View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17431_high_14 (Length: 242)

Name: NF17431_high_14
Description: NF17431
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17431_high_14
NF17431_high_14
[»] chr1 (28 HSPs)
chr1 (110-242)||(44821943-44822075)
chr1 (137-242)||(13880460-13880565)
chr1 (134-242)||(18824637-18824745)
chr1 (110-164)||(22350714-22350768)
chr1 (110-165)||(21708147-21708202)
chr1 (110-165)||(21712690-21712745)
chr1 (144-217)||(16401943-16402017)
chr1 (110-164)||(51476991-51477045)
chr1 (146-216)||(25091366-25091436)
chr1 (133-211)||(35064558-35064636)
chr1 (110-166)||(46560076-46560132)
chr1 (136-211)||(20058508-20058583)
chr1 (114-164)||(21995664-21995714)
chr1 (110-164)||(22050350-22050404)
chr1 (111-165)||(43543492-43543546)
chr1 (110-163)||(22122168-22122221)
chr1 (110-163)||(40129679-40129732)
chr1 (110-163)||(41230941-41230994)
chr1 (110-164)||(7320594-7320648)
chr1 (110-164)||(9044518-9044572)
chr1 (110-164)||(29299029-29299083)
chr1 (134-211)||(52984244-52984321)
chr1 (110-166)||(14237653-14237709)
chr1 (117-165)||(42314750-42314798)
chr1 (110-166)||(51083172-51083228)
chr1 (110-165)||(16274572-16274627)
chr1 (110-154)||(22122344-22122388)
chr1 (112-164)||(39061320-39061372)
[»] scaffold0180 (1 HSPs)
scaffold0180 (110-242)||(28251-28383)
[»] chr6 (36 HSPs)
chr6 (137-242)||(14978465-14978570)
chr6 (137-242)||(25618822-25618927)
chr6 (134-242)||(18659454-18659562)
chr6 (133-242)||(611822-611931)
chr6 (134-242)||(13750201-13750309)
chr6 (113-164)||(22375800-22375851)
chr6 (110-166)||(19401092-19401148)
chr6 (110-164)||(18259174-18259227)
chr6 (114-164)||(28103448-28103498)
chr6 (110-165)||(17027863-17027918)
chr6 (110-165)||(25536003-25536058)
chr6 (110-165)||(25689421-25689476)
chr6 (110-165)||(25721093-25721148)
chr6 (110-165)||(25753436-25753491)
chr6 (110-165)||(25755606-25755661)
chr6 (110-165)||(34963968-34964023)
chr6 (114-164)||(20733244-20733294)
chr6 (110-164)||(22783122-22783176)
chr6 (114-164)||(27852208-27852258)
chr6 (110-163)||(1599029-1599082)
chr6 (110-165)||(19005936-19005991)
chr6 (110-165)||(23993017-23993072)
chr6 (110-164)||(8055924-8055978)
chr6 (110-164)||(16198393-16198447)
chr6 (110-164)||(17882710-17882764)
chr6 (110-164)||(31629861-31629915)
chr6 (127-164)||(16246233-16246270)
chr6 (134-203)||(24441677-24441746)
chr6 (112-164)||(18459306-18459358)
chr6 (110-165)||(18914913-18914967)
chr6 (110-165)||(19003475-19003530)
chr6 (110-165)||(30676038-30676093)
chr6 (131-164)||(23501691-23501724)
chr6 (131-163)||(15704565-15704597)
chr6 (131-163)||(19772667-19772699)
chr6 (131-163)||(22806758-22806790)
[»] chr3 (28 HSPs)
chr3 (137-242)||(16644985-16645090)
chr3 (134-242)||(14819102-14819210)
chr3 (152-242)||(3393677-3393767)
chr3 (113-203)||(6804853-6804943)
chr3 (134-218)||(52337902-52337986)
chr3 (113-164)||(46752107-46752158)
chr3 (133-211)||(43929412-43929490)
chr3 (114-164)||(52988858-52988908)
chr3 (110-166)||(49968857-49968913)
chr3 (110-165)||(10379927-10379982)
chr3 (110-165)||(20629511-20629566)
chr3 (110-165)||(24514271-24514326)
chr3 (110-165)||(55318623-55318678)
chr3 (110-164)||(12119185-12119239)
chr3 (111-165)||(46823050-46823104)
chr3 (110-163)||(13937295-13937348)
chr3 (115-164)||(14967187-14967236)
chr3 (110-163)||(17444084-17444137)
chr3 (110-163)||(41124727-41124780)
chr3 (110-163)||(8899611-8899664)
chr3 (110-163)||(13938301-13938354)
chr3 (110-163)||(16282079-16282132)
chr3 (110-163)||(38961158-38961211)
chr3 (112-164)||(50350816-50350868)
chr3 (117-160)||(40957234-40957277)
chr3 (110-153)||(45530613-45530656)
chr3 (131-163)||(18699431-18699463)
chr3 (131-163)||(22758835-22758867)
[»] scaffold0364 (1 HSPs)
scaffold0364 (144-242)||(8195-8293)
[»] chr4 (35 HSPs)
chr4 (134-242)||(10705751-10705859)
chr4 (134-242)||(10919521-10919629)
chr4 (152-232)||(8711571-8711651)
chr4 (133-242)||(29856711-29856823)
chr4 (134-214)||(14931077-14931157)
chr4 (134-242)||(3338385-3338502)
chr4 (152-217)||(6512660-6512725)
chr4 (111-164)||(27996790-27996843)
chr4 (114-164)||(10057663-10057713)
chr4 (182-242)||(8711653-8711713)
chr4 (110-165)||(19617394-19617449)
chr4 (110-164)||(363161-363215)
chr4 (114-164)||(19739740-19739790)
chr4 (112-165)||(19858403-19858456)
chr4 (113-165)||(14745699-14745751)
chr4 (113-164)||(26014285-26014336)
chr4 (110-165)||(52872401-52872456)
chr4 (110-164)||(1836734-1836788)
chr4 (110-164)||(3515795-3515849)
chr4 (152-229)||(3863225-3863303)
chr4 (152-229)||(3871982-3872060)
chr4 (110-164)||(7640400-7640454)
chr4 (110-159)||(11773-11822)
chr4 (112-165)||(12778195-12778248)
chr4 (110-163)||(52313542-52313595)
chr4 (115-166)||(13591067-13591118)
chr4 (110-165)||(14970026-14970081)
chr4 (109-164)||(15354846-15354901)
chr4 (110-165)||(15489468-15489523)
chr4 (110-164)||(18214524-18214578)
chr4 (110-164)||(44616185-44616239)
chr4 (110-166)||(3485863-3485919)
chr4 (112-164)||(13165132-13165184)
chr4 (112-164)||(14477631-14477683)
chr4 (112-164)||(18463023-18463075)
[»] chr7 (42 HSPs)
chr7 (134-240)||(40554442-40554548)
chr7 (18-94)||(45695965-45696041)
chr7 (110-242)||(23461546-23461687)
chr7 (133-213)||(4326118-4326198)
chr7 (114-165)||(11085522-11085573)
chr7 (111-164)||(15203177-15203230)
chr7 (110-165)||(8469330-8469385)
chr7 (110-164)||(15095637-15095691)
chr7 (113-165)||(14980669-14980721)
chr7 (113-165)||(15410145-15410197)
chr7 (110-165)||(8941262-8941317)
chr7 (114-165)||(11091648-11091699)
chr7 (110-165)||(14269083-14269138)
chr7 (113-164)||(15624019-15624070)
chr7 (110-164)||(5294432-5294486)
chr7 (110-164)||(5295605-5295659)
chr7 (110-164)||(5296778-5296832)
chr7 (110-164)||(11054711-11054765)
chr7 (110-164)||(11392516-11392570)
chr7 (133-211)||(44190168-44190246)
chr7 (110-163)||(11973143-11973196)
chr7 (109-164)||(10500735-10500790)
chr7 (109-164)||(14156392-14156447)
chr7 (113-164)||(30820151-30820202)
chr7 (113-164)||(36685146-36685197)
chr7 (110-164)||(9945010-9945064)
chr7 (110-164)||(14317516-14317570)
chr7 (110-164)||(15140211-15140265)
chr7 (110-164)||(26355194-26355248)
chr7 (110-164)||(26357646-26357700)
chr7 (114-164)||(46579759-46579809)
chr7 (110-163)||(21188926-21188979)
chr7 (113-164)||(8135238-8135289)
chr7 (115-166)||(9724800-9724851)
chr7 (110-165)||(45846764-45846819)
chr7 (110-164)||(16214472-16214526)
chr7 (113-164)||(10658851-10658903)
chr7 (113-164)||(12754612-12754664)
chr7 (131-163)||(14259413-14259445)
chr7 (131-163)||(14928290-14928322)
chr7 (131-163)||(15351756-15351788)
chr7 (131-163)||(32302246-32302278)
[»] scaffold0273 (1 HSPs)
scaffold0273 (134-242)||(7697-7805)
[»] scaffold0106 (1 HSPs)
scaffold0106 (133-242)||(22006-22115)
[»] chr2 (36 HSPs)
chr2 (133-234)||(43706983-43707084)
chr2 (152-217)||(22704017-22704082)
chr2 (110-164)||(19358889-19358943)
chr2 (113-164)||(24792759-24792810)
chr2 (110-164)||(18388190-18388244)
chr2 (152-218)||(23149641-23149707)
chr2 (152-218)||(23561431-23561497)
chr2 (114-164)||(34858192-34858242)
chr2 (114-164)||(34873254-34873304)
chr2 (110-165)||(23706345-23706400)
chr2 (110-165)||(23932248-23932303)
chr2 (113-164)||(24834023-24834074)
chr2 (114-165)||(27473458-27473509)
chr2 (110-165)||(32214249-32214304)
chr2 (110-164)||(22106253-22106307)
chr2 (110-164)||(24918928-24918982)
chr2 (110-163)||(6726835-6726888)
chr2 (110-163)||(24368615-24368668)
chr2 (110-162)||(24897411-24897463)
chr2 (110-162)||(24899894-24899946)
chr2 (110-162)||(24902371-24902423)
chr2 (110-162)||(24904848-24904900)
chr2 (110-162)||(24907323-24907375)
chr2 (114-165)||(20916309-20916360)
chr2 (110-165)||(24528866-24528921)
chr2 (110-165)||(24682224-24682279)
chr2 (113-163)||(25616578-25616628)
chr2 (110-164)||(45027220-45027274)
chr2 (110-163)||(21154136-21154189)
chr2 (110-163)||(24671813-24671866)
chr2 (110-165)||(38968371-38968426)
chr2 (110-164)||(44072555-44072609)
chr2 (112-164)||(12626427-12626479)
chr2 (108-164)||(22695227-22695283)
chr2 (112-168)||(25584259-25584315)
chr2 (112-164)||(28652552-28652604)
[»] scaffold0234 (1 HSPs)
scaffold0234 (134-235)||(25911-26012)
[»] scaffold0004 (1 HSPs)
scaffold0004 (152-233)||(204281-204362)
[»] chr8 (30 HSPs)
chr8 (110-203)||(20457990-20458083)
chr8 (134-218)||(32950921-32951005)
chr8 (110-167)||(20463193-20463250)
chr8 (110-164)||(13660854-13660908)
chr8 (110-164)||(13719497-13719551)
chr8 (114-166)||(19807392-19807444)
chr8 (110-163)||(42265510-42265563)
chr8 (110-164)||(3273888-3273942)
chr8 (110-164)||(22317911-22317965)
chr8 (113-166)||(37516608-37516661)
chr8 (110-165)||(1326444-1326499)
chr8 (110-165)||(16412634-16412689)
chr8 (110-164)||(19897302-19897356)
chr8 (152-229)||(19989948-19990026)
chr8 (110-164)||(24049398-24049452)
chr8 (110-164)||(32810482-32810536)
chr8 (111-164)||(5852507-5852560)
chr8 (110-165)||(11361305-11361360)
chr8 (110-165)||(38549132-38549187)
chr8 (110-164)||(15202306-15202360)
chr8 (110-164)||(20457466-20457520)
chr8 (114-164)||(22237050-22237100)
chr8 (110-164)||(24485254-24485308)
chr8 (110-164)||(27471737-27471791)
chr8 (110-164)||(32122516-32122570)
chr8 (110-163)||(20404067-20404120)
chr8 (152-203)||(17272598-17272649)
chr8 (110-165)||(45289760-45289815)
chr8 (110-164)||(37609722-37609776)
chr8 (134-211)||(22919924-22920001)
[»] scaffold0107 (1 HSPs)
scaffold0107 (134-218)||(3909-3993)
[»] scaffold0026 (2 HSPs)
scaffold0026 (115-203)||(10103-10191)
scaffold0026 (113-203)||(22177-22267)
[»] chr5 (18 HSPs)
chr5 (134-217)||(10817834-10817917)
chr5 (134-217)||(22777017-22777100)
chr5 (110-164)||(21405628-21405682)
chr5 (110-164)||(21914492-21914546)
chr5 (110-164)||(10774664-10774718)
chr5 (110-160)||(17876201-17876251)
chr5 (110-165)||(2153951-2154006)
chr5 (110-165)||(17516289-17516344)
chr5 (110-165)||(29330761-29330816)
chr5 (134-203)||(8952002-8952071)
chr5 (110-163)||(20917168-20917221)
chr5 (113-165)||(20901325-20901377)
chr5 (113-164)||(21554303-21554354)
chr5 (110-165)||(24473862-24473917)
chr5 (114-161)||(26832623-26832670)
chr5 (113-164)||(21556949-21557000)
chr5 (110-163)||(32028813-32028866)
chr5 (112-168)||(21398792-21398848)
[»] scaffold0007 (1 HSPs)
scaffold0007 (110-164)||(158822-158876)
[»] scaffold0331 (1 HSPs)
scaffold0331 (113-164)||(12115-12166)
[»] scaffold0032 (1 HSPs)
scaffold0032 (114-165)||(68299-68350)
[»] scaffold0151 (2 HSPs)
scaffold0151 (110-164)||(31106-31160)
scaffold0151 (110-165)||(36598-36653)
[»] scaffold0001 (2 HSPs)
scaffold0001 (111-164)||(499057-499110)
scaffold0001 (110-164)||(501852-501906)
[»] scaffold0338 (1 HSPs)
scaffold0338 (113-164)||(10762-10813)
[»] scaffold0065 (1 HSPs)
scaffold0065 (113-164)||(55942-55993)
[»] scaffold0956 (1 HSPs)
scaffold0956 (133-211)||(2047-2125)
[»] scaffold0819 (1 HSPs)
scaffold0819 (110-164)||(5364-5418)
[»] scaffold0175 (1 HSPs)
scaffold0175 (110-164)||(8640-8694)
[»] scaffold0153 (2 HSPs)
scaffold0153 (114-164)||(5299-5349)
scaffold0153 (114-164)||(12319-12369)
[»] scaffold0116 (1 HSPs)
scaffold0116 (110-164)||(35464-35518)
[»] scaffold0074 (1 HSPs)
scaffold0074 (114-164)||(1940-1990)
[»] scaffold0035 (3 HSPs)
scaffold0035 (157-242)||(59633-59727)
scaffold0035 (110-164)||(107263-107317)
scaffold0035 (110-164)||(115764-115818)
[»] scaffold0429 (1 HSPs)
scaffold0429 (134-242)||(1913-2030)
[»] scaffold0028 (6 HSPs)
scaffold0028 (110-163)||(3053-3106)
scaffold0028 (110-164)||(135107-135161)
scaffold0028 (110-164)||(137576-137630)
scaffold0028 (110-164)||(140045-140099)
scaffold0028 (110-164)||(142514-142568)
scaffold0028 (110-164)||(144983-145037)
[»] scaffold0394 (1 HSPs)
scaffold0394 (112-164)||(7514-7566)
[»] scaffold1792 (1 HSPs)
scaffold1792 (110-165)||(1146-1201)
[»] scaffold0711 (1 HSPs)
scaffold0711 (110-165)||(6896-6951)
[»] scaffold0577 (1 HSPs)
scaffold0577 (113-164)||(9060-9111)
[»] scaffold0322 (1 HSPs)
scaffold0322 (110-165)||(18725-18780)
[»] scaffold0230 (2 HSPs)
scaffold0230 (110-165)||(22699-22754)
scaffold0230 (110-161)||(20527-20578)
[»] scaffold0191 (1 HSPs)
scaffold0191 (110-165)||(3608-3663)
[»] scaffold0149 (1 HSPs)
scaffold0149 (110-165)||(34284-34339)
[»] scaffold0040 (2 HSPs)
scaffold0040 (110-165)||(20632-20687)
scaffold0040 (110-154)||(43526-43570)
[»] scaffold0574 (1 HSPs)
scaffold0574 (110-164)||(7239-7293)
[»] scaffold0379 (2 HSPs)
scaffold0379 (110-164)||(3893-3947)
scaffold0379 (110-164)||(13887-13941)
[»] scaffold0297 (1 HSPs)
scaffold0297 (110-164)||(2918-2972)
[»] scaffold0008 (1 HSPs)
scaffold0008 (110-164)||(135504-135558)
[»] scaffold0780 (1 HSPs)
scaffold0780 (113-166)||(2469-2522)
[»] scaffold0016 (3 HSPs)
scaffold0016 (110-163)||(185057-185110)
scaffold0016 (113-165)||(118754-118806)
scaffold0016 (133-211)||(174060-174138)
[»] scaffold0747 (1 HSPs)
scaffold0747 (110-165)||(1496-1551)
[»] scaffold0716 (1 HSPs)
scaffold0716 (110-165)||(5482-5537)
[»] scaffold0494 (1 HSPs)
scaffold0494 (110-165)||(35-90)
[»] scaffold0319 (1 HSPs)
scaffold0319 (110-165)||(6109-6164)
[»] scaffold0306 (1 HSPs)
scaffold0306 (110-165)||(10659-10714)
[»] scaffold0174 (1 HSPs)
scaffold0174 (114-161)||(13639-13686)
[»] scaffold0165 (2 HSPs)
scaffold0165 (112-167)||(32048-32103)
scaffold0165 (112-164)||(31929-31981)
[»] scaffold0043 (3 HSPs)
scaffold0043 (110-165)||(10772-10827)
scaffold0043 (131-166)||(27996-28031)
scaffold0043 (131-166)||(42854-42889)
[»] scaffold0562 (1 HSPs)
scaffold0562 (152-229)||(2802-2880)
[»] scaffold0308 (1 HSPs)
scaffold0308 (110-164)||(13438-13492)
[»] scaffold0251 (1 HSPs)
scaffold0251 (110-164)||(20086-20140)
[»] scaffold0053 (1 HSPs)
scaffold0053 (109-163)||(60723-60777)
[»] scaffold0031 (1 HSPs)
scaffold0031 (110-164)||(56220-56274)
[»] scaffold0411 (1 HSPs)
scaffold0411 (131-164)||(13417-13450)
[»] scaffold0042 (1 HSPs)
scaffold0042 (114-163)||(43169-43218)
[»] scaffold0848 (1 HSPs)
scaffold0848 (110-166)||(2019-2075)
[»] scaffold1296 (1 HSPs)
scaffold1296 (110-165)||(2042-2097)
[»] scaffold0535 (1 HSPs)
scaffold0535 (110-165)||(7572-7627)
[»] scaffold0529 (1 HSPs)
scaffold0529 (113-164)||(4166-4217)
[»] scaffold0317 (1 HSPs)
scaffold0317 (110-165)||(6256-6311)
[»] scaffold0037 (1 HSPs)
scaffold0037 (110-165)||(81565-81620)
[»] scaffold0023 (1 HSPs)
scaffold0023 (110-165)||(16759-16814)
[»] scaffold0019 (2 HSPs)
scaffold0019 (110-165)||(21960-22015)
scaffold0019 (135-163)||(30094-30122)
[»] scaffold0278 (1 HSPs)
scaffold0278 (110-164)||(8720-8774)
[»] scaffold0117 (1 HSPs)
scaffold0117 (153-211)||(26072-26130)
[»] scaffold0146 (1 HSPs)
scaffold0146 (110-166)||(22983-23040)
[»] scaffold1939 (1 HSPs)
scaffold1939 (112-164)||(127-179)
[»] scaffold0546 (1 HSPs)
scaffold0546 (110-166)||(7931-7987)
[»] scaffold0337 (1 HSPs)
scaffold0337 (112-164)||(3204-3256)
[»] scaffold0292 (1 HSPs)
scaffold0292 (131-163)||(7574-7606)
[»] scaffold0205 (1 HSPs)
scaffold0205 (131-163)||(30673-30705)
[»] scaffold0125 (1 HSPs)
scaffold0125 (112-164)||(28551-28603)
[»] scaffold0109 (1 HSPs)
scaffold0109 (110-166)||(5320-5376)
[»] scaffold0092 (1 HSPs)
scaffold0092 (112-164)||(38442-38494)
[»] scaffold0058 (1 HSPs)
scaffold0058 (112-164)||(59656-59708)
[»] scaffold0034 (1 HSPs)
scaffold0034 (131-163)||(120973-121005)
[»] scaffold0018 (1 HSPs)
scaffold0018 (131-163)||(21714-21746)


Alignment Details
Target: chr1 (Bit Score: 109; Significance: 6e-55; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 110 - 242
Target Start/End: Complemental strand, 44822075 - 44821943
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaattctgacgaacgaagttctacgatctctccggttcttcacttgg 209  Q
    |||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  44822075 aattttcataatcatataatcagaattattgaaggttagtcccactcttaccttaattatgacgaacgaagctctacgatctctccggttcttcacttgg 44821976  T
Q  210 ctcttctctctttttctcccccaaaggcttgtt 242  Q
    |||||||| ||||||||||||||||||||||||    
T  44821975 ctcttctccctttttctcccccaaaggcttgtt 44821943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 137 - 242
Target Start/End: Complemental strand, 13880565 - 13880460
Alignment:
Q  137 attgaaggttagtcccacccttaccttaattctgacgaacgaagttctacgatctctccggttcttcacttggctcttctctctttttctcccccaaagg 236  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  13880565 attgaatgttagtcccacccttaccttaattctgacgaacgaagctctacgatctctccggttcttcacttggctcttctccctttttctcccccaaagg 13880466  T
Q  237 cttgtt 242  Q
    ||||||    
T  13880465 cttgtt 13880460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 134 - 242
Target Start/End: Original strand, 18824637 - 18824745
Alignment:
Q  134 attattgaaggttagtcccacccttaccttaattctgacgaacgaagttctacgatctctccggttcttcacttggctcttctctctttttctcccccaa 233  Q
    ||||||||  ||||| | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  18824637 attattgagagttagcctcacccttaccttaattctgacgaacgaagctctacgatctctccggttcttcacttggctcttctccctttttctcccccaa 18824736  T
Q  234 aggcttgtt 242  Q
    |||||||||    
T  18824737 aggcttgtt 18824745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 110 - 164
Target Start/End: Original strand, 22350714 - 22350768
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22350714 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 22350768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 21708147 - 21708202
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  21708147 aattttcagaattacatactcagaattattgaaggttagtcccacccttaccttaa 21708202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 21712690 - 21712745
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  21712690 aattttcagaattacatactcagaattattgaaggttagtcccacccttaccttaa 21712745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 144 - 217
Target Start/End: Original strand, 16401943 - 16402017
Alignment:
Q  144 gttagtcccacccttaccttaa-ttctgacgaacgaagttctacgatctctccggttcttcacttggctcttctc 217  Q
    |||||||||||||||||||||| ||| ||||||| | ||||||| ||||||||||| ||||||||||||||||||    
T  16401943 gttagtcccacccttaccttaaattcagacgaacaacgttctacaatctctccggtccttcacttggctcttctc 16402017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 110 - 164
Target Start/End: Original strand, 51476991 - 51477045
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  51476991 aattttcagaatcatatactcaaaattattaaaggttagtcccacccttacctta 51477045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 146 - 216
Target Start/End: Complemental strand, 25091436 - 25091366
Alignment:
Q  146 tagtcccacccttaccttaattctgacgaacgaagttctacgatctctccggttcttcacttggctcttct 216  Q
    ||||| ||||||||||||||||| ||||||| | ||||||| ||||||||||| |||| ||||||||||||    
T  25091436 tagtctcacccttaccttaattcagacgaacaacgttctacaatctctccggtccttctcttggctcttct 25091366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 133 - 211
Target Start/End: Original strand, 35064558 - 35064636
Alignment:
Q  133 aattattgaaggttagtcccacccttaccttaattctgacgaacgaagttctacgatctctccggttcttcacttggct 211  Q
    |||||||||| || || | ||||||||||||||||  || |||| ||| ||||||||||||||||||||||||||||||    
T  35064558 aattattgaaagtcagcctcacccttaccttaatttagatgaacaaagctctacgatctctccggttcttcacttggct 35064636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 110 - 166
Target Start/End: Original strand, 46560076 - 46560132
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaat 166  Q
    |||||||||||||||| |||||  ||||||||| |||||||||||||||||||||||    
T  46560076 aattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttaat 46560132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 211
Target Start/End: Original strand, 20058508 - 20058583
Alignment:
Q  136 tattgaaggttagtcccacccttaccttaattctgacgaacgaagttctacgatctctccggttcttcacttggct 211  Q
    ||||||||||||| | ||||||||||||||||  || |||| ||| ||||| |||||||||||||||||| |||||    
T  20058508 tattgaaggttagcctcacccttaccttaatttagatgaacaaagctctacaatctctccggttcttcacctggct 20058583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 114 - 164
Target Start/End: Complemental strand, 21995714 - 21995664
Alignment:
Q  114 ttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||| ||||    
T  21995714 ttcagaatcacatactcaaaattattgaaggttagtcccacccttatctta 21995664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 164
Target Start/End: Complemental strand, 22050404 - 22050350
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||||||||| |||||  ||||||||| |||||||||||||||||||||    
T  22050404 aattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 22050350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 43543492 - 43543546
Alignment:
Q  111 attttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    ||||||||||||||| |||||  ||||||||| ||||||||||||||||||||||    
T  43543492 attttcagaatcatagactcaagattattgaatgttagtcccacccttaccttaa 43543546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 163
Target Start/End: Complemental strand, 22122221 - 22122168
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctt 163  Q
    |||||||||||||||| |||||  ||||||||| ||||||||||||||||||||    
T  22122221 aattttcagaatcatagactcaagattattgaatgttagtcccacccttacctt 22122168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 163
Target Start/End: Original strand, 40129679 - 40129732
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctt 163  Q
    |||||||||||||||| ||||| |||||||||| ||||||| ||||||||||||    
T  40129679 aattttcagaatcatagactcaaaattattgaatgttagtctcacccttacctt 40129732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 163
Target Start/End: Complemental strand, 41230994 - 41230941
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctt 163  Q
    |||||||||||||||| |||||  ||||||||| ||||||||||||||||||||    
T  41230994 aattttcagaatcatagactcaagattattgaatgttagtcccacccttacctt 41230941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 164
Target Start/End: Complemental strand, 7320648 - 7320594
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||||| ||| ||| ||||||| || |||||||||||||||||||||||    
T  7320648 aattttcagaataatacacttagaattagtgtaggttagtcccacccttacctta 7320594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 164
Target Start/End: Complemental strand, 9044572 - 9044518
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||||||||| |||||  ||||||||| ||||||| |||||||||||||    
T  9044572 aattttcagaatcatagactcaagattattgaatgttagtctcacccttacctta 9044518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 164
Target Start/End: Original strand, 29299029 - 29299083
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||||||||| | |||  ||||||||| |||||||||||||||||||||    
T  29299029 aattttcagaatcatagattcaagattattgaatgttagtcccacccttacctta 29299083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 211
Target Start/End: Original strand, 52984244 - 52984321
Alignment:
Q  134 attattgaaggttagtcccacccttaccttaattctgacgaacgaagttctacgatctctccggttcttcacttggct 211  Q
    ||||||||  ||||| | |||| |||||||||||  || |||| ||| ||||| ||||||||||||||||||||||||    
T  52984244 attattgagagttagcctcaccattaccttaatttagatgaacaaagctctacaatctctccggttcttcacttggct 52984321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 166
Target Start/End: Complemental strand, 14237709 - 14237653
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaat 166  Q
    |||||||||||||||| ||| |  |||||||||  ||||||||||||||||||||||    
T  14237709 aattttcagaatcatagacttaagattattgaatattagtcccacccttaccttaat 14237653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 165
Target Start/End: Complemental strand, 42314798 - 42314750
Alignment:
Q  117 agaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    ||||||||| |||||  ||||||||| ||||||||||||||||||||||    
T  42314798 agaatcatagactcaagattattgaatgttagtcccacccttaccttaa 42314750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 166
Target Start/End: Original strand, 51083172 - 51083228
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaat 166  Q
    |||||||| ||||||| ||| |  ||||||||| |||||||||||||||||||||||    
T  51083172 aattttcaaaatcatagacttaagattattgaatgttagtcccacccttaccttaat 51083228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 165
Target Start/End: Complemental strand, 16274627 - 16274572
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||||||| ||||||| |||||  ||||||||| ||||||| ||||||||||||||    
T  16274627 aattttcaaaatcatagactcaagattattgaatgttagtctcacccttaccttaa 16274572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 22122388 - 22122344
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccac 154  Q
    |||||||||||||||| |||||  ||||||||| |||||||||||    
T  22122388 aattttcagaatcatagactcaagattattgaatgttagtcccac 22122344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 164
Target Start/End: Original strand, 39061320 - 39061372
Alignment:
Q  112 ttttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||| |||||||||  ||||  ||||||||||||||| |||||||||    
T  39061320 ttttcagaattatatactcatgattacagaaggttagtcccactcttacctta 39061372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 110 - 242
Target Start/End: Complemental strand, 28383 - 28251
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaattctgacgaacgaagttctacgatctctccggttcttcacttgg 209  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||   | |||||||| ||||||||||||||||||||||||||||    
T  28383 aattttcagaatcatatactcagaattattgaagggtagtcccacccttaccttaatttaaatgaacgaagctctacgatctctccggttcttcacttgg 28284  T
Q  210 ctcttctctctttttctcccccaaaggcttgtt 242  Q
    |||||||| |||||||||||||||||| |||||    
T  28283 ctcttctccctttttctcccccaaaggtttgtt 28251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 94; Significance: 5e-46; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 137 - 242
Target Start/End: Complemental strand, 14978570 - 14978465
Alignment:
Q  137 attgaaggttagtcccacccttaccttaattctgacgaacgaagttctacgatctctccggttcttcacttggctcttctctctttttctcccccaaagg 236  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  14978570 attgaatgttagtcccacccttaccttaattctgacgaacgaagctctacgatctctccggttcttcacttggctcttctccctttttctcccccaaagg 14978471  T
Q  237 cttgtt 242  Q
    ||||||    
T  14978470 cttgtt 14978465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 137 - 242
Target Start/End: Complemental strand, 25618927 - 25618822
Alignment:
Q  137 attgaaggttagtcccacccttaccttaattctgacgaacgaagttctacgatctctccggttcttcacttggctcttctctctttttctcccccaaagg 236  Q
    |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  25618927 attgaatgttagtcccacccttaccttaattctgacgaacgaagctctacgatctctccggttcttcacttgactcttctccctttttctcccccaaagg 25618828  T
Q  237 cttgtt 242  Q
    ||||||    
T  25618827 cttgtt 25618822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 134 - 242
Target Start/End: Original strand, 18659454 - 18659562
Alignment:
Q  134 attattgaaggttagtcccacccttaccttaattctgacgaacgaagttctacgatctctccggttcttcacttggctcttctctctttttctcccccaa 233  Q
    ||||||||  ||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  18659454 attattgagagttagtctcacccttaccttaattctgacgaacgaagctctacaatctctccggttcttcacttggctcttctccctttttctcccccaa 18659553  T
Q  234 aggcttgtt 242  Q
    |||||||||    
T  18659554 aggcttgtt 18659562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 133 - 242
Target Start/End: Original strand, 611822 - 611931
Alignment:
Q  133 aattattgaaggttagtcccacccttaccttaattctgacgaacgaagttctacgatctctccggttcttcacttggctcttctctctttttctccccca 232  Q
    |||||||||| ||| | | |||||||||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  611822 aattattgaaagtttgcctcacccttaccttaattttgacgaacgaagctctacgatctctctggttcttcacttggctcttctctctttttctccccca 611921  T
Q  233 aaggcttgtt 242  Q
    ||||||||||    
T  611922 aaggcttgtt 611931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 134 - 242
Target Start/End: Complemental strand, 13750309 - 13750201
Alignment:
Q  134 attattgaaggttagtcccacccttaccttaattctgacgaacgaagttctacgatctctccggttcttcacttggctcttctctctttttctcccccaa 233  Q
    ||||||||  ||||| | || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  13750309 attattgagagttagcctcagccttaccttaattctgacgaacgaagctctacgatctctccggttcttcacttggctcttctccctttttctcccccaa 13750210  T
Q  234 aggcttgtt 242  Q
    || ||||||    
T  13750209 agacttgtt 13750201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 113 - 164
Target Start/End: Complemental strand, 22375851 - 22375800
Alignment:
Q  113 tttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  22375851 tttcagaatcacatactcagaattattgaaggttagtcccacccttacctta 22375800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 110 - 166
Target Start/End: Original strand, 19401092 - 19401148
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaat 166  Q
    |||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||    
T  19401092 aattttcagaatcatacacttagaattagtgaaggttagtcccacccttaccttaat 19401148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 110 - 164
Target Start/End: Complemental strand, 18259227 - 18259174
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  18259227 aattttcagaatca-atgctcagaattattgaaggttagtcccacccttacctta 18259174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 164
Target Start/End: Complemental strand, 28103498 - 28103448
Alignment:
Q  114 ttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  28103498 ttcagaatcacatactcagaattattgaagattagtcccacccttacctta 28103448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 165
Target Start/End: Complemental strand, 17027918 - 17027863
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||||||||||||||| |||||  ||||||||| ||||||||||||||||||||||    
T  17027918 aattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttaa 17027863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 25536003 - 25536058
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||||||||||||||| |||||  ||||||||| ||||||||||||||||||||||    
T  25536003 aattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttaa 25536058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 25689421 - 25689476
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||||||||||||||| |||||  ||||||||| ||||||||||||||||||||||    
T  25689421 aattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttaa 25689476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 25721093 - 25721148
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||||||||||||||| |||||  ||||||||| ||||||||||||||||||||||    
T  25721093 aattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttaa 25721148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 25753436 - 25753491
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||||||||||||||| |||||  ||||||||| ||||||||||||||||||||||    
T  25753436 aattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttaa 25753491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 25755606 - 25755661
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||||||||||||||| |||||  ||||||||| ||||||||||||||||||||||    
T  25755606 aattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttaa 25755661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 34963968 - 34964023
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||||||||||||||| |||||  ||||||||| ||||||||||||||||||||||    
T  34963968 aattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttaa 34964023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 114 - 164
Target Start/End: Complemental strand, 20733294 - 20733244
Alignment:
Q  114 ttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||| ||||||| |||||||||||||||||| |||||||||||||    
T  20733294 ttcagaatcacatactcaaaattattgaaggttagtctcacccttacctta 20733244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 164
Target Start/End: Original strand, 22783122 - 22783176
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||||||||| |||||  ||||||||| |||||||||||||||||||||    
T  22783122 aattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 22783176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 114 - 164
Target Start/End: Original strand, 27852208 - 27852258
Alignment:
Q  114 ttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||| ||||| ||||| ||||||||||||||||||||||||||||    
T  27852208 ttcagaatcacatacttagaatgattgaaggttagtcccacccttacctta 27852258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 163
Target Start/End: Original strand, 1599029 - 1599082
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctt 163  Q
    |||||||||||||||| |||||  ||||||||| ||||||||||||||||||||    
T  1599029 aattttcagaatcatagactcaagattattgaatgttagtcccacccttacctt 1599082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 19005936 - 19005991
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||||||||||||||| |||||  ||||||||| ||||||| ||||||||||||||    
T  19005936 aattttcagaatcatagactcaagattattgaatgttagtctcacccttaccttaa 19005991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 23993017 - 23993072
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||||||||||| ||| |||||  ||||||||| ||||||||||||||||||||||    
T  23993017 aattttcagaattatagactcaagattattgaatgttagtcccacccttaccttaa 23993072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 164
Target Start/End: Original strand, 8055924 - 8055978
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    ||||||| |||||||| |||||  ||||||||| |||||||||||||||||||||    
T  8055924 aattttcggaatcatagactcaagattattgaatgttagtcccacccttacctta 8055978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 164
Target Start/End: Original strand, 16198393 - 16198447
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||||||||| |||||  ||||||||| ||||||| |||||||||||||    
T  16198393 aattttcagaatcatagactcaagattattgaatgttagtcacacccttacctta 16198447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 164
Target Start/End: Complemental strand, 17882764 - 17882710
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||||||||| |||||  ||||||||| ||||||| |||||||||||||    
T  17882764 aattttcagaatcatagactcaagattattgaatgttagtctcacccttacctta 17882710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 164
Target Start/End: Complemental strand, 31629915 - 31629861
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||||||||| |||||  ||||||||| ||||||| |||||||||||||    
T  31629915 aattttcagaatcatagactcaagattattgaatgttagtctcacccttacctta 31629861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 164
Target Start/End: Original strand, 16246233 - 16246270
Alignment:
Q  127 actcagaattattgaaggttagtcccacccttacctta 164  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  16246233 actcataattattgaaggttagtcccacccttacctta 16246270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 203
Target Start/End: Original strand, 24441677 - 24441746
Alignment:
Q  134 attattgaaggttagtcccacccttaccttaattctgacgaacgaagttctacgatctctccggttcttc 203  Q
    ||||||||  ||||||| ||||||||||||||||  || |||||||| ||||||||  ||||||||||||    
T  24441677 attattgagagttagtctcacccttaccttaatttagatgaacgaagctctacgattgctccggttcttc 24441746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 164
Target Start/End: Original strand, 18459306 - 18459358
Alignment:
Q  112 ttttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    ||||||||||||||||||||  ||||  | |||||||||||||||||||||||    
T  18459306 ttttcagaatcatatactcatgattaaagtaggttagtcccacccttacctta 18459358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 18914913 - 18914967
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||||||||||||||| | |||  ||||||||| ||||||||||||||||||||||    
T  18914913 aattttcagaatcataga-tcaagattattgaatgttagtcccacccttaccttaa 18914967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 19003475 - 19003530
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||||||||||||||| |||||  ||||||||| ||||||  ||||||||||||||    
T  19003475 aattttcagaatcatagactcaagattattgaatgttagtttcacccttaccttaa 19003530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 165
Target Start/End: Complemental strand, 30676093 - 30676038
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||||||||||||||| |||||  ||||||| | ||||||| ||||||||||||||    
T  30676093 aattttcagaatcatagactcaagattattgcatgttagtctcacccttaccttaa 30676038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 164
Target Start/End: Original strand, 23501691 - 23501724
Alignment:
Q  131 agaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||||||||||||| |||||||||||||    
T  23501691 agaattattgaaggttagtctcacccttacctta 23501724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 163
Target Start/End: Complemental strand, 15704597 - 15704565
Alignment:
Q  131 agaattattgaaggttagtcccacccttacctt 163  Q
    |||||||||||||| ||||||||||||||||||    
T  15704597 agaattattgaaggctagtcccacccttacctt 15704565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 163
Target Start/End: Complemental strand, 19772699 - 19772667
Alignment:
Q  131 agaattattgaaggttagtcccacccttacctt 163  Q
    |||||||||||||| ||||||||||||||||||    
T  19772699 agaattattgaaggctagtcccacccttacctt 19772667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 163
Target Start/End: Original strand, 22806758 - 22806790
Alignment:
Q  131 agaattattgaaggttagtcccacccttacctt 163  Q
    |||||||||||||| ||||||||||||||||||    
T  22806758 agaattattgaaggctagtcccacccttacctt 22806790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 86; Significance: 3e-41; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 137 - 242
Target Start/End: Original strand, 16644985 - 16645090
Alignment:
Q  137 attgaaggttagtcccacccttaccttaattctgacgaacgaagttctacgatctctccggttcttcacttggctcttctctctttttctcccccaaagg 236  Q
    |||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  16644985 attgaatgttagtcccacccttaccttaattctgaccaacgaagctctacgatctctccggttcttcacttggctcttctccctttttctcccccaaagg 16645084  T
Q  237 cttgtt 242  Q
     |||||    
T  16645085 tttgtt 16645090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 134 - 242
Target Start/End: Original strand, 14819102 - 14819210
Alignment:
Q  134 attattgaaggttagtcccacccttaccttaattctgacgaacgaagttctacgatctctccggttcttcacttggctcttctctctttttctcccccaa 233  Q
    ||||||||  ||||| | |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  14819102 attattgagagttagcctcacccttaccttaattctaacgaacgaagatctacgatctctccggttcttcacttggcacttctccctttttctcccccaa 14819201  T
Q  234 aggcttgtt 242  Q
    |||||||||    
T  14819202 aggcttgtt 14819210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 152 - 242
Target Start/End: Complemental strand, 3393767 - 3393677
Alignment:
Q  152 cacccttaccttaattctgacgaacgaagttctacgatctctccggttcttcacttggctcttctctctttttctcccccaaaggcttgtt 242  Q
    ||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  3393767 cacccttaccttaattccgacgaacgaagctctatgatctctccggttcttcacttggctcttctccctttttcttccccaaaggcttgtt 3393677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 113 - 203
Target Start/End: Complemental strand, 6804943 - 6804853
Alignment:
Q  113 tttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaattctgacgaacgaagttctacgatctctccggttcttc 203  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||  || |||||||| | ||| ||||||| ||||||||    
T  6804943 tttcagaatcacatactcagaattattgaaggttagtctcacccttaccttaatttagatgaacgaagctttacaatctctctggttcttc 6804853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 134 - 218
Target Start/End: Complemental strand, 52337986 - 52337902
Alignment:
Q  134 attattgaaggttagtcccacccttaccttaattctgacgaacgaagttctacgatctctccggttcttcacttggctcttctct 218  Q
    ||||||||  ||||| | |||||||||||||||||||| ||| |||  ||||||||||||||||||||| |||||||||||||||    
T  52337986 attattgagagttagcctcacccttaccttaattctgatgaatgaatctctacgatctctccggttctttacttggctcttctct 52337902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 113 - 164
Target Start/End: Original strand, 46752107 - 46752158
Alignment:
Q  113 tttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  46752107 tttcagaatcacatactcagaattattgaaggttagtcccacccttacctta 46752158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 133 - 211
Target Start/End: Original strand, 43929412 - 43929490
Alignment:
Q  133 aattattgaaggttagtcccacccttaccttaattctgacgaacgaagttctacgatctctccggttcttcacttggct 211  Q
    |||||||||| ||||| | ||||||||||||||||  || |||| ||| ||||| ||||||||||||||||||||||||    
T  43929412 aattattgaaagttagcctcacccttaccttaatttagatgaacaaagctctacaatctctccggttcttcacttggct 43929490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 164
Target Start/End: Complemental strand, 52988908 - 52988858
Alignment:
Q  114 ttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  52988908 ttcagaatcacatactcagaattattgaaggttagtctcacccttacctta 52988858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 110 - 166
Target Start/End: Complemental strand, 49968913 - 49968857
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaat 166  Q
    |||||||||||||||| ||| ||||||| |||||||||||||||| |||||||||||    
T  49968913 aattttcagaatcatacacttagaattagtgaaggttagtcccactcttaccttaat 49968857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 10379927 - 10379982
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||||||||||||||| |||||  ||||||||| ||||||||||||||||||||||    
T  10379927 aattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttaa 10379982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 165
Target Start/End: Complemental strand, 20629566 - 20629511
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||||||||||||||| |||||  ||||||||| ||||||||||||||||||||||    
T  20629566 aattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttaa 20629511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 24514271 - 24514326
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||||||||||||||| |||||  ||||||||| ||||||||||||||||||||||    
T  24514271 aattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttaa 24514326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 165
Target Start/End: Complemental strand, 55318678 - 55318623
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||||||||||||||| |||||  ||||||||| ||||||||||||||||||||||    
T  55318678 aattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttaa 55318623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 164
Target Start/End: Complemental strand, 12119239 - 12119185
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||||||||| |||||  ||||||||| |||||||||||||||||||||    
T  12119239 aattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 12119185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 46823050 - 46823104
Alignment:
Q  111 attttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    ||||||||||||||| |||||  ||||||||| ||||||||||||||||||||||    
T  46823050 attttcagaatcatagactcaagattattgaatgttagtcccacccttaccttaa 46823104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 163
Target Start/End: Complemental strand, 13937348 - 13937295
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctt 163  Q
    |||||||||||||||| |||||  ||||||||| ||||||||||||||||||||    
T  13937348 aattttcagaatcatagactcaagattattgaatgttagtcccacccttacctt 13937295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 115 - 164
Target Start/End: Original strand, 14967187 - 14967236
Alignment:
Q  115 tcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    ||||||||| || ||||||||||||||||||||||||| |||||||||||    
T  14967187 tcagaatcacattctcagaattattgaaggttagtcccccccttacctta 14967236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 163
Target Start/End: Complemental strand, 17444137 - 17444084
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctt 163  Q
    |||||||||||||||| |||||  ||||||||| ||||||||||||||||||||    
T  17444137 aattttcagaatcatagactcaagattattgaatgttagtcccacccttacctt 17444084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 163
Target Start/End: Original strand, 41124727 - 41124780
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctt 163  Q
    |||||||||||||||| |||||  ||||||||| ||||||||||||||||||||    
T  41124727 aattttcagaatcatagactcaagattattgaatgttagtcccacccttacctt 41124780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 163
Target Start/End: Original strand, 8899611 - 8899664
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctt 163  Q
    |||||||||||||||| |||||  ||||||||| ||||||| ||||||||||||    
T  8899611 aattttcagaatcatagactcaagattattgaatgttagtctcacccttacctt 8899664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 163
Target Start/End: Complemental strand, 13938354 - 13938301
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctt 163  Q
    |||||||||||||||| |||||  ||||||||| |||| |||||||||||||||    
T  13938354 aattttcagaatcatagactcaagattattgaatgttattcccacccttacctt 13938301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 163
Target Start/End: Complemental strand, 16282132 - 16282079
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctt 163  Q
    |||||||||||||||| |||||  ||||||||| ||||||| ||||||||||||    
T  16282132 aattttcagaatcatagactcaagattattgaatgttagtctcacccttacctt 16282079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 163
Target Start/End: Complemental strand, 38961211 - 38961158
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctt 163  Q
    |||||||||||||||| |||||  ||||||||| ||||||| ||||||||||||    
T  38961211 aattttcagaatcatagactcaagattattgaatgttagtctcacccttacctt 38961158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 164
Target Start/End: Complemental strand, 50350868 - 50350816
Alignment:
Q  112 ttttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||| |||||||||  ||||  |||||||||||||||||||||||||    
T  50350868 ttttcagaattatatactcatgattaaagaaggttagtcccacccttacctta 50350816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 160
Target Start/End: Original strand, 40957234 - 40957277
Alignment:
Q  117 agaatcatatactcagaattattgaaggttagtcccacccttac 160  Q
    ||||||||||||||||||||||| |||||||||| ||| |||||    
T  40957234 agaatcatatactcagaattattaaaggttagtctcactcttac 40957277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 153
Target Start/End: Complemental strand, 45530656 - 45530613
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtccca 153  Q
    |||||||||||||||||||| ||||||||| || ||||||||||    
T  45530656 aattttcagaatcatatacttagaattattaaatgttagtccca 45530613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 163
Target Start/End: Complemental strand, 18699463 - 18699431
Alignment:
Q  131 agaattattgaaggttagtcccacccttacctt 163  Q
    |||||||||||||| ||||||||||||||||||    
T  18699463 agaattattgaaggctagtcccacccttacctt 18699431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 163
Target Start/End: Complemental strand, 22758867 - 22758835
Alignment:
Q  131 agaattattgaaggttagtcccacccttacctt 163  Q
    |||||||||||||||||||| ||||||||||||    
T  22758867 agaattattgaaggttagtctcacccttacctt 22758835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 144 - 242
Target Start/End: Original strand, 8195 - 8293
Alignment:
Q  144 gttagtcccacccttaccttaattctgacgaacgaagttctacgatctctccggttcttcacttggctcttctctctttttctcccccaaaggcttgtt 242  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  8195 gttagtctcacccttactttaattctgacgaacgaagttctacgatctctccggttcttcacttggctcttctccctttttctcccccaaagacttgtt 8293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 81; Significance: 3e-38; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 134 - 242
Target Start/End: Original strand, 10705751 - 10705859
Alignment:
Q  134 attattgaaggttagtcccacccttaccttaattctgacgaacgaagttctacgatctctccggttcttcacttggctcttctctctttttctcccccaa 233  Q
    ||||||||  |||||||  ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  10705751 attattgagagttagtcttacccttaccttaattatgacgaacgaagctctacgatctctccggttcttcacttggctcttctccctttttctcccccaa 10705850  T
Q  234 aggcttgtt 242  Q
    |||||||||    
T  10705851 aggcttgtt 10705859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 134 - 242
Target Start/End: Original strand, 10919521 - 10919629
Alignment:
Q  134 attattgaaggttagtcccacccttaccttaattctgacgaacgaagttctacgatctctccggttcttcacttggctcttctctctttttctcccccaa 233  Q
    ||||||||  |||||||  ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  10919521 attattgagagttagtcttacccttaccttaattatgacgaacgaagctctacgatctctccggttcttcacttggctcttctccctttttctcccccaa 10919620  T
Q  234 aggcttgtt 242  Q
    |||||||||    
T  10919621 aggcttgtt 10919629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 152 - 232
Target Start/End: Original strand, 8711571 - 8711651
Alignment:
Q  152 cacccttaccttaattctgacgaacgaagttctacgatctctccggttcttcacttggctcttctctctttttctccccca 232  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  8711571 cacccttaccttaattctgacgaacgaagctctacgatctctctggttcttcacttggctcttctccctttttctccccca 8711651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 133 - 242
Target Start/End: Original strand, 29856711 - 29856823
Alignment:
Q  133 aattattgaaggttagtcccacccttaccttaattctgacgaacgaagttctacgatctctccggttcttcacttggctcttctc---tctttttctccc 229  Q
    |||||||| | ||||| | |||||||||||||||| |||||||||||| |||||||| |||| ||||||||||||||||||||||   | ||||||||||    
T  29856711 aattattggaagttagcctcacccttaccttaattatgacgaacgaagctctacgatatctctggttcttcacttggctcttctcttttgtttttctccc 29856810  T
Q  230 ccaaaggcttgtt 242  Q
    |||||||||||||    
T  29856811 ccaaaggcttgtt 29856823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 134 - 214
Target Start/End: Complemental strand, 14931157 - 14931077
Alignment:
Q  134 attattgaaggttagtcccacccttaccttaattctgacgaacgaagttctacgatctctccggttcttcacttggctctt 214  Q
    ||||||||  ||||| | ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  14931157 attattgagagttagcctcacccttaccttaattctgacgaacgaagctctacgatctcttcggttcttcacttggctctt 14931077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 134 - 242
Target Start/End: Original strand, 3338385 - 3338502
Alignment:
Q  134 attattgaaggttagtcccacccttaccttaattctgacgaacgaagttctacgatctctccggttcttca---------cttggctcttctctcttttt 224  Q
    ||||||||  ||||| | ||||||||||||||||||||| ||||||| |||||||||||||  ||||||||         ||||||||||||| ||||||    
T  3338385 attattgagagttagcctcacccttaccttaattctgacaaacgaagctctacgatctctctagttcttcacttggataccttggctcttctcccttttt 3338484  T
Q  225 ctcccccaaaggcttgtt 242  Q
    ||||||||||||||||||    
T  3338485 ctcccccaaaggcttgtt 3338502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 152 - 217
Target Start/End: Original strand, 6512660 - 6512725
Alignment:
Q  152 cacccttaccttaattctgacgaacgaagttctacgatctctccggttcttcacttggctcttctc 217  Q
    ||||||||||||||||| ||  ||||||| ||||||||||||||||||||||||||||||||||||    
T  6512660 cacccttaccttaattcagatcaacgaagctctacgatctctccggttcttcacttggctcttctc 6512725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 27996790 - 27996843
Alignment:
Q  111 attttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  27996790 attttcagaatcacatactcagaattattgaaggttagtcccacccttacctta 27996843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 114 - 164
Target Start/End: Original strand, 10057663 - 10057713
Alignment:
Q  114 ttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  10057663 ttcagaatcacatactcagaattattgaaggttagtcccacccttacctta 10057713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 182 - 242
Target Start/End: Original strand, 8711653 - 8711713
Alignment:
Q  182 tctacgatctctccggttcttcacttggctcttctctctttttctcccccaaaggcttgtt 242  Q
    |||||||||||| |||||||||||||| |||||||| ||||||||| ||||||||||||||    
T  8711653 tctacgatctctacggttcttcacttgactcttctccctttttctctcccaaaggcttgtt 8711713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 165
Target Start/End: Complemental strand, 19617449 - 19617394
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||||||||||||||| |||||  ||||||||| ||||||||||||||||||||||    
T  19617449 aattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttaa 19617394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 164
Target Start/End: Original strand, 363161 - 363215
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||||||||| |||||  ||||||||| |||||||||||||||||||||    
T  363161 aattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 363215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 114 - 164
Target Start/End: Original strand, 19739740 - 19739790
Alignment:
Q  114 ttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||| ||||| |||||||||||||||||||||||||| |||||||||||||    
T  19739740 ttcataatcacatactcagaattattgaaggttagtctcacccttacctta 19739790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 165
Target Start/End: Original strand, 19858403 - 19858456
Alignment:
Q  112 ttttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||||||||||||| |||||  ||||||||| ||||||||||||||||||||||    
T  19858403 ttttcagaatcatagactcaagattattgaatgttagtcccacccttaccttaa 19858456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 165
Target Start/End: Complemental strand, 14745751 - 14745699
Alignment:
Q  113 tttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    ||||||||||||| |||||  ||||||||| ||||||||||||||||||||||    
T  14745751 tttcagaatcatagactcaagattattgaatgttagtcccacccttaccttaa 14745699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 164
Target Start/End: Original strand, 26014285 - 26014336
Alignment:
Q  113 tttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    ||||| ||||| |||||||  |||||||||||||||||||||||||||||||    
T  26014285 tttcaaaatcacatactcaagattattgaaggttagtcccacccttacctta 26014336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 165
Target Start/End: Complemental strand, 52872456 - 52872401
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||||||||||||||| |||||  ||||||||| |||| |||||||||||||||||    
T  52872456 aattttcagaatcatagactcaagattattgaatgttaatcccacccttaccttaa 52872401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 164
Target Start/End: Complemental strand, 1836788 - 1836734
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||||| ||| |||||  ||||||||| |||||||||||||||||||||    
T  1836788 aattttcagaatgatagactcaagattattgaatgttagtcccacccttacctta 1836734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 164
Target Start/End: Original strand, 3515795 - 3515849
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||||||||| |||||  ||||||||| ||||||| |||||||||||||    
T  3515795 aattttcagaatcatagactcaagattattgaatgttagtctcacccttacctta 3515849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 152 - 229
Target Start/End: Complemental strand, 3863303 - 3863225
Alignment:
Q  152 cacccttaccttaatt-ctgacgaacgaagttctacgatctctccggttcttcacttggctcttctctctttttctccc 229  Q
    |||||||||||||||| | ||||||| | |||| || || |||||| | |||||||||||||||||| |||||||||||    
T  3863303 cacccttaccttaatttcagacgaacaacgttcaacaatttctccgatccttcacttggctcttctccctttttctccc 3863225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 152 - 229
Target Start/End: Complemental strand, 3872060 - 3871982
Alignment:
Q  152 cacccttaccttaatt-ctgacgaacgaagttctacgatctctccggttcttcacttggctcttctctctttttctccc 229  Q
    |||||||||||||||| | ||||||| | |||| || || |||||| | |||||||||||||||||| |||||||||||    
T  3872060 cacccttaccttaatttcagacgaacaacgttcaacaatttctccgatccttcacttggctcttctccctttttctccc 3871982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 164
Target Start/End: Complemental strand, 7640454 - 7640400
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||||||||| |||||  ||||||||| ||||||| |||||||||||||    
T  7640454 aattttcagaatcatagactcaagattattgaatgttagtctcacccttacctta 7640400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 159
Target Start/End: Complemental strand, 11822 - 11773
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccaccctta 159  Q
    |||||||||||||||| |||||  ||||||||| ||||||||||||||||    
T  11822 aattttcagaatcatagactcaagattattgaatgttagtcccaccctta 11773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 165
Target Start/End: Complemental strand, 12778248 - 12778195
Alignment:
Q  112 ttttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||||||||||||| |||||  ||||||||| ||||||||||||||| ||||||    
T  12778248 ttttcagaatcatagactcaagattattgaatgttagtcccacccttgccttaa 12778195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 163
Target Start/End: Original strand, 52313542 - 52313595
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctt 163  Q
    |||||||||||||||| ||| |  ||||||||| ||||||||||||||||||||    
T  52313542 aattttcagaatcatagacttaagattattgaatgttagtcccacccttacctt 52313595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 166
Target Start/End: Complemental strand, 13591118 - 13591067
Alignment:
Q  115 tcagaatcatatactcagaattattgaaggttagtcccacccttaccttaat 166  Q
    ||||| ||| |||||||  |||||| ||||||||||||||||||||||||||    
T  13591118 tcagattcacatactcaagattatttaaggttagtcccacccttaccttaat 13591067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 165
Target Start/End: Complemental strand, 14970081 - 14970026
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||||||||||||| | |||||  ||||||||| ||||||| ||||||||||||||    
T  14970081 aattttcagaatcacagactcaagattattgaatgttagtctcacccttaccttaa 14970026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 164
Target Start/End: Complemental strand, 15354901 - 15354846
Alignment:
Q  109 aaattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    ||||| ||||||||||| |||||  ||||||||| |||||| ||||||||||||||    
T  15354901 aaattatcagaatcatagactcaagattattgaatgttagttccacccttacctta 15354846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 165
Target Start/End: Complemental strand, 15489523 - 15489468
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||||||||||| ||| |||||  ||||||||| |||| |||||||||||||||||    
T  15489523 aattttcagaattatagactcaagattattgaatgttattcccacccttaccttaa 15489468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 164
Target Start/End: Complemental strand, 18214578 - 18214524
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    ||||| |||||||||| |||||  ||||||||| ||||||||||| |||||||||    
T  18214578 aatttgcagaatcatagactcaagattattgaatgttagtcccacgcttacctta 18214524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 164
Target Start/End: Original strand, 44616185 - 44616239
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||||||||| || ||  ||||||||| ||||||| |||||||||||||    
T  44616185 aattttcagaatcatagacccaagattattgaatgttagtctcacccttacctta 44616239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 166
Target Start/End: Original strand, 3485863 - 3485919
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaat 166  Q
    |||||||||||||||| ||| |  ||||||||| ||||||| ||||||||| |||||    
T  3485863 aattttcagaatcatagacttaagattattgaatgttagtctcacccttacattaat 3485919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 164
Target Start/End: Original strand, 13165132 - 13165184
Alignment:
Q  112 ttttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||| |||| ||||||||  ||||  |||||||||||||||||||||||||    
T  13165132 ttttcacaatcctatactcatgattaaagaaggttagtcccacccttacctta 13165184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 164
Target Start/End: Original strand, 14477631 - 14477683
Alignment:
Q  112 ttttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||| |||||||||  ||||  |||||||||| ||||||||||||||    
T  14477631 ttttcagaattatatactcatgattaaagaaggttagtgccacccttacctta 14477683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 164
Target Start/End: Original strand, 18463023 - 18463075
Alignment:
Q  112 ttttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||| |||||||||  ||||  |||||||||||||||| ||||||||    
T  18463023 ttttcagaattatatactcatgattaaagaaggttagtcccacctttacctta 18463075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 79; Significance: 5e-37; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 134 - 240
Target Start/End: Complemental strand, 40554548 - 40554442
Alignment:
Q  134 attattgaaggttagtcccacccttaccttaattctgacgaacgaagttctacgatctctccggttcttcacttggctcttctctctttttctcccccaa 233  Q
    ||||||||  ||||| | ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  40554548 attattgagagttagcctcacccttaccttaattctgacaaacgaagctctacgatctctccggttcttcacttggctcttctccctttttctcccccaa 40554449  T
Q  234 aggcttg 240  Q
    |||||||    
T  40554448 aggcttg 40554442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 45695965 - 45696041
Alignment:
Q  18 agtactgtcactatgtgacaaaccggtccctatttaataacactaataattgacgacaaaagtagataaaatcaata 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45695965 agtactgtcactatgtgacaaaccggtccctatttaataacactaataattgacgacaaaagtagataaaatcaata 45696041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 110 - 242
Target Start/End: Complemental strand, 23461687 - 23461546
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaattctgacgaacgaagttctacgatctctccggttcttcactt-- 207  Q
    |||||||||||||||| |||||  ||||||||| ||||||| ||||||||||||||||  || |||||||| |||||||||| |||||||||||||||      
T  23461687 aattttcagaatcatagactcaagattattgaatgttagtctcacccttaccttaatttagatgaacgaagctctacgatctttccggttcttcacttgg 23461588  T
Q  208 -------ggctcttctctctttttctcccccaaaggcttgtt 242  Q
           |||||||||| ||||||||||||||||||||||||    
T  23461587 ctaccttggctcttctccctttttctcccccaaaggcttgtt 23461546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 133 - 213
Target Start/End: Original strand, 4326118 - 4326198
Alignment:
Q  133 aattattgaaggttagtcccacccttaccttaattctgacgaacgaagttctacgatctctccggttcttcacttggctct 213  Q
    |||||| ||| ||||| | |||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||    
T  4326118 aattatcgaaagttagcctcacccttaccttaattctaacgaacgaagctctacaatctctccggttcttcacttggctct 4326198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 114 - 165
Target Start/End: Original strand, 11085522 - 11085573
Alignment:
Q  114 ttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  11085522 ttcagaatcacatactcagaattattgaaggttagtcccacccttaccttaa 11085573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 15203177 - 15203230
Alignment:
Q  111 attttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  15203177 attttcagaatcacatactcataattattgaaggttagtcccacccttacctta 15203230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 8469330 - 8469385
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||    
T  8469330 aattttcagaatcatagactcaaaattattgaatgttagtcccacccttaccttaa 8469385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 110 - 164
Target Start/End: Complemental strand, 15095691 - 15095637
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||    
T  15095691 aattttcagaatcatacacttagaattagtgaaggttagtcccacccttacctta 15095637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 113 - 165
Target Start/End: Complemental strand, 14980721 - 14980669
Alignment:
Q  113 tttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    ||||||||||| |||||||  ||||||||||||||||||||||||||||||||    
T  14980721 tttcagaatcacatactcaagattattgaaggttagtcccacccttaccttaa 14980669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 113 - 165
Target Start/End: Complemental strand, 15410197 - 15410145
Alignment:
Q  113 tttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    ||||||||||| |||||||  ||||||||||||||||||||||||||||||||    
T  15410197 tttcagaatcacatactcaagattattgaaggttagtcccacccttaccttaa 15410145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 8941262 - 8941317
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||||||||||||||| |||||  ||||||||| ||||||||||||||||||||||    
T  8941262 aattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttaa 8941317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 114 - 165
Target Start/End: Original strand, 11091648 - 11091699
Alignment:
Q  114 ttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||| ||||| |||||||||||| ||||||||||||||||||||||||||||    
T  11091648 ttcataatcacatactcagaattgttgaaggttagtcccacccttaccttaa 11091699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 165
Target Start/End: Complemental strand, 14269138 - 14269083
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||||||||||||||| |||||  ||||||||| ||||||||||||||||||||||    
T  14269138 aattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttaa 14269083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 113 - 164
Target Start/End: Original strand, 15624019 - 15624070
Alignment:
Q  113 tttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    ||||||||||||| ||| |||||||||||||||||||| |||||||||||||    
T  15624019 tttcagaatcatacacttagaattattgaaggttagtctcacccttacctta 15624070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 164
Target Start/End: Complemental strand, 5294486 - 5294432
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||||||||| |||||  ||||||||| |||||||||||||||||||||    
T  5294486 aattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 5294432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 164
Target Start/End: Complemental strand, 5295659 - 5295605
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||||||||| |||||  ||||||||| |||||||||||||||||||||    
T  5295659 aattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 5295605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 164
Target Start/End: Complemental strand, 5296832 - 5296778
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||||||||| |||||  ||||||||| |||||||||||||||||||||    
T  5296832 aattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 5296778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 164
Target Start/End: Original strand, 11054711 - 11054765
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||||||| | ||| ||||| ||||||||||||||||||||||||||||    
T  11054711 aattttcagaatcaaacacttagaatcattgaaggttagtcccacccttacctta 11054765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 164
Target Start/End: Complemental strand, 11392570 - 11392516
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||||||||| |||||  ||||||||| |||||||||||||||||||||    
T  11392570 aattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 11392516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 211
Target Start/End: Complemental strand, 44190246 - 44190168
Alignment:
Q  133 aattattgaaggttagtcccacccttaccttaattctgacgaacgaagttctacgatctctccggttcttcacttggct 211  Q
    |||||||||| ||||| | |||| |||||||||||  ||||||| ||| ||||| |||||||||||||||||| |||||    
T  44190246 aattattgaaagttagcctcaccattaccttaatttagacgaacaaagctctacaatctctccggttcttcacctggct 44190168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 163
Target Start/End: Original strand, 11973143 - 11973196
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctt 163  Q
    |||||||||||||||| |||||  ||||||||| ||||||||||||||||||||    
T  11973143 aattttcagaatcatagactcaagattattgaatgttagtcccacccttacctt 11973196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 164
Target Start/End: Complemental strand, 10500790 - 10500735
Alignment:
Q  109 aaattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    ||||||||||||||||| |||||  ||||||||| | |||||||||||||||||||    
T  10500790 aaattttcagaatcatagactcaagattattgaatgatagtcccacccttacctta 10500735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 164
Target Start/End: Complemental strand, 14156447 - 14156392
Alignment:
Q  109 aaattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    ||||||||||||||||| |||||  ||||||||| | |||||||||||||||||||    
T  14156447 aaattttcagaatcatagactcaagattattgaatgatagtcccacccttacctta 14156392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 164
Target Start/End: Complemental strand, 30820202 - 30820151
Alignment:
Q  113 tttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    ||||||||| | ||||||||||||| ||||||||||||||||||| ||||||    
T  30820202 tttcagaattacatactcagaattactgaaggttagtcccaccctcacctta 30820151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 164
Target Start/End: Complemental strand, 36685197 - 36685146
Alignment:
Q  113 tttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    ||||||||| | |||||||||||||||||||||| || ||||||||||||||    
T  36685197 tttcagaattacatactcagaattattgaaggttggttccacccttacctta 36685146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 164
Target Start/End: Complemental strand, 9945064 - 9945010
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||||||||| |||||  ||||||||| ||||||| |||||||||||||    
T  9945064 aattttcagaatcatagactcaagattattgaatgttagtctcacccttacctta 9945010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 164
Target Start/End: Complemental strand, 14317570 - 14317516
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||||||||| |||||  ||||||||| ||||||| |||||||||||||    
T  14317570 aattttcagaatcatagactcaagattattgaatgttagtctcacccttacctta 14317516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 164
Target Start/End: Original strand, 15140211 - 15140265
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||||||||| ||| ||||||| |||||||||||| ||||| |||||||    
T  15140211 aattttcagaatcatacacttagaattagtgaaggttagtctcacccatacctta 15140265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 164
Target Start/End: Complemental strand, 26355248 - 26355194
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    ||||||| |||||||| |||||  ||||||||| |||||||||||||||||||||    
T  26355248 aattttcggaatcatagactcaagattattgaatgttagtcccacccttacctta 26355194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 164
Target Start/End: Complemental strand, 26357700 - 26357646
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    ||||||| |||||||| |||||  ||||||||| |||||||||||||||||||||    
T  26357700 aattttcggaatcatagactcaagattattgaatgttagtcccacccttacctta 26357646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 114 - 164
Target Start/End: Complemental strand, 46579809 - 46579759
Alignment:
Q  114 ttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||| |||||| |||||||||||||||  ||||||||||||||||    
T  46579809 ttcagaatcacatactctgaattattgaaggttgttcccacccttacctta 46579759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 163
Target Start/End: Complemental strand, 21188979 - 21188926
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctt 163  Q
    |||||||||||||||| |||||  |||||| || ||||||||||||||||||||    
T  21188979 aattttcagaatcatagactcaagattattaaatgttagtcccacccttacctt 21188926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 164
Target Start/End: Complemental strand, 8135289 - 8135238
Alignment:
Q  113 tttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    ||||||||||||| ||| || |||| |||||||||||| |||||||||||||    
T  8135289 tttcagaatcatacacttaggattagtgaaggttagtctcacccttacctta 8135238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 166
Target Start/End: Complemental strand, 9724851 - 9724800
Alignment:
Q  115 tcagaatcatatactcagaattattgaaggttagtcccacccttaccttaat 166  Q
    ||||| ||| |||||||  |||||| ||||||||||||||||||||||||||    
T  9724851 tcagattcacatactcaagattatttaaggttagtcccacccttaccttaat 9724800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 165
Target Start/End: Complemental strand, 45846819 - 45846764
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||||||| ||||| | |||||  ||||||||| ||||||||||||||||||||||    
T  45846819 aattttcaaaatcagagactcaagattattgaatgttagtcccacccttaccttaa 45846764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 164
Target Start/End: Original strand, 16214472 - 16214526
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||||||||| |||||  |||||||||  ||| ||||||||||||||||    
T  16214472 aattttcagaatcatagactcaagattattgaatattaatcccacccttacctta 16214526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 164
Target Start/End: Complemental strand, 10658903 - 10658851
Alignment:
Q  113 tttcagaatcatata-ctcagaattattgaaggttagtcccacccttacctta 164  Q
    ||||||||||||| | || |||||||  |||||||||||||||||||||||||    
T  10658903 tttcagaatcatacaacttagaattaaagaaggttagtcccacccttacctta 10658851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 164
Target Start/End: Complemental strand, 12754664 - 12754612
Alignment:
Q  113 tttcagaatcatata-ctcagaattattgaaggttagtcccacccttacctta 164  Q
    ||||||||||||||| || |||||||  ||| |||||||||||||||||||||    
T  12754664 tttcagaatcatataacttagaattagagaaagttagtcccacccttacctta 12754612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 163
Target Start/End: Original strand, 14259413 - 14259445
Alignment:
Q  131 agaattattgaaggttagtcccacccttacctt 163  Q
    |||||||||||||| ||||||||||||||||||    
T  14259413 agaattattgaaggctagtcccacccttacctt 14259445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 163
Target Start/End: Complemental strand, 14928322 - 14928290
Alignment:
Q  131 agaattattgaaggttagtcccacccttacctt 163  Q
    ||||||| |||||||||||||||||||||||||    
T  14928322 agaattactgaaggttagtcccacccttacctt 14928290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 163
Target Start/End: Complemental strand, 15351788 - 15351756
Alignment:
Q  131 agaattattgaaggttagtcccacccttacctt 163  Q
    ||||||| |||||||||||||||||||||||||    
T  15351788 agaattactgaaggttagtcccacccttacctt 15351756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 163
Target Start/End: Original strand, 32302246 - 32302278
Alignment:
Q  131 agaattattgaaggttagtcccacccttacctt 163  Q
    |||||||||||||| ||||||||||||||||||    
T  32302246 agaattattgaaggctagtcccacccttacctt 32302278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 134 - 242
Target Start/End: Original strand, 7697 - 7805
Alignment:
Q  134 attattgaaggttagtcccacccttaccttaattctgacgaacgaagttctacgatctctccggttcttcacttggctcttctctctttttctcccccaa 233  Q
    ||||||||  ||||| | ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  7697 attattgagagttagcctcacccttaccttaattctgacgaacgaagctctacaatctctccggttcttcacttggctcttctccctttttctcccccaa 7796  T
Q  234 aggcttgtt 242  Q
    | |||||||    
T  7797 aagcttgtt 7805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 133 - 242
Target Start/End: Original strand, 22006 - 22115
Alignment:
Q  133 aattattgaaggttagtcccacccttaccttaattctgacgaacgaagttctacgatctctccggttcttcacttggctcttctctctttttctccccca 232  Q
    |||||||||| ||||| | ||||||||||||||||  || |||||||| |||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  22006 aattattgaaagttagcctcacccttaccttaatttagatgaacgaagctctacgatctcttcggttcttcacttggctcttctccctttttctccccca 22105  T
Q  233 aaggcttgtt 242  Q
    | ||||||||    
T  22106 agggcttgtt 22115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 1e-31; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 133 - 234
Target Start/End: Complemental strand, 43707084 - 43706983
Alignment:
Q  133 aattattgaaggttagtcccacccttaccttaattctgacgaacgaagttctacgatctctccggttcttcacttggctcttctctctttttctccccca 232  Q
    |||||||||| ||||||  ||||||||| ||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  43707084 aattattgaaagttagtatcacccttacattaattctgacaaacgaagctctacgatctctccgattcttcacttggctcttctccctttttctccccca 43706985  T
Q  233 aa 234  Q
    ||    
T  43706984 aa 43706983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 152 - 217
Target Start/End: Original strand, 22704017 - 22704082
Alignment:
Q  152 cacccttaccttaattctgacgaacgaagttctacgatctctccggttcttcacttggctcttctc 217  Q
    ||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||    
T  22704017 cacccttaccttaattcagatgaacgaagctctacgatctctccggttcttcacttggctcttctc 22704082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 110 - 164
Target Start/End: Original strand, 19358889 - 19358943
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  19358889 aattttcagaatcatatactcagaattattaaaggttagtcccacccttacctta 19358943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 113 - 164
Target Start/End: Complemental strand, 24792810 - 24792759
Alignment:
Q  113 tttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  24792810 tttcagaatcacatactcagaattattgaaggttagtcccacccttacctta 24792759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 110 - 164
Target Start/End: Complemental strand, 18388244 - 18388190
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  18388244 aattttcagaatcatatactcaggattattgaaggttagtctcacccttacctta 18388190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 152 - 218
Target Start/End: Original strand, 23149641 - 23149707
Alignment:
Q  152 cacccttaccttaattctgacgaacgaagttctacgatctctccggttcttcacttggctcttctct 218  Q
    ||||||||||||||||| ||||||| | ||||||| ||||||| ||| |||||||||||||||||||    
T  23149641 cacccttaccttaattcagacgaacaacgttctacaatctctctggtccttcacttggctcttctct 23149707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 152 - 218
Target Start/End: Original strand, 23561431 - 23561497
Alignment:
Q  152 cacccttaccttaattctgacgaacgaagttctacgatctctccggttcttcacttggctcttctct 218  Q
    ||||||||||||||||| ||||||| | ||||||| ||||||| ||| |||||||||||||||||||    
T  23561431 cacccttaccttaattcagacgaacaacgttctacaatctctctggtccttcacttggctcttctct 23561497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 164
Target Start/End: Complemental strand, 34858242 - 34858192
Alignment:
Q  114 ttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  34858242 ttcagaatcacatactcaaaattattgaaggttagtcccacccttacctta 34858192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 164
Target Start/End: Complemental strand, 34873304 - 34873254
Alignment:
Q  114 ttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  34873304 ttcagaatcacatactcaaaattattgaaggttagtcccacccttacctta 34873254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 165
Target Start/End: Complemental strand, 23706400 - 23706345
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||||||||||||||| |||||  ||||||||| ||||||||||||||||||||||    
T  23706400 aattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttaa 23706345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 23932248 - 23932303
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||||||||||||||| |||||  ||||||||| ||||||||||||||||||||||    
T  23932248 aattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttaa 23932303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 113 - 164
Target Start/End: Complemental strand, 24834074 - 24834023
Alignment:
Q  113 tttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||| |||||| ||||||||||||||||| ||||||||||||||||||||||    
T  24834074 tttcggaatcacatactcagaattattgatggttagtcccacccttacctta 24834023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 114 - 165
Target Start/End: Original strand, 27473458 - 27473509
Alignment:
Q  114 ttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||| |||||    
T  27473458 ttcagaatcacatactcataattattgaaggttagtcccacccttaacttaa 27473509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 165
Target Start/End: Complemental strand, 32214304 - 32214249
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||||||||||||||| |||||  ||||||||| ||||||||||||||||||||||    
T  32214304 aattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttaa 32214249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 164
Target Start/End: Original strand, 22106253 - 22106307
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||||||||| |||||  ||||||||| |||||||||||||||||||||    
T  22106253 aattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 22106307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 164
Target Start/End: Original strand, 24918928 - 24918982
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||||||||| |||||  ||||||||| |||||||||||||||||||||    
T  24918928 aattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 24918982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 163
Target Start/End: Original strand, 6726835 - 6726888
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctt 163  Q
    |||||||||||||||| |||||  ||||||||| ||||||||||||||||||||    
T  6726835 aattttcagaatcatagactcaagattattgaatgttagtcccacccttacctt 6726888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 163
Target Start/End: Original strand, 24368615 - 24368668
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctt 163  Q
    |||||||||||||||| |||||  ||||||||| ||||||||||||||||||||    
T  24368615 aattttcagaatcatagactcaagattattgaatgttagtcccacccttacctt 24368668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 110 - 162
Target Start/End: Complemental strand, 24897463 - 24897411
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacct 162  Q
    |||||||||||||||| |||||  ||||||||| |||||||||||||||||||    
T  24897463 aattttcagaatcatagactcaagattattgaatgttagtcccacccttacct 24897411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 110 - 162
Target Start/End: Complemental strand, 24899946 - 24899894
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacct 162  Q
    |||||||||||||||| |||||  ||||||||| |||||||||||||||||||    
T  24899946 aattttcagaatcatagactcaagattattgaatgttagtcccacccttacct 24899894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 110 - 162
Target Start/End: Complemental strand, 24902423 - 24902371
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacct 162  Q
    |||||||||||||||| |||||  ||||||||| |||||||||||||||||||    
T  24902423 aattttcagaatcatagactcaagattattgaatgttagtcccacccttacct 24902371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 110 - 162
Target Start/End: Complemental strand, 24904900 - 24904848
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacct 162  Q
    |||||||||||||||| |||||  ||||||||| |||||||||||||||||||    
T  24904900 aattttcagaatcatagactcaagattattgaatgttagtcccacccttacct 24904848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 110 - 162
Target Start/End: Complemental strand, 24907375 - 24907323
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacct 162  Q
    |||||||||||||||| |||||  ||||||||| |||||||||||||||||||    
T  24907375 aattttcagaatcatagactcaagattattgaatgttagtcccacccttacct 24907323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 165
Target Start/End: Original strand, 20916309 - 20916360
Alignment:
Q  114 ttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||| ||||| ||||||||||||||||||||||||| |||||||||| ||||    
T  20916309 ttcaaaatcacatactcagaattattgaaggttagttccacccttactttaa 20916360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 165
Target Start/End: Complemental strand, 24528921 - 24528866
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||||||||||||||| |||||  ||||||||| ||||||| ||||||||||||||    
T  24528921 aattttcagaatcatagactcaagattattgaatgttagtctcacccttaccttaa 24528866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 24682224 - 24682279
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||||||||||||||| ||| |  ||||||||| ||||||||||||||||||||||    
T  24682224 aattttcagaatcatagacttaagattattgaatgttagtcccacccttaccttaa 24682279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 113 - 163
Target Start/End: Original strand, 25616578 - 25616628
Alignment:
Q  113 tttcagaatcatatactcagaattattgaaggttagtcccacccttacctt 163  Q
    ||||||||||||| |||||  ||||||||| ||||||||||||||||||||    
T  25616578 tttcagaatcatagactcaagattattgaatgttagtcccacccttacctt 25616628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 164
Target Start/End: Complemental strand, 45027274 - 45027220
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||||||||| |||||  ||||||||| ||||||| |||||||||||||    
T  45027274 aattttcagaatcatagactcaagattattgaatgttagtctcacccttacctta 45027220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 163
Target Start/End: Complemental strand, 21154189 - 21154136
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctt 163  Q
    |||||||||||||||| |||||  ||||||||| ||||||||||| ||||||||    
T  21154189 aattttcagaatcatagactcaagattattgaatgttagtcccactcttacctt 21154136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 163
Target Start/End: Original strand, 24671813 - 24671866
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctt 163  Q
    |||||| ||||||||| |||||  ||||||||| ||||||||||||||||||||    
T  24671813 aatttttagaatcatagactcaagattattgaatgttagtcccacccttacctt 24671866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 38968371 - 38968426
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||||| ||||||||| ||| |  ||||||||| ||||||||||||||||||||||    
T  38968371 aatttttagaatcatagacttaagattattgaatgttagtcccacccttaccttaa 38968426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 164
Target Start/End: Original strand, 44072555 - 44072609
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||| ||||||| ||| ||||||| |||| ||||||| |||||||||||||    
T  44072555 aattttcaaaatcatacacttagaattagtgaaagttagtctcacccttacctta 44072609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 164
Target Start/End: Complemental strand, 12626479 - 12626427
Alignment:
Q  112 ttttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||| ||| ||| |  |||| ||||||||||||||||||||||||||    
T  12626479 ttttcagaattatacacttatgattaatgaaggttagtcccacccttacctta 12626427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 164
Target Start/End: Original strand, 22695227 - 22695283
Alignment:
Q  108 caaattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    ||||||||||||||||   ||| |  ||||||||| |||||||||||||||||||||    
T  22695227 caaattttcagaatcaatgacttaagattattgaatgttagtcccacccttacctta 22695283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 168
Target Start/End: Complemental strand, 25584315 - 25584259
Alignment:
Q  112 ttttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaattc 168  Q
    |||||||||| |||||||||  ||||  |||||||| |||||||||||| |||||||    
T  25584315 ttttcagaattatatactcatgattaaagaaggttattcccacccttacgttaattc 25584259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 164
Target Start/End: Complemental strand, 28652604 - 28652552
Alignment:
Q  112 ttttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||| | ||||| |  |||| ||||||||||||||||||||||||||    
T  28652604 ttttcagaattacatacttatgattaatgaaggttagtcccacccttacctta 28652552  T

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Target: scaffold0234 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 134 - 235
Target Start/End: Complemental strand, 26012 - 25911
Alignment:
Q  134 attattgaaggttagtcccacccttaccttaattctgacgaacgaagttctacgatctctccggttcttcacttggctcttctctctttttctcccccaa 233  Q
    ||||||| | ||||| | ||||||||||||||||||||||||| ||| ||||||||||||||  |||||||||||||||||||| |||||||||||||||    
T  26012 attattggaagttagcctcacccttaccttaattctgacgaacaaagctctacgatctctccaattcttcacttggctcttctccctttttctcccccaa 25913  T
Q  234 ag 235  Q
    ||    
T  25912 ag 25911  T

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Target: scaffold0004 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 152 - 233
Target Start/End: Complemental strand, 204362 - 204281
Alignment:
Q  152 cacccttaccttaattctgacgaacgaagttctacgatctctccggttcttcacttggctcttctctctttttctcccccaa 233  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  204362 cacccttaccttaattcagacgaacgaagctctacgatctctccggttcttcacttggctcttcgccctttttctcccccaa 204281  T

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Target: chr8 (Bit Score: 66; Significance: 3e-29; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 110 - 203
Target Start/End: Original strand, 20457990 - 20458083
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaattctgacgaacgaagttctacgatctctccggttcttc 203  Q
    |||||||| ||||||||||||| |||||||||||||||||| ||||||||||||||||  || |||||||| ||||||||||||||||||||||    
T  20457990 aattttcaaaatcatatactcaaaattattgaaggttagtctcacccttaccttaatttagatgaacgaagctctacgatctctccggttcttc 20458083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 134 - 218
Target Start/End: Original strand, 32950921 - 32951005
Alignment:
Q  134 attattgaaggttagtcccacccttaccttaattctgacgaacgaagttctacgatctctccggttcttcacttggctcttctct 218  Q
    ||||||||  ||||| | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  32950921 attattgagagttagcctcacccttaccttaattctgacgaacgaagctctacgatctctccggttcttcacttggctcttctct 32951005  T

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Target: chr8; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 110 - 167
Target Start/End: Original strand, 20463193 - 20463250
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaatt 167  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  20463193 aattttcagaatcatatactcagaattattgaaggttagtctcacccttaccttaatt 20463250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 110 - 164
Target Start/End: Complemental strand, 13660908 - 13660854
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  13660908 aattttcagaatcacatactcagaattattgaaggttagtcccacccttacctta 13660854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 110 - 164
Target Start/End: Complemental strand, 13719551 - 13719497
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  13719551 aattttcagaatcacatactcagaattattgaaggttagtcccacccttacctta 13719497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 19807444 - 19807392
Alignment:
Q  114 ttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaat 166  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  19807444 ttcagaatcacatactcagaattattgaaggttagtcccacccttaccttaat 19807392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 110 - 163
Target Start/End: Complemental strand, 42265563 - 42265510
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctt 163  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  42265563 aattttcagaatcatatactcagacttattaaaggttagtcccacccttacctt 42265510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 110 - 164
Target Start/End: Original strand, 3273888 - 3273942
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    ||||||||||||||||||| || ||||||| ||||||||||||||||||||||||    
T  3273888 aattttcagaatcatatacacataattattaaaggttagtcccacccttacctta 3273942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 110 - 164
Target Start/End: Complemental strand, 22317965 - 22317911
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||    
T  22317965 aattttcagaatcatacacttagaattagtgaaggttagtcccacccttacctta 22317911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 37516608 - 37516661
Alignment:
Q  113 tttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaat 166  Q
    ||||||||||| |||||||  |||||||||||||||||||||||||||||||||    
T  37516608 tttcagaatcacatactcaagattattgaaggttagtcccacccttaccttaat 37516661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 165
Target Start/End: Complemental strand, 1326499 - 1326444
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||||||||||||||| |||||  ||||||||| ||||||||||||||||||||||    
T  1326499 aattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttaa 1326444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 165
Target Start/End: Complemental strand, 16412689 - 16412634
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||||||||||||||| |||||  ||||||||| ||||||||||||||||||||||    
T  16412689 aattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttaa 16412634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 164
Target Start/End: Original strand, 19897302 - 19897356
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||||||||| |||||  ||||||||| |||||||||||||||||||||    
T  19897302 aattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 19897356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 152 - 229
Target Start/End: Original strand, 19989948 - 19990026
Alignment:
Q  152 cacccttaccttaa-ttctgacgaacgaagttctacgatctctccggttcttcacttggctcttctctctttttctccc 229  Q
    |||||||||||||| ||| ||||||| | ||||||| |||| || ||| |||||||||||||||||| |||||||||||    
T  19989948 cacccttaccttaaattcagacgaacaacgttctacaatctttctggtccttcacttggctcttctccctttttctccc 19990026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 164
Target Start/End: Original strand, 24049398 - 24049452
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||||||||| |||||  ||||||||| |||||||||||||||||||||    
T  24049398 aattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 24049452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 164
Target Start/End: Original strand, 32810482 - 32810536
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||||||||| |||||  ||||||||| |||||||||||||||||||||    
T  32810482 aattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 32810536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 5852560 - 5852507
Alignment:
Q  111 attttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    ||||||||||||||| |||||  ||||||||| |||||||||||||||||||||    
T  5852560 attttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 5852507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 11361305 - 11361360
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||||| ||||||||| |||||  ||||||||| ||||||||||||||||||||||    
T  11361305 aatttttagaatcatagactcaagattattgaatgttagtcccacccttaccttaa 11361360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 165
Target Start/End: Complemental strand, 38549187 - 38549132
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||||||||||||||| |||||  ||||||||| |||||||| |||||||||||||    
T  38549187 aattttcagaatcatagactcaagattattgaatgttagtccaacccttaccttaa 38549132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 164
Target Start/End: Complemental strand, 15202360 - 15202306
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||||||||| |||||  ||||||||| ||||||| |||||||||||||    
T  15202360 aattttcagaatcatagactcaagattattgaatgttagtctcacccttacctta 15202306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 164
Target Start/End: Original strand, 20457466 - 20457520
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    ||||||||| |||||| |||||  ||||||||| |||||||||||||||||||||    
T  20457466 aattttcaggatcatagactcaagattattgaatgttagtcccacccttacctta 20457520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 114 - 164
Target Start/End: Complemental strand, 22237100 - 22237050
Alignment:
Q  114 ttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||| ||||| ||||||||||||||||||| ||| ||||||||||||||||    
T  22237100 ttcaaaatcacatactcagaattattgaagattactcccacccttacctta 22237050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 164
Target Start/End: Complemental strand, 24485308 - 24485254
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||||||||| |||||  |||||| || |||||||||||||||||||||    
T  24485308 aattttcagaatcatagactcaagattattaaatgttagtcccacccttacctta 24485254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 164
Target Start/End: Complemental strand, 27471791 - 27471737
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||| ||||||| |||||  ||||||||| |||||||||||||||||||||    
T  27471791 aattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 27471737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 164
Target Start/End: Original strand, 32122516 - 32122570
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||||||||| |||||  ||||||||| |||||| ||||||||||||||    
T  32122516 aattttcagaatcatagactcaagattattgaatgttagttccacccttacctta 32122570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 163
Target Start/End: Original strand, 20404067 - 20404120
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctt 163  Q
    |||| ||||||||||| |||||  ||||||||| ||||||||||||||||||||    
T  20404067 aattatcagaatcatagactcaagattattgaatgttagtcccacccttacctt 20404120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 203
Target Start/End: Complemental strand, 17272649 - 17272598
Alignment:
Q  152 cacccttaccttaattctgacgaacgaagttctacgatctctccggttcttc 203  Q
    |||| |||||||||||  || |||||||| ||||||||||||||||||||||    
T  17272649 cacctttaccttaatttagatgaacgaagctctacgatctctccggttcttc 17272598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 165
Target Start/End: Complemental strand, 45289815 - 45289760
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||||| ||||||||| ||| |  ||||||||| ||||||||||||||||||||||    
T  45289815 aatttttagaatcatagacttaagattattgaatgttagtcccacccttaccttaa 45289760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 164
Target Start/End: Complemental strand, 37609776 - 37609722
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||| ||||||||| |||||  ||||||||| ||||||| |||||||||||||    
T  37609776 aatttttagaatcatagactcaagattattgaatgttagtctcacccttacctta 37609722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 211
Target Start/End: Complemental strand, 22920001 - 22919924
Alignment:
Q  134 attattgaaggttagtcccacccttaccttaattctgacgaacgaagttctacgatctctccggttcttcacttggct 211  Q
    ||||||||  ||||| | ||||||||| |||| || || |||| ||  ||||| ||||||||||||||||||||||||    
T  22920001 attattgagagttagcctcacccttactttaaatcagatgaacaaaactctacaatctctccggttcttcacttggct 22919924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 134 - 218
Target Start/End: Original strand, 3909 - 3993
Alignment:
Q  134 attattgaaggttagtcccacccttaccttaattctgacgaacgaagttctacgatctctccggttcttcacttggctcttctct 218  Q
    ||||||||  ||||| | |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  3909 attattgagagttagcctcacccttaccttaattctgatgaacgaagctctacgatctctccggttcttcacttggctcttctct 3993  T

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Target: scaffold0026 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 115 - 203
Target Start/End: Original strand, 10103 - 10191
Alignment:
Q  115 tcagaatcatatactcagaattattgaaggttagtcccacccttaccttaattctgacgaacgaagttctacgatctctccggttcttc 203  Q
    ||||||||| ||||||| |||||||||||||||||| ||||||||||||||||  || |||||||| ||||||||||||||||||||||    
T  10103 tcagaatcacatactcaaaattattgaaggttagtctcacccttaccttaatttagatgaacgaagctctacgatctctccggttcttc 10191  T

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Target: scaffold0026; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 113 - 203
Target Start/End: Original strand, 22177 - 22267
Alignment:
Q  113 tttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaattctgacgaacgaagttctacgatctctccggttcttc 203  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||  || |||||||| | ||| ||||||||||||||||    
T  22177 tttcagaatcacatactcagaattattgaaggttagtctcacccttaccttaatttagatgaacgaagctttacaatctctccggttcttc 22267  T

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Target: chr5 (Bit Score: 60; Significance: 1e-25; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 134 - 217
Target Start/End: Original strand, 10817834 - 10817917
Alignment:
Q  134 attattgaaggttagtcccacccttaccttaattctgacgaacgaagttctacgatctctccggttcttcacttggctcttctc 217  Q
    |||| |||| ||||||| ||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||    
T  10817834 attactgaatgttagtctcacccttaccttaattcagatgaacgaagctctacgatctctccggttcttcacttggctcttctc 10817917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 134 - 217
Target Start/End: Complemental strand, 22777100 - 22777017
Alignment:
Q  134 attattgaaggttagtcccacccttaccttaattctgacgaacgaagttctacgatctctccggttcttcacttggctcttctc 217  Q
    ||||||||  ||||| | ||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||    
T  22777100 attattgagagttagcctcacccttaccttaattcagatgaacgaagctctacgatctctccggttcttcacttggctcttctc 22777017  T

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Target: chr5; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 110 - 164
Target Start/End: Complemental strand, 21405682 - 21405628
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  21405682 aattttcagaatcatatactcagaattattaaaggttagtctcacccttacctta 21405628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 110 - 164
Target Start/End: Complemental strand, 21914546 - 21914492
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  21914546 aattttcagaattacatactcagaattattgaaggttagtcccacccttacctta 21914492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 110 - 164
Target Start/End: Complemental strand, 10774718 - 10774664
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||    
T  10774718 aattttcagaatcatacacttagaattagtgaaggttagtcccacccttacctta 10774664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 17876201 - 17876251
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttac 160  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  17876201 aattttcagaatcatatactcagaattattgaaggttagtttcacccttac 17876251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 165
Target Start/End: Complemental strand, 2154006 - 2153951
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||||||||||||||| |||||  ||||||||| ||||||||||||||||||||||    
T  2154006 aattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttaa 2153951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 165
Target Start/End: Complemental strand, 17516344 - 17516289
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||||||||||||||| |||||  ||||||||| ||||||||||||||||||||||    
T  17516344 aattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttaa 17516289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 29330761 - 29330816
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||||||||||||||| |||||  ||||||||| ||||||||||||||||||||||    
T  29330761 aattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttaa 29330816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 203
Target Start/End: Complemental strand, 8952071 - 8952002
Alignment:
Q  134 attattgaaggttagtcccacccttaccttaattctgacgaacgaagttctacgatctctccggttcttc 203  Q
    ||||||||  ||||| | ||||||||||||||||  || |||||||| ||||||||||||||||||||||    
T  8952071 attattgagagttagcctcacccttaccttaatttagatgaacgaagctctacgatctctccggttcttc 8952002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 163
Target Start/End: Complemental strand, 20917221 - 20917168
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctt 163  Q
    |||||||||||||||| |||||  ||||||||| ||||||||||||||||||||    
T  20917221 aattttcagaatcatagactcaagattattgaatgttagtcccacccttacctt 20917168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 165
Target Start/End: Complemental strand, 20901377 - 20901325
Alignment:
Q  113 tttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    ||||||||||||| |||||  ||||||||| ||||||||||||||||||||||    
T  20901377 tttcagaatcatagactcaagattattgaatgttagtcccacccttaccttaa 20901325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 164
Target Start/End: Complemental strand, 21554354 - 21554303
Alignment:
Q  113 tttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    ||||||||| |  |||||||||||| ||||||||||||||||||||||||||    
T  21554354 tttcagaattacgtactcagaattactgaaggttagtcccacccttacctta 21554303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 24473862 - 24473917
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||||||||||||||| |||||  ||||||||| ||||||| ||||||||||||||    
T  24473862 aattttcagaatcatagactcaagattattgaatgttagtctcacccttaccttaa 24473917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 161
Target Start/End: Original strand, 26832623 - 26832670
Alignment:
Q  114 ttcagaatcatatactcagaattattgaaggttagtcccacccttacc 161  Q
    |||||||||| ||||| ||||||||||||||||| |||||||||||||    
T  26832623 ttcagaatcacatacttagaattattgaaggttactcccacccttacc 26832670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 164
Target Start/End: Complemental strand, 21557000 - 21556949
Alignment:
Q  113 tttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    ||||||||| | ||| ||||||||| |||||||||||| |||||||||||||    
T  21557000 tttcagaattacatattcagaattactgaaggttagtctcacccttacctta 21556949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 163
Target Start/End: Original strand, 32028813 - 32028866
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctt 163  Q
    |||||||||||||||| |||||  ||||||||| ||||||| || |||||||||    
T  32028813 aattttcagaatcataaactcaagattattgaatgttagtctcatccttacctt 32028866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 168
Target Start/End: Complemental strand, 21398848 - 21398792
Alignment:
Q  112 ttttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaattc 168  Q
    |||||||||| ||| |||||  ||||  ||||||||||||||||||||| |||||||    
T  21398848 ttttcagaattatacactcatgattaaagaaggttagtcccacccttacgttaattc 21398792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 110 - 164
Target Start/End: Complemental strand, 158876 - 158822
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  158876 aatttttagaatcatatactcagaattattgaaggttagtcccacccttacctta 158822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 113 - 164
Target Start/End: Complemental strand, 12166 - 12115
Alignment:
Q  113 tttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  12166 tttcagaatcacatactcagaattattgaaggttagtcccacccttacctta 12115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 114 - 165
Target Start/End: Original strand, 68299 - 68350
Alignment:
Q  114 ttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  68299 ttcagaatcacatactcagaattattgaaggttagtcccacccttaccttaa 68350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 110 - 164
Target Start/End: Original strand, 31106 - 31160
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  31106 aattttcagaattacatactcagaattattgaaggttagtcccacccttacctta 31160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 165
Target Start/End: Complemental strand, 36653 - 36598
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||||||||||||||| |||||  ||||||||| ||||||||||| ||||||||||    
T  36653 aattttcagaatcatagactcaagattattgaatgttagtcccacacttaccttaa 36598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 499057 - 499110
Alignment:
Q  111 attttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  499057 attttcagaatcacatactcaaaattattgaaggttagtcccacccttacctta 499110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 164
Target Start/End: Original strand, 501852 - 501906
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||||||||| |||||  ||||||||| |||||| |||| |||||||||    
T  501852 aattttcagaatcatagactcaagattattgaatgttagtaccacacttacctta 501906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 113 - 164
Target Start/End: Complemental strand, 10813 - 10762
Alignment:
Q  113 tttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  10813 tttcagaatcacatactcataattattgaaggttagtcccacccttacctta 10762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 113 - 164
Target Start/End: Original strand, 55942 - 55993
Alignment:
Q  113 tttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  55942 tttcagaatcacatactcagaattattgaaggttagtctcacccttacctta 55993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0956 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0956
Description:

Target: scaffold0956; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 133 - 211
Target Start/End: Complemental strand, 2125 - 2047
Alignment:
Q  133 aattattgaaggttagtcccacccttaccttaattctgacgaacgaagttctacgatctctccggttcttcacttggct 211  Q
    |||||||||| ||||||| ||||||||||||||||  || |||| ||  ||||| ||||||||||||||||||||||||    
T  2125 aattattgaaagttagtctcacccttaccttaatttagatgaacaaaactctacaatctctccggttcttcacttggct 2047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0819 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 110 - 164
Target Start/End: Original strand, 5364 - 5418
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||    
T  5364 aattttcagaatcatacacttagaattagtgaaggttagtcccacccttacctta 5418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 110 - 164
Target Start/End: Original strand, 8640 - 8694
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||    
T  8640 aattttcagaatcatacacttagaattagtgaaggttagtcccacccttacctta 8694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 164
Target Start/End: Original strand, 5299 - 5349
Alignment:
Q  114 ttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  5299 ttcagaatcacatactcataattattgaaggttagtcccacccttacctta 5349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 164
Target Start/End: Original strand, 12319 - 12369
Alignment:
Q  114 ttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  12319 ttcagaatcacatactcataattattgaaggttagtcccacccttacctta 12369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 110 - 164
Target Start/End: Complemental strand, 35518 - 35464
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||||||||||||||||||||| | ||||||||||||| ||||||||||    
T  35518 aattttcagaatcatatactcagaattaataaaggttagtcccatccttacctta 35464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 164
Target Start/End: Original strand, 1940 - 1990
Alignment:
Q  114 ttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  1940 ttcataatcacatactcagaattattgaaggttagtcccacccttacctta 1990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 3)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 157 - 242
Target Start/End: Complemental strand, 59727 - 59633
Alignment:
Q  157 ttaccttaattctgacgaacgaagttctacgatctctccggttcttcactt---------ggctcttctctctttttctcccccaaaggcttgtt 242  Q
    |||||||||||  || |||||||| ||||||||||||||||||||||||||         |||||||||| ||||||||||||||||||||||||    
T  59727 ttaccttaatttagatgaacgaagctctacgatctctccggttcttcacttggctaccttggctcttctccctttttctcccccaaaggcttgtt 59633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 164
Target Start/End: Original strand, 107263 - 107317
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||||||||| |||||  ||||||||| |||||||||||||||||||||    
T  107263 aattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 107317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 164
Target Start/End: Original strand, 115764 - 115818
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||||||||| |||||  ||||||||| |||||||||||||||||||||    
T  115764 aattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 115818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0429 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0429
Description:

Target: scaffold0429; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 134 - 242
Target Start/End: Complemental strand, 2030 - 1913
Alignment:
Q  134 attattgaaggttagtcccacccttaccttaattctgacgaacgaagttctacgatctctccggttcttcactt---------ggctcttctctcttttt 224  Q
    ||||||||  ||||| | ||||||||||||||||  || |||||||| |||||||||||||| | |||||||||         |||||||||| ||||||    
T  2030 attattgagagttagcctcacccttaccttaatttagatgaacgaagctctacgatctctccagctcttcacttggctaccttggctcttctcccttttt 1931  T
Q  225 ctcccccaaaggcttgtt 242  Q
    ||||||||||||||||||    
T  1930 ctcccccaaaggcttgtt 1913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 6)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 110 - 163
Target Start/End: Complemental strand, 3106 - 3053
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctt 163  Q
    |||||||||||| ||| ||| |||||||||||||||||||||||||||||||||    
T  3106 aattttcagaataatacacttagaattattgaaggttagtcccacccttacctt 3053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 164
Target Start/End: Original strand, 135107 - 135161
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||||||||| || ||  ||||||||| |||||||||||||||||||||    
T  135107 aattttcagaatcatagacccaagattattgaatgttagtcccacccttacctta 135161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 164
Target Start/End: Original strand, 137576 - 137630
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||||||||| || ||  ||||||||| |||||||||||||||||||||    
T  137576 aattttcagaatcatagacccaagattattgaatgttagtcccacccttacctta 137630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 164
Target Start/End: Original strand, 140045 - 140099
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||||||||| || ||  ||||||||| |||||||||||||||||||||    
T  140045 aattttcagaatcatagacccaagattattgaatgttagtcccacccttacctta 140099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 164
Target Start/End: Original strand, 142514 - 142568
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||||||||| || ||  ||||||||| |||||||||||||||||||||    
T  142514 aattttcagaatcatagacccaagattattgaatgttagtcccacccttacctta 142568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 164
Target Start/End: Original strand, 144983 - 145037
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||||||||| || ||  ||||||||| |||||||||||||||||||||    
T  144983 aattttcagaatcatagacccaagattattgaatgttagtcccacccttacctta 145037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 112 - 164
Target Start/End: Complemental strand, 7566 - 7514
Alignment:
Q  112 ttttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||||||||||||| |||||  |||||||||||||||||||||||||    
T  7566 ttttcagaatcatatactcataattaaagaaggttagtcccacccttacctta 7514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1792 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold1792
Description:

Target: scaffold1792; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 1146 - 1201
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||||||||||||||| |||||  ||||||||| ||||||||||||||||||||||    
T  1146 aattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttaa 1201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0711 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0711
Description:

Target: scaffold0711; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 165
Target Start/End: Complemental strand, 6951 - 6896
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||||||||||||||| |||||  ||||||||| ||||||||||||||||||||||    
T  6951 aattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttaa 6896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0577 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 113 - 164
Target Start/End: Original strand, 9060 - 9111
Alignment:
Q  113 tttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    ||||||||| | ||||||||||||| ||||||||||||||||||||||||||    
T  9060 tttcagaattacatactcagaattactgaaggttagtcccacccttacctta 9111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 18725 - 18780
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||||||||||||||| |||||  ||||||||| ||||||||||||||||||||||    
T  18725 aattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttaa 18780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 165
Target Start/End: Complemental strand, 22754 - 22699
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||||||||||||||| |||||  ||||||||| ||||||||||||||||||||||    
T  22754 aattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttaa 22699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 161
Target Start/End: Complemental strand, 20578 - 20527
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacc 161  Q
    |||||||||||||||| |||||  ||||||||| ||||||||||||||||||    
T  20578 aattttcagaatcatagactcaagattattgaatgttagtcccacccttacc 20527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 3608 - 3663
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||||||||||||||| |||||  ||||||||| ||||||||||||||||||||||    
T  3608 aattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttaa 3663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 34284 - 34339
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||||||||||||||| |||||  ||||||||| ||||||||||||||||||||||    
T  34284 aattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttaa 34339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 20632 - 20687
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||||||||||||||| |||||  ||||||||| ||||||||||||||||||||||    
T  20632 aattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttaa 20687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 43526 - 43570
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccac 154  Q
    |||||||||||||||||||| |  ||||||||| |||||||||||    
T  43526 aattttcagaatcatatacttaagattattgaatgttagtcccac 43570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 164
Target Start/End: Original strand, 7239 - 7293
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||||||||| |||||  ||||||||| |||||||||||||||||||||    
T  7239 aattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 7293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 164
Target Start/End: Complemental strand, 3947 - 3893
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||||| | ||||||| |||||||||||||||||||| |||||||||||    
T  3947 aattttcagaattacatactcataattattgaaggttagtccctcccttacctta 3893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 164
Target Start/End: Complemental strand, 13941 - 13887
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||| ||||| | ||||||| |||||||||||||| |||||||||||||||||    
T  13941 aatttttagaattacatactcacaattattgaaggttggtcccacccttacctta 13887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 164
Target Start/End: Complemental strand, 2972 - 2918
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||||||||| |||||  ||||||||| |||||||||||||||||||||    
T  2972 aattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 2918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 164
Target Start/End: Complemental strand, 135558 - 135504
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||||| ||| ||| ||||||| ||||||||||||||||||||||||||    
T  135558 aattttcagaattatacacttagaattagtgaaggttagtcccacccttacctta 135504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0780 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0780
Description:

Target: scaffold0780; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 2522 - 2469
Alignment:
Q  113 tttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaat 166  Q
    ||||||| ||| |||||||  |||||||||||||||||||||||||||||||||    
T  2522 tttcagattcacatactcaagattattgaaggttagtcccacccttaccttaat 2469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 38; Significance: 0.000000000001; HSPs: 3)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 163
Target Start/End: Original strand, 185057 - 185110
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctt 163  Q
    |||||||||||||||| |||||  ||||||||| ||||||||||||||||||||    
T  185057 aattttcagaatcatagactcaagattattgaatgttagtcccacccttacctt 185110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 165
Target Start/End: Complemental strand, 118806 - 118754
Alignment:
Q  113 tttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    ||||||| ||| |||||||  ||||||||||||||||||||||||||||||||    
T  118806 tttcagattcacatactcaagattattgaaggttagtcccacccttaccttaa 118754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 133 - 211
Target Start/End: Complemental strand, 174138 - 174060
Alignment:
Q  133 aattattgaaggttagtcccacccttaccttaattctgacgaacgaagttctacgatctctccggttcttcacttggct 211  Q
    |||||||||| |||||   ||||||||||||||||  || |||| ||| ||||| |||||| |||||||||||||||||    
T  174138 aattattgaaagttagcttcacccttaccttaatttagatgaacaaagctctacaatctcttcggttcttcacttggct 174060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0747 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0747
Description:

Target: scaffold0747; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 1496 - 1551
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||||||| ||||||| |||||  ||||||||| ||||||||||||||||||||||    
T  1496 aattttcaaaatcatagactcaagattattgaatgttagtcccacccttaccttaa 1551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0716 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 5482 - 5537
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||||||||||||||| |||||  ||||||||| |||| |||||||||||||||||    
T  5482 aattttcagaatcatagactcaagattattgaatgttattcccacccttaccttaa 5537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 165
Target Start/End: Complemental strand, 90 - 35
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||||||||||||| | |||||  ||||||||| ||||||||||||||||||||||    
T  90 aattttcagaatcacagactcaagattattgaatgttagtcccacccttaccttaa 35  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 6109 - 6164
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||||||||||||||| ||||| |||||||||| ||||||| |||| |||||||||    
T  6109 aattttcagaatcatagactcaaaattattgaatgttagtctcacctttaccttaa 6164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 165
Target Start/End: Complemental strand, 10714 - 10659
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||||||||||||||| |||||  ||||||||| ||||||| ||||||||||||||    
T  10714 aattttcagaatcatagactcaagattattgaatgttagtctcacccttaccttaa 10659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 161
Target Start/End: Original strand, 13639 - 13686
Alignment:
Q  114 ttcagaatcatatactcagaattattgaaggttagtcccacccttacc 161  Q
    |||||||||| ||||| ||||||||||||||||| |||||||||||||    
T  13639 ttcagaatcacatacttagaattattgaaggttactcccacccttacc 13686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 167
Target Start/End: Original strand, 32048 - 32103
Alignment:
Q  112 ttttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaatt 167  Q
    ||||||||||||||||||||  ||||  ||||||||| ||||||||||||||||||    
T  32048 ttttcagaatcatatactcatgattaaagaaggttagccccacccttaccttaatt 32103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 164
Target Start/End: Original strand, 31929 - 31981
Alignment:
Q  112 ttttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    ||||||||||||||||||||  ||||  || |||||||| |||||||||||||    
T  31929 ttttcagaatcatatactcatgattaaagatggttagtctcacccttacctta 31981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 36; Significance: 0.00000000002; HSPs: 3)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 10772 - 10827
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||||||||||||||| |||||  ||||||||| ||||||| ||||||||||||||    
T  10772 aattttcagaatcatagactcaagattattgaatgttagtctcacccttaccttaa 10827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 166
Target Start/End: Original strand, 27996 - 28031
Alignment:
Q  131 agaattattgaaggttagtcccacccttaccttaat 166  Q
    |||||||||||||| |||||||||||||||||||||    
T  27996 agaattattgaaggctagtcccacccttaccttaat 28031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 166
Target Start/End: Original strand, 42854 - 42889
Alignment:
Q  131 agaattattgaaggttagtcccacccttaccttaat 166  Q
    |||||||||||||| |||||||||||||||||||||    
T  42854 agaattattgaaggctagtcccacccttaccttaat 42889  T

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Target: scaffold0562 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0562
Description:

Target: scaffold0562; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 152 - 229
Target Start/End: Complemental strand, 2880 - 2802
Alignment:
Q  152 cacccttaccttaatt-ctgacgaacgaagttctacgatctctccggttcttcacttggctcttctctctttttctccc 229  Q
    |||||||||||||||| | ||||||| | |||| || || |||||| | |||||||||||||||||| |||||||||||    
T  2880 cacccttaccttaatttcagacgaacaacgttcaacaatttctccgatccttcacttggctcttctccctttttctccc 2802  T

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Target: scaffold0308 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 164
Target Start/End: Original strand, 13438 - 13492
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||||||||||||| ||||| ||| |||||||||| || ||||||||||    
T  13438 aattttcagaatcatatactgagaatgattaaaggttagtcacatccttacctta 13492  T

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Target: scaffold0251 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 164
Target Start/End: Complemental strand, 20140 - 20086
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||||| ||| ||| ||||||| |||||||||||||| |||||||||||    
T  20140 aattttcagaattatacacttagaattagtgaaggttagtcccgcccttacctta 20086  T

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Target: scaffold0053 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 109 - 163
Target Start/End: Original strand, 60723 - 60777
Alignment:
Q  109 aaattttcagaatcatatactcagaattattgaaggttagtcccacccttacctt 163  Q
    |||||||||||| |||| |||||  ||||||||| ||||||||||||||||||||    
T  60723 aaattttcagaaacatagactcaagattattgaatgttagtcccacccttacctt 60777  T

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Target: scaffold0031 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 164
Target Start/End: Complemental strand, 56274 - 56220
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||||||||| || ||  ||||||||| |||||||||||||||||||||    
T  56274 aattttcagaatcatagacccaagattattgaatgttagtcccacccttacctta 56220  T

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Target: scaffold0411 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 164
Target Start/End: Complemental strand, 13450 - 13417
Alignment:
Q  131 agaattattgaaggttagtcccacccttacctta 164  Q
    ||||||||||||||||||||||||||||||||||    
T  13450 agaattattgaaggttagtcccacccttacctta 13417  T

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Target: scaffold0042 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 114 - 163
Target Start/End: Complemental strand, 43218 - 43169
Alignment:
Q  114 ttcagaatcatatactcagaattattgaaggttagtcccacccttacctt 163  Q
    |||||||||||| |||||  ||||||||| ||||||||||||||||||||    
T  43218 ttcagaatcatagactcaagattattgaatgttagtcccacccttacctt 43169  T

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Target: scaffold0848 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0848
Description:

Target: scaffold0848; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 166
Target Start/End: Complemental strand, 2075 - 2019
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaat 166  Q
    |||||||| ||||||| ||| ||||||| ||||||||| ||||||||||| ||||||    
T  2075 aattttcaaaatcatacacttagaattagtgaaggttaatcccacccttagcttaat 2019  T

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Target: scaffold1296 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1296
Description:

Target: scaffold1296; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 2042 - 2097
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||||||||||||||| ||| |  ||||||||| ||||||| ||||||||||||||    
T  2042 aattttcagaatcatagacttaagattattgaatgttagtctcacccttaccttaa 2097  T

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Target: scaffold0535 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 7572 - 7627
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||| ||||||||||| |||||  ||||||||| ||||||| ||||||||||||||    
T  7572 aattctcagaatcatagactcaagattattgaatgttagtctcacccttaccttaa 7627  T

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Target: scaffold0529 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 164
Target Start/End: Original strand, 4166 - 4217
Alignment:
Q  113 tttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    ||||||||||| ||||| |||| ||||||||||||||| |||| ||||||||    
T  4166 tttcagaatcacatacttagaagtattgaaggttagtctcacctttacctta 4217  T

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Target: scaffold0317 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 165
Target Start/End: Complemental strand, 6311 - 6256
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||||||||||||||| |||||  ||||||||| ||||||| ||||||| ||||||    
T  6311 aattttcagaatcatagactcaagattattgaatgttagtctcaccctttccttaa 6256  T

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Target: scaffold0037 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 81565 - 81620
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||||| ||||||||  | | ||||||| |||||||||||||||||||||||||||    
T  81565 aatttttagaatcatccatttagaattagtgaaggttagtcccacccttaccttaa 81620  T

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Target: scaffold0023 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 165
Target Start/End: Complemental strand, 16814 - 16759
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||||| ||||||||| |||||  ||||||||| ||||||| ||||||||||||||    
T  16814 aatttttagaatcatagactcaagattattgaatgttagtctcacccttaccttaa 16759  T

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Target: scaffold0019 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 21960 - 22015
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaa 165  Q
    |||||||| ||||||| |||||  ||||||||| ||||||| ||||||||||||||    
T  21960 aattttcacaatcatagactcaagattattgaatgttagtctcacccttaccttaa 22015  T

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Target: scaffold0019; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 163
Target Start/End: Original strand, 30094 - 30122
Alignment:
Q  135 ttattgaaggttagtcccacccttacctt 163  Q
    |||||||||||||||||||||||||||||    
T  30094 ttattgaaggttagtcccacccttacctt 30122  T

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Target: scaffold0278 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 164
Target Start/End: Original strand, 8720 - 8774
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||||||||| |||||  ||||||||| |||||| ||||||||| ||||    
T  8720 aattttcagaatcatacactcaagattattgaatgttagttccacccttaactta 8774  T

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Target: scaffold0117 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 211
Target Start/End: Original strand, 26072 - 26130
Alignment:
Q  153 acccttaccttaattctgacgaacgaagttctacgatctctccggttcttcacttggct 211  Q
    |||||||||||||||  || |||| ||| ||||| ||||||||||||||||| ||||||    
T  26072 acccttaccttaatttagatgaacaaagctctacaatctctccggttcttcaattggct 26130  T

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Target: scaffold0146 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 166
Target Start/End: Original strand, 22983 - 23040
Alignment:
Q  110 aattttcagaatcatatactcaga-attattgaaggttagtcccacccttaccttaat 166  Q
    |||||| ||||||||| ||| | | ||||||||| |||||||||||||||||||||||    
T  22983 aatttttagaatcatagacttaaagattattgaatgttagtcccacccttaccttaat 23040  T

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Target: scaffold1939 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1939
Description:

Target: scaffold1939; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 164
Target Start/End: Original strand, 127 - 179
Alignment:
Q  112 ttttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    ||||||||| |||||||| |  ||||  |||||||||||||||||||||||||    
T  127 ttttcagaaccatatactaatgattaaagaaggttagtcccacccttacctta 179  T

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Target: scaffold0546 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 166
Target Start/End: Original strand, 7931 - 7987
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaat 166  Q
    |||||| ||||||||| ||| |  ||||||||| ||||||||||||||||| |||||    
T  7931 aatttttagaatcatagacttaagattattgaatgttagtcccacccttactttaat 7987  T

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Target: scaffold0337 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 164
Target Start/End: Original strand, 3204 - 3256
Alignment:
Q  112 ttttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||| ||| |||||||||  ||||  |||||||||||||||||||||||||    
T  3204 ttttcataattatatactcatgattaaagaaggttagtcccacccttacctta 3256  T

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Target: scaffold0292 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 163
Target Start/End: Original strand, 7574 - 7606
Alignment:
Q  131 agaattattgaaggttagtcccacccttacctt 163  Q
    |||||||||||||| ||||||||||||||||||    
T  7574 agaattattgaaggctagtcccacccttacctt 7606  T

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Target: scaffold0205 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 163
Target Start/End: Original strand, 30673 - 30705
Alignment:
Q  131 agaattattgaaggttagtcccacccttacctt 163  Q
    |||||||||||||||||||| ||||||||||||    
T  30673 agaattattgaaggttagtctcacccttacctt 30705  T

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Target: scaffold0125 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 164
Target Start/End: Original strand, 28551 - 28603
Alignment:
Q  112 ttttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||| |||||||||  ||||  ||||||||||||||| |||||||||    
T  28551 ttttcagaattatatactcatgattaaggaaggttagtcccactcttacctta 28603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 166
Target Start/End: Complemental strand, 5376 - 5320
Alignment:
Q  110 aattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttaat 166  Q
    |||||| ||||||||| ||| |  ||||||||| ||||||||||||||||| |||||    
T  5376 aatttttagaatcatagacttaagattattgaatgttagtcccacccttactttaat 5320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 164
Target Start/End: Complemental strand, 38494 - 38442
Alignment:
Q  112 ttttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||| |||||||||  ||||  ||||||||||| |||||||||||||    
T  38494 ttttcagaattatatactcatgattaaagaaggttagtcacacccttacctta 38442  T

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Target: scaffold0058 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 164
Target Start/End: Complemental strand, 59708 - 59656
Alignment:
Q  112 ttttcagaatcatatactcagaattattgaaggttagtcccacccttacctta 164  Q
    |||||||||| |||||||||  ||||  ||||||||| |||||||||||||||    
T  59708 ttttcagaattatatactcatgattaaagaaggttagacccacccttacctta 59656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 163
Target Start/End: Original strand, 120973 - 121005
Alignment:
Q  131 agaattattgaaggttagtcccacccttacctt 163  Q
    |||||||||||||| ||||||||||||||||||    
T  120973 agaattattgaaggctagtcccacccttacctt 121005  T

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Target: scaffold0018 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 163
Target Start/End: Original strand, 21714 - 21746
Alignment:
Q  131 agaattattgaaggttagtcccacccttacctt 163  Q
    |||||||||||||| ||||||||||||||||||    
T  21714 agaattattgaaggctagtcccacccttacctt 21746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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