View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17431_high_9 (Length: 325)

Name: NF17431_high_9
Description: NF17431
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17431_high_9
NF17431_high_9
[»] chr7 (1 HSPs)
chr7 (18-312)||(45695965-45696259)


Alignment Details
Target: chr7 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 18 - 312
Target Start/End: Original strand, 45695965 - 45696259
Alignment:
Q  18 agtactgtcactatgtgacaaaccggtccctatttaataacactaataattgacgacaaaagtagataaaatcaatannnnnnncgtgaccaaattcctt 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||    
T  45695965 agtactgtcactatgtgacaaaccggtccctatttaataacactaataattgacgacaaaagtagataaaatcaatatttttt-cgtgaccaaattcctt 45696063  T
Q  118 gttacttgttagcaaagtactttacttcaaaattaaattaagctagtactatacatcatcatatcatgcacaaatattgctaagtaaagcaaaaacttga 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45696064 gttacttgttagcaaagtactttacttcaaaattaaattaagctagtactatacatcatcatatcatgcacaaatattgctaagtaaagcaaaaacttga 45696163  T
Q  218 agataaaataaagattctgttttgcttaaagtag-aaatatacacgagttctatttgtttctatggaccacatacaataatagtgattctcggttc 312  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45696164 agataaaataaagattctgttttgcttaaagtagaaaatatacacgagttctatttgtttctatggaccacatacaataatagtgattctcggttc 45696259  T

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