View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17432_high_9 (Length: 442)
Name: NF17432_high_9
Description: NF17432
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17432_high_9 |
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Alignment Details
Target: chr6 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 100 - 347
Target Start/End: Original strand, 32377924 - 32378168
Alignment:
| Q |
100 |
cgtttctttatgtggacacnnnnnnntcatgggaaaaaatgttggcgggttatttggtaaagaagtggtattgggatcaatgcaatttttctatggtttc |
199 |
Q |
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| T |
32377924 |
cgtttctttatgtggacacaaaaaaatcatgggaaaaaatgttggcgggttatttggtaaagaagtggtattgggatcaatgcaatttttctatggtttc |
32378023 |
T |
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| Q |
200 |
aaatcttcaaaggaataactcaataaaaaatatatatatttaaaggaagttttgttaggtgtgagtccgtgacaatagtgtcaaaaccaaatttatttat |
299 |
Q |
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|||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
32378024 |
aaatcttcaaaggaataactcaataaaaaaaa---atatttaaaggaagttttgttaggtgtgagtccgtgacaatagtgtcaaaaccaaattgatttat |
32378120 |
T |
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| Q |
300 |
aatttctgtataaagttgaatttatttaattcatttcttaaaaaagag |
347 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32378121 |
aatttctgtataaagttgaatttatttaattcatttcttaaaaaagag |
32378168 |
T |
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