View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17422_low_42 (Length: 206)
Name: NF17422_low_42
Description: NF17422
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17422_low_42 |
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Alignment Details
Target: chr5 (Bit Score: 176; Significance: 5e-95; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 176; E-Value: 5e-95
Query Start/End: Original strand, 13 - 192
Target Start/End: Original strand, 43365261 - 43365440
Alignment:
| Q |
13 |
aacctgtgtaatgcaattaaatgttattcaatcatatggcatcaacacaacaataactagcatgttggacacctaacttacaatgttggaaccacaaatt |
112 |
Q |
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| T |
43365261 |
aacctgtgtaatgcaattaaatgttattcaatcatatggcatcaacacaacaataactagcatgttggacacctaacttacaatgttggaaccacaaatt |
43365360 |
T |
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| Q |
113 |
ttattaataaaattgaggcacacaattttgatgaaagcttccaattagggacctttaatgaaacacttacacgtttcttg |
192 |
Q |
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| T |
43365361 |
ttattaataaaattgaggcacacaattttgatgaaagcttccaattagggacctttaattaaacacttacacgtttcttg |
43365440 |
T |
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