alignment:
Q  108 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattag 196  Q
    |||||| |||| | ||||| |||||| |||| |||| |||||| |||| | |||||||||| |||||||| ||  | ||||||||||||    
T  18840977 attaggtgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacacttgtaattacacttaattatgtaattttttcaaattattag 18841065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 200
Target Start/End: Complemental strand, 23921316 - 23921256
Alignment:
Q  140 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggt 200  Q
    ||||||||||||| |  |||||||||||| |||||||| ||  ||||||||||||| ||||    
T  23921316 tgtccgacaccaatatttataattacactgaattatgtaattttctcaaattattaacggt 23921256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 195
Target Start/End: Original strand, 29176472 - 29176544
Alignment:
Q  123 gtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattatta 195  Q
    |||| |||||| || | ||||| |||||||||| |||||||||||| ||||||||||   | |||||||||||    
T  29176472 gtgtcggacatgtgccgtgtccaacaccaacacttataattacactgaattatgtgaccttttcaaattatta 29176544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 9e-17; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 152 - 212
Target Start/End: Original strand, 32804548 - 32804608
Alignment:
Q  152 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtca 212  Q
    |||||||||||||||||||||||||||||  ||||||||||||| |||||| |||||||||    
T  32804548 acacatataattacactaaattatgtgattttctcaaattattaacggtgtcggcatgtca 32804608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 108 - 180
Target Start/End: Original strand, 40993299 - 40993371
Alignment:
Q  108 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgat 180  Q
    ||||||||||| | ||||| |||||| |||| ||||||||||| ||||||||||||||||| |||||||||||    
T  40993299 attaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattatgtgat 40993371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 140 - 200
Target Start/End: Original strand, 49505150 - 49505210
Alignment:
Q  140 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggt 200  Q
    ||||||||||  |||||||||||||||||||||||||||||  ||||||||||||||||||    
T  49505150 tgtccgacactgacacatataattacactaaattatgtgattttctcaaattattagcggt 49505210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 7928513 - 7928451
Alignment:
Q  140 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    ||||||||||| ||||||||||||||||| |||||||||||  | ||||||||||||||||||    
T  7928513 tgtccgacaccgacacatataattacactgaattatgtgattttttcaaattattagcggtgt 7928451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 11313800 - 11313858
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    |||||| ||||||||||||||||||||||||||||||  ||||||||||||||| ||||    
T  11313800 cgacactaacacatataattacactaaattatgtgattttctcaaattattagcagtgt 11313858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 212
Target Start/End: Original strand, 8039835 - 8039903
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtca 212  Q
    ||||||| ||||||||||||||||| |||||| | ||  |||||||||||||||||||||||| |||||    
T  8039835 cgacaccgacacatataattacactgaattatataattttctcaaattattagcggtgttggcgtgtca 8039903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 212
Target Start/End: Complemental strand, 8383320 - 8383248
Alignment:
Q  140 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtca 212  Q
    ||||||||||| |||| |||||||||||| |||||| ||||  |||||||||||||||||||| ||| |||||    
T  8383320 tgtccgacaccgacacttataattacactgaattatatgattttctcaaattattagcggtgtcggcgtgtca 8383248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 214
Target Start/End: Original strand, 25948887 - 25948957
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    |||||||||||| |||||||||||| |||||||||||  | ||||||||||||| || | |||||||||||    
T  25948887 cgacaccaacacttataattacactgaattatgtgattttttcaaattattagccgtatcggcatgtcagt 25948957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 179
Target Start/End: Complemental strand, 3631777 - 3631708
Alignment:
Q  110 taggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtga 179  Q
    ||||||||| ||||||| |||||| |||| ||||||||||   |||||||||||||||| ||||||||||    
T  3631777 taggcgtgtcctggtgtcggacatgtgtcgtgtccgacactggcacatataattacactgaattatgtga 3631708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 205
Target Start/End: Complemental strand, 4201459 - 4201394
Alignment:
Q  140 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttgg 205  Q
    |||| |||||||||| ||||||||||||| |||||||||||  | ||||||||||| |||||||||    
T  4201459 tgtcggacaccaacatatataattacacttaattatgtgattttttcaaattattaacggtgttgg 4201394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 203
Target Start/End: Complemental strand, 45451634 - 45451553
Alignment:
Q  122 ggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgtt 203  Q
    ||||| |||||| |||| ||||||||||| |||||||| |||| ||| || ||||||||  ||||||||||||||| |||||    
T  45451634 ggtgtcggacatgtgtcgtgtccgacaccgacacatattattatactgaagtatgtgattttctcaaattattagcagtgtt 45451553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 144 - 212
Target Start/End: Complemental strand, 10455849 - 10455781
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtca 212  Q
    ||||||||||||||||||||||||| | |||| ||||  ||||| ||||||||| |||||||| |||||    
T  10455849 cgacaccaacacatataattacacttagttatatgattttctcatattattagcagtgttggcgtgtca 10455781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 144 - 180
Target Start/End: Original strand, 15314876 - 15314912
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgat 180  Q
    |||||||||||||||||||||||||||||||||||||    
T  15314876 cgacaccaacacatataattacactaaattatgtgat 15314912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 55401170 - 55401082
Alignment:
Q  108 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattag 196  Q
    |||||||||||   ||||| |||||  |||| ||||||||||| |||| | ||||||||||||||||||||||  | ||||||||||||    
T  55401170 attaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattattag 55401082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 202
Target Start/End: Original strand, 8789541 - 8789608
Alignment:
Q  135 tgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    |||| ||||||||||| ||||||||||||||||  |||||||||||  ||||||||||| ||| ||||    
T  8789541 tgtcgtgtccgacaccgacacatataattacacggaattatgtgattttctcaaattataagccgtgt 8789608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 130 - 212
Target Start/End: Complemental strand, 8842402 - 8842321
Alignment:
Q  130 acatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtca 212  Q
    |||| |||| |||| |||||| ||| |||||||||||| ||||||||||||  ||  |||||||||||||||| |||||||||    
T  8842402 acatgtgtcgtgtctgacaccgacatatataattacaccaaattatgtgattttc-aaaattattagcggtgtcggcatgtca 8842321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 198
Target Start/End: Complemental strand, 11666003 - 11665949
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcg 198  Q
    ||||||| |||||||||||||||||||||| ||||||  | ||||||||||||||    
T  11666003 cgacaccgacacatataattacactaaattgtgtgattttatcaaattattagcg 11665949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 16192750 - 16192808
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    ||||| ||||||||||||||||||| |||||||| ||  ||||||||||||| ||||||    
T  16192750 cgacatcaacacatataattacactgaattatgttattttctcaaattattaacggtgt 16192808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 35223006 - 35222961
Alignment:
Q  135 tgtcatgtccgacaccaacacatataattacactaaattatgtgat 180  Q
    |||||||||||||||| ||||||||||||||| | |||||||||||    
T  35223006 tgtcatgtccgacaccgacacatataattacattgaattatgtgat 35222961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 195
Target Start/End: Complemental strand, 25093582 - 25093510
Alignment:
Q  123 gtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattatta 195  Q
    |||| |||||| |||  ||||||||||| ||||||||||||||||| |||| ||||||  |||||||| ||||    
T  25093582 gtgtcggacatgtgttgtgtccgacaccgacacatataattacactgaattgtgtgattttctcaaatcatta 25093510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 202
Target Start/End: Original strand, 27277852 - 27277896
Alignment:
Q  158 ataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    |||||||||||||||||||||||  ||||||||||||||| ||||    
T  27277852 ataattacactaaattatgtgattttctcaaattattagcagtgt 27277896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 214
Target Start/End: Original strand, 4987294 - 4987361
Alignment:
Q  147 caccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    ||||||||| | |||||||||| |||||||||||  | ||||||||||||| |||| ||| |||||||    
T  4987294 caccaacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagt 4987361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 191
Target Start/End: Original strand, 6780415 - 6780466
Alignment:
Q  140 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaatt 191  Q
    ||||||||||||||||||||||||||||| || || |||||  |||||||||    
T  6780415 tgtccgacaccaacacatataattacactgaactacgtgattttctcaaatt 6780466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 1509598 - 1509540
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    ||||||| |||| | ||||||||||||||||||||||  | ||||||||||||| ||||    
T  1509598 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgt 1509540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 202
Target Start/End: Original strand, 10690274 - 10690320
Alignment:
Q  156 atataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    ||||||||||||| |||||||||||  ||||| ||||||||||||||    
T  10690274 atataattacactgaattatgtgattttctcagattattagcggtgt 10690320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 214
Target Start/End: Complemental strand, 10955047 - 10954941
Alignment:
Q  108 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggca 207  Q
    ||||||||||| |  |||| |||||  |||| ||||||||||| |||| | | |||||||| |||||||||||  | ||||||||||||  |||| |||     
T  10955047 attaggcgtgtcccagtgtcggacacgtgtcgtgtccgacaccgacacttgtgattacactgaattatgtgattttttcaaattattagttgtgtcggcg 10954948  T
Q  208 tgtcagt 214  Q
    |||||||    
T  10954947 tgtcagt 10954941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 212
Target Start/End: Complemental strand, 25064954 - 25064900
Alignment:
Q  158 ataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtca 212  Q
    |||||||||||||||||||||||  | |||||| ||||||||||| ||| |||||    
T  25064954 ataattacactaaattatgtgattttttcaaatcattagcggtgtcggcgtgtca 25064900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 214
Target Start/End: Complemental strand, 28678362 - 28678292
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    ||||||| ||||||| ||||| |||||||||||||||  | | ||||||||||| | || |||||||||||    
T  28678362 cgacaccgacacatacaattatactaaattatgtgattttattaaattattagcagcgtcggcatgtcagt 28678292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 202
Target Start/End: Original strand, 34307788 - 34307838
Alignment:
Q  152 acacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    |||| |||||||||||| || ||||||||  ||||||||||||||||||||    
T  34307788 acacttataattacactgaaatatgtgattttctcaaattattagcggtgt 34307838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 216
Target Start/End: Complemental strand, 11610561 - 11610508
Alignment:
Q  163 tacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtat 216  Q
    |||||| |||||||||||  | | |||||||||||||||||||| |||||||||    
T  11610561 tacactgaattatgtgatttttttaaattattagcggtgttggcgtgtcagtat 11610508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 211
Target Start/End: Complemental strand, 12704056 - 12703999
Alignment:
Q  154 acatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtc 211  Q
    ||||||||||||||| ||||||||| |  |||||||||||||| ||||| ||| ||||    
T  12704056 acatataattacactgaattatgtgcttttctcaaattattagtggtgtcggcgtgtc 12703999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 214
Target Start/End: Complemental strand, 21720822 - 21720753
Alignment:
Q  146 acaccaacacatataa-ttacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    |||||| ||||||||| ||||||| ||||||| |||  ||||||||||||| |||||| ||| |||||||    
T  21720822 acaccaccacatataaattacactgaattatgagatattctcaaattattatcggtgtcggcgtgtcagt 21720753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 180
Target Start/End: Original strand, 24633364 - 24633437
Alignment:
Q  107 aattaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgat 180  Q
    |||||||||||| | |||||| ||||  |||| ||||| ||||| ||||||||||||||| | ||||| |||||    
T  24633364 aattaggcgtgtaccggtgttagacaagtgtcgtgtccaacaccgacacatataattacattgaattacgtgat 24633437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 200
Target Start/End: Complemental strand, 38731278 - 38731221
Alignment:
Q  143 ccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggt 200  Q
    |||||||| |||||||||| |||||| |||||||||||  | | ||||||||||||||    
T  38731278 ccgacaccgacacatataactacactgaattatgtgattttttaaaattattagcggt 38731221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 216
Target Start/End: Complemental strand, 7171596 - 7171489
Alignment:
Q  108 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggca 207  Q
    |||||||||||   ||||| |||||  |||| |||||||||||||||| | |||||||||  |||||| ||||  | ||||||||  ||| |||| ||||    
T  7171596 attaggcgtgtcgcggtgtcggacacgtgtcgtgtccgacaccaacacttgtaattacaccgaattatatgat-ttttcaaattacaagctgtgtcggca 7171498  T
Q  208 tgtcagtat 216  Q
    |||||||||    
T  7171497 tgtcagtat 7171489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 214
Target Start/End: Original strand, 8587015 - 8587091
Alignment:
Q  138 catgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    ||||||||||||| |||| | |||||||||| |||||||||||  | |||||||| |||  |||| ||| |||||||    
T  8587015 catgtccgacaccgacacttgtaattacacttaattatgtgattttttcaaattactagatgtgtcggcgtgtcagt 8587091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 216
Target Start/End: Original strand, 13620772 - 13620836
Alignment:
Q  152 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtat 216  Q
    |||||||||| | |||| ||| |||||||  |||||||||| ||||||||| | |||||||||||    
T  13620772 acacatataactgcactgaatcatgtgattttctcaaattactagcggtgtcgacatgtcagtat 13620836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 214
Target Start/End: Original strand, 24205004 - 24205111
Alignment:
Q  107 aattaggcgtgttctggtgttggacatatgtca-tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttgg 205  Q
    |||||||||||| ||||||| |||||   |||| |||||||||| | ||| ||||||||||||  ||||||| ||  ||||||||||||| | |||| ||    
T  24205004 aattaggcgtgtcctggtgtcggacacgcgtcagtgtccgacacga-cacttataattacactgtattatgtcattttctcaaattattatccgtgtcgg 24205102  T
Q  206 catgtcagt 214  Q
    | |||||||    
T  24205103 cgtgtcagt 24205111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 214
Target Start/End: Complemental strand, 25775602 - 25775497
Alignment:
Q  108 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatga-tctcaaattattagcggtgttggc 206  Q
    ||||||||||| ||||||| |||||   | | ||||||||||| |||| | |||||||||| ||||||||||| | | |||||||||||   ||||||||    
T  25775602 attaggcgtgtcctggtgtcggacac--gacgtgtccgacaccgacacttgtaattacactgaattatgtgattattttcaaattattaaatgtgttggc 25775505  T
Q  207 atgtcagt 214  Q
     |||||||    
T  25775504 gtgtcagt 25775497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 4e-16; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 140 - 211
Target Start/End: Original strand, 13844592 - 13844663
Alignment:
Q  140 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtc 211  Q
    ||||||||||| ||||||||||||||||| |||||||||||  ||||||||||||||| |||| ||| ||||    
T  13844592 tgtccgacaccgacacatataattacactcaattatgtgattttctcaaattattagcagtgtcggcgtgtc 13844663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 195
Target Start/End: Original strand, 33405348 - 33405435
Alignment:
Q  108 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattatta 195  Q
    ||||| ||||| | |||||  ||||| |||| ||||||||||| ||||||||||||||||||||||||||| |  |||||||||||||    
T  33405348 attagccgtgtccaggtgtcagacatgtgtcgtgtccgacaccgacacatataattacactaaattatgtgtttttctcaaattatta 33405435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 34897148 - 34897086
Alignment:
Q  140 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    ||||||||| | ||||||||||||||||| |||||||||||  ||||||||||||||||||||    
T  34897148 tgtccgacatcgacacatataattacactgaattatgtgattttctcaaattattagcggtgt 34897086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 153 - 211
Target Start/End: Original strand, 39954288 - 39954346
Alignment:
Q  153 cacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtc 211  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||| ||| ||||    
T  39954288 cacatataattacactaaattatgtgattttctcaaattattagcggtgtcggcgtgtc 39954346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 152 - 208
Target Start/End: Original strand, 20785473 - 20785529
Alignment:
Q  152 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcat 208  Q
    ||||||||||||||| |||||||||||||   |||||||||||||||||||||||||    
T  20785473 acacatataattacattaaattatgtgatttcctcaaattattagcggtgttggcat 20785529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 212
Target Start/End: Complemental strand, 27101589 - 27101506
Alignment:
Q  128 ggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtca 212  Q
    |||||| |||||||||||||||  |||| ||||||| ||||||||||||||||  | |||||||||||||||||| ||| |||||    
T  27101589 ggacatgtgtcatgtccgacactgacacctataatt-cactaaattatgtgattttttcaaattattagcggtgtcggcgtgtca 27101506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 152 - 211
Target Start/End: Original strand, 24362210 - 24362269
Alignment:
Q  152 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtc 211  Q
    ||||||||||||||||| |||||||||||  |||||||||||||||||||| ||| ||||    
T  24362210 acacatataattacactgaattatgtgattctctcaaattattagcggtgtcggcgtgtc 24362269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 152 - 202
Target Start/End: Complemental strand, 14731763 - 14731713
Alignment:
Q  152 acacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    |||||||||||||||||||||||||||||  ||||||||||||||| ||||    
T  14731763 acacatataattacactaaattatgtgattttctcaaattattagcagtgt 14731713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 196
Target Start/End: Complemental strand, 14134795 - 14134706
Alignment:
Q  107 aattaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattag 196  Q
    |||||||||||| ||||||  |||||  |||| |||  |||||| ||| ||||||||||||| |||||||||||  ||||||||||||||    
T  14134795 aattaggcgtgtcctggtgacggacacgtgtcgtgtttgacaccgacatatataattacactgaattatgtgattttctcaaattattag 14134706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 214
Target Start/End: Original strand, 4786336 - 4786408
Alignment:
Q  142 tccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    ||||||||| ||||||||||||||||| |||||||||||  ||| |||||||||  ||||| ||| |||||||    
T  4786336 tccgacaccgacacatataattacactgaattatgtgattttcttaaattattaatggtgtcggcgtgtcagt 4786408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 216
Target Start/End: Original strand, 31236573 - 31236649
Alignment:
Q  140 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtat 216  Q
    |||||| |||| ||||||||||||||| | |||||||||||  ||||||||||||||| |||| ||| |||| ||||    
T  31236573 tgtccgtcaccgacacatataattacattgaattatgtgattttctcaaattattagcagtgtcggcgtgtccgtat 31236649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 135 - 197
Target Start/End: Complemental strand, 3025619 - 3025557
Alignment:
Q  135 tgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagc 197  Q
    |||| ||||||||||  |||| |||||||||||| |||||||||||  |||||||||||||||    
T  3025619 tgtcgtgtccgacactgacacctataattacactgaattatgtgattttctcaaattattagc 3025557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 214
Target Start/End: Original strand, 15816129 - 15816199
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    ||||||| |||| ||||||||||||||||||||||||  | ||||||||||||  |||| ||| |||||||    
T  15816129 cgacaccgacacttataattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagt 15816199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 108 - 214
Target Start/End: Complemental strand, 31557091 - 31556986
Alignment:
Q  108 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggca 207  Q
    ||||||||||| ||||||| |||||| |||| |||| |||||| | || | |||||||||| |||||||||||  | ||||||||||| | |||| |||     
T  31557091 attaggcgtgtcctggtgtcggacatgtgtcgtgtctgacaccgaaacttgtaattacactgaattatgtgat-ttttcaaattattaactgtgtcggcg 31556993  T
Q  208 tgtcagt 214  Q
    |||||||    
T  31556992 tgtcagt 31556986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 108 - 214
Target Start/End: Original strand, 36450718 - 36450824
Alignment:
Q  108 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggca 207  Q
    ||||||||||| ||||||| |||||   ||| ||||||||||| |||| | |||||||||| |||| ||||||  | ||||||||||||  |||| |||     
T  36450718 attaggcgtgtcctggtgtcggacacgcgtcgtgtccgacacctacacttgtaattacactgaattctgtgattttttcaaattattagttgtgtcggcg 36450817  T
Q  208 tgtcagt 214  Q
    |||||||    
T  36450818 tgtcagt 36450824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 195
Target Start/End: Complemental strand, 11803316 - 11803267
Alignment:
Q  146 acaccaacacatataattacactaaattatgtgatgatctcaaattatta 195  Q
    ||||||||||||||||||||||| |||||||||||  ||| |||||||||    
T  11803316 acaccaacacatataattacactgaattatgtgattttcttaaattatta 11803267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 214
Target Start/End: Original strand, 20679396 - 20679465
Alignment:
Q  145 gacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    |||||| |||| |||||||||||| || ||||||||  |||||||||||||| ||||| | |||||||||    
T  20679396 gacaccgacacttataattacactgaactatgtgattttctcaaattattaggggtgtcgacatgtcagt 20679465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 202
Target Start/End: Complemental strand, 4611583 - 4611535
Alignment:
Q  154 acatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    ||||||||||||||| |||||||| ||  ||||||||||||||||||||    
T  4611583 acatataattacactgaattatgttattttctcaaattattagcggtgt 4611535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 211
Target Start/End: Complemental strand, 5813688 - 5813584
Alignment:
Q  107 aattaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggc 206  Q
    |||||||||||| | ||||| |||||  |||| ||||||||||| |||| | || |||||||||| |||||||   | ||||||||||||| |||| |||    
T  5813688 aattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtatttacactaaaatatgtgactttttcaaattattagctgtgtcggc 5813589  T
Q  207 atgtc 211  Q
     ||||    
T  5813588 gtgtc 5813584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 210
Target Start/End: Complemental strand, 7442902 - 7442838
Alignment:
Q  146 acaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgt 210  Q
    |||||||||| | |||||||||| |||||||| ||  | | ||||||||||||||||||||||||    
T  7442902 acaccaacacttgtaattacactgaattatgtaattttatgaaattattagcggtgttggcatgt 7442838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 211
Target Start/End: Complemental strand, 18407815 - 18407711
Alignment:
Q  107 aattaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggc 206  Q
    |||||||||||| || |||| |||||| |||| |||||| || | |||| | |||||||||| |||||||||||  | |  |||||||||| |||| |||    
T  18407815 aattaggcgtgtcctagtgtcggacatgtgtcgtgtccggcagcgacacttgtaattacactgaattatgtgatttttttgaattattagctgtgtcggc 18407716  T
Q  207 atgtc 211  Q
    |||||    
T  18407715 atgtc 18407711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 180
Target Start/End: Complemental strand, 29447503 - 29447467
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgat 180  Q
    ||||||||||||||||||||||||| |||||||||||    
T  29447503 cgacaccaacacatataattacacttaattatgtgat 29447467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 197
Target Start/End: Complemental strand, 8343037 - 8342978
Alignment:
Q  138 catgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagc 197  Q
    ||||| ||||||| |||| | ||||||||||||||||||||||  | |||||||||||||    
T  8343037 catgtacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagc 8342978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 195
Target Start/End: Original strand, 11927086 - 11927137
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgatgatctcaaattatta 195  Q
    ||||||| ||||||||||||||||| |||||||||||  | |||||||||||    
T  11927086 cgacaccgacacatataattacactgaattatgtgattttatcaaattatta 11927137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 195
Target Start/End: Complemental strand, 20873132 - 20873077
Alignment:
Q  140 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattatta 195  Q
    ||||||||||| |||| | ||||||||||||||||||||||  | |||||||||||    
T  20873132 tgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 20873077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 12606825 - 12606887
Alignment:
Q  140 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    |||| |||||| ||||||||||||||| | |||||| ||||  ||||||||||||||| ||||    
T  12606825 tgtctgacaccgacacatataattacattgaattatatgattttctcaaattattagcagtgt 12606887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 206
Target Start/End: Complemental strand, 34222998 - 34222944
Alignment:
Q  152 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggc 206  Q
    ||||||||||||||||| |||||||||||  | | |||||||||||| |||||||    
T  34222998 acacatataattacacttaattatgtgattttattaaattattagcgatgttggc 34222944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 36934729 - 36934671
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    |||| |||||||||||||||||| | |||||||||||  | || |||||||||||||||    
T  36934729 cgacgccaacacatataattacaatgaattatgtgattttttcgaattattagcggtgt 36934671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 194
Target Start/End: Complemental strand, 40332286 - 40332200
Alignment:
Q  108 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattatt 194  Q
    |||||||| || | ||||| |||||  |||| ||||| ||||| |||| | |||||||||| |||||||||||  ||||||||||||    
T  40332286 attaggcgcgtcccggtgtgggacacgtgtcgtgtcccacaccgacacttgtaattacactgaattatgtgattttctcaaattatt 40332200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 214
Target Start/End: Original strand, 926785 - 926858
Alignment:
Q  141 gtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    |||||||||| |||| |||||||||||| ||  ||| |||  ||||||||||||||  |||||||| |||||||    
T  926785 gtccgacaccgacacttataattacactgaacaatgagattttctcaaattattaggagtgttggcgtgtcagt 926858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 177
Target Start/End: Complemental strand, 11833925 - 11833888
Alignment:
Q  140 tgtccgacaccaacacatataattacactaaattatgt 177  Q
    ||||||||||||||||||||||||||||| ||| ||||    
T  11833925 tgtccgacaccaacacatataattacactgaatcatgt 11833888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 214
Target Start/End: Complemental strand, 22596056 - 22595983
Alignment:
Q  141 gtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    ||||||||||||||| | |||||||||| |||||||| ||  | | ||||||||||| |||| ||| |||||||    
T  22596056 gtccgacaccaacacttgtaattacactgaattatgttatttttttaaattattagctgtgtcggcgtgtcagt 22595983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 30077385 - 30077454
Alignment:
Q  142 tccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtc 211  Q
    ||||||||  |||| | |||||||||| |||||||||||| | ||||||||||||| | |||||| ||||    
T  30077385 tccgacacggacacttgtaattacactgaattatgtgatgttttcaaattattagctgcgttggcgtgtc 30077454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 196
Target Start/End: Original strand, 2572056 - 2572108
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattag 196  Q
    ||||||| |||| | ||||||||||||||||||||||  | ||||||||||||    
T  2572056 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattag 2572108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 196
Target Start/End: Complemental strand, 4948715 - 4948659
Alignment:
Q  140 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattag 196  Q
    ||||||||||| |||| | |||||||||| |||||||||||  | ||||||||||||    
T  4948715 tgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 4948659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 202
Target Start/End: Complemental strand, 7658520 - 7658464
Alignment:
Q  146 acaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    ||||| ||| ||||||||||||| |||||||| ||  |||||||||||||| |||||    
T  7658520 acaccgacaaatataattacactgaattatgtaattttctcaaattattagtggtgt 7658464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 180
Target Start/End: Complemental strand, 8847315 - 8847279
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgat 180  Q
    ||||||| ||||||||||||||||| |||||||||||    
T  8847315 cgacaccgacacatataattacactgaattatgtgat 8847279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 202
Target Start/End: Original strand, 12570736 - 12570792
Alignment:
Q  146 acaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    ||||||||| ||||||||||||| ||||||| | |  ||| ||||||||||||||||    
T  12570736 acaccaacatatataattacacttaattatgcgtttttcttaaattattagcggtgt 12570792  T

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Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 216
Target Start/End: Complemental strand, 24447076 - 24447016
Alignment:
Q  156 atataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtat 216  Q
    |||||||||| ||||||||||||||  ||||||||||| | || | ||||| |||||||||    
T  24447076 atataattaccctaaattatgtgattttctcaaattatcaacgttattggcgtgtcagtat 24447016  T

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Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 25172698 - 25172770
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtat 216  Q
    ||||||| ||||||||||||||| |||| ||||| ||  | ||||||||||||| ||||  |||| |||||||    
T  25172698 cgacaccgacacatataattacattaaaatatgtaattttatcaaattattagcagtgtcagcatatcagtat 25172770  T

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Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 180
Target Start/End: Original strand, 26902175 - 26902211
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgat 180  Q
    ||||||| ||||||||||||||||| |||||||||||    
T  26902175 cgacaccgacacatataattacactgaattatgtgat 26902211  T

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Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 216
Target Start/End: Complemental strand, 27213598 - 27213534
Alignment:
Q  152 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtat 216  Q
    ||||||||||||||| | |||||||||||  ||| ||||||||||| |||| ||| |||| ||||    
T  27213598 acacatataattacagtgaattatgtgattttctgaaattattagcagtgtcggcgtgtctgtat 27213534  T

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Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 214
Target Start/End: Original strand, 31109512 - 31109588
Alignment:
Q  138 catgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    ||||||||||||  ||||||||| ||| ||| |||| | ||||  ||||||||||||| |||||| ||| |||||||    
T  31109512 catgtccgacactgacacatatagttagactgaattgtttgattttctcaaattattaacggtgtcggcgtgtcagt 31109588  T

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Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 214
Target Start/End: Original strand, 37283824 - 37283880
Alignment:
Q  158 ataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    ||||||||||| |||||||||||  ||||| |||||||||||||   ||||||||||    
T  37283824 ataattacactgaattatgtgattttctcagattattagcggtgcccgcatgtcagt 37283880  T

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Target: scaffold0697 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 114 - 211
Target Start/End: Complemental strand, 1733 - 1636
Alignment:
Q  114 cgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtc 211  Q
    ||||| || |||| |||||| |||| ||||||||||| |||| |||||||| || ||||||| ||||  ||||||||||||| |||||| ||| ||||    
T  1733 cgtgtcctagtgtcggacatgtgtcgtgtccgacaccgacacttataattataccaaattatatgattttctcaaattattaacggtgtcggcgtgtc 1636  T

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Target: scaffold0050 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 195
Target Start/End: Complemental strand, 70373 - 70286
Alignment:
Q  108 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattatta 195  Q
    ||||||| ||| ||||||| |||||  |||| ||||||||||| |||| |||||||||||| |||||||| ||  | |||||||||||    
T  70373 attaggcatgtcctggtgtcggacacgtgtcgtgtccgacaccgacacttataattacactgaattatgttattttttcaaattatta 70286  T

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Target: scaffold0036 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 211
Target Start/End: Original strand, 9747 - 9814
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtc 211  Q
    ||||||| ||||||||||||||||| ||||| |||||  |||||||||||||| || || ||||||||    
T  9747 cgacaccgacacatataattacactgaattaagtgattttctcaaattattagtggcgtcggcatgtc 9814  T

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Target: scaffold0123 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 152 - 202
Target Start/End: Original strand, 44533 - 44583
Alignment:
Q  152 acacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    ||||||||||||||||| |||||||||||  ||||||||| ||||||||||    
T  44533 acacatataattacactgaattatgtgattttctcaaatttttagcggtgt 44583  T

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Target: scaffold0053 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 108 - 214
Target Start/End: Complemental strand, 8893 - 8787
Alignment:
Q  108 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggca 207  Q
    |||||||||||   ||||| |||||  |||| ||||||||||| |||| | |||||||||||||| || ||||  | ||||||||||||| |||| |||     
T  8893 attaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaataatatgattttttcaaattattagctgtgtcggcg 8794  T
Q  208 tgtcagt 214  Q
    |||||||    
T  8793 tgtcagt 8787  T

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Target: scaffold0022 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 108 - 214
Target Start/End: Complemental strand, 90938 - 90832
Alignment:
Q  108 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggca 207  Q
    |||||||||||| |||||| |||||  |||  |||| |||| | ||| ||||||||||||| |||||| ||||  |||||||||||||  ||||||||      
T  90938 attaggcgtgttttggtgtcggacacgtgttgtgtctgacatcgacatatataattacactgaattatatgattttctcaaattattaatggtgttggtg 90839  T
Q  208 tgtcagt 214  Q
    |||||||    
T  90838 tgtcagt 90832  T

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Target: scaffold0022; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 211
Target Start/End: Complemental strand, 99952 - 99885
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtc 211  Q
    ||||||||||||||||||||||| | |||||||| ||  ||| ||||||||| |||||| | ||||||    
T  99952 cgacaccaacacatataattacattgaattatgttattttctaaaattattatcggtgtcgacatgtc 99885  T

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Target: scaffold0020 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 135312 - 135370
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 202  Q
    ||||||| ||||||||||||||||  |||||||||||  ||||||||||||||| ||||    
T  135312 cgacaccgacacatataattacacagaattatgtgattttctcaaattattagcagtgt 135370  T

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Target: scaffold0008 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 152 - 214
Target Start/End: Original strand, 263380 - 263442
Alignment:
Q  152 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    |||| |||||||||||| ||||||||| |  ||||||||||||||| |||||| |||||||||    
T  263380 acacttataattacactgaattatgtggttttctcaaattattagcagtgttgacatgtcagt 263442  T

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Target: scaffold0236 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 195
Target Start/End: Original strand, 25768 - 25819
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgatgatctcaaattatta 195  Q
    ||||||| |||| ||||||||||||||||||||||||  |||| ||||||||    
T  25768 cgacaccgacacttataattacactaaattatgtgattttctctaattatta 25819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 214
Target Start/End: Complemental strand, 92851 - 92796
Alignment:
Q  159 taattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    |||||||||| |||||||| ||  |||||||||||||||||||| ||| |||||||    
T  92851 taattacactgaattatgtaattttctcaaattattagcggtgtcggcgtgtcagt 92796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 213
Target Start/End: Complemental strand, 53236 - 53170
Alignment:
Q  147 caccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcag 213  Q
    |||| |||| |||||||||||| |||||||||||  |||||||||||| ||||| | ||| ||||||    
T  53236 caccgacacttataattacactgaattatgtgattttctcaaattattggcggtatcggcgtgtcag 53170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 214
Target Start/End: Complemental strand, 241653 - 241583
Alignment:
Q  144 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    ||||||| ||||  |||||||||||||||||||||||  |  |||||||||||| |||| ||| |||||||    
T  241653 cgacaccgacactcataattacactaaattatgtgatttttccaaattattagctgtgtcggcgtgtcagt 241583  T

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Target: scaffold0103 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 214
Target Start/End: Complemental strand, 51864 - 51800
Alignment:
Q  150 caacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 214  Q
    |||||| | |||||||||| |||||||||||  | ||||||||||||| |||| ||| |||||||    
T  51864 caacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagt 51800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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