View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17428_high_9 (Length: 341)
Name: NF17428_high_9
Description: NF17428
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17428_high_9 |
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Alignment Details
Target: chr7 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 21 - 318
Target Start/End: Complemental strand, 49008175 - 49007878
Alignment:
| Q |
21 |
cctcttgagctataactatccacacttggtgctggttttgtacctaaaacagttttattaaattgcatgcttgcttttggattagtattgcacttaatga |
120 |
Q |
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| T |
49008175 |
cctcttgagctataactatccacacttggtgctggttttgtacctaaaacagttttattaaattgcatgcttgcttttggattagtattgcacttaatga |
49008076 |
T |
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| Q |
121 |
aatccttgataagttctccattaattggattcnnnnnnntagatggaaacttagtttgaatgtaatatgttatatcctcagaactatttgatatgaaaac |
220 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
49008075 |
aatccttgataagttctccattaattggattcaaaaaaatagatggaaacttagtttgaatgtaatatgttatatcctcagaactatttgatatgaaaac |
49007976 |
T |
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| Q |
221 |
acccgcaacagcttttattctgtccaagttatccacttgagtagcaagtgttcggttcttgtcttcacacaccacgatcttgtttcttgccctgatga |
318 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
49007975 |
acccgcaacaacttttattctgtccaagttatccacttgagtagcaagtgttcggttcttgtcttcacacaccacgatcttgtttcttgctctgatga |
49007878 |
T |
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