View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17426_low_10 (Length: 226)
Name: NF17426_low_10
Description: NF17426
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17426_low_10 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 17 - 226
Target Start/End: Original strand, 37666595 - 37666804
Alignment:
| Q |
17 |
gtattaaattatcaatattaattaattaatgatatttgtgttttaattactagtatagttttaggtgtcctatgtggttaatgcgacgtttgcgtcagca |
116 |
Q |
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| T |
37666595 |
gtattaaattatcaatattaattaattaatgatatttgtgttttaattactagtatagttttaggtgtcctatgtggttaatccgacgtttgcgtcagca |
37666694 |
T |
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| Q |
117 |
ttgattgtatacaagtttgatgatagtacgtagtacatttgtacaaagtttgttatagacctgaattcctatgttatgctagctgcatctatattttcag |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37666695 |
ttgattgtatacaagtttgatgatagtacgtagtacatttgtacaaagtttgttatagacctgaattcctatgttatgctagctgcatctatattttcag |
37666794 |
T |
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| Q |
217 |
aaaccttcat |
226 |
Q |
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| T |
37666795 |
aaaccttcat |
37666804 |
T |
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