View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17432_low_34 (Length: 219)
Name: NF17432_low_34
Description: NF17432
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17432_low_34 |
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Alignment Details
Target: chr2 (Bit Score: 113; Significance: 2e-57; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 18 - 201
Target Start/End: Complemental strand, 13847049 - 13846864
Alignment:
| Q |
18 |
aatgcatatcattatatcattacgacaagaatacataatactattgagagcaagtttattctatttttagaggtggagagcaag--nnnnnnnnnnnnnn |
115 |
Q |
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| T |
13847049 |
aatgcatatcattatatcattacgacaagaatacataatactattgagagcaagtttattctatttttagaggtggagggcaagtttttttttttttttt |
13846950 |
T |
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| Q |
116 |
ggtacgggtagagcaaggtaaaatgatgagaaatacatacacttaaattctgttagggaaataagaactaacaaatattagaacac |
201 |
Q |
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| T |
13846949 |
ggtaagggtagagcaaggtaaaatgatgagaaatacatgcacttaaattctgttggggaaatgagaactaacaaatattagaacac |
13846864 |
T |
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