View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17425_low_7 (Length: 247)

Name: NF17425_low_7
Description: NF17425
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17425_low_7
NF17425_low_7
[»] chr5 (29 HSPs)
chr5 (92-234)||(39740362-39740519)
chr5 (1-70)||(10069969-10070038)
chr5 (1-70)||(13661808-13661877)
chr5 (1-70)||(35132522-35132591)
chr5 (1-70)||(35504357-35504426)
chr5 (1-70)||(10054469-10054538)
chr5 (1-70)||(11958084-11958153)
chr5 (1-70)||(34650950-34651018)
chr5 (1-67)||(19647775-19647841)
chr5 (1-70)||(8787339-8787408)
chr5 (1-70)||(9721724-9721793)
chr5 (5-70)||(13470151-13470216)
chr5 (1-67)||(11846075-11846141)
chr5 (1-70)||(4837258-4837326)
chr5 (1-70)||(6283562-6283631)
chr5 (1-70)||(12506296-12506365)
chr5 (1-70)||(21547511-21547579)
chr5 (1-70)||(31909632-31909700)
chr5 (1-70)||(39069381-39069449)
chr5 (3-37)||(40057340-40057374)
chr5 (17-70)||(21944994-21945047)
chr5 (1-69)||(2619674-2619742)
chr5 (2-38)||(19436954-19436990)
chr5 (1-37)||(40564521-40564557)
chr5 (1-42)||(6284823-6284864)
chr5 (1-69)||(20175228-20175296)
chr5 (33-65)||(30889435-30889467)
chr5 (10-42)||(39067062-39067094)
chr5 (11-70)||(40608662-40608722)
[»] chr3 (38 HSPs)
chr3 (1-70)||(272220-272289)
chr3 (1-70)||(39074419-39074488)
chr3 (1-70)||(46352634-46352703)
chr3 (1-70)||(49893331-49893400)
chr3 (1-70)||(52520681-52520750)
chr3 (1-70)||(4168183-4168252)
chr3 (1-70)||(48725271-48725340)
chr3 (1-70)||(53489941-53490012)
chr3 (1-70)||(13159897-13159966)
chr3 (1-70)||(18014672-18014741)
chr3 (1-70)||(20923992-20924061)
chr3 (1-70)||(41304005-41304074)
chr3 (1-70)||(43786871-43786940)
chr3 (1-70)||(858589-858658)
chr3 (1-70)||(40362697-40362766)
chr3 (1-70)||(52246582-52246651)
chr3 (1-70)||(52718168-52718236)
chr3 (1-51)||(41554057-41554107)
chr3 (1-70)||(2119431-2119500)
chr3 (1-70)||(23925280-23925349)
chr3 (10-70)||(2362801-2362861)
chr3 (1-53)||(7468428-7468480)
chr3 (1-64)||(50395679-50395742)
chr3 (1-47)||(2391630-2391676)
chr3 (1-47)||(2393391-2393437)
chr3 (1-70)||(10617401-10617469)
chr3 (1-70)||(28139309-28139378)
chr3 (1-49)||(42964366-42964414)
chr3 (3-38)||(22248918-22248953)
chr3 (1-68)||(43269856-43269923)
chr3 (1-51)||(2938157-2938207)
chr3 (5-67)||(49529390-49529451)
chr3 (3-40)||(2505379-2505416)
chr3 (1-70)||(11308327-11308396)
chr3 (1-70)||(27994417-27994486)
chr3 (1-38)||(29241669-29241706)
chr3 (1-42)||(42548123-42548164)
chr3 (1-53)||(24488383-24488435)
[»] chr2 (39 HSPs)
chr2 (1-70)||(561635-561704)
chr2 (1-70)||(30486210-30486279)
chr2 (1-70)||(20552931-20553000)
chr2 (1-70)||(31438646-31438715)
chr2 (1-70)||(44587902-44587971)
chr2 (1-67)||(4381798-4381864)
chr2 (1-70)||(31390012-31390081)
chr2 (1-70)||(32360986-32361055)
chr2 (3-70)||(22068438-22068505)
chr2 (1-70)||(1859162-1859231)
chr2 (1-70)||(6580189-6580258)
chr2 (1-70)||(22887750-22887819)
chr2 (1-70)||(26387181-26387250)
chr2 (1-70)||(26891780-26891849)
chr2 (1-70)||(27856513-27856582)
chr2 (1-70)||(38590991-38591060)
chr2 (1-70)||(32860102-32860171)
chr2 (1-70)||(43637165-43637233)
chr2 (1-67)||(3668230-3668295)
chr2 (1-39)||(5881248-5881286)
chr2 (1-70)||(8969524-8969591)
chr2 (1-42)||(2898099-2898140)
chr2 (1-42)||(22567630-22567671)
chr2 (1-70)||(34123141-34123210)
chr2 (1-70)||(34442649-34442717)
chr2 (10-70)||(44854310-44854369)
chr2 (11-69)||(29771417-29771476)
chr2 (11-70)||(44854467-44854526)
chr2 (1-70)||(4022596-4022664)
chr2 (1-38)||(5093656-5093693)
chr2 (2-39)||(27584769-27584806)
chr2 (10-46)||(13574155-13574191)
chr2 (7-70)||(28012077-28012140)
chr2 (3-47)||(28600990-28601034)
chr2 (1-39)||(35851868-35851906)
chr2 (32-70)||(35851917-35851955)
chr2 (1-47)||(38296200-38296246)
chr2 (1-70)||(39531824-39531893)
chr2 (10-39)||(43993185-43993214)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-70)||(53802-53871)
[»] chr8 (43 HSPs)
chr8 (1-70)||(30675689-30675758)
chr8 (1-68)||(20831670-20831737)
chr8 (1-67)||(13643015-13643081)
chr8 (1-67)||(13743440-13743506)
chr8 (1-70)||(168466-168535)
chr8 (1-70)||(12652630-12652699)
chr8 (1-70)||(27988616-27988685)
chr8 (1-70)||(28045918-28045987)
chr8 (1-70)||(33357246-33357315)
chr8 (1-70)||(34228682-34228751)
chr8 (1-70)||(4537861-4537930)
chr8 (1-70)||(16394178-16394247)
chr8 (1-69)||(16888661-16888728)
chr8 (1-57)||(42035098-42035154)
chr8 (1-67)||(9537941-9538007)
chr8 (1-70)||(2805377-2805446)
chr8 (1-70)||(4648195-4648263)
chr8 (1-70)||(9063169-9063237)
chr8 (1-70)||(11112639-11112708)
chr8 (1-70)||(12203855-12203923)
chr8 (1-70)||(12448283-12448351)
chr8 (2-67)||(29444258-29444323)
chr8 (1-70)||(32113908-32113977)
chr8 (1-70)||(37373206-37373274)
chr8 (1-70)||(43119217-43119286)
chr8 (1-69)||(21595848-21595915)
chr8 (1-70)||(3930350-3930418)
chr8 (1-51)||(9254018-9254068)
chr8 (1-67)||(10618021-10618087)
chr8 (1-70)||(16785087-16785155)
chr8 (1-38)||(16890597-16890634)
chr8 (1-38)||(36730476-36730513)
chr8 (17-70)||(39751605-39751658)
chr8 (3-70)||(36923782-36923849)
chr8 (1-39)||(28626799-28626837)
chr8 (3-69)||(30933451-30933517)
chr8 (1-70)||(9278212-9278281)
chr8 (1-70)||(29235235-29235304)
chr8 (1-42)||(40831305-40831346)
chr8 (1-37)||(7304635-7304671)
chr8 (11-70)||(29566700-29566760)
chr8 (10-70)||(2490315-2490375)
chr8 (14-70)||(5725590-5725646)
[»] chr6 (36 HSPs)
chr6 (1-70)||(392096-392165)
chr6 (1-70)||(12525719-12525788)
chr6 (1-70)||(20897948-20898017)
chr6 (1-70)||(27433492-27433561)
chr6 (1-68)||(2350654-2350721)
chr6 (1-70)||(3515766-3515835)
chr6 (1-70)||(1391295-1391363)
chr6 (1-70)||(7851276-7851345)
chr6 (1-70)||(12145234-12145303)
chr6 (1-70)||(21878464-21878533)
chr6 (1-70)||(23402138-23402207)
chr6 (1-70)||(34396644-34396713)
chr6 (1-70)||(2580952-2581021)
chr6 (1-70)||(4215695-4215764)
chr6 (1-70)||(32929625-32929694)
chr6 (1-51)||(18276732-18276782)
chr6 (1-67)||(32985310-32985376)
chr6 (1-51)||(34477667-34477717)
chr6 (1-70)||(13529455-13529524)
chr6 (1-70)||(29451232-29451300)
chr6 (1-70)||(35043890-35043959)
chr6 (1-48)||(26467241-26467288)
chr6 (1-51)||(23629693-23629743)
chr6 (1-70)||(29978233-29978301)
chr6 (1-70)||(31280321-31280390)
chr6 (1-56)||(11115212-11115267)
chr6 (1-40)||(25165530-25165569)
chr6 (1-70)||(3026126-3026193)
chr6 (1-38)||(13417079-13417116)
chr6 (1-70)||(14559922-14559991)
chr6 (1-70)||(28225221-28225289)
chr6 (1-38)||(34851966-34852003)
chr6 (11-70)||(34712252-34712312)
chr6 (1-68)||(9660988-9661055)
chr6 (2-70)||(5323400-5323468)
chr6 (11-70)||(34706720-34706780)
[»] chr4 (42 HSPs)
chr4 (1-70)||(7768938-7769007)
chr4 (1-70)||(15186243-15186312)
chr4 (1-70)||(18067996-18068065)
chr4 (1-70)||(54897308-54897377)
chr4 (1-70)||(789647-789716)
chr4 (1-70)||(4268939-4269008)
chr4 (1-70)||(12356244-12356313)
chr4 (1-70)||(32217045-32217114)
chr4 (1-70)||(43944507-43944576)
chr4 (1-70)||(16536048-16536117)
chr4 (1-70)||(29591189-29591258)
chr4 (1-70)||(43202500-43202569)
chr4 (1-70)||(47231989-47232058)
chr4 (1-69)||(19503222-19503289)
chr4 (1-70)||(4089142-4089211)
chr4 (1-70)||(4220195-4220264)
chr4 (1-70)||(28755621-28755689)
chr4 (1-70)||(32202597-32202666)
chr4 (1-70)||(42898863-42898932)
chr4 (1-70)||(54054548-54054617)
chr4 (1-70)||(3783618-3783687)
chr4 (1-70)||(24679759-24679827)
chr4 (1-70)||(33108790-33108858)
chr4 (1-70)||(52533902-52533971)
chr4 (1-67)||(50619089-50619155)
chr4 (1-47)||(54655993-54656039)
chr4 (1-47)||(54945895-54945941)
chr4 (1-42)||(1432659-1432700)
chr4 (1-46)||(37987959-37988004)
chr4 (1-65)||(39843912-39843976)
chr4 (1-44)||(42815135-42815178)
chr4 (1-50)||(30154280-30154328)
chr4 (1-70)||(55882684-55882752)
chr4 (22-70)||(46688348-46688396)
chr4 (1-40)||(36395129-36395168)
chr4 (12-70)||(50167591-50167649)
chr4 (1-39)||(52697083-52697121)
chr4 (1-70)||(6164094-6164162)
chr4 (1-70)||(41265459-41265528)
chr4 (1-70)||(49915159-49915228)
chr4 (1-38)||(53655995-53656032)
chr4 (20-68)||(22225882-22225930)
[»] chr1 (51 HSPs)
chr1 (1-70)||(3097659-3097728)
chr1 (1-70)||(29657771-29657840)
chr1 (1-70)||(3784830-3784899)
chr1 (1-70)||(17333399-17333467)
chr1 (1-70)||(24178580-24178649)
chr1 (1-70)||(29210413-29210482)
chr1 (1-70)||(30294498-30294567)
chr1 (1-70)||(42770107-42770176)
chr1 (1-70)||(47009993-47010062)
chr1 (1-67)||(12072179-12072245)
chr1 (1-70)||(5694321-5694390)
chr1 (1-70)||(15227739-15227808)
chr1 (1-70)||(18043162-18043231)
chr1 (1-70)||(51065865-51065934)
chr1 (1-70)||(51368902-51368971)
chr1 (1-68)||(38702050-38702117)
chr1 (1-70)||(29683195-29683265)
chr1 (1-70)||(9266845-9266914)
chr1 (1-70)||(14350394-14350463)
chr1 (1-70)||(30657608-30657677)
chr1 (1-70)||(38162850-38162919)
chr1 (1-70)||(45431279-45431347)
chr1 (1-69)||(19011113-19011180)
chr1 (2-70)||(19031933-19032001)
chr1 (1-63)||(6770344-6770406)
chr1 (1-70)||(13961212-13961280)
chr1 (1-70)||(47532787-47532855)
chr1 (1-70)||(48071483-48071551)
chr1 (4-56)||(14881086-14881138)
chr1 (1-45)||(15282631-15282675)
chr1 (11-70)||(28726032-28726092)
chr1 (1-67)||(43286725-43286791)
chr1 (11-70)||(38595879-38595939)
chr1 (11-67)||(48383238-48383294)
chr1 (1-68)||(23473581-23473648)
chr1 (7-70)||(28481844-28481907)
chr1 (1-56)||(36446442-36446496)
chr1 (1-51)||(45449361-45449411)
chr1 (1-38)||(10976019-10976056)
chr1 (1-42)||(35985738-35985779)
chr1 (1-42)||(38335197-38335238)
chr1 (5-70)||(41730305-41730370)
chr1 (1-70)||(52749602-52749671)
chr1 (1-37)||(39497340-39497376)
chr1 (11-70)||(52702272-52702332)
chr1 (1-40)||(8473031-8473070)
chr1 (1-43)||(35700767-35700809)
chr1 (1-42)||(26228221-26228262)
chr1 (1-70)||(39912396-39912465)
chr1 (11-70)||(27457077-27457137)
chr1 (1-37)||(50128289-50128325)
[»] scaffold0264 (1 HSPs)
scaffold0264 (1-70)||(22961-23030)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-70)||(68407-68476)
[»] chr7 (39 HSPs)
chr7 (1-70)||(12218553-12218622)
chr7 (1-70)||(29993604-29993673)
chr7 (1-70)||(34333284-34333353)
chr7 (1-70)||(34546431-34546500)
chr7 (1-70)||(4628566-4628635)
chr7 (1-70)||(18485961-18486030)
chr7 (1-70)||(24438477-24438546)
chr7 (1-70)||(34606261-34606330)
chr7 (1-70)||(5239285-5239354)
chr7 (1-70)||(8754702-8754771)
chr7 (1-70)||(24798520-24798588)
chr7 (1-50)||(30810675-30810724)
chr7 (1-70)||(47839493-47839561)
chr7 (3-67)||(28262034-28262098)
chr7 (5-69)||(28587911-28587974)
chr7 (1-67)||(11686441-11686507)
chr7 (1-70)||(1736980-1737049)
chr7 (1-70)||(5729346-5729415)
chr7 (1-70)||(27456230-27456298)
chr7 (1-70)||(43594153-43594222)
chr7 (1-69)||(47656981-47657049)
chr7 (1-70)||(13064994-13065061)
chr7 (1-68)||(22973600-22973667)
chr7 (15-70)||(47118095-47118150)
chr7 (1-39)||(4100641-4100679)
chr7 (1-70)||(18470056-18470126)
chr7 (1-39)||(47083086-47083124)
chr7 (1-70)||(23357824-23357893)
chr7 (1-70)||(37631659-37631728)
chr7 (11-70)||(6097336-6097396)
chr7 (1-46)||(3021915-3021960)
chr7 (1-42)||(4087651-4087692)
chr7 (1-38)||(18117175-18117212)
chr7 (1-38)||(23363284-23363321)
chr7 (11-67)||(30924117-30924174)
chr7 (1-46)||(36437401-36437446)
chr7 (11-70)||(32805538-32805598)
chr7 (14-70)||(37674243-37674299)
chr7 (1-41)||(45045799-45045839)
[»] scaffold0188 (1 HSPs)
scaffold0188 (1-69)||(6227-6295)
[»] scaffold0021 (1 HSPs)
scaffold0021 (1-67)||(116207-116273)
[»] scaffold1152 (1 HSPs)
scaffold1152 (1-70)||(678-747)
[»] scaffold0045 (2 HSPs)
scaffold0045 (1-70)||(50548-50617)
scaffold0045 (1-42)||(53463-53504)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-70)||(147022-147091)
[»] scaffold0034 (1 HSPs)
scaffold0034 (1-67)||(95701-95767)
[»] scaffold0190 (1 HSPs)
scaffold0190 (1-70)||(14896-14965)
[»] scaffold0674 (1 HSPs)
scaffold0674 (1-51)||(8014-8064)
[»] scaffold0549 (1 HSPs)
scaffold0549 (1-51)||(7307-7357)
[»] scaffold0206 (1 HSPs)
scaffold0206 (1-70)||(11087-11154)
[»] scaffold0524 (1 HSPs)
scaffold0524 (1-70)||(825-894)
[»] scaffold1266 (1 HSPs)
scaffold1266 (1-70)||(293-361)
[»] scaffold0050 (1 HSPs)
scaffold0050 (1-38)||(69258-69295)
[»] scaffold0038 (1 HSPs)
scaffold0038 (1-70)||(25719-25787)
[»] scaffold0007 (1 HSPs)
scaffold0007 (14-70)||(233864-233920)


Alignment Details
Target: chr5 (Bit Score: 90; Significance: 1e-43; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 92 - 234
Target Start/End: Original strand, 39740362 - 39740519
Alignment:
Q  92 caatttatctttcaatatgagacacatgattctttttctcctccttgtggctggaaatgagtcaggtgtatata----------------aaaatacata 175  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||                ||||||||||    
T  39740362 caatttatctttcaatatgagacatg-gattctttttctcctccttgtggctggaaatgagtcaggtgtatataaaaataaaatattataaaaatacata 39740460  T
Q  176 caactgacacaatctgagaaagaacaaacatttaatatggaatatatacatacatacat 234  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39740461 caactgacacaatctgagaaagaacaaacatttaatatggaatatatacatacatacat 39740519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 10070038 - 10069969
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  10070038 attaactactatataatttcctttttcatatccttaaccagtgccccgggggcaccggttagcatttccc 10069969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 13661877 - 13661808
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||    
T  13661877 attaactactatataatttcctttttcatatccttaaccagtgctccgggggcaccggttagcatttccc 13661808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 35132591 - 35132522
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||||    
T  35132591 attaactactatataatttcctttttcatatccttaaccagtgtcccgggggcaccggttagcatttccc 35132522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 35504357 - 35504426
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||||||||||||| |||||||||||  ||||||||||||| ||||||||||||    
T  35504357 attaactactatataatttcctttttcatacccttaaccagtgtcccgggggcaccggttagcatttccc 35504426  T

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Target: chr5; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 10054469 - 10054538
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||| || ||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||    
T  10054469 attaattattatataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccc 10054538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 11958084 - 11958153
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||||||||| ||||| |||||| || |||||||||||||| ||||||||||||    
T  11958084 attaactactatataatttccttttttatatctttaacctgtgccccgggggcaccggttagcatttccc 11958153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 34650950 - 34651018
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||||||||||||| |||||||||||  ||||||||||||| ||||||||||||    
T  34650950 attaactactatataatttcctttttcatacccttaaccagt-gcccgggggcaccggttagcatttccc 34651018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 19647775 - 19647841
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcattt 67  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| |  |||| |||||||||    
T  19647775 attaactactatataatttcctttttcatatccttaaccagtgccccggagataccggttagcattt 19647841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 8787408 - 8787339
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||| ||||||||| ||||||||| | |||||||| ||||| ||||||||||||    
T  8787408 attaactactatataatttcatttttcatacccttaaccaatgccccggggacaccggttagcatttccc 8787339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 9721724 - 9721793
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||| ||||||||||||||||||||||||| ||||||||||| |||| || ||||| ||| ||||||||    
T  9721724 attaattactatataatttcctttttcatattcttaaccagtagcccgaggacaccggttaacatttccc 9721793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 13470216 - 13470151
Alignment:
Q  5 actactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||| ||||||||||||||||||||||||||| ||||   ||||||| ||||||||||||    
T  13470216 actactatattatttcctttttcatatccttaaccagtgccccataggcaccggttagcatttccc 13470151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 11846141 - 11846075
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcattt 67  Q
    |||||||||||||||||||||||||| ||||||||| | |||  ||||||| ||||| |||||||||    
T  11846141 attaactactatataatttccttttttatatccttagctagtgtcccggggacaccgcttagcattt 11846075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 4837326 - 4837258
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||| ||||||||||||||||||||||||| ||||||| || |||| ||||||||| ||| ||||||||    
T  4837326 attaattactatataatttcctttttcatattcttaaccggtgcccc-ggggcaccggttaacatttccc 4837258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 6283631 - 6283562
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||| || |||||||||| |||||||||||| ||||| ||| |||||| ||||||| ||||||||||||    
T  6283631 attaattattatataattttctttttcatatctttaactagtgccccggaggcaccggttagcatttccc 6283562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 12506365 - 12506296
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||||||||||||||||||||||||||||  |||||| ||| | || | ||||||| ||||||||||||    
T  12506365 attaactactatataatttcctttttcatactcttaacgagtgctccagaggcaccggttagcatttccc 12506296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 21547511 - 21547579
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||||||||| |||||||||||| |   ||||||| ||||| ||||||||||||    
T  21547511 attaactactatataatttccttttttatatccttaacc-gatgcccggggacaccggttagcatttccc 21547579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 31909700 - 31909632
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||||||||||||||||||| |||| ||||||||||||||||  |||| ||||||| ||| ||||||||    
T  31909700 attaactactatataatttcccttttaatatccttaaccagta-tccggaggcaccggttaacatttccc 31909632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 39069449 - 39069381
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||||||||||||||||||| |||||||| ||||||||||| ||| ||  |||||| ||||||||||||    
T  39069449 attaactactatataatttcc-ttttcatacccttaaccagtgccctggaagcaccggttagcatttccc 39069381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 37
Target Start/End: Complemental strand, 40057374 - 40057340
Alignment:
Q  3 taactactatataatttcctttttcatatccttaa 37  Q
    |||||||||||||||||||||||||||||||||||    
T  40057374 taactactatataatttcctttttcatatccttaa 40057340  T

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Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 21944994 - 21945047
Alignment:
Q  17 tttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||||||||  |||||||||||||| |||||| ||||||| ||||||||||||    
T  21944994 tttcctttttattatccttaaccagtgccccggaggcaccggttagcatttccc 21945047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 2619674 - 2619742
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttcc 69  Q
    ||||||||||| ||||||| |||||||||||||||||| |||  ||||| | ||||  |||||||||||    
T  2619674 attaactactaaataattttctttttcatatccttaacaagtgtcccggagacaccagttagcatttcc 2619742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 19436954 - 19436990
Alignment:
Q  2 ttaactactatataatttcctttttcatatccttaac 38  Q
    ||||| |||||||||||||||||||||||||||||||    
T  19436954 ttaaccactatataatttcctttttcatatccttaac 19436990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 40564521 - 40564557
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaa 37  Q
    |||||||||||||||||||||||||||| ||||||||    
T  40564521 attaactactatataatttcctttttcaaatccttaa 40564557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 6284864 - 6284823
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagt 42  Q
    ||||| ||||||||||||||||||||  ||||||||||||||    
T  6284864 attaattactatataatttcctttttagtatccttaaccagt 6284823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 20175296 - 20175228
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttcc 69  Q
    |||||||||||||||||||| ||||| ||||  |||||||||  | ||| | ||||| |||||||||||    
T  20175296 attaactactatataatttctttttttatatttttaaccagtgtctcggagacaccggttagcatttcc 20175228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 65
Target Start/End: Complemental strand, 30889467 - 30889435
Alignment:
Q  33 cttaaccagtaccccgggggcaccgattagcat 65  Q
    ||||||||||||||||| |||||||||||||||    
T  30889467 cttaaccagtaccccggaggcaccgattagcat 30889435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 42
Target Start/End: Original strand, 39067062 - 39067094
Alignment:
Q  10 tatataatttcctttttcatatccttaaccagt 42  Q
    ||||||||||| |||||||||||||||||||||    
T  39067062 tatataatttcttttttcatatccttaaccagt 39067094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 70
Target Start/End: Original strand, 40608662 - 40608722
Alignment:
Q  11 atataatttcctttttcat-atccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||||||||| |||| || |||||||||||||  |||||| |||||| ||||||||||||    
T  40608662 atataatttccctttttattatccttaaccagtgtcccgggagcaccggttagcatttccc 40608722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 7e-27; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 272289 - 272220
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  272289 attaactactatataatttcctttttcatatccttaaccagtgccccgggggcaccggttagcatttccc 272220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 39074488 - 39074419
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||    
T  39074488 attaactactatataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccc 39074419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 46352703 - 46352634
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  46352703 attaactactgtataatttcctttttcatatccttaaccagtgccccgggggcaccggttagcatttccc 46352634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 49893400 - 49893331
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  49893400 attaactattatataatttcctttttcatatccttaaccagtgccccgggggcaccggttagcatttccc 49893331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 52520750 - 52520681
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||    
T  52520750 attaactactatataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccc 52520681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 4168252 - 4168183
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||| ||||||||||||    
T  4168252 attaactactatataatttccttttttatatccttaaccagttccccggaggcaccggttagcatttccc 4168183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 48725340 - 48725271
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||    
T  48725340 attaattactatataatttcctttttcatatccttaaccagtgcccccggggcaccggttagcatttccc 48725271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 53489941 - 53490012
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtacccc--gggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||  |||||||||||||||||||||||    
T  53489941 attaactactatataatttcctttttcatacccttaaccagtgccccgggggggcaccgattagcatttccc 53490012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 13159966 - 13159897
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||||||||||||||||||||| || ||||| || |||||| ||||||||||||    
T  13159966 attaactactatataatttcctttttcatatccttaactagaaccccaggagcaccggttagcatttccc 13159897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 18014741 - 18014672
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||||||||||||||||| ||||||||||||||||| |||| |||||||||||||  ||||||||||||    
T  18014741 attaactactatataatttactttttcatatccttaatcagtgccccgggggcaccagttagcatttccc 18014672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 20924061 - 20923992
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||||  |||||| ||||||||||||    
T  20924061 attaactactatataatttcctttttcatacccttaaccagtgccccggaagcaccggttagcatttccc 20923992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 41304074 - 41304005
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||| |||||||||||||||||||||||||||||||||| | |||||| ||||||| ||||||||||||    
T  41304074 attaattactatataatttcctttttcatatccttaaccactgccccggaggcaccggttagcatttccc 41304005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 43786940 - 43786871
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||||||||||||| | ||||||||| |||||| ||||||| ||||||||||||    
T  43786940 attaactactatataatttcctttttcataccattaaccagtgccccggaggcaccggttagcatttccc 43786871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 858658 - 858589
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||||||||||||||||||||| ||| | | |||||||||| || |||||||||    
T  858658 attaactactatataatttcctttttcatatccttaactagtgcactgggggcaccggtttgcatttccc 858589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 40362697 - 40362766
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||| |||||||||||||||| |||| |||||| ||||| | ||||||||||||    
T  40362697 attaactactatataatttcttttttcatatccttaatcagtgccccggaggcacgggttagcatttccc 40362766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 52246651 - 52246582
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||| ||||||||||||| ||||||||||||||||||||| |||||| ||||||  ||||||||||||    
T  52246651 attaacaactatataatttcatttttcatatccttaaccagtgccccggaggcaccagttagcatttccc 52246582  T

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Target: chr3; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 52718236 - 52718168
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||||||||||||||||||||||||||||||||||||||||   ||||| ||||||||||| |||||||    
T  52718236 attaactactatataatttcctttttcatatccttaaccagt-gtccgggagcaccgattagtatttccc 52718168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 41554057 - 41554107
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggg 51  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  41554057 attaactactatataatttcctttttcatatccttaaccagtgcaccgggg 41554107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 2119500 - 2119431
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||||||||||||||| ||||||||| || || || ||||| ||| ||||||||    
T  2119500 attaactactatataatttcctttttcatatctttaaccagtgcctcgaggacaccggttaacatttccc 2119431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 23925349 - 23925280
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||| |||||||||||||||||||| |||| |||||||||| ||||||||| |||  ||||||||||||    
T  23925349 attaattactatataatttccttttttatattcttaaccagttccccgggggtaccagttagcatttccc 23925280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 2362861 - 2362801
Alignment:
Q  10 tatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||||||||||||||||||||||||||||| | | ||||| |||||| ||||||||||||    
T  2362861 tatataatttcctttttcatatccttaaccattgcaccgggagcaccggttagcatttccc 2362801  T

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Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 7468480 - 7468428
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggc 53  Q
    ||||||||||||||||||||||||||||| ||||||||||||  |||||||||    
T  7468480 attaactactatataatttcctttttcatttccttaaccagtgtcccgggggc 7468428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 50395679 - 50395742
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagca 64  Q
    |||||||||| |||||||| ||||||||||||| ||||||||  ||||||||||||| ||||||    
T  50395679 attaactactgtataattttctttttcatatccctaaccagtgtcccgggggcaccggttagca 50395742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 2391676 - 2391630
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtacccc 47  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||    
T  2391676 attaactactatataatttcctttttcttatccttaaccagtgcccc 2391630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 2393437 - 2393391
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtacccc 47  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||    
T  2393437 attaactactatataatttcctttttcttatccttaaccagtgcccc 2393391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 10617401 - 10617469
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||||||||| |||||||||| ||||   |||||||||||| ||| ||||||||    
T  10617401 attaactactatataatttccttttttatatccttaatcagt-gtccgggggcaccggttaacatttccc 10617469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 28139378 - 28139309
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||| ||||||| |||||||||||||||||||||  |  |||||||||  ||||||||||||    
T  28139378 attaactactatttaatttcttttttcatatccttaaccagtgtcttgggggcaccagttagcatttccc 28139309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 42964366 - 42964414
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgg 49  Q
    ||||||||||||| |||||| ||||||||||||||||||||| ||||||    
T  42964366 attaactactataaaatttcatttttcatatccttaaccagtgccccgg 42964414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 38
Target Start/End: Complemental strand, 22248953 - 22248918
Alignment:
Q  3 taactactatataatttcctttttcatatccttaac 38  Q
    ||||||||||||||||||||||||||||||||||||    
T  22248953 taactactatataatttcctttttcatatccttaac 22248918  T

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Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 43269856 - 43269923
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttc 68  Q
    |||||||||||| |||||||| |||||||||||||||||||| | |||  ||||||| ||| ||||||    
T  43269856 attaactactatgtaatttcccttttcatatccttaaccagtgctccgaaggcaccggttaacatttc 43269923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 2938157 - 2938207
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggg 51  Q
    ||||||||||||||||||| |||||| ||||| ||||||||||||| ||||    
T  2938157 attaactactatataattttcttttttatatctttaaccagtacccagggg 2938207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 49529390 - 49529451
Alignment:
Q  5 actactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcattt 67  Q
    |||| |||||||||| ||||||||||||||||| |||| |||| ||||||||||||| |||||    
T  49529390 actagtatataattttctttttcatatccttaatcagtgcccc-ggggcaccgattatcattt 49529451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 2505416 - 2505379
Alignment:
Q  3 taactactatataatttcctttttcatatccttaacca 40  Q
    |||||||||||||||||||||||||||||| |||||||    
T  2505416 taactactatataatttcctttttcatatctttaacca 2505379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 11308327 - 11308396
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||| ||||||||||||||||||| |||||||| ||||  |||||   ||||| ||||||||||||    
T  11308327 attaactattatataatttcctttttcacatccttaatcagtgtcccggaaacaccggttagcatttccc 11308396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 27994417 - 27994486
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||| ||||||| |||||| |||||  |||||||||||||| ||||||||||| || ||| ||||||||    
T  27994417 attaattactataaaatttcttttttagtatccttaaccagtgccccgggggcatcggttaacatttccc 27994486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 29241706 - 29241669
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaac 38  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  29241706 attaactactatataatttccattttcatatccttaac 29241669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 42548164 - 42548123
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagt 42  Q
    |||||||||||||||||||| ||||||||||| |||| ||||    
T  42548164 attaactactatataatttcttttttcatatctttaagcagt 42548123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 24488435 - 24488383
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggc 53  Q
    |||||||| ||||||||||||||||| | || |||||||||| |||| |||||    
T  24488435 attaactattatataatttccttttttacattcttaaccagtgccccaggggc 24488383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 7e-27; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 561635 - 561704
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  561635 attaactactatataatttcctttttcatatccttaaccagtgccccgggggcaccggttagcatttccc 561704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 30486279 - 30486210
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||    
T  30486279 attaactactatataatttcctttttcatatccttaaccagtgccccgggggcaccagttagcatttccc 30486210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 20553000 - 20552931
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||    
T  20553000 attaattactatataatttcctttttcatatccttaaccagtgcccccggggcaccggttagcatttccc 20552931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 31438715 - 31438646
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||    
T  31438715 attaactactgtataatttcctttttcatatccttaaccagtgccccgggagcaccggttagcatttccc 31438646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 44587971 - 44587902
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||||||||| |||||||||||| || |||||||||||||| ||||||||||||    
T  44587971 attaactactatataatttccttttttatatccttaaccggtgccccgggggcaccggttagcatttccc 44587902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 4381864 - 4381798
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcattt 67  Q
    |||||||||||||||||||||||||||||| ||||||||||| | |||||||||||| |||||||||    
T  4381864 attaactactatataatttcctttttcatacccttaaccagtgcaccgggggcaccggttagcattt 4381798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 31390081 - 31390012
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||  ||||||||||||    
T  31390081 attaactactatataatttcctttttcatatccttaactagtgccccggaggcaccagttagcatttccc 31390012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 32360986 - 32361055
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||| |||||||||| |||||||| ||||||||||||| |||||||||||||| ||||||||||||    
T  32360986 attaactattatataattttctttttcacatccttaaccagtgccccgggggcaccggttagcatttccc 32361055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 70
Target Start/End: Original strand, 22068438 - 22068505
Alignment:
Q  3 taactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||||||   ||||||||||||    
T  22068438 taactactatataattccctttttcatatccttaaccagtgccccgggggcacttgttagcatttccc 22068505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 1859231 - 1859162
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||||||||||| |||||| ||||| ||||||||||||| |||||||||||||||  ||||||||||||    
T  1859231 attaactactatacaatttctttttttatatccttaaccattaccccgggggcaccagttagcatttccc 1859162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 6580258 - 6580189
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||||||||||||| |||||||||||||| ||||||||||| |||| ||||||| | ||||||||||||    
T  6580258 attaactactatatagtttcctttttcatacccttaaccagtgcccccggggcactggttagcatttccc 6580189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 22887819 - 22887750
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||| ||||||||||||||||||| | |||||| |||| || ||||||||||||    
T  22887819 attaactactatataatttcttttttcatatccttaaccactgccccggaggcatcggttagcatttccc 22887750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 26387181 - 26387250
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||||||||||||||||||||| |||||  ||| ||||||  ||||||||||||    
T  26387181 attaactactatataatttcctttttcatatccttaacaagtacttcggaggcaccagttagcatttccc 26387250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 26891780 - 26891849
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||| ||||||||||||||||| |||||||||| ||||  ||||||||||||| ||||||||||||    
T  26891780 attaactaatatataatttccttttttatatccttaatcagtgtcccgggggcaccggttagcatttccc 26891849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 27856513 - 27856582
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||| |||||||||||||||||||||  |||||||||| |||||||||||||| ||| ||||||||    
T  27856513 attaactattatataatttcctttttcatactcttaaccagtgccccgggggcaccggttaacatttccc 27856582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 38590991 - 38591060
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||| |||||||||||||||||||| |||||||||| |||| ||| ||||| ||||||||||||    
T  38590991 attaactactgtataatttcctttttcatattcttaaccagtgccccagggacaccggttagcatttccc 38591060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 32860171 - 32860102
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||| |||||||||||||||||||| |||||||||||| || |||| ||||||||| ||| ||||||||    
T  32860171 attaaatactatataatttccttttttatatccttaacccgtgcccccggggcaccggttaacatttccc 32860102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 43637233 - 43637165
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||||||||||||||||||||| ||||||||||||||||||  | | ||||||||| ||||||||||||    
T  43637233 attaactactatataatttccttattcatatccttaaccagtgtctc-ggggcaccggttagcatttccc 43637165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 3668230 - 3668295
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcattt 67  Q
    ||||||||||||||||||||||||| |||| |||||||||||   |||||||||||| |||||||||    
T  3668230 attaactactatataatttccttttccatacccttaaccagt-gtccgggggcaccggttagcattt 3668295  T

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Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 5881286 - 5881248
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaacc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  5881286 attaactactatataatttcctttttcatatccttaacc 5881248  T

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Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 8969524 - 8969591
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||||||||||||||||| |||||||||||||||||| ||| |||  ||||||| | ||||||||||||    
T  8969524 attaactactatataattttctttttcatatccttaactagtgccc--ggggcactggttagcatttccc 8969591  T

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Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 2898140 - 2898099
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagt 42  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  2898140 attaactactatataattttctttttcatatccttaaccagt 2898099  T

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Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 22567671 - 22567630
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagt 42  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  22567671 attaactactatataatttcttttttcatatccttaaccagt 22567630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 34123141 - 34123210
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||| ||||||||||| |||||  ||| || |||||||||||||| ||||||| ||||||||||||    
T  34123141 attaactattatataatttcttttttagtatgctcaaccagtaccccggaggcaccggttagcatttccc 34123210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 34442649 - 34442717
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||||||||||||||| | ||||||||||||||||||  || |||| ||||||||| ||||||||||||    
T  34442649 attaactactatataatcttctttttcatatccttaacatgtgcccc-ggggcaccggttagcatttccc 34442717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 44854369 - 44854310
Alignment:
Q  10 tatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||  ||||||||||||| | ||||||||||||| ||||||||||||    
T  44854369 tatataatttcctttttattatccttaaccagga-cccgggggcaccggttagcatttccc 44854310  T

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Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 29771476 - 29771417
Alignment:
Q  11 atataatttcctttttcat-atccttaaccagtaccccgggggcaccgattagcatttcc 69  Q
    |||||||||||||||| || ||||||||||||| ||||||||||| || |||||||||||    
T  29771476 atataatttccttttttattatccttaaccagtgccccgggggcatcggttagcatttcc 29771417  T

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Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 70
Target Start/End: Original strand, 44854467 - 44854526
Alignment:
Q  11 atataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||||||||||||||  |||||||||||||| ||||||| | |||| ||||||||||||    
T  44854467 atataatttcctttttattatccttaaccagtgccccgggagtaccggttagcatttccc 44854526  T

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Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 4022596 - 4022664
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||| ||||||| |||||||||| ||||| ||||| |||| |||||||  ||||||||||||    
T  4022596 attaactactat-taatttcttttttcatattcttaatcagtatcccgtgggcaccagttagcatttccc 4022664  T

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Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 5093656 - 5093693
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaac 38  Q
    |||||||||||| |||||||||||||||||||||||||    
T  5093656 attaactactatttaatttcctttttcatatccttaac 5093693  T

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Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 27584806 - 27584769
Alignment:
Q  2 ttaactactatataatttcctttttcatatccttaacc 39  Q
    |||||||||||||||||||| |||||||||||||||||    
T  27584806 ttaactactatataatttcccttttcatatccttaacc 27584769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 46
Target Start/End: Original strand, 13574155 - 13574191
Alignment:
Q  10 tatataatttcctttttcatatccttaaccagtaccc 46  Q
    |||||| ||||||||||||||||||||||||||||||    
T  13574155 tatatattttcctttttcatatccttaaccagtaccc 13574191  T

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Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 28012077 - 28012140
Alignment:
Q  7 tactatataattt-cctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||||||||||| ||||||| |||||||||||||||| ||| ||||||||| ||| ||||||||    
T  28012077 tactatataattttcctttttaatatccttaaccagtatccc-ggggcaccggttatcatttccc 28012140  T

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Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 28601034 - 28600990
Alignment:
Q  3 taactactatataatttcctttttcatatccttaaccagtacccc 47  Q
    |||||||| ||||||| ||||||||||||||||||||||| ||||    
T  28601034 taactactttataattccctttttcatatccttaaccagtgcccc 28600990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 35851868 - 35851906
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaacc 39  Q
    |||||||| ||||||||||||||||||| ||||||||||    
T  35851868 attaactattatataatttcctttttcacatccttaacc 35851906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 70
Target Start/End: Original strand, 35851917 - 35851955
Alignment:
Q  32 ccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||||||||| |||||||||||||| ||||||||||||    
T  35851917 ccttaaccagtgccccgggggcaccggttagcatttccc 35851955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 38296246 - 38296200
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtacccc 47  Q
    ||||| ||||||||||||| |||||||||||| ||||||||| ||||    
T  38296246 attaattactatataattttctttttcatatctttaaccagtgcccc 38296200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 39531893 - 39531824
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||||||||||||||||||||||||  |||  ||| |||||||||||| || |||  ||| ||||||||    
T  39531893 attaactactatataatttcctttttagtatgtttacccagtaccccggagggaccatttaacatttccc 39531824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 39
Target Start/End: Complemental strand, 43993214 - 43993185
Alignment:
Q  10 tatataatttcctttttcatatccttaacc 39  Q
    ||||||||||||||||||||||||||||||    
T  43993214 tatataatttcctttttcatatccttaacc 43993185  T

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Target: scaffold0003 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 53802 - 53871
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||    
T  53802 attaactactatataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccc 53871  T

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Target: chr8 (Bit Score: 58; Significance: 2e-24; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 30675689 - 30675758
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||    
T  30675689 attaactactatataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccc 30675758  T

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Target: chr8; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 20831670 - 20831737
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttc 68  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||    
T  20831670 attaactactatataatttcctttttcatatccttaaccagtgtcccgggggcaccggttagcatttc 20831737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 13643081 - 13643015
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcattt 67  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||    
T  13643081 attaactactatataatttcctttttcgtatccttaaccagtgccccgggggcaccggttagcattt 13643015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 13743506 - 13743440
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcattt 67  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||    
T  13743506 attaactactatataatttcctttttcgtatccttaaccagtgccccgggggcaccggttagcattt 13743440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 168535 - 168466
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||| ||||||||||||    
T  168535 attaactactatataatttcctttttcatacccttaaccagtgccccggaggcaccggttagcatttccc 168466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 12652699 - 12652630
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||||||||||||||||||||||||| | || ||||||||| ||||||||||||    
T  12652699 attaactactatataatttcctttttcatatccttaaccagtgctccaggggcaccggttagcatttccc 12652630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 27988616 - 27988685
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||    
T  27988616 attaactattatataatttcctttttcatatccttaaccagtgccccggaggcaccggttagcatttccc 27988685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 28045918 - 28045987
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||    
T  28045918 attaactattatataatttcctttttcatatccttaaccagtgccccggaggcaccggttagcatttccc 28045987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 33357246 - 33357315
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||  ||||||||||||    
T  33357246 attaactactatataatttcctttttcatatccttaaccagtgctccgggggcaccagttagcatttccc 33357315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 34228751 - 34228682
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||    
T  34228751 attaattactatataatttcctttttcatatccttaaccagtgcccccggggcaccggttagcatttccc 34228682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 4537861 - 4537930
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||||| ||| ||||||||||||||| |||||| ||||||| ||||||||||||    
T  4537861 attaactactatataatttcctattttatatccttaaccagtgccccggaggcaccggttagcatttccc 4537930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 16394178 - 16394247
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||| |||||||||| |||||||| ||||||||||||| |||||||||||||| ||||||||||||    
T  16394178 attaactattatataattttctttttcacatccttaaccagtgccccgggggcaccggttagcatttccc 16394247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 16888661 - 16888728
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttcc 69  Q
    ||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||| |||||||||||    
T  16888661 attaactactatataatttcctttttcatatccttaacctgt-gcccgggggcaccggttagcatttcc 16888728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 42035098 - 42035154
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccg 57  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  42035098 attaactactatataatttcctttttcatatccttaaccagtgctccgggggcaccg 42035154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 9537941 - 9538007
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcattt 67  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | | || ||| ||||||||||    
T  9537941 attaactactatataatttcctttttcatatccttaaccagtaccacagaggaaccaattagcattt 9538007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 2805377 - 2805446
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||| |||||||||||||||||||||||||||||||||  ||||||||||| | ||| ||||||||    
T  2805377 attaactattatataatttcctttttcatatccttaaccagtgtcccgggggcactggttaacatttccc 2805446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 4648263 - 4648195
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||| ||| ||||| ||||||||||||    
T  4648263 attaactactatataatttcctttttcatatccttaatcagtgcccc-gggacaccggttagcatttccc 4648195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 9063169 - 9063237
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||||||||||||||||||||||||| | || ||| ||||| ||||||||||||    
T  9063169 attaactactatataatttcctttttcatatccttaaccagtgctcc-gggacaccggttagcatttccc 9063237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 11112708 - 11112639
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||  |||||  ||||||||||||    
T  11112708 attaactactatataatttcctttttcatatccttaaccagtgtcccggatgcaccagttagcatttccc 11112639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 12203923 - 12203855
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||| ||||||||| |||||||| ||| ||||||||||||| ||||||||||||    
T  12203923 attaactactatataatttcttttttcatacccttaaccggta-cccgggggcaccggttagcatttccc 12203855  T

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Target: chr8; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 12448351 - 12448283
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||| ||||||||| |||||||| ||| ||||||||||||| ||||||||||||    
T  12448351 attaactactatataatttcttttttcatacccttaaccggta-cccgggggcaccggttagcatttccc 12448283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 29444258 - 29444323
Alignment:
Q  2 ttaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcattt 67  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||| |||||| ||| |||||    
T  29444258 ttaactactatataatttcctttttcatatccttaatcagtgccccgggagcaccggttaacattt 29444323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 32113977 - 32113908
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||||||||||||||||||||||| ||| |||| | ||||| ||||||| ||||    
T  32113977 attaactactatataatttcctttttcatatccttaaccaatactccggagacaccggttagcatctccc 32113908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 37373274 - 37373206
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||| |||||||||||||||||||||||||||||||||   |||||||||||| ||||||||||||    
T  37373274 attaactattatataatttcctttttcatatccttaaccagt-gtccgggggcaccggttagcatttccc 37373206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 43119286 - 43119217
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||||||||||||||||| |||||||||||| |||| |||| ||||| |||||||| ||||||||||||    
T  43119286 attaactactatataattttctttttcatatctttaatcagtgccccgagggcaccggttagcatttccc 43119217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 21595915 - 21595848
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttcc 69  Q
    ||||||| |||||||||||||||||||||| |||||||||||  ||||||||||||| |||||||||||    
T  21595915 attaactcctatataatttcctttttcatacccttaaccagt-gcccgggggcaccggttagcatttcc 21595848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 3930350 - 3930418
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||||| ||||||||  ||||| |||  ||||||||||||||||||||||||||    
T  3930350 attaactactatataatttcctctttcatattattaactagt-gcccgggggcaccgattagcatttccc 3930418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 9254018 - 9254068
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggg 51  Q
    ||||||||||||| |||||| ||||||||||||||||||||| ||||||||    
T  9254018 attaactactataaaatttcatttttcatatccttaaccagtgccccgggg 9254068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 10618087 - 10618021
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcattt 67  Q
    ||||||||||||||||||| ||||||||||||||||||| || |||  | ||||||| |||||||||    
T  10618087 attaactactatataattttctttttcatatccttaacctgtgccctagaggcaccggttagcattt 10618021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 16785155 - 16785087
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||||| |||||||||||| |||||||||||||||||||||  ||| || |||||| ||||||||||||    
T  16785155 attaactgctatataatttcttttttcatatccttaaccagt-gccctggagcaccggttagcatttccc 16785087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 16890597 - 16890634
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaac 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  16890597 attaactactatataatttcctttttcatatccttaac 16890634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 36730513 - 36730476
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaac 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  36730513 attaactactatataatttcctttttcatatccttaac 36730476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 39751605 - 39751658
Alignment:
Q  17 tttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||||||||  |||||||||||||| |||||||||||||| ||||||||||||    
T  39751605 tttcctttttattatccttaaccagtgccccgggggcaccggttagcatttccc 39751658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 70
Target Start/End: Original strand, 36923782 - 36923849
Alignment:
Q  3 taactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||| |||||||||||||||||||||||||||| |||| || ||| |||| || |||| |||||||    
T  36923782 taactattatataatttcctttttcatatccttaatcagtgcctcggaggcagcggttagtatttccc 36923849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 28626837 - 28626799
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaacc 39  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  28626837 attaactactatataatttcctttttcacatccttaacc 28626799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 30933451 - 30933517
Alignment:
Q  3 taactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttcc 69  Q
    |||||||||||||||||||||||| ||||  |||||||||||||| | | ||||| ||| |||||||    
T  30933451 taactactatataatttcctttttaatatgtttaaccagtaccccagagacaccggttaacatttcc 30933517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 9278281 - 9278212
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||| ||||||||||||||||||||||| ||||| |||  ||| | ||||||  ||||||||||||    
T  9278281 attaactattatataatttcctttttcatatctttaacgagtgtccctgaggcaccagttagcatttccc 9278212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 29235304 - 29235235
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||| ||||| |||||||||| || | | |||||  ||||| ||||||||||||    
T  29235304 attaactactatataatttctttttttatatccttaatcaatgctccgggaacaccggttagcatttccc 29235235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 40831346 - 40831305
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagt 42  Q
    ||||||||||||||||||| |||||||||||| |||||||||    
T  40831346 attaactactatataattttctttttcatatctttaaccagt 40831305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 7304635 - 7304671
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaa 37  Q
    ||||||||||||||||||| |||||||||||||||||    
T  7304635 attaactactatataattttctttttcatatccttaa 7304671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 29566760 - 29566700
Alignment:
Q  11 atataatttcctttttcat-atccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||||||||| |||| || |||||||||| || |||||||||||||| ||||||||||||    
T  29566760 atataatttccctttttattatccttaacccgtgccccgggggcaccggttagcatttccc 29566700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 2490315 - 2490375
Alignment:
Q  10 tatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||| || |||||||  ||||||||||| || |||||| ||||||| ||||||||||||    
T  2490315 tatatatttccctttttattatccttaacctgtgccccggaggcaccggttagcatttccc 2490375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 5725590 - 5725646
Alignment:
Q  14 taatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||  |||| ||||||||| | |||| ||||||| ||||||||||||    
T  5725590 taatttcctttttattatctttaaccagttcaccggaggcaccggttagcatttccc 5725646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 2e-24; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 392165 - 392096
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||    
T  392165 attaactactatataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccc 392096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 12525788 - 12525719
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||    
T  12525788 attaactactatataatttcctttttcatacccttaaccagtaccccggaggcaccggttagcatttccc 12525719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 20898017 - 20897948
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||    
T  20898017 attaactactatataatttcctttttcatatccttaaccagtgccctgggggcaccggttagcatttccc 20897948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 27433561 - 27433492
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||    
T  27433561 attaactactatataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccc 27433492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 2350721 - 2350654
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttc 68  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||    
T  2350721 attaactactatataatttcctttttcatatccttaaccagtgccccgggagcaccggttagcatttc 2350654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 3515835 - 3515766
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||| ||||||||||||    
T  3515835 attaactactatataatttcctttttcatacccttaaccagtgccctgggggcaccggttagcatttccc 3515766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 1391295 - 1391363
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| || |||||| ||||||||||||    
T  1391295 attaactactatataatttcctttttcatatccttaatcagtacccc-ggagcaccggttagcatttccc 1391363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 7851276 - 7851345
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||| ||||||||||||| |||||||||||||||||||||| ||| |||||||||| ||||||||||||    
T  7851276 attaattactatataattttctttttcatatccttaaccagtgccctgggggcaccggttagcatttccc 7851345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 12145234 - 12145303
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||||||||||||||||||||| ||| | | |||||||||| ||||||||||||    
T  12145234 attaactactatataatttcctttttcatatccttaacaagtgcactgggggcaccggttagcatttccc 12145303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 21878464 - 21878533
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||||||||||||||||||||||||||||||||||||| || ||| || ||||||| ||||||||||||    
T  21878464 attaactactatataatttcctttttcatatccttaacccgtgcccgggaggcaccggttagcatttccc 21878533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 23402207 - 23402138
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||  ||||||||||||    
T  23402207 attaattactatataatttcctttttcatatccttaaccagtgccccggaggcaccagttagcatttccc 23402138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 34396644 - 34396713
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||||||||||||||||||||||||||||||||||||| ||  || |||||||||| ||||||||||||    
T  34396644 attaactactatataatttcctttttcatatccttaacctgtgtcctgggggcaccggttagcatttccc 34396713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 2581021 - 2580952
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||||||||| ||||| |||||||||||| |  |||||||| ||||||||||||    
T  2581021 attaactactatataatttccttttttatatcattaaccagtacctcaagggcaccggttagcatttccc 2580952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 4215764 - 4215695
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||| |||||||||||||||||||||  |||||||||| |||||||||||||| ||| ||||||||    
T  4215764 attaactattatataatttcctttttcatactcttaaccagtgccccgggggcaccggttaacatttccc 4215695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 32929625 - 32929694
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||| || ||||||||||||||||||||| ||||||||| | |||||||||||||| ||||||||||||    
T  32929625 attaattaatatataatttcctttttcatacccttaaccattgccccgggggcaccggttagcatttccc 32929694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 18276732 - 18276782
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggg 51  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  18276732 attaactactatataatttcctttttcatatccttaaccagtgcccagggg 18276782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 32985310 - 32985376
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcattt 67  Q
    |||||||||||||||||||||||||| ||||||||||||| | ||||| |||||||| || ||||||    
T  32985310 attaactactatataatttccttttttatatccttaaccaatgccccgagggcaccggtttgcattt 32985376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 34477667 - 34477717
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggg 51  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  34477667 attaactactatataatttcctttttcatatccttaaccagtgcccggggg 34477717  T

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Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 13529524 - 13529455
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||  |||||   ||||||||||||    
T  13529524 attaactactatataatttcctttttcacatccttaaccagtgccccgaaggcacaagttagcatttccc 13529455  T

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Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 29451232 - 29451300
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||||||||||||||||||||||||||||||||||||| ||  ||||| ||||||  ||||||||||||    
T  29451232 attaactactatataatttcctttttcatatccttaaccggt-gcccggaggcaccagttagcatttccc 29451300  T

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Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 35043959 - 35043890
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||| |||||||||||||||||||||  |||| || ||||  ||||||||||||    
T  35043959 attaactactatataatttcttttttcatatccttaaccagtgtcccgtggacaccagttagcatttccc 35043890  T

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Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 26467241 - 26467288
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccg 48  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||    
T  26467241 attaactactatataatttcctttttcatatccttaaccggtgccccg 26467288  T

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Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 23629693 - 23629743
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggg 51  Q
    ||||||||||||||||||| ||||||||||||||||| |||| ||||||||    
T  23629693 attaactactatataattttctttttcatatccttaatcagtgccccgggg 23629743  T

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Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 29978301 - 29978233
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||| |||||||||||||||||||||||||||||||| |||   |||| ||||||| ||||||||||||    
T  29978301 attaaatactatataatttcctttttcatatccttaactagt-gtccggaggcaccggttagcatttccc 29978233  T

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Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 31280390 - 31280321
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||||||||||||   ||||| |||| || |||| |||||| ||||||||||||    
T  31280390 attaactactatataatttcctttttcattctcttaatcagtgcctcgggagcaccggttagcatttccc 31280321  T

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Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 11115212 - 11115267
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcacc 56  Q
    |||||||| ||||||||||||||||| ||||||||||||||| || ||||| ||||    
T  11115212 attaactattatataatttccttttttatatccttaaccagtgcctcggggacacc 11115267  T

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Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 25165530 - 25165569
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaacca 40  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  25165530 attaactactatataatttcttttttcatatccttaacca 25165569  T

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Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 3026126 - 3026193
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||| ||||||||| ||||||||| ||||||||||| |||  ||||||||  ||||||||||||    
T  3026126 attaactactgtataatttcatttttcatacccttaaccagtgccc--ggggcaccagttagcatttccc 3026193  T

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Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 13417079 - 13417116
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaac 38  Q
    |||||||| |||||||||||||||||||||||||||||    
T  13417079 attaactaatatataatttcctttttcatatccttaac 13417116  T

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Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 14559991 - 14559922
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||| |||||| |||| ||||||||||| |||| |||| |||||  ||||||| ||||||||||||    
T  14559991 attaactattatatattttcttttttcatatctttaatcagttccccgaaggcaccggttagcatttccc 14559922  T

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Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 28225289 - 28225221
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||| |||||||||||| |||||||||||||||||||| ||| ||| | ||||||  ||||||||||||    
T  28225289 attaattactatataatt-cctttttcatatccttaacccgtatcccagaggcaccagttagcatttccc 28225221  T

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Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 34851966 - 34852003
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaac 38  Q
    |||||||||||||||||||||||||||||||| |||||    
T  34851966 attaactactatataatttcctttttcatatctttaac 34852003  T

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Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 70
Target Start/End: Original strand, 34712252 - 34712312
Alignment:
Q  11 atataatttcctttttcat-atccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||||||||| |||| || ||||||||||||| |||||| ||||||| ||||||||||||    
T  34712252 atataatttccctttttattatccttaaccagtgccccggaggcaccggttagcatttccc 34712312  T

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Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 9661055 - 9660988
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttc 68  Q
    |||||||| ||| ||||||| |||||||||||||||||  || || || |||||||| ||||||||||    
T  9661055 attaactattatgtaatttcttttttcatatccttaactggtgccacgagggcaccggttagcatttc 9660988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 5323468 - 5323400
Alignment:
Q  2 ttaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||| |||||||||||||||||||| |||| ||||| |||| | |   |||||| ||||||||||||||    
T  5323468 ttaattactatataatttccttttttatattcttaatcagtgctcatagggcactgattagcatttccc 5323400  T

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Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 34706780 - 34706720
Alignment:
Q  11 atataatttcctttttcat-atccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||||||||| |||| || |||||||||| || |||| ||||||||| ||||||||||||    
T  34706780 atataatttccctttttattatccttaaccggtgcccccggggcaccggttagcatttccc 34706720  T

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Target: chr4 (Bit Score: 58; Significance: 2e-24; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 7769007 - 7768938
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||    
T  7769007 attaactactatataatttcctttttcatacccttaaccagtgccccgggggtaccgattagcatttccc 7768938  T

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Target: chr4; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 15186312 - 15186243
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||    
T  15186312 attaactactatataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccc 15186243  T

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Target: chr4; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 18067996 - 18068065
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||    
T  18067996 attaactactatataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccc 18068065  T

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Target: chr4; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 54897377 - 54897308
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||    
T  54897377 attaactactatataatttcctttctcatatccttaaccagtgccccgggggcaccggttagcatttccc 54897308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 789647 - 789716
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||||||||||||| |||||||| || |||||||||||||| ||||||||||||    
T  789647 attaactactatataatttcctttttcatacccttaacccgtgccccgggggcaccggttagcatttccc 789716  T

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Target: chr4; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 4268939 - 4269008
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||| ||||||||||||    
T  4268939 attaactactatatagtttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccc 4269008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 12356313 - 12356244
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||||||||||||||||||||||||||||||||||||||||| | | ||||||||| ||||||||||||    
T  12356313 attaactactatataatttcctttttcatatccttaaccagtatctcaggggcaccggttagcatttccc 12356244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 32217114 - 32217045
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||  ||||||||||||    
T  32217114 attaactactatataatttccttttttatatccttaaccagtgccccgggggcaccagttagcatttccc 32217045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 43944576 - 43944507
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||| ||||||||||||    
T  43944576 attaactactatataatttcctttttcatacccttaaccagtgccccggaggcaccggttagcatttccc 43944507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 16536117 - 16536048
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||||||||||||| |||||| | || |||||||||||||| ||||||||||||    
T  16536117 attaactactatataatttcctttttcatacccttaatccgtgccccgggggcaccggttagcatttccc 16536048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 29591258 - 29591189
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||||||||||||||||||||| ||||||| |||||||||| |||||||||||||  ||||||||||||    
T  29591258 attaactactatataatttccttattcatattcttaaccagtgccccgggggcaccagttagcatttccc 29591189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 43202500 - 43202569
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||| |||||||||||||||||||||||| ||||||| ||| |||||||||||||| ||||||||||||    
T  43202500 attaattactatataatttcctttttcatacccttaactagtgccccgggggcaccggttagcatttccc 43202569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 47231989 - 47232058
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||| ||||||||||||||||||| ||||||||||||| | |||||||||||| ||||||||||||    
T  47231989 attaactattatataatttcctttttcacatccttaaccagtgctccgggggcaccggttagcatttccc 47232058  T

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Target: chr4; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 19503222 - 19503289
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttcc 69  Q
    |||||||| |||||||||||||||||||||||||||||||||| |||||| |||||| |||||||||||    
T  19503222 attaactagtatataatttcctttttcatatccttaaccagta-cccgggagcaccggttagcatttcc 19503289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 4089211 - 4089142
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||||||||||||||||| |||||||||| |||||| |||| |||| ||||||||| ||||||||||||    
T  4089211 attaactactatataattttctttttcatacccttaatcagtgccccaggggcaccggttagcatttccc 4089142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 4220264 - 4220195
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||  |||| || ||| ||||||||    
T  4220264 attaactactatataatttcctttttcatatccttaacccgtaccccgaaggcatcggttatcatttccc 4220195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 28755689 - 28755621
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||| ||| ||||| ||||||||||||    
T  28755689 attaactactatataatttcctttttcatatccttaaccagt-gccctgggacaccggttagcatttccc 28755621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 32202597 - 32202666
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||||||||| |||||||||||| || |||||||| ||||| ||| ||||||||    
T  32202597 attaactactatataatttccttttttatatccttaacccgtgccccggggacaccggttaacatttccc 32202666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 42898863 - 42898932
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||| ||  |||||||||| ||||||||    
T  42898863 attaactactatataatttccttttttatatccttaaccagtgccctggaagcaccgattaacatttccc 42898932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 54054617 - 54054548
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||| ||||||||||| |||||||||||||||||| || |||| ||||||||| ||||||||||||    
T  54054617 attaactattatataatttcttttttcatatccttaaccggtgcccccggggcaccggttagcatttccc 54054548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 3783618 - 3783687
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||| ||||||||||  |||||| || |||||| ||||||| ||||||||||||    
T  3783618 attaactactatataatttcatttttcatatgtttaaccggtgccccggaggcaccggttagcatttccc 3783687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 24679759 - 24679827
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||| | | ||||| ||||||||||||    
T  24679759 attaactactatataatttcttttttcatatccttaaccagtgcccc-gagacaccggttagcatttccc 24679827  T

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Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 33108790 - 33108858
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||| |||||||||||||||||||||| |||||||||| |||||| ||||||| ||| ||||||||    
T  33108790 attaactattatataatttcctttttcatat-cttaaccagtgccccggaggcaccggttaacatttccc 33108858  T

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Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 52533902 - 52533971
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||||||||||||||||||||||||||||| ||||||||||  || || ||||||| ||| ||||||||    
T  52533902 attaactactatataatttcctttttcatattcttaaccagtgtcctggaggcaccggttaacatttccc 52533971  T

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Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 50619155 - 50619089
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcattt 67  Q
    ||||||||||||||||||| ||||||||||| ||||| |||| ||||||| |||||  |||||||||    
T  50619155 attaactactatataattttctttttcatattcttaatcagtgccccgggagcaccagttagcattt 50619089  T

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Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 54655993 - 54656039
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtacccc 47  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||    
T  54655993 attaactactatataatttccttttttatatccttaaccagtgcccc 54656039  T

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Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 54945895 - 54945941
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtacccc 47  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||    
T  54945895 attaactgctatataatttcctttttcatatccttaaccagtgcccc 54945941  T

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Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 1432659 - 1432700
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagt 42  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  1432659 attaactattatataatttcctttttcatatccttaaccagt 1432700  T

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Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 37988004 - 37987959
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccc 46  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||    
T  37988004 attaactactatataatttcctttttcatacccttaaccattaccc 37987959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 39843976 - 39843912
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcat 65  Q
    |||||||||||||||||||| ||||||||||||||||||| | | | |  |||||||||||||||    
T  39843976 attaactactatataatttcatttttcatatccttaaccaatgctctgaaggcaccgattagcat 39843912  T

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Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 42815178 - 42815135
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtac 44  Q
    ||||||||  ||||||||||||||||||||||||||||||||||    
T  42815178 attaactatgatataatttcctttttcatatccttaaccagtac 42815135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 30154280 - 30154328
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccggg 50  Q
    ||||||||||||||||||||||||||||||| |||||| ||| |||||||    
T  30154280 attaactactatataatttcctttttcatat-cttaactagtgccccggg 30154328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 55882752 - 55882684
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||| |||||||||||||  ||||||||||||||||| ||| |||||| | ||||| ||||||||||||    
T  55882752 attaattactatataatttt-tttttcatatccttaacgagtgccccggagacaccggttagcatttccc 55882684  T

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Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 70
Target Start/End: Original strand, 46688348 - 46688396
Alignment:
Q  22 tttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||||||||||||||||||| || ||||||||||  ||||||||||||    
T  46688348 tttttcatatccttaaccagtgcctcgggggcaccagttagcatttccc 46688396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 36395168 - 36395129
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaacca 40  Q
    |||||||||||||||||||||||||||||||  |||||||    
T  36395168 attaactactatataatttcctttttcatatttttaacca 36395129  T

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Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 50167649 - 50167591
Alignment:
Q  12 tataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||| |||||||||||| ||||||||| ||||| |  ||||| ||||||||||||    
T  50167649 tataattttctttttcatatctttaaccagtgccccgagaacaccggttagcatttccc 50167591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 52697121 - 52697083
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaacc 39  Q
    |||||||||||||||||||  ||||||||||||||||||    
T  52697121 attaactactatataattttgtttttcatatccttaacc 52697083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 6164162 - 6164094
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||||||||||||||||| | |||| ||||||||||||||| ||||  | |||||| ||| ||||||||    
T  6164162 attaactactatataattttc-ttttgatatccttaaccagtgccccaagagcaccggttatcatttccc 6164094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 41265528 - 41265459
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||||||||||||||||| | ||||  ||| |||||| |||  ||||||| ||||||||| ||||||||    
T  41265528 attaactactatataattttcattttagtatgcttaactagtgtcccggggacaccgattaacatttccc 41265459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 49915228 - 49915159
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||| |||||||||| || ||||||||||||||||| |||| | || ||||| ||| || |||||||||    
T  49915228 attaattactatataaatttctttttcatatccttaatcagtgcaccaggggcgccggtttgcatttccc 49915159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 53655995 - 53656032
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaac 38  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  53655995 attaactattatataatttcttttttcatatccttaac 53656032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 22225882 - 22225930
Alignment:
Q  20 cctttttcatatccttaaccagtaccccgggggcaccgattagcatttc 68  Q
    |||||||  ||||||||||||||  ||||||||||||| ||||||||||    
T  22225882 cctttttattatccttaaccagtgtcccgggggcaccggttagcatttc 22225930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 2e-24; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 3097728 - 3097659
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||    
T  3097728 attaactactatataatttcctttttcatatccttaaccaggactccgggggcaccaattagcatttccc 3097659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 29657840 - 29657771
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||    
T  29657840 attaactactatataatttccttttttatatccttaaccagtgccccgggggcaccggttagcatttccc 29657771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 3784830 - 3784899
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||||||||||||||||||||||||| | | ||||||||||||| |||||||||    
T  3784830 attaactactatataatttcctttttcatatccttaaccagtgcactgggggcaccgatttgcatttccc 3784899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 17333399 - 17333467
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||||    
T  17333399 attaactactatataatttcctttttcatatccttaaccagt-gcccgggggcaccggttagcatttccc 17333467  T

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Target: chr1; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 24178580 - 24178649
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||    
T  24178580 attaactattatataatttcctttttcatatccttaaccagtgccccgggggcatcggttagcatttccc 24178649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 29210482 - 29210413
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||| ||||||||||||    
T  29210482 attaactactatataatttcctttttcatacccttaaccagtgccccggaggcaccggttagcatttccc 29210413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 30294498 - 30294567
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||||||||||||||||||||||| | | |||||| ||||||||||||||||||    
T  30294498 attaactactatataatttcctttttcatatccttaaccaatgctccggggacaccgattagcatttccc 30294567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 42770107 - 42770176
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||||||||||||| | ||||||||| |||||||||||||| ||||||||||||    
T  42770107 attaactactatataatttcctttttcataccattaaccagtgccccgggggcaccggttagcatttccc 42770176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 47010062 - 47009993
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||  |||||||||||||||||||    
T  47010062 attaactactatataatttcctttttcatatccttaaccagtgctccggatgcaccgattagcatttccc 47009993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 12072179 - 12072245
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcattt 67  Q
    ||||||||||| ||||||||||||||||||||||||||| || |||||||||||||| |||||||||    
T  12072179 attaactactacataatttcctttttcatatccttaaccggtgccccgggggcaccggttagcattt 12072245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 5694390 - 5694321
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||||||||||||||||||| |||| ||||||||||||||| |||||| ||||||| ||||||||||||    
T  5694390 attaactactatataatttccctttttatatccttaaccagtgccccggaggcaccggttagcatttccc 5694321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 15227808 - 15227739
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||| |||| |||| ||||||||||||    
T  15227808 attaattactatataatttcctttttcatatccttaaccagtgcccccggggtaccggttagcatttccc 15227739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 18043231 - 18043162
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||||||||| ||| ||||||||||| |||||| ||||||| ||||||||||||    
T  18043231 attaactactatataatttccttttttatacccttaaccagtgccccggaggcaccggttagcatttccc 18043162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 51065865 - 51065934
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||||||||||||||||| ||||||||||||||||||||||  ||||||| ||||| ||||||||||||    
T  51065865 attaactactatataatttactttttcatatccttaaccagtgtcccggggacaccggttagcatttccc 51065934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 51368902 - 51368971
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| || || |||| ||||||||||||    
T  51368902 attaactactatataatttcctttttcatacccttaaccagtaccctggaggtaccggttagcatttccc 51368971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 38702050 - 38702117
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttc 68  Q
    ||||||||||||||| |||||||||||||| ||||||||||| ||||||| |||||| ||||||||||    
T  38702050 attaactactatatagtttcctttttcatacccttaaccagtgccccgggagcaccggttagcatttc 38702117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 29683265 - 29683195
Alignment:
Q  1 attaactactatataatttcctttttc-atatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||||||||||||||||||||||||  ||||| ||||||||| |||||||||||||| ||||||||||||    
T  29683265 attaactactatataatttcctttttttatatctttaaccagtgccccgggggcaccggttagcatttccc 29683195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 9266845 - 9266914
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||| |||||||||||||||||||||||||||||||||||| || ||||| ||||| ||| ||||||||    
T  9266845 attaaatactatataatttcctttttcatatccttaaccagtgccgcggggacaccggttaacatttccc 9266914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 14350394 - 14350463
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||||||| |||||||||||||||||||| |||||||| || | |||||||||||| ||||||||||||    
T  14350394 attaactacaatataatttcctttttcatacccttaaccggtgctccgggggcaccggttagcatttccc 14350463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 30657677 - 30657608
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||| |||||||||| |||||| ||| ||||||| |||||| ||||||||||||    
T  30657677 attaactactatataatttcttttttcatatgcttaactagtgccccgggagcaccggttagcatttccc 30657608  T

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Target: chr1; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 38162919 - 38162850
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||||||||||||||||| |||||||||| ||||||||||| |||||| ||||||| ||| ||||||||    
T  38162919 attaactactatataattttctttttcatacccttaaccagtgccccggaggcaccggttaacatttccc 38162850  T

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Target: chr1; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 45431347 - 45431279
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||||||||||||||||||||||||||||||||||| |||  ||| |||||||||| ||||||||||||    
T  45431347 attaactactatataatttcctttttcatatccttaatcag-gccctgggggcaccggttagcatttccc 45431279  T

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Target: chr1; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 19011113 - 19011180
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttcc 69  Q
    ||||||||||||||||||||||||||||||||||||||| || |||| ||| ||||| |||||||||||    
T  19011113 attaactactatataatttcctttttcatatccttaacccgtgcccc-gggacaccggttagcatttcc 19011180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 19031933 - 19032001
Alignment:
Q  2 ttaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||||||||||||||||||||||||||||||||||| | | |||| || |||||| ||||||||||||    
T  19031933 ttaactactatataatttcctttttcatatccttaactaatgcccccggagcaccggttagcatttccc 19032001  T

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Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 6770406 - 6770344
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagc 63  Q
    |||||||||||||||||||||||||||||||||||||  ||| |||||| ||||||| |||||    
T  6770406 attaactactatataatttcctttttcatatccttaattagtgccccggaggcaccggttagc 6770344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 13961280 - 13961212
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||  ||||| |||||||||||| || |||||||||||||| ||||||||||||    
T  13961280 attaactactatataatttttttttt-atatccttaacccgtgccccgggggcaccggttagcatttccc 13961212  T

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Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 47532787 - 47532855
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||||||||||||||||| ||||||||||||||||| |||||| |||| | ||||| ||||||||||||    
T  47532787 attaactactatataattttctttttcatatccttaa-cagtactccggagacaccggttagcatttccc 47532855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 48071551 - 48071483
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||| || ||| || ||||||||||||    
T  48071551 attaactattatataatttccttttacatatccttaaccagtacccc-ggagcatcggttagcatttccc 48071483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 14881086 - 14881138
Alignment:
Q  4 aactactatataatttcctttttcatatccttaaccagtaccccgggggcacc 56  Q
    ||||| |||||||||||||||||||||||||||||||||| | ||||||||||    
T  14881086 aactattatataatttcctttttcatatccttaaccagtatcacgggggcacc 14881138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 15282631 - 15282675
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtacc 45  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  15282631 attaactactatataattttctttttcatatccttaaccagtacc 15282675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 70
Target Start/End: Original strand, 28726032 - 28726092
Alignment:
Q  11 atataatttcctttttcat-atccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||| || ||||||||||||| |||||||||||||| ||||||||||||    
T  28726032 atataatttccttttttattatccttaaccagtgccccgggggcaccggttagcatttccc 28726092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 43286791 - 43286725
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcattt 67  Q
    |||||||| |||||||||||||||||||||||||||||||||  ||| ||| || || |||||||||    
T  43286791 attaactattatataatttcctttttcatatccttaaccagtgtcccagggacatcggttagcattt 43286725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 70
Target Start/End: Original strand, 38595879 - 38595939
Alignment:
Q  11 atataatttcctttttcat-atccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||||||||| |||| || ||||||||||||| |||||||||||||| ||||||||||||    
T  38595879 atataatttccctttttattatccttaaccagtgccccgggggcaccggttagcatttccc 38595939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 48383238 - 48383294
Alignment:
Q  11 atataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcattt 67  Q
    ||||||||| |||||||| ||||||||||||| ||||||| |||||| |||||||||    
T  48383238 atataattttctttttcacatccttaaccagtgccccgggagcaccggttagcattt 48383294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 23473581 - 23473648
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttc 68  Q
    ||||||| ||||||||| |||||||||||||||||||||| | |||| |||||| |  ||||||||||    
T  23473581 attaactgctatataatctcctttttcatatccttaaccaatgccccaggggcatcagttagcatttc 23473648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 70
Target Start/End: Complemental strand, 28481907 - 28481844
Alignment:
Q  7 tactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||| ||||||||||||||||||||||||||||||  |||  | ||||||| ||||||||||||    
T  28481907 tactgtataatttcctttttcatatccttaaccagggcccaagaggcaccggttagcatttccc 28481844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 36446442 - 36446496
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcacc 56  Q
    |||||||||||||||||||||||||| |||| |||||||||| || ||||||||||    
T  36446442 attaactactatataatttccttttt-atattcttaaccagtgcctcgggggcacc 36446496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 45449361 - 45449411
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggg 51  Q
    ||||||||||||||||||| |||||| ||||| ||||||| ||||||||||    
T  45449361 attaactactatataattttcttttttatatctttaaccaataccccgggg 45449411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 10976019 - 10976056
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaac 38  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  10976019 attaactactatataatctcctttttcatatccttaac 10976056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 35985738 - 35985779
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagt 42  Q
    |||||||||||||||||||||||||| |||||||||| ||||    
T  35985738 attaactactatataatttccttttttatatccttaaacagt 35985779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 38335238 - 38335197
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagt 42  Q
    ||||| |||||||||||||||||||||||||| |||||||||    
T  38335238 attaattactatataatttcctttttcatatctttaaccagt 38335197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 41730370 - 41730305
Alignment:
Q  5 actactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||| |||||||||| ||||||| || |||| ||||||||| |||  |||||||    
T  41730370 actactatataatttcttttttcatattcttaacccgtgcccctggggcaccggttaagatttccc 41730305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 52749671 - 52749602
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||| ||||||||||||||||||||||| ||||||| | ||||| ||  | || ||||||||||||    
T  52749671 attaactattatataatttcctttttcatatctttaaccaatgccccgcggatatcggttagcatttccc 52749602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 39497376 - 39497340
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaa 37  Q
    ||||||||||||||||||| |||||||||||||||||    
T  39497376 attaactactatataattttctttttcatatccttaa 39497340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 70
Target Start/End: Original strand, 52702272 - 52702332
Alignment:
Q  11 atataatttcctttttcat-atccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||||||||| |||| || ||||||||||||| ||||||| |||||| ||||||||||||    
T  52702272 atataatttccctttttattatccttaaccagtgccccgggagcaccggttagcatttccc 52702332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 8473031 - 8473070
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaacca 40  Q
    |||||||| ||||||||||||||||| |||||||||||||    
T  8473031 attaactattatataatttccttttttatatccttaacca 8473070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 35700767 - 35700809
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagta 43  Q
    |||||||||| |||||||||||||||  |||||||||||||||    
T  35700767 attaactactgtataatttcctttttagtatccttaaccagta 35700809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 26228262 - 26228221
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagt 42  Q
    |||||||||||||||||||| ||||| || ||||||||||||    
T  26228262 attaactactatataatttcattttttatctccttaaccagt 26228221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 39912396 - 39912465
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||| |||||||||||| |||| |||||||||| |||| ||||| | || ||| ||| ||||||||    
T  39912396 attaactagtatataatttccctttttatatccttaatcagtgccccgagtgcgccggttaacatttccc 39912465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 70
Target Start/End: Original strand, 27457077 - 27457137
Alignment:
Q  11 atataatttc-ctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||| ||||||  |||| ||||||  | |||||||||||||||||||||||||||    
T  27457077 atataatttcactttttattatctttaacccttgccccgggggcaccgattagcatttccc 27457137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 50128289 - 50128325
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaa 37  Q
    |||||||||||| |||||| |||||||||||||||||    
T  50128289 attaactactatgtaattttctttttcatatccttaa 50128325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 23030 - 22961
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||| |||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||    
T  23030 attaattactatataatttcctttttcatatccttaaccagtgctccgggggcaccggttagcatttccc 22961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 68407 - 68476
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||  ||||||||||||    
T  68407 attaactactatataatttcatttttcatatccttaaccagtgccccgggggcaccagttagcatttccc 68476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 4e-22; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 12218553 - 12218622
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||| ||||||||||||    
T  12218553 attaactactatataatttcctttttcatatacttatccagtgccccgggggcaccggttagcatttccc 12218622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 29993604 - 29993673
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||||||||||  ||||||||||||    
T  29993604 attaactactatataatttcctttttcatatccttaaccggtgccccgggggcacccgttagcatttccc 29993673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 34333353 - 34333284
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||| |||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||    
T  34333353 attaattactatataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccc 34333284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 34546431 - 34546500
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||| || ||||||||||||    
T  34546431 attaactactatataatttcctttttcatatccttaaccggtacctcgggggcatcggttagcatttccc 34546500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 4628635 - 4628566
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||||||||||||||||||||||||||||||||||||| || |||| |||||| || ||||||||||||    
T  4628635 attaactactatataatttcctttttcatatccttaaccggtgccccaggggcatcggttagcatttccc 4628566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 18486030 - 18485961
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||| |||||||||||||||||||  ||||||||||||||| |||||||||||||| ||||||||||||    
T  18486030 attaattactatataatttccttttcaatatccttaaccagtgccccgggggcaccggttagcatttccc 18485961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 24438546 - 24438477
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||||||||||||| |||||||||||||| ||||||| ||| |||||||||||||| ||||||||||||    
T  24438546 attaactactatatagtttcctttttcatacccttaactagtgccccgggggcaccggttagcatttccc 24438477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 34606330 - 34606261
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||  ||||||||||||    
T  34606330 attaattactatataatttcctttttcatatccttaaccagtgccccggaggcaccagttagcatttccc 34606261  T

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Target: chr7; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 5239354 - 5239285
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||||||||||||| | ||||||||| | |||| ||||||| ||||||||||||    
T  5239354 attaactactatataatttcctttttcataccattaaccagtgctccggaggcaccggttagcatttccc 5239285  T

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Target: chr7; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 8754702 - 8754771
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||| ||||||||||||||||||||| | ||  |||||||| ||||||||||||    
T  8754702 attaactactatataatttcatttttcatatccttaaccagtgctcccagggcaccggttagcatttccc 8754771  T

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Target: chr7; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 24798520 - 24798588
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||||||||||||||||| ||| |||  ||||||||||||| ||||||||||||    
T  24798520 attaactactatataatttcctttttcatatcctcaacaagt-gcccgggggcaccggttagcatttccc 24798588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 30810724 - 30810675
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccggg 50  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  30810724 attaactactatataatttcctttttcatatccttaaccagtgccccggg 30810675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 47839561 - 47839493
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||| ||| ||||| ||||||||||||    
T  47839561 attaactattatataaattcctttttcatatccttaaccagtacccc-gggacaccggttagcatttccc 47839493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 28262098 - 28262034
Alignment:
Q  3 taactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcattt 67  Q
    ||||||||||||||||||||||||||||||||||||| ||  ||||| ||||||| |||||||||    
T  28262098 taactactatataatttcctttttcatatccttaaccggtgacccggaggcaccggttagcattt 28262034  T

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Target: chr7; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 28587974 - 28587911
Alignment:
Q  5 actactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttcc 69  Q
    ||||||||||||||||||||||||||||||||||||||   |||||||||||| |||||||||||    
T  28587974 actactatataatttcctttttcatatccttaaccagt-gtccgggggcaccggttagcatttcc 28587911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 11686441 - 11686507
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcattt 67  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||  |||||  |||||||||    
T  11686441 attaactactatataatttccttttttatatccttaaccagtatcccggaagcaccagttagcattt 11686507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 1737049 - 1736980
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||| ||||||||||| ||||||||||||||||||||| |||| |  |||||| ||||||||||||    
T  1737049 attaactattatataatttcatttttcatatccttaaccagtgccccagaagcaccggttagcatttccc 1736980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 5729415 - 5729346
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||| ||||||||||||||||||||||||||||||||| | |||||  ||||| ||| ||||||||    
T  5729415 attaactattatataatttcctttttcatatccttaaccagtgctccgggaacaccggttaacatttccc 5729346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 27456230 - 27456298
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||| |||| ||||||||||||||||  ||||||||||||  ||||||||||||    
T  27456230 attaactactatataatttctttttccatatccttaaccagt-gcccgggggcaccagttagcatttccc 27456298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 43594153 - 43594222
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||| ||||||||||||||||| |||||||||||||||   |||||| ||||| ||||||||||||    
T  43594153 attaactattatataatttccttttttatatccttaaccagtgttccggggacaccggttagcatttccc 43594222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 47657049 - 47656981
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttcc 69  Q
    ||||| ||||||||||||| |||||||||||||||||||||| |||| |  |||||| |||||||||||    
T  47657049 attaattactatataattttctttttcatatccttaaccagtgcccccgaagcaccggttagcatttcc 47656981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 13064994 - 13065061
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||| || ||||||||||||||||||||||||||||||| ||  ||| |||||||| ||||||||||||    
T  13064994 attaaatattatataatttcctttttcatatccttaaccaata--ccgtgggcaccggttagcatttccc 13065061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 22973667 - 22973600
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttc 68  Q
    |||||||||||||||||||| ||||| ||||| ||||||||| |||||| |||||   ||||||||||    
T  22973667 attaactactatataatttctttttttatatcattaaccagtgccccggaggcactagttagcatttc 22973600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 47118095 - 47118150
Alignment:
Q  15 aatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||| ||||||||| |||||| ||||||  ||||||||||||    
T  47118095 aatttcctttttcatatctttaaccagtgccccggaggcaccagttagcatttccc 47118150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 4100641 - 4100679
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaacc 39  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  4100641 attaattactatataatttcctttttcatatccttaacc 4100679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 18470056 - 18470126
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagt-accccgggggcaccgattagcatttccc 70  Q
    ||||||| ||||||||||||||||||  ||| ||||||| ||  |||||||||||||| ||||||||||||    
T  18470056 attaactgctatataatttcctttttagtatgcttaaccggtgcccccgggggcaccggttagcatttccc 18470126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 47083124 - 47083086
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaacc 39  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  47083124 attaactactatataatttcttttttcatatccttaacc 47083086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 23357824 - 23357893
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||||||||||| ||||| |||||||||||||||||| ||||| || | || |||| ||| ||||||||    
T  23357824 attaactactatacaattttctttttcatatccttaacgagtactccagaggaaccggttaacatttccc 23357893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 37631659 - 37631728
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||| || ||||||||||||||||| |||||||||||| || ||||||  |||||| ||| ||||||||    
T  37631659 attaattattatataatttccttttttatatccttaacccgtgccccggaagcaccggttaacatttccc 37631728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 6097396 - 6097336
Alignment:
Q  11 atataatttcctttttcat-atccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||||||||| |||| || ||||||||||||| ||||||||||| || ||||||||||||    
T  6097396 atataatttccctttttattatccttaaccagtgccccgggggcatcggttagcatttccc 6097336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 3021960 - 3021915
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccc 46  Q
    |||||||| ||||||||||||||||| |||| ||||||| ||||||    
T  3021960 attaactagtatataatttcctttttaatatgcttaacccgtaccc 3021915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 4087692 - 4087651
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagt 42  Q
    ||||||||||||||||||||||||||  ||| ||||||||||    
T  4087692 attaactactatataatttcctttttagtatgcttaaccagt 4087651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 18117212 - 18117175
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaac 38  Q
    |||||||||||||||||||||| |||||||| ||||||    
T  18117212 attaactactatataatttcctctttcatatacttaac 18117175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 23363284 - 23363321
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaac 38  Q
    ||||||||||||| ||||||||||||| ||||||||||    
T  23363284 attaactactatacaatttcctttttcttatccttaac 23363321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 30924117 - 30924174
Alignment:
Q  11 atataatttcctttttcat-atccttaaccagtaccccgggggcaccgattagcattt 67  Q
    ||||||||||| |||| || |||||||||| || |||||||||||||| |||||||||    
T  30924117 atataatttccctttttattatccttaacccgtgccccgggggcaccggttagcattt 30924174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 36437446 - 36437401
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccc 46  Q
    |||| ||||||||||||| |||||||  ||||||||||||||||||    
T  36437446 attacctactatataattacctttttagtatccttaaccagtaccc 36437401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 32805598 - 32805538
Alignment:
Q  11 atataatttcctttttcat-atccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||||||||| |||| || ||||||||||||| |||||||  ||||| ||||||||||||    
T  32805598 atataatttccctttttattatccttaaccagtgccccgggaacaccggttagcatttccc 32805538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 37674243 - 37674299
Alignment:
Q  14 taatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||| |||||| |||||||||| |||||| || |||||| || ||||||||||||    
T  37674243 taattttcttttttatatccttaatcagtactccaggggcatcggttagcatttccc 37674299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 45045839 - 45045799
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccag 41  Q
    ||||| |||||||||||||| ||||||||| ||||||||||    
T  45045839 attaattactatataatttcatttttcatacccttaaccag 45045799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 6227 - 6295
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttcc 69  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||| ||||||||| |||||||||||    
T  6227 attaactactatatagtttcctttttcatatccttaaccagtgccccaggggcaccggttagcatttcc 6295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 116273 - 116207
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcattt 67  Q
    |||||||||||||||||||||||||||||||| |||||| || |||||||||||||| |||||||||    
T  116273 attaactactatataatttcctttttcatatctttaacctgtgccccgggggcaccggttagcattt 116207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1152 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold1152
Description:

Target: scaffold1152; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 747 - 678
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||||||||||||||| |||||| || | | |||||||||||||||||||||||    
T  747 attaactactatataatttcctttttcatatctttaacccgtgctctgggggcaccgattagcatttccc 678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 50617 - 50548
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||||||||||||||| ||||||||| |||||| ||||||| ||| ||||||||    
T  50617 attaactactatataatttcctttttcatatctttaaccagtgccccggaggcaccggttaacatttccc 50548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 53463 - 53504
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagt 42  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  53463 attaactactatataatttccttttttatatccttaaccagt 53504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 147022 - 147091
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||||||||||||||||||||| || ||||| || |||||| ||||||||||||    
T  147022 attaactactatataatttcctttttcatatccttaactagaaccccaggagcaccggttagcatttccc 147091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 95701 - 95767
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcattt 67  Q
    ||||| || |||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||    
T  95701 attaattattatataatttcctttttcatattcttaaccagtacctcgggggcaccggttagcattt 95767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 14965 - 14896
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||||||||||||||| ||||| ||||| ||||||||| |||||||| ||||| ||||||||||||    
T  14965 attaactactatataatttctttttttatatctttaaccagtgccccggggacaccggttagcatttccc 14896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 8014 - 8064
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggg 51  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  8014 attaactactatataatttcctttttcatatccttaaccagtgcccggggg 8064  T

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Target: scaffold0549 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 7357 - 7307
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggg 51  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  7357 attaactactatataatttcctttttcatatccttaaccagtgcccggggg 7307  T

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Target: scaffold0206 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 11087 - 11154
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||| |||||||||||||||||||||||||||||||||  ||  ||||||||  ||||||||||||    
T  11087 attaactaatatataatttcctttttcatatccttaaccagtgtcc--ggggcaccagttagcatttccc 11154  T

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Target: scaffold0524 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0524
Description:

Target: scaffold0524; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 894 - 825
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||||||||||||||||| |||||||||||||||||| ||| | ||||  ||||||  |||||||||||    
T  894 attaactactatataattttctttttcatatccttaactagtgctccggaagcaccggctagcatttccc 825  T

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Target: scaffold1266 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1266
Description:

Target: scaffold1266; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 361 - 293
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    |||||||| |||||||||| ||||||||||| ||||||||||  ||| ||||||||| |||| |||||||    
T  361 attaactattatataattttctttttcatatgcttaaccagt-gccctggggcaccggttaggatttccc 293  T

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Target: scaffold0050 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 69295 - 69258
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaac 38  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  69295 attaactactatataatttactttttcatatccttaac 69258  T

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Target: scaffold0038 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 25787 - 25719
Alignment:
Q  1 attaactactatataatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||| |||||||||||| |||||||||||||||||||| ||| ||| | ||||||  ||||||||||||    
T  25787 attaattactatataatt-cctttttcatatccttaacccgtatcccagaggcaccagttagcatttccc 25719  T

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Target: scaffold0007 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 233920 - 233864
Alignment:
Q  14 taatttcctttttcatatccttaaccagtaccccgggggcaccgattagcatttccc 70  Q
    ||||||||||||||||||| ||||||| |  ||||| | |||||||| |||||||||    
T  233920 taatttcctttttcatatctttaaccaatgtcccggagacaccgattcgcatttccc 233864  T

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