View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17429_high_1 (Length: 309)
Name: NF17429_high_1
Description: NF17429
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17429_high_1 |
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Alignment Details
Target: chr7 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 19 - 293
Target Start/End: Original strand, 45615899 - 45616177
Alignment:
| Q |
19 |
ctctttatttatgccgctctggaatttgaactaatagaa--gattataaaccataagtagggtccatctaagaatatagctaggttcaaagtaggatacc |
116 |
Q |
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| T |
45615899 |
ctctttatttatgccgctctggaatttggactaatagcacagattataagccataagtagggtccatctaagaatatagctaggttcaaagtaggatacc |
45615998 |
T |
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| Q |
117 |
cgcttgcccttttagaaatagaattttggaaaagaaatcatta-agaaaatgggtggttaggacatcagtcaaaaataaaata-ttaaatcatagactaa |
214 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||| | |||||||||||||||| ||| |||||||||||||||| |
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| T |
45615999 |
agcttgcccttttagaaatagaatttttgaaaagaaatcattagagaaaatggttggttaagtcatcagtcaaaaataagatacttaaatcatagactaa |
45616098 |
T |
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| Q |
215 |
acaataagagtaattagtaggcactaaaactttatactaaatataaaataaaagaacaaattaatctaaaagttgattg |
293 |
Q |
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||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||| |
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| T |
45616099 |
acattaagagtaattagtaggcactaaaactttatgctaaaaataaaataaaagaacaaattaaactaaaagttgattg |
45616177 |
T |
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