View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17434_low_36 (Length: 323)

Name: NF17434_low_36
Description: NF17434
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17434_low_36
NF17434_low_36
[»] chr4 (37 HSPs)
chr4 (74-306)||(55084483-55084715)
chr4 (196-304)||(47800581-47800689)
chr4 (152-304)||(17883975-17884134)
chr4 (177-306)||(4798568-4798697)
chr4 (240-306)||(42121490-42121555)
chr4 (240-299)||(11158366-11158425)
chr4 (240-303)||(35571636-35571699)
chr4 (240-299)||(49219141-49219200)
chr4 (240-306)||(2996575-2996641)
chr4 (240-301)||(17822872-17822933)
chr4 (240-305)||(24929495-24929560)
chr4 (240-297)||(30207582-30207639)
chr4 (240-303)||(1706624-1706687)
chr4 (156-235)||(26520309-26520388)
chr4 (245-304)||(53673662-53673721)
chr4 (248-306)||(1137722-1137780)
chr4 (259-297)||(1313129-1313167)
chr4 (263-297)||(1313177-1313211)
chr4 (240-306)||(11264303-11264369)
chr4 (241-299)||(11802537-11802595)
chr4 (256-306)||(29467626-29467676)
chr4 (241-299)||(33534178-33534236)
chr4 (240-306)||(52746842-52746908)
chr4 (240-282)||(56480350-56480392)
chr4 (238-287)||(437453-437502)
chr4 (240-289)||(1404419-1404468)
chr4 (243-303)||(2703031-2703092)
chr4 (141-202)||(2987085-2987146)
chr4 (265-306)||(22236107-22236148)
chr4 (247-304)||(47145971-47146028)
chr4 (240-289)||(53294133-53294182)
chr4 (246-306)||(1312849-1312909)
chr4 (257-297)||(14011253-14011293)
chr4 (240-304)||(29263372-29263436)
chr4 (257-289)||(30377434-30377466)
chr4 (257-289)||(32421278-32421310)
chr4 (248-288)||(44249295-44249335)
[»] chr3 (49 HSPs)
chr3 (176-307)||(2128259-2128390)
chr3 (168-306)||(20669102-20669240)
chr3 (240-303)||(21367669-21367732)
chr3 (243-306)||(33883752-33883815)
chr3 (152-306)||(40665336-40665497)
chr3 (240-306)||(43115058-43115124)
chr3 (240-301)||(28622006-28622067)
chr3 (142-305)||(30573917-30574085)
chr3 (190-289)||(42808924-42809023)
chr3 (247-289)||(34924557-34924599)
chr3 (256-306)||(36139896-36139946)
chr3 (240-306)||(36887506-36887572)
chr3 (265-306)||(3044261-3044302)
chr3 (265-306)||(25925769-25925810)
chr3 (241-306)||(48048984-48049049)
chr3 (144-196)||(1508710-1508762)
chr3 (225-289)||(4013498-4013562)
chr3 (266-306)||(36101596-36101636)
chr3 (242-306)||(50952337-50952401)
chr3 (240-307)||(53952047-53952117)
chr3 (257-300)||(8007707-8007750)
chr3 (240-306)||(1816585-1816651)
chr3 (240-306)||(22214661-22214727)
chr3 (245-299)||(25170815-25170868)
chr3 (268-306)||(34954112-34954150)
chr3 (240-306)||(39602212-39602278)
chr3 (240-306)||(41644447-41644513)
chr3 (255-301)||(46031007-46031053)
chr3 (168-202)||(54194442-54194476)
chr3 (176-245)||(139916-139985)
chr3 (240-305)||(237399-237464)
chr3 (240-285)||(2825149-2825194)
chr3 (265-306)||(21574517-21574558)
chr3 (245-306)||(24785212-24785273)
chr3 (247-304)||(25453863-25453920)
chr3 (257-306)||(31010421-31010470)
chr3 (185-238)||(36189506-36189559)
chr3 (240-289)||(37138292-37138341)
chr3 (240-289)||(41633362-41633411)
chr3 (266-306)||(5166351-5166391)
chr3 (270-306)||(5391911-5391947)
chr3 (247-299)||(16790387-16790439)
chr3 (243-299)||(32064444-32064500)
chr3 (247-299)||(34414793-34414845)
chr3 (255-307)||(38971275-38971327)
chr3 (270-306)||(39723242-39723278)
chr3 (266-306)||(45432941-45432981)
chr3 (240-304)||(47319275-47319339)
chr3 (242-306)||(53848065-53848129)
[»] chr1 (50 HSPs)
chr1 (152-305)||(10744215-10744368)
chr1 (240-306)||(25479583-25479649)
chr1 (238-306)||(30257683-30257751)
chr1 (255-306)||(6292510-6292561)
chr1 (247-306)||(10199410-10199469)
chr1 (144-202)||(5894276-5894334)
chr1 (260-306)||(31517742-31517788)
chr1 (266-306)||(37593686-37593726)
chr1 (191-306)||(27140431-27140546)
chr1 (183-289)||(49888705-49888818)
chr1 (240-306)||(37842357-37842423)
chr1 (240-305)||(23902070-23902135)
chr1 (252-289)||(33975584-33975621)
chr1 (230-303)||(38503470-38503543)
chr1 (245-298)||(41195203-41195256)
chr1 (257-306)||(46252684-46252733)
chr1 (225-289)||(13975634-13975698)
chr1 (240-304)||(35351041-35351105)
chr1 (245-301)||(45975697-45975753)
chr1 (240-306)||(7472313-7472380)
chr1 (263-306)||(11639418-11639461)
chr1 (265-304)||(15361067-15361106)
chr1 (152-303)||(27146260-27146411)
chr1 (245-304)||(28077073-28077132)
chr1 (240-299)||(31294530-31294589)
chr1 (240-306)||(1565537-1565603)
chr1 (240-306)||(7137000-7137066)
chr1 (240-302)||(7218080-7218142)
chr1 (252-290)||(13363442-13363480)
chr1 (173-235)||(23544720-23544782)
chr1 (244-306)||(24460409-24460471)
chr1 (152-230)||(33186173-33186251)
chr1 (240-306)||(34290238-34290304)
chr1 (240-306)||(37240844-37240910)
chr1 (245-303)||(51695500-51695558)
chr1 (257-306)||(4622112-4622161)
chr1 (257-306)||(8016276-8016325)
chr1 (240-305)||(12564877-12564942)
chr1 (257-306)||(28689454-28689503)
chr1 (240-289)||(34952217-34952266)
chr1 (241-286)||(37241844-37241889)
chr1 (240-305)||(39270428-39270493)
chr1 (240-305)||(39347970-39348035)
chr1 (240-289)||(40394905-40394953)
chr1 (242-306)||(4699617-4699681)
chr1 (245-289)||(4700085-4700129)
chr1 (267-299)||(15799730-15799762)
chr1 (152-188)||(24552477-24552513)
chr1 (152-200)||(47498958-47499006)
chr1 (240-300)||(51929783-51929843)
[»] chr8 (47 HSPs)
chr8 (152-306)||(37353251-37353411)
chr8 (152-300)||(10114397-10114551)
chr8 (265-306)||(20672777-20672818)
chr8 (240-301)||(27028833-27028894)
chr8 (175-302)||(21653011-21653145)
chr8 (168-307)||(37444421-37444562)
chr8 (138-201)||(2833444-2833507)
chr8 (240-295)||(7714244-7714299)
chr8 (240-303)||(9956819-9956882)
chr8 (168-263)||(26215419-26215514)
chr8 (240-299)||(31862495-31862554)
chr8 (247-306)||(42215084-42215143)
chr8 (240-298)||(26473762-26473820)
chr8 (244-305)||(2458569-2458630)
chr8 (152-201)||(2840266-2840315)
chr8 (152-201)||(2844953-2845002)
chr8 (247-300)||(11494155-11494208)
chr8 (245-306)||(30389106-30389167)
chr8 (240-308)||(8062331-8062399)
chr8 (247-303)||(33714241-33714297)
chr8 (152-200)||(40859833-40859881)
chr8 (240-303)||(1930037-1930100)
chr8 (247-306)||(10075553-10075612)
chr8 (244-307)||(12851182-12851245)
chr8 (247-306)||(28784798-28784856)
chr8 (258-305)||(43413028-43413074)
chr8 (233-303)||(1113053-1113123)
chr8 (264-306)||(9700027-9700069)
chr8 (257-307)||(11493984-11494034)
chr8 (240-306)||(13459647-13459713)
chr8 (176-218)||(34522153-34522195)
chr8 (223-301)||(35643995-35644073)
chr8 (265-303)||(42215311-42215349)
chr8 (245-306)||(4055618-4055679)
chr8 (241-306)||(7918448-7918513)
chr8 (240-301)||(8062526-8062587)
chr8 (245-306)||(10383892-10383953)
chr8 (245-306)||(43052728-43052789)
chr8 (240-281)||(43709275-43709316)
chr8 (241-289)||(4762512-4762560)
chr8 (146-238)||(7646107-7646199)
chr8 (240-300)||(10120758-10120818)
chr8 (152-236)||(14482110-14482193)
chr8 (240-288)||(27754406-27754454)
chr8 (257-305)||(39866737-39866785)
chr8 (258-306)||(41606905-41606953)
chr8 (245-289)||(44236842-44236886)
[»] chr5 (41 HSPs)
chr5 (140-308)||(10771888-10772053)
chr5 (152-303)||(39105371-39105529)
chr5 (173-303)||(4014429-4014566)
chr5 (240-306)||(17258885-17258951)
chr5 (173-249)||(465882-465958)
chr5 (244-306)||(37611217-37611279)
chr5 (244-306)||(37787947-37788009)
chr5 (152-303)||(9202753-9202911)
chr5 (152-307)||(42582819-42582981)
chr5 (190-305)||(11615453-11615568)
chr5 (153-243)||(1465091-1465181)
chr5 (240-306)||(17368678-17368744)
chr5 (240-308)||(912647-912716)
chr5 (265-306)||(14331394-14331435)
chr5 (245-306)||(36638754-36638815)
chr5 (153-202)||(39248008-39248057)
chr5 (247-303)||(7984978-7985034)
chr5 (240-304)||(15308997-15309061)
chr5 (140-235)||(5963362-5963457)
chr5 (238-297)||(36318774-36318833)
chr5 (240-307)||(40205075-40205142)
chr5 (139-202)||(42573892-42573955)
chr5 (247-297)||(10363760-10363810)
chr5 (240-306)||(11707057-11707123)
chr5 (268-306)||(12467163-12467201)
chr5 (266-304)||(12521556-12521594)
chr5 (258-304)||(28413288-28413334)
chr5 (248-298)||(38104867-38104917)
chr5 (265-306)||(4619734-4619775)
chr5 (240-289)||(6593301-6593350)
chr5 (240-301)||(7907883-7907944)
chr5 (265-306)||(10125720-10125761)
chr5 (240-289)||(10272450-10272499)
chr5 (258-303)||(34160751-34160796)
chr5 (265-306)||(37526201-37526242)
chr5 (265-306)||(37690638-37690679)
chr5 (240-301)||(41981872-41981933)
chr5 (152-196)||(3735620-3735664)
chr5 (178-238)||(37112335-37112395)
chr5 (240-304)||(37588364-37588428)
chr5 (274-306)||(41225088-41225120)
[»] chr2 (44 HSPs)
chr2 (168-289)||(32364750-32364871)
chr2 (240-303)||(9174817-9174880)
chr2 (240-306)||(33942152-33942218)
chr2 (245-303)||(35379021-35379079)
chr2 (173-307)||(42907287-42907430)
chr2 (245-306)||(19333327-19333388)
chr2 (210-305)||(12313176-12313278)
chr2 (240-307)||(22681186-22681253)
chr2 (240-306)||(5826219-5826285)
chr2 (173-243)||(36114595-36114665)
chr2 (210-303)||(16451090-16451183)
chr2 (245-298)||(33319822-33319875)
chr2 (240-289)||(43985022-43985071)
chr2 (247-304)||(44443330-44443387)
chr2 (240-304)||(1625902-1625966)
chr2 (239-307)||(27663378-27663446)
chr2 (191-306)||(29316777-29316899)
chr2 (263-306)||(1647261-1647304)
chr2 (176-235)||(11344364-11344423)
chr2 (247-306)||(34652038-34652097)
chr2 (240-303)||(40279269-40279332)
chr2 (240-303)||(40279339-40279402)
chr2 (257-303)||(7928304-7928350)
chr2 (244-302)||(33941915-33941973)
chr2 (168-238)||(36114342-36114412)
chr2 (243-305)||(38078413-38078475)
chr2 (240-306)||(39236497-39236563)
chr2 (152-234)||(39567810-39567892)
chr2 (265-303)||(43511112-43511150)
chr2 (263-305)||(43529861-43529903)
chr2 (240-306)||(43911001-43911067)
chr2 (257-306)||(5781688-5781737)
chr2 (266-303)||(9395158-9395195)
chr2 (257-306)||(10198482-10198531)
chr2 (258-299)||(16503372-16503413)
chr2 (243-307)||(24097813-24097878)
chr2 (240-289)||(32634337-32634386)
chr2 (257-306)||(41809247-41809296)
chr2 (244-289)||(45229517-45229562)
chr2 (258-306)||(5133792-5133840)
chr2 (266-306)||(8820294-8820334)
chr2 (240-304)||(10884525-10884589)
chr2 (223-283)||(41216710-41216770)
chr2 (240-288)||(44644280-44644328)
[»] chr6 (26 HSPs)
chr6 (142-289)||(264268-264414)
chr6 (245-306)||(6647394-6647455)
chr6 (168-303)||(9093561-9093703)
chr6 (240-306)||(4420645-4420711)
chr6 (240-306)||(20368182-20368248)
chr6 (246-306)||(3528811-3528871)
chr6 (176-308)||(32386106-32386238)
chr6 (240-306)||(2112202-2112268)
chr6 (266-307)||(28641750-28641791)
chr6 (240-285)||(31812036-31812081)
chr6 (266-306)||(13908491-13908531)
chr6 (246-289)||(1497989-1498032)
chr6 (263-297)||(323597-323631)
chr6 (272-306)||(821833-821867)
chr6 (240-306)||(31624092-31624158)
chr6 (240-289)||(837235-837284)
chr6 (244-289)||(26694884-26694929)
chr6 (240-289)||(31671093-31671142)
chr6 (154-235)||(32206100-32206181)
chr6 (270-306)||(696634-696670)
chr6 (244-288)||(2205610-2205654)
chr6 (266-306)||(6536975-6537015)
chr6 (266-306)||(9027606-9027646)
chr6 (255-303)||(9912196-9912244)
chr6 (240-300)||(34430469-34430529)
chr6 (152-200)||(35069459-35069507)
[»] chr7 (30 HSPs)
chr7 (245-305)||(39907810-39907870)
chr7 (240-305)||(15075088-15075153)
chr7 (240-289)||(20881655-20881704)
chr7 (240-307)||(38010716-38010783)
chr7 (240-303)||(39967922-39967985)
chr7 (239-286)||(48917368-48917415)
chr7 (248-290)||(2012633-2012675)
chr7 (240-306)||(44151482-44151548)
chr7 (152-202)||(44777095-44777145)
chr7 (245-302)||(529382-529439)
chr7 (245-306)||(7244687-7244748)
chr7 (245-298)||(22283754-22283807)
chr7 (247-306)||(6552294-6552353)
chr7 (245-300)||(27378836-27378891)
chr7 (240-306)||(3610742-3610808)
chr7 (240-306)||(24363603-24363669)
chr7 (240-282)||(30456476-30456518)
chr7 (240-305)||(30553343-30553409)
chr7 (240-289)||(7521274-7521323)
chr7 (152-301)||(26935564-26935712)
chr7 (240-289)||(27863744-27863793)
chr7 (184-245)||(28613604-28613665)
chr7 (257-306)||(35007617-35007665)
chr7 (240-304)||(2825235-2825299)
chr7 (245-289)||(9050642-9050686)
chr7 (270-306)||(11048059-11048095)
chr7 (152-196)||(21568757-21568801)
chr7 (244-284)||(33552874-33552914)
chr7 (239-303)||(34035918-34035982)
chr7 (270-306)||(43219646-43219682)
[»] scaffold0003 (1 HSPs)
scaffold0003 (241-299)||(306329-306387)
[»] scaffold0024 (1 HSPs)
scaffold0024 (173-282)||(21311-21420)
[»] scaffold0159 (1 HSPs)
scaffold0159 (257-306)||(27020-27069)


Alignment Details
Target: chr4 (Bit Score: 225; Significance: 1e-124; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 74 - 306
Target Start/End: Complemental strand, 55084715 - 55084483
Alignment:
Q  74 tccatacagttaatggtgtttggataaacatctcaatttgtgacttataggtttaaagcataagtgcttaatttgaaacttatagcataagtgattatga 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  55084715 tccatacagttaatggtgtttggataaacatctcaatttgtgacttataggtttaaagcataagtgcttaatttgaaacttatagcataagtgattatca 55084616  T
Q  174 tgataagcgcttatgcataagctatttctttgacagaagataaaagcaagttaaattgtttttgtttaagttgttttcatgaactatcttagagagctta 273  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  55084615 tgataagcgcttatgcataagctatttctttgacagaagataaaagcaagttaaattgtttttgtttaagttgttttcatgagctatcttagagagctta 55084516  T
Q  274 tgaaaataagctgaaaccagcttatgaacatgt 306  Q
    |||||||||||||||||||||||||||||||||    
T  55084515 tgaaaataagctgaaaccagcttatgaacatgt 55084483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 196 - 304
Target Start/End: Original strand, 47800581 - 47800689
Alignment:
Q  196 tatttctttgacagaagataaaagcaagttaaattgtttttgtttaagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagct 295  Q
    ||||||| | ||| |||||||||  |||||||| ||||||||| |||| ||||||||| | |||||||  |||||||||||||||||||||||| | |||    
T  47800581 tatttctataacaaaagataaaataaagttaaaatgtttttgtataagctgttttcataagctatcttgaagagcttatgaaaataagctgaaaaccgct 47800680  T
Q  296 tatgaacat 304  Q
    ||| |||||    
T  47800681 tataaacat 47800689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 152 - 304
Target Start/End: Original strand, 17883975 - 17884134
Alignment:
Q  152 cttatagcataagtgattatgatgataagcgcttatgcataagctatttctttgacagaagataaaagcaagttaaattgtttttgtttaagtt------ 245  Q
    |||||||||||||   |||| ||| |||| ||| |||  |||||||||||| | ||| |||||||||  |||||||||||||||||| ||||||          
T  17883975 cttatagcataaggacttatcatggtaagtgctcatgtgtaagctatttctataacaaaagataaaataaagttaaattgtttttgtataagttatcagt 17884074  T
Q  246 -gttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacat 304  Q
     |||||||| | |||| || |||||||||||||||| |||||||| || |||||||||||    
T  17884075 tgttttcataagctatattggagagcttatgaaaattagctgaaaacaacttatgaacat 17884134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 177 - 306
Target Start/End: Complemental strand, 4798697 - 4798568
Alignment:
Q  177 taagcgcttatgcataagctatttctttgacagaagataaaagcaagttaaattgtttttgtttaagttgttttcatgaactatcttagagagcttatga 276  Q
    |||| ||||||| ||||||||||||| |  || |||||||||  ||||  || ||||||  |  ||||||||||||| | ||||||| |||||||||||     
T  4798697 taagtgcttatgtataagctatttctatatcaaaagataaaataaagtctaaatgttttcctgcaagttgttttcataagctatcttggagagcttatgc 4798598  T
Q  277 aaataagctgaaaccagcttatgaacatgt 306  Q
    ||||||||| ||| ||||||||| ||||||    
T  4798597 aaataagctcaaaacagcttatgtacatgt 4798568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 240 - 306
Target Start/End: Original strand, 42121490 - 42121555
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    |||||||||||||||| ||||||| |||| ||| || ||||||||||||| ||||||||||||||||    
T  42121490 taagttgttttcatgagctatcttggagaacttgtggaaataagctgaaa-cagcttatgaacatgt 42121555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 299
Target Start/End: Complemental strand, 11158425 - 11158366
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatg 299  Q
    |||||||||||||| | |||||||||||||||| || ||||||||||||| ||| |||||    
T  11158425 taagttgttttcataagctatcttagagagcttgtggaaataagctgaaaacagtttatg 11158366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 303
Target Start/End: Complemental strand, 35571699 - 35571636
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaaca 303  Q
    |||| ||||||||| | |||||||||||| ||| |||||||||| ||||||||||| |||||||    
T  35571699 taagctgttttcataagctatcttagagaacttgtgaaaataagttgaaaccagctcatgaaca 35571636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 299
Target Start/End: Original strand, 49219141 - 49219200
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatg 299  Q
    |||||||||||||| |||||||||| |||| ||||| ||||||||||||| || ||||||    
T  49219141 taagttgttttcataaactatcttaaagagattatggaaataagctgaaaacaacttatg 49219200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 306
Target Start/End: Original strand, 2996575 - 2996641
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    |||||||||||||| | ||||||| |||||| |||||||||||| |||||  |||||||| ||||||    
T  2996575 taagttgttttcataagctatcttggagagcgtatgaaaataagttgaaaaaagcttatggacatgt 2996641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 17822933 - 17822872
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaa 301  Q
    |||||||||||||| | ||||||| |||| |||||||||||||||| |||  ||||||||||    
T  17822933 taagttgttttcataagctatcttggagaacttatgaaaataagctaaaaaaagcttatgaa 17822872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 240 - 305
Target Start/End: Original strand, 24929495 - 24929560
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatg 305  Q
    |||||||||||||| |||| |  ||||||||||||| ||||||||||||| ||  |||||||||||    
T  24929495 taagttgttttcataaactctactagagagcttatggaaataagctgaaaacaatttatgaacatg 24929560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 240 - 297
Target Start/End: Complemental strand, 30207639 - 30207582
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagctta 297  Q
    |||||||||||||| | ||| ||||||||| ||||| ||||||||||||| |||||||    
T  30207639 taagttgttttcataagctaccttagagagattatggaaataagctgaaaacagctta 30207582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 303
Target Start/End: Original strand, 1706624 - 1706687
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaaca 303  Q
    |||| ||||||||| ||||||||| || |||||||||||||||| || ||  ||||||||||||    
T  1706624 taagctgttttcataaactatcttggacagcttatgaaaataagttggaaatagcttatgaaca 1706687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 156 - 235
Target Start/End: Complemental strand, 26520388 - 26520309
Alignment:
Q  156 tagcataagtgattatgatgataagcgcttatgcataagctatttctttgacagaagataaaagcaagttaaattgtttt 235  Q
    ||||||||||| |||| ||||||||| |||||| |||| || ||||| | ||| ||||| |||  |||||||||||||||    
T  26520388 tagcataagtgtttatcatgataagcacttatgtataaactgtttctataacaaaagatgaaataaagttaaattgtttt 26520309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 245 - 304
Target Start/End: Complemental strand, 53673721 - 53673662
Alignment:
Q  245 tgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacat 304  Q
    ||||||||| | ||||||| ||||||||||| ||||||||||||| || |||||| ||||    
T  53673721 tgttttcataagctatcttggagagcttatgtaaataagctgaaaacaacttatggacat 53673662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 306
Target Start/End: Original strand, 1137722 - 1137780
Alignment:
Q  248 tttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    |||||| |||||||  |||||||||||| |||||| |||||| || |||||||||||||    
T  1137722 tttcataaactatccaagagagcttatggaaataaactgaaaacaacttatgaacatgt 1137780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 297
Target Start/End: Original strand, 1313129 - 1313167
Alignment:
Q  259 atcttagagagcttatgaaaataagctgaaaccagctta 297  Q
    |||||||||||||| |||||||||||| |||||||||||    
T  1313129 atcttagagagcttttgaaaataagctcaaaccagctta 1313167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 297
Target Start/End: Original strand, 1313177 - 1313211
Alignment:
Q  263 tagagagcttatgaaaataagctgaaaccagctta 297  Q
    |||||||||| ||||||||||||||||||||||||    
T  1313177 tagagagcttttgaaaataagctgaaaccagctta 1313211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 306
Target Start/End: Original strand, 11264303 - 11264369
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    |||||||||||||| | | ||| ||||||||||||| ||||||| ||||| ||| ||||| ||||||    
T  11264303 taagttgttttcataagccatcctagagagcttatggaaataagttgaaaacagtttatggacatgt 11264369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 299
Target Start/End: Original strand, 11802537 - 11802595
Alignment:
Q  241 aagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatg 299  Q
    ||||||||||||| | ||||  | |||||||||||| |||||||||||| |||||||||    
T  11802537 aagttgttttcataagctattatggagagcttatgagaataagctgaaaacagcttatg 11802595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 306
Target Start/End: Complemental strand, 29467676 - 29467626
Alignment:
Q  256 actatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    |||||| ||||||| ||||| ||||||||||||| ||||||||| ||||||    
T  29467676 actatcctagagagtttatggaaataagctgaaaacagcttatggacatgt 29467626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 299
Target Start/End: Complemental strand, 33534236 - 33534178
Alignment:
Q  241 aagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatg 299  Q
    ||||||||||| | || ||| || ||||||||||||||||||||||||| || ||||||    
T  33534236 aagttgttttcgtaaattatttttgagagcttatgaaaataagctgaaaacaacttatg 33534178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 306
Target Start/End: Complemental strand, 52746908 - 52746842
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    |||| ||||||||| | |||||||  |  |||||||||||| |||||||| ||||||||||||||||    
T  52746908 taagctgttttcataagctatcttgtaaggcttatgaaaatcagctgaaaacagcttatgaacatgt 52746842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 282
Target Start/End: Original strand, 56480350 - 56480392
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataa 282  Q
    |||| ||||||||| ||||||||| ||||||||||||||||||    
T  56480350 taagctgttttcataaactatcttggagagcttatgaaaataa 56480392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 287
Target Start/End: Complemental strand, 437502 - 437453
Alignment:
Q  238 tttaagttgttttcatgaactatcttagagagcttatgaaaataagctga 287  Q
    |||||||||||||||| | |||| ||||||  ||||||||||||||||||    
T  437502 tttaagttgttttcataagctattttagaggccttatgaaaataagctga 437453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 289
Target Start/End: Original strand, 1404419 - 1404468
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaa 289  Q
    ||||| |||||||| ||||||| | |||||||||||||| ||||||||||    
T  1404419 taagtggttttcataaactatcatggagagcttatgaaagtaagctgaaa 1404468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 303
Target Start/End: Original strand, 2703031 - 2703092
Alignment:
Q  243 gttgttttcatgaactatcttagagagcttatgaaaataagctg-aaaccagcttatgaaca 303  Q
    ||||||||||| |||||||   |||| ||||||||||||||||| ||| |||||||||||||    
T  2703031 gttgttttcattaactatcccggagaacttatgaaaataagctgaaaaacagcttatgaaca 2703092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 202
Target Start/End: Original strand, 2987085 - 2987146
Alignment:
Q  141 ttaatttgaaacttatagcataagtgattatgatgataagcgcttatgcataagctatttct 202  Q
    |||||||| | |||||| |||||||| |||| ||||||||| |||||  |||||||||||||    
T  2987085 ttaatttgcagcttataacataagtgtttatcatgataagcacttatttataagctatttct 2987146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 306
Target Start/End: Complemental strand, 22236148 - 22236107
Alignment:
Q  265 gagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    |||||||||||||||||||| |||| ||||| ||||||||||    
T  22236148 gagagcttatgaaaataagcagaaaacagctcatgaacatgt 22236107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 304
Target Start/End: Original strand, 47145971 - 47146028
Alignment:
Q  247 ttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacat 304  Q
    ||||||| |||| ||||  |||||||||||||||||| ||||| || |||||||||||    
T  47145971 ttttcataaactgtcttgaagagcttatgaaaataaggtgaaaacaacttatgaacat 47146028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 289
Target Start/End: Complemental strand, 53294182 - 53294133
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaa 289  Q
    ||||||||||| || |||||| ||||||| |||||||||| |||||||||    
T  53294182 taagttgtttttataaactatattagagaacttatgaaaacaagctgaaa 53294133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 306
Target Start/End: Original strand, 1312849 - 1312909
Alignment:
Q  246 gttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    |||||||||  ||||||| ||||| ||||| ||||||||||||| ||| ||||||| ||||    
T  1312849 gttttcatggtctatcttggagagtttatggaaataagctgaaaacagtttatgaatatgt 1312909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 257 - 297
Target Start/End: Original strand, 14011253 - 14011293
Alignment:
Q  257 ctatcttagagagcttatgaaaataagctgaaaccagctta 297  Q
    ||||||| ||||||||||| ||||||||||||| |||||||    
T  14011253 ctatcttggagagcttatggaaataagctgaaaacagctta 14011293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 304
Target Start/End: Original strand, 29263372 - 29263436
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacat 304  Q
    |||||||||||||| | ||||| |  ||||||| || ||||||||||||| || |||||||||||    
T  29263372 taagttgttttcataagctatcctgcagagcttgtggaaataagctgaaaacaacttatgaacat 29263436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 257 - 289
Target Start/End: Complemental strand, 30377466 - 30377434
Alignment:
Q  257 ctatcttagagagcttatgaaaataagctgaaa 289  Q
    ||||||| |||||||||||||||||||||||||    
T  30377466 ctatcttggagagcttatgaaaataagctgaaa 30377434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 257 - 289
Target Start/End: Complemental strand, 32421310 - 32421278
Alignment:
Q  257 ctatcttagagagcttatgaaaataagctgaaa 289  Q
    ||||||||||||| |||||||||||||||||||    
T  32421310 ctatcttagagaggttatgaaaataagctgaaa 32421278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 248 - 288
Target Start/End: Original strand, 44249295 - 44249335
Alignment:
Q  248 tttcatgaactatcttagagagcttatgaaaataagctgaa 288  Q
    |||||| ||||||||| ||||| ||||||||||||||||||    
T  44249295 tttcataaactatcttggagagtttatgaaaataagctgaa 44249335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 3e-23; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 176 - 307
Target Start/End: Complemental strand, 2128390 - 2128259
Alignment:
Q  176 ataagcgcttatgcataagctatttctttgacagaagataaaagcaagttaaattgtttttgtttaagttgttttcatgaactatcttagagagcttatg 275  Q
    ||||||| ||||| ||||||||||||| | ||| |||||||||  |||||||||||||||  | |||| ||||||||| | | |||||  ||| | ||||    
T  2128390 ataagcgtttatgtataagctatttctataacaaaagataaaataaagttaaattgttttactgtaagctgttttcataagccatcttttagaacgtatg 2128291  T
Q  276 aaaataagctgaaaccagcttatgaacatgtt 307  Q
    |||||||||||||| |||||||||||||||||    
T  2128290 aaaataagctgaaaacagcttatgaacatgtt 2128259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 168 - 306
Target Start/End: Original strand, 20669102 - 20669240
Alignment:
Q  168 ttatgatgataagcgcttatgcataagctatttctttgacagaagataaaagcaagttaaattgtttttgtttaagttgttttcatgaactatcttagag 267  Q
    |||| ||||||||| |||||| ||||||||||||| | |||  | ||| ||  |||| ||| |||| |  | |||| ||||||||| | ||||||| |||    
T  20669102 ttatcatgataagcacttatgtataagctatttctataacaagatatacaataaagtcaaaatgttgtcatataagctgttttcataagctatcttggag 20669201  T
Q  268 agcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    |||||||| |||||||| |||| ||||||||||||||||    
T  20669202 agcttatgtaaataagcggaaaacagcttatgaacatgt 20669240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 240 - 303
Target Start/End: Original strand, 21367669 - 21367732
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaaca 303  Q
    |||||||||||||| | ||||||| |||| |||||||||||||||||||| |||||| ||||||    
T  21367669 taagttgttttcataagctatcttggagaacttatgaaaataagctgaaaacagcttgtgaaca 21367732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 243 - 306
Target Start/End: Complemental strand, 33883815 - 33883752
Alignment:
Q  243 gttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    ||||||| ||| | |||||||||||| |||||||||||||||||||| || |||||||||||||    
T  33883815 gttgtttacataagctatcttagagaacttatgaaaataagctgaaaacaacttatgaacatgt 33883752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 152 - 306
Target Start/End: Original strand, 40665336 - 40665497
Alignment:
Q  152 cttatagcataagtgattatgatgataagcgcttatgcataagctatttctttgacagaagataaaagcaagttaaattgtttttgtttaagtt------ 245  Q
    ||||||||||||||  |||| ||||||||| ||| || | ||||||||| | | | ||||||||||   || | ||||| ||||||| ||||||          
T  40665336 cttatagcataagttcttatcatgataagcacttctgtacaagctatttttataatagaagataaactaaaataaaattatttttgtgtaagttataaga 40665435  T
Q  246 -gttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
     |||||||| |  |||||| |||||||||| |||||||||||||| ||||||||||||||||    
T  40665436 tgttttcataagttatcttggagagcttataaaaataagctgaaaacagcttatgaacatgt 40665497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 240 - 306
Target Start/End: Original strand, 43115058 - 43115124
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    |||||||||||||||||||||| | ||||||||||| ||||||||||||| ||  ||||| ||||||    
T  43115058 taagttgttttcatgaactatcattgagagcttatggaaataagctgaaaacaagttatggacatgt 43115124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 28622067 - 28622006
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaa 301  Q
    |||| ||||||||| ||||||||| |||| ||||||||||||| |||||| |||||||||||    
T  28622067 taagctgttttcataaactatcttcgagaacttatgaaaataacctgaaaacagcttatgaa 28622006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 142 - 305
Target Start/End: Complemental strand, 30574085 - 30573917
Alignment:
Q  142 taatttgaaacttatagcataagtgattatgatgataagcgcttatgcataagctatttctttgacagaagataaaagcaagttaaattgtttttgttta 241  Q
    ||||||| | |||||| ||||||   |||| |||||||||||||||| ||||||||||||| | | |  ||||||||  ||||||| || ||||| | ||    
T  30574085 taatttgcagcttatatcataagcatttatcatgataagcgcttatgtataagctatttctataaaa--agataaaataaagttaagttttttttttata 30573988  T
Q  242 a-------gttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatg 305  Q
    |       | ||||||||| | ||||||| ||||||| ||||| ||||||||||| |||||||||||||||    
T  30573987 atctatatgatgttttcataagctatcttggagagctgatgaacataagctgaaaacagcttatgaacatg 30573917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 190 - 289
Target Start/End: Original strand, 42808924 - 42809023
Alignment:
Q  190 ataagctatttctttgacagaagataaaagcaagttaaattgtttttgtttaagttgttttcatgaactatcttagagagcttatgaaaataagctgaaa 289  Q
    ||||||| ||||| | ||| |||||||||  |||||||||||||||| | |||| ||||||||| | || |||  |||||||| | ||||||||||||||    
T  42808924 ataagctgtttctataacaaaagataaaataaagttaaattgtttttatataagctgttttcataagctctctcggagagcttgtcaaaataagctgaaa 42809023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 247 - 289
Target Start/End: Complemental strand, 34924599 - 34924557
Alignment:
Q  247 ttttcatgaactatcttagagagcttatgaaaataagctgaaa 289  Q
    ||||||| | |||||||||||||||||||||||||||||||||    
T  34924599 ttttcataagctatcttagagagcttatgaaaataagctgaaa 34924557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 306
Target Start/End: Original strand, 36139896 - 36139946
Alignment:
Q  256 actatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    ||||||||  |||||||||||||||||||||||| |||||| |||||||||    
T  36139896 actatcttgaagagcttatgaaaataagctgaaaacagcttgtgaacatgt 36139946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 306
Target Start/End: Original strand, 36887506 - 36887572
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    |||||||||||||| | | |||||  ||| |||||||||||||||||||| || |||||||||||||    
T  36887506 taagttgttttcataagccatcttgaagaacttatgaaaataagctgaaaacatcttatgaacatgt 36887572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 306
Target Start/End: Complemental strand, 3044302 - 3044261
Alignment:
Q  265 gagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    ||||||||||||||||||| ||||| ||||||||||||||||    
T  3044302 gagagcttatgaaaataagttgaaaacagcttatgaacatgt 3044261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 306
Target Start/End: Original strand, 25925769 - 25925810
Alignment:
Q  265 gagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    ||||||||||||||||||| ||||| ||||||||||||||||    
T  25925769 gagagcttatgaaaataagttgaaaacagcttatgaacatgt 25925810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 241 - 306
Target Start/End: Complemental strand, 48049049 - 48048984
Alignment:
Q  241 aagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    ||||||||||||| | ||||||| | ||| ||||| ||||||||||||| ||||||||| ||||||    
T  48049049 aagttgttttcattagctatcttggggaggttatggaaataagctgaaaacagcttatggacatgt 48048984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 196
Target Start/End: Complemental strand, 1508762 - 1508710
Alignment:
Q  144 atttgaaacttatagcataagtgattatgatgataagcgcttatgcataagct 196  Q
    ||||| ||||||||||| ||||| |||| |||||||||||||||| |||||||    
T  1508762 atttgcaacttatagcacaagtgcttatcatgataagcgcttatgtataagct 1508710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 4013562 - 4013498
Alignment:
Q  225 taaattgtttttgtttaagttgttttcatgaactatcttagagagcttatgaaaataagctgaaa 289  Q
    |||||||||||| | |||| ||||||||| | || || |||||||||| ||||||||||||||||    
T  4013562 taaattgtttttatataagctgttttcattagctgtcctagagagcttgtgaaaataagctgaaa 4013498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 306
Target Start/End: Original strand, 36101596 - 36101636
Alignment:
Q  266 agagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    |||||||||||||||||||||||| |||||| |||||||||    
T  36101596 agagcttatgaaaataagctgaaaacagcttgtgaacatgt 36101636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 306
Target Start/End: Original strand, 50952337 - 50952401
Alignment:
Q  242 agttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    ||||||| | || ||||||||| ||||||||||| ||||||||| ||| ||| ||||||||||||    
T  50952337 agttgttgtaataaactatcttggagagcttatggaaataagcttaaaacagtttatgaacatgt 50952401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 307
Target Start/End: Original strand, 53952047 - 53952117
Alignment:
Q  240 taagttgttttcatgaactatctta---gagagcttatgaaaataagctgaaaccagcttatgaacatgtt 307  Q
    |||||||||||||| ||||||  ||   ||||| ||||||||||||||||||| ||||| |||||||||||    
T  53952047 taagttgttttcataaactataataaccgagagtttatgaaaataagctgaaaacagctcatgaacatgtt 53952117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 257 - 300
Target Start/End: Complemental strand, 8007750 - 8007707
Alignment:
Q  257 ctatcttagagagcttatgaaaataagctgaaaccagcttatga 300  Q
    |||||||||||||||||||||||||| ||||||  |||||||||    
T  8007750 ctatcttagagagcttatgaaaataaactgaaataagcttatga 8007707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 306
Target Start/End: Original strand, 1816585 - 1816651
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    |||||||||||||| | ||||  | |||||||||| |||||||||||||| |||| |||||| ||||    
T  1816585 taagttgttttcataagctatactggagagcttatcaaaataagctgaaaacagcctatgaaaatgt 1816651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 306
Target Start/End: Complemental strand, 22214727 - 22214661
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    |||||||||||||| | ||||| ||||||  ||| | ||||||||||||| ||||||||| ||||||    
T  22214727 taagttgttttcataagctatcctagagacattacggaaataagctgaaaacagcttatggacatgt 22214661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 299
Target Start/End: Original strand, 25170815 - 25170868
Alignment:
Q  245 tgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatg 299  Q
    ||||||||| | ||||||| ||||||||||||||||||| ||||| |||||||||    
T  25170815 tgttttcataagctatctt-gagagcttatgaaaataagttgaaatcagcttatg 25170868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 306
Target Start/End: Original strand, 34954112 - 34954150
Alignment:
Q  268 agcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    |||||||||||||||||||||| ||||| ||||||||||    
T  34954112 agcttatgaaaataagctgaaaacagctcatgaacatgt 34954150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 306
Target Start/End: Complemental strand, 39602278 - 39602212
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    |||| ||||||||| | ||||||| |||| |||||||||||||| ||||| ||  ||||||||||||    
T  39602278 taagctgttttcataagctatctttgagaacttatgaaaataagttgaaaacaatttatgaacatgt 39602212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 306
Target Start/End: Complemental strand, 41644513 - 41644447
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    |||| ||||||||| | ||||| |||||| |||| | ||||||||||||| ||||||||||| ||||    
T  41644513 taagctgttttcataagctatcgtagagatcttaaggaaataagctgaaaacagcttatgaaaatgt 41644447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 301
Target Start/End: Original strand, 46031007 - 46031053
Alignment:
Q  255 aactatcttagagagcttatgaaaataagctgaaaccagcttatgaa 301  Q
    ||||||||| |||| ||||| |||||||||||||| |||||||||||    
T  46031007 aactatcttggagaacttattaaaataagctgaaaacagcttatgaa 46031053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 168 - 202
Target Start/End: Original strand, 54194442 - 54194476
Alignment:
Q  168 ttatgatgataagcgcttatgcataagctatttct 202  Q
    ||||||||||||||||||||| |||||||||||||    
T  54194442 ttatgatgataagcgcttatgtataagctatttct 54194476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 245
Target Start/End: Original strand, 139916 - 139985
Alignment:
Q  176 ataagcgcttatgcataagctatttctttgacagaagataaaagcaagttaaattgtttttgtttaagtt 245  Q
    |||||| |||||| ||||||||||||| | ||| |||||||||  |||| ||||||| ||||| ||||||    
T  139916 ataagcacttatgaataagctatttctattacacaagataaaataaagtaaaattgtatttgtataagtt 139985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 305
Target Start/End: Original strand, 237399 - 237464
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatg 305  Q
    |||||||||||||| |  |||| || |||||||| | ||||||||||||| ||||||||| |||||    
T  237399 taagttgttttcataagttatcctatagagcttacggaaataagctgaaaacagcttatggacatg 237464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 285
Target Start/End: Original strand, 2825149 - 2825194
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagct 285  Q
    |||||| ||||||| | ||||||| |||||||||||||||||||||    
T  2825149 taagttattttcataagctatcttggagagcttatgaaaataagct 2825194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 306
Target Start/End: Original strand, 21574517 - 21574558
Alignment:
Q  265 gagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    ||||||||||| ||||||||| ||| ||||||||||||||||    
T  21574517 gagagcttatggaaataagctaaaagcagcttatgaacatgt 21574558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 306
Target Start/End: Original strand, 24785212 - 24785273
Alignment:
Q  245 tgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    ||||||||| | ||||| | ||||||||||| ||||||||| ||| || |||||||||||||    
T  24785212 tgttttcataagctatcctcgagagcttatgtaaataagctaaaaacaacttatgaacatgt 24785273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 304
Target Start/End: Complemental strand, 25453920 - 25453863
Alignment:
Q  247 ttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacat 304  Q
    ||||||| ||||||| | || ||||||||||||||||||||||  ||||| |||||||    
T  25453920 ttttcataaactatcctggaaagcttatgaaaataagctgaaaagagcttgtgaacat 25453863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 306
Target Start/End: Original strand, 31010421 - 31010470
Alignment:
Q  257 ctatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    ||||| ||||||||||||| || |||||||||| ||||||||| ||||||    
T  31010421 ctatcatagagagcttatggaattaagctgaaaacagcttatggacatgt 31010470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 238
Target Start/End: Original strand, 36189506 - 36189559
Alignment:
Q  185 tatgcataagctatttctttgacagaagataaaagcaagttaaattgtttttgt 238  Q
    |||| ||||||||||||| | ||| |||||||||  ||||||||||||||||||    
T  36189506 tatgtataagctatttctcttacaaaagataaaataaagttaaattgtttttgt 36189559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 289
Target Start/End: Original strand, 37138292 - 37138341
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaa 289  Q
    |||||| ||||||| | ||||||||||||| ||| |||||||||||||||    
T  37138292 taagttattttcataagctatcttagagagtttaggaaaataagctgaaa 37138341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 289
Target Start/End: Original strand, 41633362 - 41633411
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaa 289  Q
    |||| ||||||||| | |||| || |||||||||||||||||||||||||    
T  41633362 taagctgttttcatcagctattttggagagcttatgaaaataagctgaaa 41633411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 266 - 306
Target Start/End: Original strand, 5166351 - 5166391
Alignment:
Q  266 agagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    ||||| |||||||||||| ||||| ||||||||||||||||    
T  5166351 agagcgtatgaaaataagatgaaaacagcttatgaacatgt 5166391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 270 - 306
Target Start/End: Original strand, 5391911 - 5391947
Alignment:
Q  270 cttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    |||||||||||||| ||||| ||||||||||||||||    
T  5391911 cttatgaaaataagttgaaaacagcttatgaacatgt 5391947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 247 - 299
Target Start/End: Complemental strand, 16790439 - 16790387
Alignment:
Q  247 ttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatg 299  Q
    ||||||| | ||||||| || ||||||||||||||| |||||| |||||||||    
T  16790439 ttttcataagctatcttggatagcttatgaaaataaactgaaaacagcttatg 16790387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 32064444 - 32064500
Alignment:
Q  243 gttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatg 299  Q
    ||||| ||||| ||||||| || |||||||||||||||||| ||||| ||| |||||    
T  32064444 gttgtgttcataaactatcctaaagagcttatgaaaataagttgaaaacagtttatg 32064500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 247 - 299
Target Start/End: Complemental strand, 34414845 - 34414793
Alignment:
Q  247 ttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatg 299  Q
    ||||||| ||||||| | ||||| ||||||||||||||||||| || ||||||    
T  34414845 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 34414793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 307
Target Start/End: Original strand, 38971275 - 38971327
Alignment:
Q  255 aactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgtt 307  Q
    ||||||||||||||||| ||  ||||||| ||||| ||||||| |||||||||    
T  38971275 aactatcttagagagctaatataaataagttgaaaacagcttacgaacatgtt 38971327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 270 - 306
Target Start/End: Complemental strand, 39723278 - 39723242
Alignment:
Q  270 cttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  39723278 cttatgagaataagctgaaaacagcttatgaacatgt 39723242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 266 - 306
Target Start/End: Complemental strand, 45432981 - 45432941
Alignment:
Q  266 agagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    |||||||||| ||||||||||||| || |||||||||||||    
T  45432981 agagcttatggaaataagctgaaaacaacttatgaacatgt 45432941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 304
Target Start/End: Complemental strand, 47319339 - 47319275
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacat 304  Q
    |||| |||| |||| | |||||||||||||||||||||||||||  |||| || ||||| |||||    
T  47319339 taagctgttgtcataatctatcttagagagcttatgaaaataagtagaaatcaacttattaacat 47319275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 306
Target Start/End: Complemental strand, 53848129 - 53848065
Alignment:
Q  242 agttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    |||| ||||||| |||||||  |||||||||||  |||||||| |||| ||||||||| ||||||    
T  53848129 agttattttcataaactatcccagagagcttatagaaataagccgaaaacagcttatggacatgt 53848065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 1e-19; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 152 - 305
Target Start/End: Original strand, 10744215 - 10744368
Alignment:
Q  152 cttatagcataagtgattatgatgataagcgcttatgcataagctatttctttgacagaagataaaagcaagttaaattgtttttgtttaagttgttttc 251  Q
    ||||||||||||| | |||| |||| ||| ||| ||| |||||||||||   ||| | |||||||||  ||||| |||||||||  | |||| |||||||    
T  10744215 cttatagcataagcgcttatcatgacaagtgctaatgtataagctattttgatgaaaaaagataaaataaagttgaattgttttcctataagctgttttc 10744314  T
Q  252 atgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatg 305  Q
    || | || ||||||||| ||||| |||||||| ||||| |||||||||||||||    
T  10744315 ataagctgtcttagagaacttataaaaataagatgaaaacagcttatgaacatg 10744368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 240 - 306
Target Start/End: Original strand, 25479583 - 25479649
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    |||||||||||||| | ||||| ||||||||||||||||||||||||||| || || ||||||||||    
T  25479583 taagttgttttcataagctatcctagagagcttatgaaaataagctgaaaacaactaatgaacatgt 25479649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 306
Target Start/End: Original strand, 30257683 - 30257751
Alignment:
Q  238 tttaagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    |||||||||||||||| ||||||| | ||| ||||||  ||||||||||||| ||||||||||||||||    
T  30257683 tttaagttgttttcataaactatcctggagggcttatagaaataagctgaaaacagcttatgaacatgt 30257751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 255 - 306
Target Start/End: Original strand, 6292510 - 6292561
Alignment:
Q  255 aactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    |||||| || ||||||||||||||||||||||||| ||||||||||||||||    
T  6292510 aactattttggagagcttatgaaaataagctgaaaacagcttatgaacatgt 6292561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 247 - 306
Target Start/End: Complemental strand, 10199469 - 10199410
Alignment:
Q  247 ttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    ||||||| | |||| |||||||||||||||||||||||||||| || |||||||||||||    
T  10199469 ttttcataagctattttagagagcttatgaaaataagctgaaaacaacttatgaacatgt 10199410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 5894334 - 5894276
Alignment:
Q  144 atttgaaacttatagcataagtgattatgatgataagcgcttatgcataagctatttct 202  Q
    ||||||| ||||||||| ||||| |||| |||||||||||||||| |||||||||||||    
T  5894334 atttgaagcttatagcacaagtgcttatcatgataagcgcttatgtataagctatttct 5894276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 260 - 306
Target Start/End: Complemental strand, 31517788 - 31517742
Alignment:
Q  260 tcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||    
T  31517788 tcttggagagcttatgaaaataagctgaaaacagcttatgaacatgt 31517742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 266 - 306
Target Start/End: Complemental strand, 37593726 - 37593686
Alignment:
Q  266 agagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  37593726 agagcttatgaaaataagctgaaaacagcttatgaacatgt 37593686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 306
Target Start/End: Original strand, 27140431 - 27140546
Alignment:
Q  191 taagctatttctttgacagaagataaaagcaagttaaattgtttttgtttaagttgttttcatgaactatcttagagagcttatgaaaataagctgaaac 290  Q
    |||| ||||||| | ||| |||||||||  |  ||||||||||||| | |||| |||||| || | ||||| | ||||||||||| |||||||||||||     
T  27140431 taagttatttctataacaaaagataaaataatattaaattgtttttatataagctgtttttataagctatcatggagagcttatgcaaataagctgaaaa 27140530  T
Q  291 cagcttatgaacatgt 306  Q
    || |||||| ||||||    
T  27140531 caacttatggacatgt 27140546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 289
Target Start/End: Original strand, 49888705 - 49888818
Alignment:
Q  183 cttatgcataagctatttctttgacagaagataaaagcaagttaaattgtttttgtttaag-------ttgttttcatgaactatcttagagagcttatg 275  Q
    |||||| ||||||||||||||||  | |||||||||  ||||| ||||||||| || ||||       |||||||||| | |||||||||||| ||||||    
T  49888705 cttatgtataagctatttctttggaaaaagataaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatg 49888804  T
Q  276 aaaataagctgaaa 289  Q
    ||||||||| ||||    
T  49888805 aaaataagccgaaa 49888818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 306
Target Start/End: Complemental strand, 37842423 - 37842357
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    |||||||||||||| | |||||||  ||| ||||| |||||||||||||| | ||||||||||||||    
T  37842423 taagttgttttcataagctatcttgaagaacttataaaaataagctgaaaactgcttatgaacatgt 37842357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 240 - 305
Target Start/End: Complemental strand, 23902135 - 23902070
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatg 305  Q
    |||||||||||||  | ||||||||||||||||||| || |||||||||| || |||||| |||||    
T  23902135 taagttgttttcaaaagctatcttagagagcttatggaagtaagctgaaaacaacttatgcacatg 23902070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 252 - 289
Target Start/End: Original strand, 33975584 - 33975621
Alignment:
Q  252 atgaactatcttagagagcttatgaaaataagctgaaa 289  Q
    |||||||||| |||||||||||||||||||||||||||    
T  33975584 atgaactatcctagagagcttatgaaaataagctgaaa 33975621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 230 - 303
Target Start/End: Complemental strand, 38503543 - 38503470
Alignment:
Q  230 tgtttttgtttaagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaaca 303  Q
    ||||| ||| |||||||||||  | | ||||||| |||| |||||||||||||||||||| || ||||||||||    
T  38503543 tgtttatgtataagttgtttttgttagctatcttggagaacttatgaaaataagctgaaaacaacttatgaaca 38503470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 298
Target Start/End: Complemental strand, 41195256 - 41195203
Alignment:
Q  245 tgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttat 298  Q
    ||||||||| ||||||||| |||| ||||||||||||||||||||  |||||||    
T  41195256 tgttttcataaactatcttggagaacttatgaaaataagctgaaaaaagcttat 41195203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 257 - 306
Target Start/End: Complemental strand, 46252733 - 46252684
Alignment:
Q  257 ctatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    ||||||| |||||||||||||||||| |||||| || |||||||||||||    
T  46252733 ctatcttggagagcttatgaaaataacctgaaaacaacttatgaacatgt 46252684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 13975634 - 13975698
Alignment:
Q  225 taaattgtttttgtttaagttgttttcatgaactatcttagagagcttatgaaaataagctgaaa 289  Q
    |||||||||||| | |||| ||||||||| | || || |||||||||| ||||||||||||||||    
T  13975634 taaattgtttttatataagctgttttcattagctgtcctagagagcttgtgaaaataagctgaaa 13975698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 304
Target Start/End: Original strand, 35351041 - 35351105
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacat 304  Q
    |||||||| ||||| ||||||| |||||||||||  |||||||||||||| || ||||| |||||    
T  35351041 taagttgtcttcataaactatcctagagagcttacaaaaataagctgaaaacaacttataaacat 35351105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 301
Target Start/End: Original strand, 45975697 - 45975753
Alignment:
Q  245 tgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaa 301  Q
    ||||||||| | ||||||| ||||  ||||||||||||||||||| |||||||||||    
T  45975697 tgttttcataagctatcttggagaatttatgaaaataagctgaaaacagcttatgaa 45975753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 306
Target Start/End: Original strand, 7472313 - 7472380
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccag-cttatgaacatgt 306  Q
    |||| ||||| ||| | ||||||| ||||||||||||||||||||||||| |||  ||||||||||||    
T  7472313 taagctgtttccataagctatcttggagagcttatgaaaataagctgaaaacagttttatgaacatgt 7472380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 263 - 306
Target Start/End: Complemental strand, 11639461 - 11639418
Alignment:
Q  263 tagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    ||||||||||||||||||||||| ||| ||||||||| ||||||    
T  11639461 tagagagcttatgaaaataagctaaaaacagcttatggacatgt 11639418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 265 - 304
Target Start/End: Original strand, 15361067 - 15361106
Alignment:
Q  265 gagagcttatgaaaataagctgaaaccagcttatgaacat 304  Q
    ||||||||||||||||||||||||| || |||||||||||    
T  15361067 gagagcttatgaaaataagctgaaaacaacttatgaacat 15361106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 152 - 303
Target Start/End: Complemental strand, 27146411 - 27146260
Alignment:
Q  152 cttatagcataagtgattatgatgataagcgcttatgcataagctatttctttgacagaagataaaagcaagttaaattgtttttgtttaagttgttttc 251  Q
    ||||||||||||||   ||| |||||||||| ||||| ||||| |||||||    || |||||||||  || |||||||  ||| || |||||| ||||     
T  27146411 cttatagcataagtacatatcatgataagcgtttatgtataaggtatttctacagcaaaagataaaataaatttaaattagtttcgtataagttattttt 27146312  T
Q  252 atgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaaca 303  Q
     | |||||||||  ||| |||| |||| |||| ||||| |||||||||||||    
T  27146311 gtaaactatcttgaagaacttacgaaagtaagttgaaaacagcttatgaaca 27146260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 245 - 304
Target Start/End: Complemental strand, 28077132 - 28077073
Alignment:
Q  245 tgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacat 304  Q
    ||||||||| | |||| |||||||||||||  ||||||||||||| || |||||||||||    
T  28077132 tgttttcataagctattttagagagcttattgaaataagctgaaaacaacttatgaacat 28077073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 299
Target Start/End: Complemental strand, 31294589 - 31294530
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatg 299  Q
    |||||||||||  | ||||||| ||||||||||||||||||||| |||||  ||||||||    
T  31294589 taagttgtttttgtaaactatcatagagagcttatgaaaataagttgaaaagagcttatg 31294530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 306
Target Start/End: Complemental strand, 1565603 - 1565537
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    |||| ||||||| | | |||| || ||||||| ||||||||||||||||| ||||||||| ||||||    
T  1565603 taagctgttttcttaatctattttggagagctcatgaaaataagctgaaaacagcttatgcacatgt 1565537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 306
Target Start/End: Complemental strand, 7137066 - 7137000
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    |||| ||||||||| | ||||||| |||| ||||||||||||||||||||  | |||||||| ||||    
T  7137066 taagctgttttcataagctatcttggagaacttatgaaaataagctgaaaataacttatgaatatgt 7137000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 302
Target Start/End: Complemental strand, 7218142 - 7218080
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaac 302  Q
    |||||||||||||| | ||||| | |||| |||||||||||||| ||||| |||||| |||||    
T  7218142 taagttgttttcataacctatcctggagaacttatgaaaataagttgaaaacagcttgtgaac 7218080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 290
Target Start/End: Complemental strand, 13363480 - 13363442
Alignment:
Q  252 atgaactatcttagagagcttatgaaaataagctgaaac 290  Q
    |||||||||||| |||||||||| |||||||||||||||    
T  13363480 atgaactatcttggagagcttataaaaataagctgaaac 13363442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 235
Target Start/End: Complemental strand, 23544782 - 23544720
Alignment:
Q  173 atgataagcgcttatgcataagctatttctttgacagaagataaaagcaagttaaattgtttt 235  Q
    |||||||||||||||| ||||||||||||| ||  | |||||||||  |||| ||||||||||    
T  23544782 atgataagcgcttatgtataagctatttctatggaaaaagataaaattaagtcaaattgtttt 23544720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 306
Target Start/End: Complemental strand, 24460471 - 24460409
Alignment:
Q  244 ttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    |||||||||| | ||||| | |||||||||  ||||||||||| || ||||||||||||||||    
T  24460471 ttgttttcataagctatccttgagagcttacaaaaataagctggaaacagcttatgaacatgt 24460409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 230
Target Start/End: Original strand, 33186173 - 33186251
Alignment:
Q  152 cttatagcataagtgattatgatgataagcgcttatgcataagctatttctttgacagaagataaaagcaagttaaatt 230  Q
    ||||||||| | ||| |||| ||||||| |||||||||||||||| ||||| |  || | |||||||| ||||||||||    
T  33186173 cttatagcacaggtgcttattatgataaccgcttatgcataagctctttctatagcaaaggataaaagaaagttaaatt 33186251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 306
Target Start/End: Original strand, 34290238 - 34290304
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    |||| ||||||||| | |||||||  ||| |||||||||||||||||||| || |||||||| ||||    
T  34290238 taagctgttttcataagctatcttgaagaacttatgaaaataagctgaaaacaacttatgaatatgt 34290304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 306
Target Start/End: Original strand, 37240844 - 37240910
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    |||| ||||||||| ||||||| | ||| | ||||||||||||||||| | || |||||||||||||    
T  37240844 taagctgttttcataaactatccttgagggtttatgaaaataagctgataacatcttatgaacatgt 37240910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 303
Target Start/End: Complemental strand, 51695558 - 51695500
Alignment:
Q  245 tgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaaca 303  Q
    ||||||||| | ||||||| ||||  |||||||||||||||||||  ||||||||||||    
T  51695558 tgttttcataagctatcttggagaatttatgaaaataagctgaaaatagcttatgaaca 51695500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 306
Target Start/End: Original strand, 4622112 - 4622161
Alignment:
Q  257 ctatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    ||||||| |||||||| |||||||||||| ||| ||||||||| ||||||    
T  4622112 ctatcttggagagcttgtgaaaataagctaaaaacagcttatggacatgt 4622161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 306
Target Start/End: Original strand, 8016276 - 8016325
Alignment:
Q  257 ctatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    ||||||| ||||||||| ||||||||||||||| ||  ||||||||||||    
T  8016276 ctatcttggagagcttaggaaaataagctgaaaacaagttatgaacatgt 8016325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 305
Target Start/End: Complemental strand, 12564942 - 12564877
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatg 305  Q
    |||||||||||||| | |||||||  || ||||| | ||||||||||||| ||||||||| |||||    
T  12564942 taagttgttttcataagctatcttttagtgcttacggaaataagctgaaaacagcttatggacatg 12564877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 306
Target Start/End: Complemental strand, 28689503 - 28689454
Alignment:
Q  257 ctatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    ||||||| || |||||||||||||||||||||| || |||||| ||||||    
T  28689503 ctatcttggaaagcttatgaaaataagctgaaaacaacttatggacatgt 28689454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 289
Target Start/End: Original strand, 34952217 - 34952266
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaa 289  Q
    |||||||||||||| | |||||  ||||| ||||||||||||||||||||    
T  34952217 taagttgttttcataagctatcaaagagaacttatgaaaataagctgaaa 34952266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 286
Target Start/End: Complemental strand, 37241889 - 37241844
Alignment:
Q  241 aagttgttttcatgaactatcttagagagcttatgaaaataagctg 286  Q
    ||||||||||||| |  |||| ||||||||||||||||||||||||    
T  37241889 aagttgttttcataagatatcctagagagcttatgaaaataagctg 37241844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 305
Target Start/End: Complemental strand, 39270493 - 39270428
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatg 305  Q
    |||| ||||||||| | ||| | |||||||| |||||||||||| ||||| ||||||||| |||||    
T  39270493 taagctgttttcataagctaccatagagagcatatgaaaataagttgaaaacagcttatggacatg 39270428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 305
Target Start/End: Complemental strand, 39348035 - 39347970
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatg 305  Q
    |||||||||||||| ||||||| |  | |||||||| ||||||||||||| || |||||| |||||    
T  39348035 taagttgttttcataaactatcctgcaaagcttatggaaataagctgaaaacaacttatggacatg 39347970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 289
Target Start/End: Complemental strand, 40394953 - 40394905
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaa 289  Q
    |||||||||||||| ||| ||| || ||||||||||||||||||||||||    
T  40394953 taagttgttttcat-aaccatcctatagagcttatgaaaataagctgaaa 40394905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 306
Target Start/End: Complemental strand, 4699681 - 4699617
Alignment:
Q  242 agttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    |||| ||||||| |||||||   ||||||||||  ||||||||| ||| ||||||||||||||||    
T  4699681 agttattttcataaactatcccggagagcttatagaaataagctaaaaacagcttatgaacatgt 4699617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 289
Target Start/End: Complemental strand, 4700129 - 4700085
Alignment:
Q  245 tgttttcatgaactatcttagagagcttatgaaaataagctgaaa 289  Q
    |||||| || ||||||| | |||||||||||||||||||||||||    
T  4700129 tgtttttataaactatcctggagagcttatgaaaataagctgaaa 4700085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 267 - 299
Target Start/End: Original strand, 15799730 - 15799762
Alignment:
Q  267 gagcttatgaaaataagctgaaaccagcttatg 299  Q
    |||||||||| ||||||||||||||||||||||    
T  15799730 gagcttatgagaataagctgaaaccagcttatg 15799762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 188
Target Start/End: Complemental strand, 24552513 - 24552477
Alignment:
Q  152 cttatagcataagtgattatgatgataagcgcttatg 188  Q
    ||||||||| |||||||||| ||||||||||||||||    
T  24552513 cttatagcacaagtgattatcatgataagcgcttatg 24552477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 200
Target Start/End: Complemental strand, 47499006 - 47498958
Alignment:
Q  152 cttatagcataagtgattatgatgataagcgcttatgcataagctattt 200  Q
    ||||||||| ||||| |||| ||||||||||||| || |||||||||||    
T  47499006 cttatagcacaagtgcttatcatgataagcgcttgtgtataagctattt 47498958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 300
Target Start/End: Complemental strand, 51929843 - 51929783
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatga 300  Q
    |||| ||||||||| | ||||  ||||||||||||| |||||||| |||| ||||||||||    
T  51929843 taagctgttttcataagctattctagagagcttatggaaataagccgaaatcagcttatga 51929783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 2e-18; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 152 - 306
Target Start/End: Complemental strand, 37353411 - 37353251
Alignment:
Q  152 cttatagcataagtgattatgatgataagcgcttatgcataagctatttctttgacagaagataaaagcaagttaaattgtttttg-------tttaagt 244  Q
    |||||||||||| || ||||||||||||||||||||| | || |||||||| | ||| ||||| |||  |||||||||||||||||       | ||||     
T  37353411 cttatagcataaatgcttatgatgataagcgcttatgtacaaactatttctataacaaaagat-aaataaagttaaattgtttttgtgtatgctataagc 37353313  T
Q  245 tgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    ||||||| | | ||||||| |||||||||||||||||| |||||| ||| ||||||| ||||    
T  37353312 tgttttcttaagctatctttgagagcttatgaaaataatctgaaaacagtttatgaatatgt 37353251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 152 - 300
Target Start/End: Original strand, 10114397 - 10114551
Alignment:
Q  152 cttatagcataagtgattatgatgataagcgcttatgcataagctatttctttgacagaagataaaagcaagttaaattgtttttg-------tttaagt 244  Q
    ||||||||||||||| ||||||||||||| ||||||| ||||||||||||| |  || |||||||||  ||||| ||||||||| |       | ||||     
T  10114397 cttatagcataagtggttatgatgataagtgcttatgtataagctatttctatagcaaaagataaaa-taagttgaattgttttggtataagctataagc 10114495  T
Q  245 tgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatga 300  Q
    ||||||||| | |||| || |||| | |||||||||||||||||| |||| |||||    
T  10114496 tgttttcattagctatattggagaacatatgaaaataagctgaaaacagcatatga 10114551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 265 - 306
Target Start/End: Original strand, 20672777 - 20672818
Alignment:
Q  265 gagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    ||||||||||||||||||||||||| ||||||||||||||||    
T  20672777 gagagcttatgaaaataagctgaaaacagcttatgaacatgt 20672818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 27028833 - 27028894
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaa 301  Q
    |||| ||||||||| | ||||||| |||||||||||||||||||||||||  ||||||||||    
T  27028833 taagctgttttcataagctatcttggagagcttatgaaaataagctgaaaatagcttatgaa 27028894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 175 - 302
Target Start/End: Original strand, 21653011 - 21653145
Alignment:
Q  175 gataagcgcttatgcataagctatttctttgacagaagataaaagcaagttaaattgtttttgtttaag-------ttgttttcatgaactatcttagag 267  Q
    |||||||||||||| ||| ||||||| | | ||| |||||||||  ||||||||||| ||| || || |       ||| |||||| | ||||||| |||    
T  21653011 gataagcgcttatgtataggctatttatgtaacaaaagataaaataaagttaaattgatttcgtgtaggctacaaattgctttcattagctatcttggag 21653110  T
Q  268 agcttatgaaaataagctgaaaccagcttatgaac 302  Q
    ||||||||||||||||||||||  |||||||||||    
T  21653111 agcttatgaaaataagctgaaaatagcttatgaac 21653145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 168 - 307
Target Start/End: Complemental strand, 37444562 - 37444421
Alignment:
Q  168 ttatgatgataagcgcttatgcataagctatttctttgacagaagataaaagcaagttaaattgtttttgtttaagttgttttcatgaac---tatctta 264  Q
    |||| |||||||||||||||| |||||||||| || | ||| ||||||||   ||||||||||||||| || |||| | || |||| |||   | ||||     
T  37444562 ttatcatgataagcgcttatgtataagctattactataacaaaagataaagtaaagttaaattgttttcgtataagct-ttgtcataaactcttttcttt 37444464  T
Q  265 gagagcttatgaaaataagctgaaaccagcttatgaacatgtt 307  Q
    || ||||||||||||||||||||||  | ||||| ||||||||    
T  37444463 gatagcttatgaaaataagctgaaaataacttataaacatgtt 37444421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 138 - 201
Target Start/End: Complemental strand, 2833507 - 2833444
Alignment:
Q  138 tgcttaatttgaaacttatagcataagtgattatgatgataagcgcttatgcataagctatttc 201  Q
    |||||| |||| | ||||||||||||||| |||| |||||||| ||||||| ||||||||||||    
T  2833507 tgcttattttgcagcttatagcataagtgcttatcatgataagtgcttatgaataagctatttc 2833444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 295
Target Start/End: Original strand, 7714244 - 7714299
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagct 295  Q
    |||||||||||||||| ||||||| ||||||| ||||||||||| ||||| |||||    
T  7714244 taagttgttttcatgagctatcttggagagctcatgaaaataagttgaaaacagct 7714299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 303
Target Start/End: Complemental strand, 9956882 - 9956819
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaaca 303  Q
    |||||||||||||| | ||||||| |||| |||||||||||||||||||| |  ||||||||||    
T  9956882 taagttgttttcataatctatcttggagaacttatgaaaataagctgaaaactacttatgaaca 9956819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 168 - 263
Target Start/End: Original strand, 26215419 - 26215514
Alignment:
Q  168 ttatgatgataagcgcttatgcataagctatttctttgacagaagataaaagcaagttaaattgtttttgtttaagttgttttcatgaactatctt 263  Q
    |||| |||||||||||||||| ||||||||||||| | ||| |||||||||  |||||||| | |||| || |||  ||||||||| | |||||||    
T  26215419 ttataatgataagcgcttatgtataagctatttctataacaaaagataaaataaagttaaactattttcgtataatatgttttcataagctatctt 26215514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 299
Target Start/End: Original strand, 31862495 - 31862554
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatg 299  Q
    |||| ||||||||| |  |||| ||||||||||||||||||||||||||| |||||||||    
T  31862495 taagatgttttcataagttatcctagagagcttatgaaaataagctgaaaacagcttatg 31862554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 247 - 306
Target Start/End: Complemental strand, 42215143 - 42215084
Alignment:
Q  247 ttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    ||||||| | ||||||| ||||||||||| ||||||||||||| || |||||||||||||    
T  42215143 ttttcataagctatcttggagagcttatgtaaataagctgaaaacaacttatgaacatgt 42215084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 298
Target Start/End: Complemental strand, 26473820 - 26473762
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttat 298  Q
    |||||||||||||| | ||||| ||||||||||||||||||||| | |||| |||||||    
T  26473820 taagttgttttcataagctatcctagagagcttatgaaaataagttaaaactagcttat 26473762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 244 - 305
Target Start/End: Complemental strand, 2458630 - 2458569
Alignment:
Q  244 ttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatg 305  Q
    |||||| ||| | ||||| ||||||||||||| |||||| |||||| |||||||||||||||    
T  2458630 ttgtttacataagctatcctagagagcttatggaaataaactgaaaacagcttatgaacatg 2458569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 152 - 201
Target Start/End: Original strand, 2840266 - 2840315
Alignment:
Q  152 cttatagcataagtgattatgatgataagcgcttatgcataagctatttc 201  Q
    ||||||||||||||| |||| |||||||| ||||||| ||||||||||||    
T  2840266 cttatagcataagtgcttatcatgataagtgcttatgaataagctatttc 2840315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 152 - 201
Target Start/End: Original strand, 2844953 - 2845002
Alignment:
Q  152 cttatagcataagtgattatgatgataagcgcttatgcataagctatttc 201  Q
    ||||||||||||||| |||| |||||||| ||||||| ||||||||||||    
T  2844953 cttatagcataagtgcttatcatgataagtgcttatgaataagctatttc 2845002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 300
Target Start/End: Original strand, 11494155 - 11494208
Alignment:
Q  247 ttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatga 300  Q
    ||||||| | |||||||  |||||||||||||||||||||||| ||||||||||    
T  11494155 ttttcataagctatcttgaagagcttatgaaaataagctgaaagcagcttatga 11494208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 306
Target Start/End: Original strand, 30389106 - 30389167
Alignment:
Q  245 tgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    ||||||||| | || || |||||| |||||||||||||||||||| || |||||||||||||    
T  30389106 tgttttcataagctttcctagagaacttatgaaaataagctgaaaacaacttatgaacatgt 30389167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 308
Target Start/End: Original strand, 8062331 - 8062399
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgttg 308  Q
    |||| ||||||||| | ||||||||||||| ||||| ||||||||||||| || |||||| ||| ||||    
T  8062331 taagctgttttcataagctatcttagagagattatggaaataagctgaaaacatcttatggacacgttg 8062399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 303
Target Start/End: Complemental strand, 33714297 - 33714241
Alignment:
Q  247 ttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaaca 303  Q
    ||||||| | ||||||  |||||||||| |||||||||||||| |||||||||||||    
T  33714297 ttttcataagctatctgggagagcttataaaaataagctgaaaacagcttatgaaca 33714241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 200
Target Start/End: Complemental strand, 40859881 - 40859833
Alignment:
Q  152 cttatagcataagtgattatgatgataagcgcttatgcataagctattt 200  Q
    ||||||||| ||||| |||| |||||||||||||||| |||||||||||    
T  40859881 cttatagcacaagtgcttatcatgataagcgcttatgtataagctattt 40859833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 303
Target Start/End: Original strand, 1930037 - 1930100
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaaca 303  Q
    |||| ||||||||| | ||||||| | || ||| |||||||||||||||| |||||||||||||    
T  1930037 taagctgttttcataagctatcttggtgaccttgtgaaaataagctgaaaacagcttatgaaca 1930100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 247 - 306
Target Start/End: Complemental strand, 10075612 - 10075553
Alignment:
Q  247 ttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    ||||||| | ||||| ||||||||||||||||||||||| ||| |||||| | |||||||    
T  10075612 ttttcataagctatcctagagagcttatgaaaataagctaaaagcagcttgtcaacatgt 10075553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 307
Target Start/End: Original strand, 12851182 - 12851245
Alignment:
Q  244 ttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgtt 307  Q
    |||||||||| | || || | |||||||||||||||||||| |||| || ||||||||||||||    
T  12851182 ttgttttcataagctttccttgagagcttatgaaaataagccgaaaacatcttatgaacatgtt 12851245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 247 - 306
Target Start/End: Complemental strand, 28784856 - 28784798
Alignment:
Q  247 ttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    ||||||| | |||||||||||||||| | ||||||||||||||  |||||||||||||||    
T  28784856 ttttcataagctatcttagagagcttgtaaaaataagctgaaa-aagcttatgaacatgt 28784798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 258 - 305
Target Start/End: Original strand, 43413028 - 43413074
Alignment:
Q  258 tatcttagagagcttatgaaaataagctgaaaccagcttatgaacatg 305  Q
    |||||||||||||||||| ||||||||||||| ||| |||||||||||    
T  43413028 tatcttagagagcttatggaaataagctgaaa-cagattatgaacatg 43413074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 303
Target Start/End: Original strand, 1113053 - 1113123
Alignment:
Q  233 ttttgtttaagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaaca 303  Q
    |||||| |||| ||||| |||  |||||||| |||| ||||||||||| |||| ||| |||||||||||||    
T  1113053 ttttgtataagctgtttacatacactatcttggagaacttatgaaaattagctaaaaacagcttatgaaca 1113123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 306
Target Start/End: Original strand, 9700027 - 9700069
Alignment:
Q  264 agagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    |||||||||||||||||||| ||||| ||||||||| ||||||    
T  9700027 agagagcttatgaaaataaggtgaaaacagcttatggacatgt 9700069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 307
Target Start/End: Original strand, 11493984 - 11494034
Alignment:
Q  257 ctatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgtt 307  Q
    |||||||  ||||||||||||| |||||||||  |||||||||||||||||    
T  11493984 ctatcttgaagagcttatgaaagtaagctgaacacagcttatgaacatgtt 11494034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 306
Target Start/End: Original strand, 13459647 - 13459713
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    |||||||||||||| ||  ||| || |||||||||||||||| ||||||| ||| ||||||| ||||    
T  13459647 taagttgttttcataaatcatcctacagagcttatgaaaataggctgaaaacagtttatgaaaatgt 13459713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 218
Target Start/End: Complemental strand, 34522195 - 34522153
Alignment:
Q  176 ataagcgcttatgcataagctatttctttgacagaagataaaa 218  Q
    ||||||||||||| ||||||||||||| ||||| |||||||||    
T  34522195 ataagcgcttatgaataagctatttctatgacacaagataaaa 34522153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 301
Target Start/End: Complemental strand, 35644073 - 35643995
Alignment:
Q  223 gttaaattgtttttgtttaagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaa 301  Q
    ||||||||||||| || || |||||||  |  |||||| || ||||||||||||||||||| |||||  ||||||||||    
T  35644073 gttaaattgttttcgtataggttgtttatacaaactatattggagagcttatgaaaataagttgaaaaaagcttatgaa 35643995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 303
Target Start/End: Complemental strand, 42215349 - 42215311
Alignment:
Q  265 gagagcttatgaaaataagctgaaaccagcttatgaaca 303  Q
    ||||||||||| ||||||||||||| |||||||||||||    
T  42215349 gagagcttatgtaaataagctgaaaacagcttatgaaca 42215311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 306
Target Start/End: Complemental strand, 4055679 - 4055618
Alignment:
Q  245 tgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    ||||||||| | |||||| |||||||||| | ||||||||||||| ||| ||||| ||||||    
T  4055679 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgt 4055618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 306
Target Start/End: Complemental strand, 7918513 - 7918448
Alignment:
Q  241 aagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    ||||||||||| | | ||||||| ||||||||||  ||||||| || || ||||||||||||||||    
T  7918513 aagttgttttcgtaagctatcttggagagcttattgaaataagttggaaacagcttatgaacatgt 7918448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 8062526 - 8062587
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaa 301  Q
    |||| |||| |||| | ||||||||||||| |||||||||||||||| ||  ||||||||||    
T  8062526 taagatgttctcataagctatcttagagagtttatgaaaataagctggaaatagcttatgaa 8062587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 306
Target Start/End: Original strand, 10383892 - 10383953
Alignment:
Q  245 tgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    ||||||| | ||||||| || |||||||||| |||||||||| || ||||||||||| ||||    
T  10383892 tgttttcgtaaactatcatatagagcttatggaaataagctgtaaacagcttatgaaaatgt 10383953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 306
Target Start/End: Complemental strand, 43052789 - 43052728
Alignment:
Q  245 tgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    |||||| || |||||  ||| |||||||||||||||||||| |||||| |||||||| ||||    
T  43052789 tgtttttataaactagtttaaagagcttatgaaaataagctaaaaccaacttatgaagatgt 43052728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 281
Target Start/End: Original strand, 43709275 - 43709316
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaata 281  Q
    |||||||||||||||| ||||| | |||||||||||||||||    
T  43709275 taagttgttttcatgagctatcctggagagcttatgaaaata 43709316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 289
Target Start/End: Original strand, 4762512 - 4762560
Alignment:
Q  241 aagttgttttcatgaactatcttagagagcttatgaaaataagctgaaa 289  Q
    ||||||||||||| | |||||||  |||||||||| |||||||||||||    
T  4762512 aagttgttttcataagctatcttgaagagcttatgtaaataagctgaaa 4762560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 238
Target Start/End: Original strand, 7646107 - 7646199
Alignment:
Q  146 ttgaaacttatagcataagtgattatgatgataagcgcttatgcataagctatttctttgacagaagataaaagcaagttaaattgtttttgt 238  Q
    ||||| ||||| |||||||||||| |  | ||||| | ||||| ||||||||||||| | | | ||| |||||  ||||||||||||||||||    
T  7646107 ttgaagcttattgcataagtgattctcgtaataagtggttatgtataagctatttctataagaaaaggtaaaataaagttaaattgtttttgt 7646199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 300
Target Start/End: Original strand, 10120758 - 10120818
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatga 300  Q
    |||| ||||| ||| |||||| || |||| |||||||||||||||||||| |||| |||||    
T  10120758 taagctgtttacattaactatattggagaacttatgaaaataagctgaaaacagcatatga 10120818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 236
Target Start/End: Original strand, 14482110 - 14482193
Alignment:
Q  152 cttatagcataagtgattatgatgataagcgcttatgcataagctatttctttgacagaagataaaagcaagttaaattgttttt 236  Q
    |||||||||| |||| |||| || ||||| ||||||| |||| |||||||| | ||| |||||||||  |||| |||||||||||    
T  14482110 cttatagcattagtgcttatcat-ataagtgcttatgtataaactatttctataacaaaagataaaataaagtcaaattgttttt 14482193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 288
Target Start/End: Original strand, 27754406 - 27754454
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaa 288  Q
    ||||| |||||||| | |||| || ||||||||||||||||||||||||    
T  27754406 taagtggttttcataagctattttggagagcttatgaaaataagctgaa 27754454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 257 - 305
Target Start/End: Complemental strand, 39866785 - 39866737
Alignment:
Q  257 ctatcttagagagcttatgaaaataagctgaaaccagcttatgaacatg 305  Q
    |||||||  ||||||||||||||||| |||||| ||||||||| |||||    
T  39866785 ctatcttgaagagcttatgaaaataaactgaaaacagcttatggacatg 39866737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 258 - 306
Target Start/End: Complemental strand, 41606953 - 41606905
Alignment:
Q  258 tatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    |||| ||||||||||||| ||||||||||||| || ||| |||||||||    
T  41606953 tatcctagagagcttatggaaataagctgaaaacaacttttgaacatgt 41606905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 289
Target Start/End: Complemental strand, 44236886 - 44236842
Alignment:
Q  245 tgttttcatgaactatcttagagagcttatgaaaataagctgaaa 289  Q
    ||||||||| | |||| || |||||||||||||||||||||||||    
T  44236886 tgttttcataagctatattggagagcttatgaaaataagctgaaa 44236842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 8e-18; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 140 - 308
Target Start/End: Complemental strand, 10772053 - 10771888
Alignment:
Q  140 cttaatttgaaacttatagcataagtgattatgatgataagcgcttatgcataagctatttctttgacagaagataaaagcaagttaaattgtttttgtt 239  Q
    ||||||||| | ||||||||||||||| |||| ||||||| | | |||| ||||||||||||| | ||| || ||  ||   ||||||||||||||  |     
T  10772053 cttaatttgcagcttatagcataagtgcttatcatgataaacacatatgtataagctatttctataacaaaaaatgtaa---agttaaattgttttcata 10771957  T
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgttg 308  Q
    ||||||| |||||| | |||||  |||||| ||||||||||||||||||  | |||||| |||||||||    
T  10771956 taagttgctttcataagctatccgagagagtttatgaaaataagctgaacacggcttatcaacatgttg 10771888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 152 - 303
Target Start/End: Original strand, 39105371 - 39105529
Alignment:
Q  152 cttatagcataagtgattatgatgataagcgcttatgcataagctatttctttgacagaagataaaagcaagttaaattgtttttgtttaag-------t 244  Q
    ||||||||||||||| |||| |||||||||||||||| ||||||||||||| |  |  || || |||  ||||||||||||||| || ||||            
T  39105371 cttatagcataagtgcttatcatgataagcgcttatgtataagctatttctatagctaaatatgaaatgaagttaaattgttttcgtataagctataatc 39105470  T
Q  245 tgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaaca 303  Q
    ||||||||| | ||||||| |||| |||||||||||||||| |||  ||||||||||||    
T  39105471 tgttttcataagctatcttggagaacttatgaaaataagctaaaaatagcttatgaaca 39105529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 173 - 303
Target Start/End: Complemental strand, 4014566 - 4014429
Alignment:
Q  173 atgataagcgcttatgcataagctatttctttgacagaagataaaagcaagttaaattgtttttgtt-------taagttgttttcatgaactatcttag 265  Q
    ||||||||||| |||| ||||||||||||| |  || |||||||||  |||||| ||||||||||         |||| ||||||||| | ||||||| |    
T  4014566 atgataagcgcctatgtataagctatttctatagcaaaagataaaataaagttagattgtttttggaaaaatgataagctgttttcataagctatcttgg 4014467  T
Q  266 agagcttatgaaaataagctgaaaccagcttatgaaca 303  Q
    ||| |||||||||||||||||||| |||||||||||||    
T  4014466 agaacttatgaaaataagctgaaaacagcttatgaaca 4014429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 240 - 306
Target Start/End: Complemental strand, 17258951 - 17258885
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    |||| ||||||||| ||||||| |  |||||||||||||||||||||||| ||||||||||||||||    
T  17258951 taagctgttttcataaactatcctgaagagcttatgaaaataagctgaaaacagcttatgaacatgt 17258885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 173 - 249
Target Start/End: Original strand, 465882 - 465958
Alignment:
Q  173 atgataagcgcttatgcataagctatttctttgacagaagataaaagcaagttaaattgtttttgtttaagttgttt 249  Q
    ||||||||| |||||  ||||||||||||| ||||| |||||||||  |||||||||||||||||| |||| |||||    
T  465882 atgataagcacttatatataagctatttctatgacaaaagataaaataaagttaaattgtttttgtataagctgttt 465958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 306
Target Start/End: Complemental strand, 37611279 - 37611217
Alignment:
Q  244 ttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    |||||||||| | ||||||| ||||||||||| |||||| |||||| ||||||||||||||||    
T  37611279 ttgttttcataagctatcttggagagcttatggaaataacctgaaaacagcttatgaacatgt 37611217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 306
Target Start/End: Complemental strand, 37788009 - 37787947
Alignment:
Q  244 ttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    |||||||||| | ||||||| ||||||||||| |||||| |||||| ||||||||||||||||    
T  37788009 ttgttttcataagctatcttggagagcttatggaaataacctgaaaacagcttatgaacatgt 37787947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 152 - 303
Target Start/End: Complemental strand, 9202911 - 9202753
Alignment:
Q  152 cttatagcataagtgattatgatgataagcgcttatgcataagctatttctttgacagaagataaaagcaagttaaattgtttttgt-------ttaagt 244  Q
    ||||||||| ||||| |||| |||||||| ||||||  ||||||||||||| |  || |||||||||  |||||||||||||||  |        ||||     
T  9202911 cttatagcacaagtgtttatcatgataagtgcttatatataagctatttctgtagcaaaagataaaataaagttaaattgttttcatataagcaataagc 9202812  T
Q  245 tgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaaca 303  Q
    ||||||||| |  ||||||  ||| ||||||||||||||||| || |||||||||||||    
T  9202811 tgttttcataagttatcttgaagaacttatgaaaataagctggaaacagcttatgaaca 9202753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 152 - 307
Target Start/End: Original strand, 42582819 - 42582981
Alignment:
Q  152 cttatagcataagtgattatgatgataagcgcttatgcataagctatttctttgacagaagataaaagcaagttaaattgtttttgtt-------taagt 244  Q
    ||||||||||||| | |||| || ||||||||||||| ||||||||||||  ||| | ||||| |||  |||||||||||| || |||       ||||     
T  42582819 cttatagcataagcgtttatcataataagcgcttatgtataagctatttccatgataaaagatgaaataaagttaaattgtgttcgtttaaggtataagc 42582918  T
Q  245 tgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgtt 307  Q
    ||||||  | | |||| || |||| |||||||||||||||| ||| ||| |||||||||||||    
T  42582919 tgtttttgtaagctatattggagaacttatgaaaataagctcaaaacagtttatgaacatgtt 42582981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 190 - 305
Target Start/End: Original strand, 11615453 - 11615568
Alignment:
Q  190 ataagctatttctttgacagaagataaaagcaagttaaattgtttttgtttaagttgttttcatgaactatcttagagagcttatgaaaataagctgaaa 289  Q
    ||||||||||| | | ||| |||||||||  |||| |||||||||  || |||| ||||||||| |  |||| |   ||||||||| |||||||||||||    
T  11615453 ataagctatttttataacaaaagataaaataaagtcaaattgtttacgtataagctgttttcataagatatccttatgagcttatggaaataagctgaaa 11615552  T
Q  290 ccagcttatgaacatg 305  Q
     |||||||||||||||    
T  11615553 acagcttatgaacatg 11615568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 243
Target Start/End: Complemental strand, 1465181 - 1465091
Alignment:
Q  153 ttatagcataagtgattatgatgataagcgcttatgcataagctatttctttgacagaagataaaagcaagttaaattgtttttgtttaag 243  Q
    |||||||||||||| |||| | |||||||||||||| ||||||||||||| |  || | |||||||  ||||||||| | |||||| ||||    
T  1465181 ttatagcataagtgcttatcaagataagcgcttatgtataagctatttctatagcataggataaaataaagttaaatcgcttttgtgtaag 1465091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 306
Target Start/End: Original strand, 17368678 - 17368744
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    |||||||||||||| | ||||||| ||||| ||||| ||||||||||||| | || |||||||||||    
T  17368678 taagttgttttcataagctatcttggagaggttatggaaataagctgaaaactgcatatgaacatgt 17368744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 240 - 308
Target Start/End: Complemental strand, 912716 - 912647
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatg-aaaataagctgaaaccagcttatgaacatgttg 308  Q
    ||||||||||| || ||||||||| || |||||||| |||||||||||||| |||||  |||||||||||    
T  912716 taagttgtttttataaactatcttggaaagcttatggaaaataagctgaaaacagctcgtgaacatgttg 912647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 306
Target Start/End: Original strand, 14331394 - 14331435
Alignment:
Q  265 gagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    ||||||||||||||||||||||||| ||||||||| ||||||    
T  14331394 gagagcttatgaaaataagctgaaatcagcttatggacatgt 14331435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 306
Target Start/End: Original strand, 36638754 - 36638815
Alignment:
Q  245 tgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    ||||||||| |  |||| ||||||||||||| |||||||||||||  |||||||||||||||    
T  36638754 tgttttcataagttatcctagagagcttatggaaataagctgaaaaaagcttatgaacatgt 36638815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 39248008 - 39248057
Alignment:
Q  153 ttatagcataagtgattatgatgataagcgcttatgcataagctatttct 202  Q
    ||||||||||| || ||||||||||||||||||||| | |||||||||||    
T  39248008 ttatagcataattgcttatgatgataagcgcttatgtaaaagctatttct 39248057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 303
Target Start/End: Original strand, 7984978 - 7985034
Alignment:
Q  247 ttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaaca 303  Q
    ||||||| | ||||||| ||||  ||||||||||||||||||| |||||||||||||    
T  7984978 ttttcataagctatcttggagaatttatgaaaataagctgaaaacagcttatgaaca 7985034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 304
Target Start/End: Complemental strand, 15309061 - 15308997
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacat 304  Q
    |||||||||||||| | ||||| | |||| |||||||||||||| ||||| ||| ||||||||||    
T  15309061 taagttgttttcattagctatcattgagatcttatgaaaataagatgaaaacaggttatgaacat 15308997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 140 - 235
Target Start/End: Complemental strand, 5963457 - 5963362
Alignment:
Q  140 cttaatttgaaacttatagcataagtgattatgatgataagcgcttatgcataagctatttctttgacagaagataaaagcaagttaaattgtttt 235  Q
    ||||||||| || ||||||||||||   |||| |||||||||||||||| | || |||||||| | |   |||||||||  |||||||||||||||    
T  5963457 cttaatttgcaatttatagcataagcatttatcatgataagcgcttatgtacaaactatttctataatgaaagataaaataaagttaaattgtttt 5963362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 238 - 297
Target Start/End: Original strand, 36318774 - 36318833
Alignment:
Q  238 tttaagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagctta 297  Q
    |||||||||||||||| | ||||||| ||||  ||||| ||||||||||||| |||||||    
T  36318774 tttaagttgttttcataagctatcttggagaatttatgtaaataagctgaaaacagctta 36318833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 307
Target Start/End: Complemental strand, 40205142 - 40205075
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgtt 307  Q
    |||||||||||||| | ||||| | ||||||||||  ||||||||||||| ||| ||||| |||||||    
T  40205142 taagttgttttcataagctatcctggagagcttatagaaataagctgaaaacagattatggacatgtt 40205075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 139 - 202
Target Start/End: Complemental strand, 42573955 - 42573892
Alignment:
Q  139 gcttaatttgaaacttatagcataagtgattatgatgataagcgcttatgcataagctatttct 202  Q
    |||||||||| | |||||||| | || | |||| |||||||||||||||| |||||||||||||    
T  42573955 gcttaatttgcagcttatagcctgagcgcttatcatgataagcgcttatgtataagctatttct 42573892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 297
Target Start/End: Original strand, 10363760 - 10363810
Alignment:
Q  247 ttttcatgaactatcttagagagcttatgaaaataagctgaaaccagctta 297  Q
    ||||||| |||||||| ||||| ||| |||||||||||||||| |||||||    
T  10363760 ttttcataaactatctcagagaacttgtgaaaataagctgaaaacagctta 10363810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 306
Target Start/End: Original strand, 11707057 - 11707123
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    |||| ||||||||| | |||||||  ||||||| |||||||||||||||| || ||||| |||||||    
T  11707057 taagctgttttcataagctatcttgtagagcttttgaaaataagctgaaaacaacttataaacatgt 11707123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 306
Target Start/End: Original strand, 12467163 - 12467201
Alignment:
Q  268 agcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    |||||||||||||||||||||| |||||||| |||||||    
T  12467163 agcttatgaaaataagctgaaaacagcttataaacatgt 12467201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 266 - 304
Target Start/End: Original strand, 12521556 - 12521594
Alignment:
Q  266 agagcttatgaaaataagctgaaaccagcttatgaacat 304  Q
    |||||||||| ||||||||||||| ||||||||||||||    
T  12521556 agagcttatggaaataagctgaaaacagcttatgaacat 12521594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 304
Target Start/End: Complemental strand, 28413334 - 28413288
Alignment:
Q  258 tatcttagagagcttatgaaaataagctgaaaccagcttatgaacat 304  Q
    |||||| ||||| ||||| ||||||||||||| ||||||||||||||    
T  28413334 tatcttggagagtttatggaaataagctgaaaacagcttatgaacat 28413288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 298
Target Start/End: Complemental strand, 38104917 - 38104867
Alignment:
Q  248 tttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttat 298  Q
    |||||| | ||||||||||||||||||| ||||||||||||| || |||||    
T  38104917 tttcataagctatcttagagagcttatggaaataagctgaaaacaacttat 38104867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 306
Target Start/End: Original strand, 4619734 - 4619775
Alignment:
Q  265 gagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    |||| |||||| ||||||| ||||||||||||||||||||||    
T  4619734 gagaacttatggaaataaggtgaaaccagcttatgaacatgt 4619775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 289
Target Start/End: Original strand, 6593301 - 6593350
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaa 289  Q
    |||| |||||| || | ||| |||||||||||||||||||||||||||||    
T  6593301 taagctgttttgataagctaccttagagagcttatgaaaataagctgaaa 6593350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 7907883 - 7907944
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaa 301  Q
    ||||||||||| || | || |||| |||||||||||||| |||||||||| || ||||||||    
T  7907883 taagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 7907944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 306
Target Start/End: Complemental strand, 10125761 - 10125720
Alignment:
Q  265 gagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    ||||||||||||||||||||||||| || ||||| |||||||    
T  10125761 gagagcttatgaaaataagctgaaaacaccttatcaacatgt 10125720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 289
Target Start/End: Complemental strand, 10272499 - 10272450
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaa 289  Q
    |||||||||||||| | | ||||| ||||| |||||||||||||||||||    
T  10272499 taagttgttttcataagccatcttggagagtttatgaaaataagctgaaa 10272450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 303
Target Start/End: Original strand, 34160751 - 34160796
Alignment:
Q  258 tatcttagagagcttatgaaaataagctgaaaccagcttatgaaca 303  Q
    |||||| |||| |||||||||||||||||||| ||| |||||||||    
T  34160751 tatcttggagaacttatgaaaataagctgaaaacagtttatgaaca 34160796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 306
Target Start/End: Complemental strand, 37526242 - 37526201
Alignment:
Q  265 gagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    ||||||||||| ||||||||||||| |||||||| |||||||    
T  37526242 gagagcttatggaaataagctgaaaacagcttattaacatgt 37526201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 306
Target Start/End: Complemental strand, 37690679 - 37690638
Alignment:
Q  265 gagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    ||||||||||| ||||||||||||| |||||||| |||||||    
T  37690679 gagagcttatggaaataagctgaaaacagcttattaacatgt 37690638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 41981933 - 41981872
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaa 301  Q
    |||| ||||||||| |||||| || |||| |||| ||||||||||| ||| |||||||||||    
T  41981933 taagctgttttcataaactatttttgagaacttacgaaaataagctaaaagcagcttatgaa 41981872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 196
Target Start/End: Complemental strand, 3735664 - 3735620
Alignment:
Q  152 cttatagcataagtgattatgatgataagcgcttatgcataagct 196  Q
    ||||||||| ||| |||||| |||||||||||||||| |||||||    
T  3735664 cttatagcacaagagattatcatgataagcgcttatggataagct 3735620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 238
Target Start/End: Complemental strand, 37112395 - 37112335
Alignment:
Q  178 aagcgcttatgcataagctatttctttgacagaagataaaagcaagttaaattgtttttgt 238  Q
    ||||||||||| |||||||||||||    || |||||||||  ||||||||||||||||||    
T  37112395 aagcgcttatgtataagctatttctacagcaaaagataaaacaaagttaaattgtttttgt 37112335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 304
Target Start/End: Complemental strand, 37588428 - 37588364
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacat 304  Q
    |||||||||||||| |  |||  | ||||||||||| ||||||||||||| |||||||| |||||    
T  37588428 taagttgttttcataagttattctggagagcttatggaaataagctgaaaacagcttattaacat 37588364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 274 - 306
Target Start/End: Original strand, 41225088 - 41225120
Alignment:
Q  274 tgaaaataagctgaaaccagcttatgaacatgt 306  Q
    |||||||||||| ||||||||||||||||||||    
T  41225088 tgaaaataagctaaaaccagcttatgaacatgt 41225120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 3e-17; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 168 - 289
Target Start/End: Complemental strand, 32364871 - 32364750
Alignment:
Q  168 ttatgatgataagcgcttatgcataagctatttctttgacagaagataaaagcaagttaaattgtttttgtttaagttgttttcatgaactatcttagag 267  Q
    |||| ||||||||| |||||| ||||||||||||| | ||   ||||||||  |  |||||||||||| || |||| ||||| | | |||||||||||||    
T  32364871 ttatcatgataagcacttatgtataagctatttctataacttcagataaaataacattaaattgttttcgtataagctgtttacgtaaactatcttagag 32364772  T
Q  268 agcttatgaaaataagctgaaa 289  Q
    | ||||||||||||||||||||    
T  32364771 atcttatgaaaataagctgaaa 32364750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 240 - 303
Target Start/End: Original strand, 9174817 - 9174880
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaaca 303  Q
    |||| ||||||||| | |||||||| ||||||||||||||||||||||||  ||||||||||||    
T  9174817 taagctgttttcataagctatcttacagagcttatgaaaataagctgaaaatagcttatgaaca 9174880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 240 - 306
Target Start/End: Original strand, 33942152 - 33942218
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    |||||||||||||| | | ||| ||||||||| |||||||| |||||||| ||||||||||||||||    
T  33942152 taagttgttttcataagccatcatagagagctaatgaaaattagctgaaaacagcttatgaacatgt 33942218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 245 - 303
Target Start/End: Complemental strand, 35379079 - 35379021
Alignment:
Q  245 tgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaaca 303  Q
    ||||||||| | ||||||| ||||||||||||||||||||||||| || ||||||||||    
T  35379079 tgttttcataagctatcttggagagcttatgaaaataagctgaaaacaacttatgaaca 35379021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 173 - 307
Target Start/End: Original strand, 42907287 - 42907430
Alignment:
Q  173 atgataagcgcttatgcataagctatttctttgacagaagataaaagcaagttaaattgtttttgtttaag-------ttgttttcatgaa--ctatctt 263  Q
    ||||||||| ||||   ||||||||||||| | |||||||| ||||  ||||||||||||||| |||||||       |||||||||   |  ||| |||    
T  42907287 atgataagcacttacatataagctatttctataacagaagaaaaaataaagttaaattgttttcgtttaagctataagttgttttcacatatgctaactt 42907386  T
Q  264 agagagcttatgaaaataagctgaaaccagcttatgaacatgtt 307  Q
     ||||||||||||||||| ||||||| |||||||||||||||||    
T  42907387 ggagagcttatgaaaataggctgaaagcagcttatgaacatgtt 42907430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 245 - 306
Target Start/End: Complemental strand, 19333388 - 19333327
Alignment:
Q  245 tgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    ||||||| | |||||| || ||||||||||||||||||||||| | ||||||||||||||||    
T  19333388 tgttttcttaaactatattggagagcttatgaaaataagctgagaacagcttatgaacatgt 19333327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 210 - 305
Target Start/End: Complemental strand, 12313278 - 12313176
Alignment:
Q  210 aagataaaagcaagttaaattgtttttgtttaag-------ttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaac 302  Q
    |||||||||  |||||||||| ||||||||||||       |||||| ||| | ||||||| ||||||||||||||||||| ||||| || |||||||||    
T  12313278 aagataaaataaagttaaattatttttgtttaagctacaaattgtttacataagctatcttggagagcttatgaaaataaggtgaaatcaacttatgaac 12313179  T
Q  303 atg 305  Q
    |||    
T  12313178 atg 12313176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 307
Target Start/End: Complemental strand, 22681253 - 22681186
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgtt 307  Q
    |||| ||||||||| | ||||| |||||| |||||| ||||||||| ||| |||||||||||||||||    
T  22681253 taagctgttttcataatctatcctagagaacttatggaaataagctaaaaacagcttatgaacatgtt 22681186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 306
Target Start/End: Original strand, 5826219 - 5826285
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    |||||||||||||  ||||||| ||||||||||| | ||||||||||||| ||| ||||| ||||||    
T  5826219 taagttgttttcaaaaactatcatagagagcttacgtaaataagctgaaaacagtttatgcacatgt 5826285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 243
Target Start/End: Complemental strand, 36114665 - 36114595
Alignment:
Q  173 atgataagcgcttatgcataagctatttctttgacagaagataaaagcaagttaaattgtttttgtttaag 243  Q
    |||||||| |||||||||||| ||| |||| | ||| |||||||||  |||||||||||||||||| ||||    
T  36114665 atgataagtgcttatgcataacctagttctataacaaaagataaaataaagttaaattgtttttgtataag 36114595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 210 - 303
Target Start/End: Original strand, 16451090 - 16451183
Alignment:
Q  210 aagataaaagcaagttaaattgtttttgtttaagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaaca 303  Q
    |||||||||  |||||||||||||||  | |||| ||||||| | | ||||||| |||| ||  |||||||||||||||| ||||| |||||||    
T  16451090 aagataaaatgaagttaaattgttttcatataagctgttttcgtaagctatcttggagaactcgtgaaaataagctgaaaacagctcatgaaca 16451183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 298
Target Start/End: Complemental strand, 33319875 - 33319822
Alignment:
Q  245 tgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttat 298  Q
    ||||||||| ||||||||| |||| ||||||||||||||||||||  |||||||    
T  33319875 tgttttcataaactatcttggagaacttatgaaaataagctgaaaaaagcttat 33319822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 240 - 289
Target Start/End: Complemental strand, 43985071 - 43985022
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaa 289  Q
    |||||||||||||| | |||||||  ||||||||||||||||||||||||    
T  43985071 taagttgttttcataagctatcttgaagagcttatgaaaataagctgaaa 43985022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 304
Target Start/End: Original strand, 44443330 - 44443387
Alignment:
Q  247 ttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacat 304  Q
    ||||||| | ||||||| |||||| |||||||||||||||||| || |||||||||||    
T  44443330 ttttcataagctatctttgagagcatatgaaaataagctgaaaacaacttatgaacat 44443387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 304
Target Start/End: Original strand, 1625902 - 1625966
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacat 304  Q
    |||||||||||||| | ||||||| |||| |||| |||||| |||||||| || |||||||||||    
T  1625902 taagttgttttcataagctatcttggagaacttacgaaaatcagctgaaaacatcttatgaacat 1625966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 307
Target Start/End: Complemental strand, 27663446 - 27663378
Alignment:
Q  239 ttaagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgtt 307  Q
    ||||||||||||||  | ||||||| |||||||| ||| ||||||||| || |||| ||||||||||||    
T  27663446 ttaagttgttttcaaaagctatcttggagagcttgtgataataagctggaaacagcctatgaacatgtt 27663378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 306
Target Start/End: Complemental strand, 29316899 - 29316777
Alignment:
Q  191 taagctatttctttgacagaagataaaagcaagttaaattgtttt-------tgtttaagttgttttcatgaactatcttagagagcttatgaaaataag 283  Q
    |||||||| ||||| |||||||||||||  | |||||||||||||       | | |||| ||||||||| | ||||||| |||| |||||| |||||||    
T  29316899 taagctatatctttaacagaagataaaataaggttaaattgttttcacataatctataagctgttttcatcagctatcttggagaacttatggaaataag 29316800  T
Q  284 ctgaaaccagcttatgaacatgt 306  Q
    ||||||  | |||||||||||||    
T  29316799 ctgaaaagaacttatgaacatgt 29316777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 263 - 306
Target Start/End: Original strand, 1647261 - 1647304
Alignment:
Q  263 tagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    ||||||||||||| ||||||||||||| |||||||||| |||||    
T  1647261 tagagagcttatggaaataagctgaaaacagcttatgagcatgt 1647304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 11344423 - 11344364
Alignment:
Q  176 ataagcgcttatgcataagctatttctttgacagaagataaaagcaagttaaattgtttt 235  Q
    ||||| ||||||||||||| ||||||| | ||| |||||||||| |||| ||||||||||    
T  11344423 ataagtgcttatgcataagatatttctataacaaaagataaaagaaagtcaaattgtttt 11344364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 247 - 306
Target Start/End: Complemental strand, 34652097 - 34652038
Alignment:
Q  247 ttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    ||||||| | ||||||| ||||||||||| ||||||| ||||| ||||||||| ||||||    
T  34652097 ttttcataagctatcttggagagcttatggaaataagttgaaaacagcttatggacatgt 34652038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 303
Target Start/End: Original strand, 40279269 - 40279332
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaaca 303  Q
    |||||||||||||| | |||| || |||| ||||||||||| |||||||| ||| |||||||||    
T  40279269 taagttgttttcataagctatattggagaacttatgaaaattagctgaaaacagtttatgaaca 40279332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 303
Target Start/End: Original strand, 40279339 - 40279402
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaaca 303  Q
    |||||||||||||| | |||| || |||| ||||||||||| |||||||| ||| |||||||||    
T  40279339 taagttgttttcataagctatattggagaacttatgaaaattagctgaaaacagtttatgaaca 40279402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 303
Target Start/End: Complemental strand, 7928350 - 7928304
Alignment:
Q  257 ctatcttagagagcttatgaaaataagctgaaaccagcttatgaaca 303  Q
    ||||||| |||| |||||||||||||||||||| || ||||||||||    
T  7928350 ctatcttggagaacttatgaaaataagctgaaaacaacttatgaaca 7928304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 302
Target Start/End: Original strand, 33941915 - 33941973
Alignment:
Q  244 ttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaac 302  Q
    |||||||||| | ||||||| ||||| |||||| |||||| ||||| ||||||||||||    
T  33941915 ttgttttcataagctatcttggagagtttatgataataagttgaaagcagcttatgaac 33941973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 168 - 238
Target Start/End: Original strand, 36114342 - 36114412
Alignment:
Q  168 ttatgatgataagcgcttatgcataagctatttctttgacagaagataaaagcaagttaaattgtttttgt 238  Q
    |||| |||||||| ||||||  || |||||||| | ||||| |||||||||  ||||||||||||||||||    
T  36114342 ttatcatgataagtgcttatatattagctatttttatgacaaaagataaaataaagttaaattgtttttgt 36114412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 305
Target Start/End: Complemental strand, 38078475 - 38078413
Alignment:
Q  243 gttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatg 305  Q
    ||||||||||| | ||||||| ||||||||||| |||| |||| ||| || ||||||||||||    
T  38078475 gttgttttcataagctatcttggagagcttatgtaaatgagctcaaaacaacttatgaacatg 38078413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 306
Target Start/End: Complemental strand, 39236563 - 39236497
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    ||||||||||| || |||||||||| | ||||||| |||||||||| ||| || |||||||| ||||    
T  39236563 taagttgttttaataaactatcttaaaaagcttataaaaataagctaaaaacaacttatgaatatgt 39236497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 234
Target Start/End: Original strand, 39567810 - 39567892
Alignment:
Q  152 cttatagcataagtgattatgatgataagcgcttatgcataagctatttctttgacagaagataaaagcaagttaaattgttt 234  Q
    ||||| ||||||| | |||| ||||||||| ||| || ||||| ||||||| | ||| |||||||||  ||||||||||||||    
T  39567810 cttattgcataagcgcttatcatgataagcacttgtgtataagatatttctataacaaaagataaaataaagttaaattgttt 39567892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 303
Target Start/End: Original strand, 43511112 - 43511150
Alignment:
Q  265 gagagcttatgaaaataagctgaaaccagcttatgaaca 303  Q
    |||| |||||||||||||||||||| |||||||||||||    
T  43511112 gagaacttatgaaaataagctgaaaacagcttatgaaca 43511150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 305
Target Start/End: Complemental strand, 43529903 - 43529861
Alignment:
Q  263 tagagagcttatgaaaataagctgaaaccagcttatgaacatg 305  Q
    |||||||||||||||||||| ||||||  ||||||||||||||    
T  43529903 tagagagcttatgaaaataaactgaaaatagcttatgaacatg 43529861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 306
Target Start/End: Complemental strand, 43911067 - 43911001
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    |||||||||||||  | ||||||| || ||||| ||| |||||||||||| || |||||||||||||    
T  43911067 taagttgttttcaaaagctatcttggaaagcttgtgataataagctgaaaacaacttatgaacatgt 43911001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 306
Target Start/End: Original strand, 5781688 - 5781737
Alignment:
Q  257 ctatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    ||||| ||||||||||||| ||||||||||||| ||| ||||| ||||||    
T  5781688 ctatcatagagagcttatggaaataagctgaaaacagtttatgcacatgt 5781737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 303
Target Start/End: Original strand, 9395158 - 9395195
Alignment:
Q  266 agagcttatgaaaataagctgaaaccagcttatgaaca 303  Q
    |||||||||||||||||||||||| |||||||| ||||    
T  9395158 agagcttatgaaaataagctgaaaacagcttataaaca 9395195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 306
Target Start/End: Complemental strand, 10198531 - 10198482
Alignment:
Q  257 ctatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    ||||| ||||||| ||||| ||||||||||| | ||||||||||||||||    
T  10198531 ctatcctagagagattatggaaataagctgacaacagcttatgaacatgt 10198482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 299
Target Start/End: Original strand, 16503372 - 16503413
Alignment:
Q  258 tatcttagagagcttatgaaaataagctgaaaccagcttatg 299  Q
    |||||| ||||| ||||||||||||||||||||| |||||||    
T  16503372 tatcttggagaggttatgaaaataagctgaaaccggcttatg 16503413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 307
Target Start/End: Original strand, 24097813 - 24097878
Alignment:
Q  243 gttgttttcatgaactatcttagagagcttatgaaaataagctg-aaaccagcttatgaacatgtt 307  Q
    ||||||||||| |  |||| | |||||||||||||||||||||| ||||||||| ||| |||||||    
T  24097813 gttgttttcataagttatcctggagagcttatgaaaataagctgaaaaccagctcatggacatgtt 24097878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 289
Target Start/End: Original strand, 32634337 - 32634386
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaa 289  Q
    |||||||||||||| | |||| | ||| ||||||||||||||||||||||    
T  32634337 taagttgttttcataagctatatcagaaagcttatgaaaataagctgaaa 32634386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 306
Target Start/End: Complemental strand, 41809296 - 41809247
Alignment:
Q  257 ctatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    |||||||||| |||||||| ||||||||| ||| || |||||||||||||    
T  41809296 ctatcttagaaagcttatggaaataagctaaaaacaacttatgaacatgt 41809247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 289
Target Start/End: Original strand, 45229517 - 45229562
Alignment:
Q  244 ttgttttcatgaactatcttagagagcttatgaaaataagctgaaa 289  Q
    |||||||||| | ||||||| |||| ||||||||||||||||||||    
T  45229517 ttgttttcataagctatcttcgagaacttatgaaaataagctgaaa 45229562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 258 - 306
Target Start/End: Original strand, 5133792 - 5133840
Alignment:
Q  258 tatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    ||||| |||||||||||| |||||||||||||  ||||||||| |||||    
T  5133792 tatctaagagagcttatggaaataagctgaaagtagcttatgaccatgt 5133840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 266 - 306
Target Start/End: Complemental strand, 8820334 - 8820294
Alignment:
Q  266 agagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    |||||||||| ||||||||||||| |||||| |||||||||    
T  8820334 agagcttatggaaataagctgaaaacagcttgtgaacatgt 8820294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 304
Target Start/End: Complemental strand, 10884589 - 10884525
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacat 304  Q
    |||| ||||||||| | ||||| ||||||||||||||||||||| ||| | | ||||||| ||||    
T  10884589 taagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacat 10884525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 283
Target Start/End: Complemental strand, 41216770 - 41216710
Alignment:
Q  223 gttaaattgtttttgtttaagttgttttcatgaactatcttagagagcttatgaaaataag 283  Q
    |||||||| ||||| | ||||||| ||| || |||||| ||||||||||||| ||||||||    
T  41216770 gttaaattatttttatataagttgattttataaactattttagagagcttatcaaaataag 41216710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 288
Target Start/End: Original strand, 44644280 - 44644328
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaa 288  Q
    |||| ||||||||  |||||||||  |||||||||||||||||||||||    
T  44644280 taagctgttttcaaaaactatcttgaagagcttatgaaaataagctgaa 44644328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 5e-16; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 142 - 289
Target Start/End: Original strand, 264268 - 264414
Alignment:
Q  142 taatttgaaacttatagcataagtgattatgatgataagcgcttatgcataagctatttctttgacagaagataaaagcaagttaaattgtttttgttta 241  Q
    ||||||| | ||||||||| ||||| |||| |||||||| ||||||  |||||||||||||    || |||||||||  ||||||||| ||||| || ||    
T  264268 taatttgcagcttatagcacaagtgcttatcatgataagtgcttatatataagctatttctaaagcaaaagataaaataaagttaaatcgttttcgtcta 264367  T
Q  242 agttgttttcatgaactatcttagagagcttatgaaaataagctgaaa 289  Q
    || | ||||||| | ||||||| |||| ||||||||||||| ||||||    
T  264368 agctattttcat-agctatcttggagaacttatgaaaataaactgaaa 264414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 245 - 306
Target Start/End: Original strand, 6647394 - 6647455
Alignment:
Q  245 tgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    ||||||||| | ||||||||||||||||||||||||||| ||||| || |||||||||||||    
T  6647394 tgttttcataagctatcttagagagcttatgaaaataagttgaaaacatcttatgaacatgt 6647455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 168 - 303
Target Start/End: Complemental strand, 9093703 - 9093561
Alignment:
Q  168 ttatgatgataagcgcttatgcataagctatttctttgacagaagataaaagcaagttaaattgtttttg-------tttaagttgttttcatgaactat 260  Q
    |||| |||||||||||||||| ||||||||||||| |  || |||||||||  ||||||||||||||| |       | |||| ||||||||| | || |    
T  9093703 ttatcatgataagcgcttatggataagctatttctatatcaaaagataaaataaagttaaattgttttcgtataagctataagctgttttcataagctgt 9093604  T
Q  261 cttagagagcttatgaaaataagctgaaaccagcttatgaaca 303  Q
    |||||||| |||| ||||||||||||||| ||| |||| ||||    
T  9093603 cttagagaacttaagaaaataagctgaaaacaggttattaaca 9093561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 240 - 306
Target Start/End: Original strand, 4420645 - 4420711
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    |||||| ||||| | | ||||||| ||||||||||| ||||||||||||| ||||||||||||||||    
T  4420645 taagttattttcctaagctatcttggagagcttatggaaataagctgaaaacagcttatgaacatgt 4420711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 240 - 306
Target Start/End: Complemental strand, 20368248 - 20368182
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    |||||||||||||| | || |||| |||| |||||||||||||| |||||| |||||||||||||||    
T  20368248 taagttgttttcataagctttcttggagaacttatgaaaataagttgaaactagcttatgaacatgt 20368182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 306
Target Start/End: Original strand, 3528811 - 3528871
Alignment:
Q  246 gttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    |||||||||||||||||| ||||||||||||||||||| ||||| ||  ||||| ||||||    
T  3528811 gttttcatgaactatcttggagagcttatgaaaataagatgaaaacaagttatggacatgt 3528871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 176 - 308
Target Start/End: Complemental strand, 32386238 - 32386106
Alignment:
Q  176 ataagcgcttatgcataagctatttctttgacagaagataaaagcaagttaaattgtttttgtttaagttgttttcatgaactatcttagagagcttatg 275  Q
    ||||| ||||||| ||||||||||||  | | | |||||||||  |||| ||| ||||||| | |||| ||||||||| |  |||| | || ||||||||    
T  32386238 ataagtgcttatgtataagctatttcacttagaaaagataaaataaagtaaaactgtttttatataagctgttttcattagttatcctggaaagcttatg 32386139  T
Q  276 aaaataagctgaaaccagcttatgaacatgttg 308  Q
    ||| |||||||||| || |||||| ||||||||    
T  32386138 aaagtaagctgaaaacaacttatggacatgttg 32386106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 306
Target Start/End: Original strand, 2112202 - 2112268
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    |||||||||||||| ||||||||||||| ||||||  |||||| | |||| || |||||||||||||    
T  2112202 taagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgt 2112268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 266 - 307
Target Start/End: Complemental strand, 28641791 - 28641750
Alignment:
Q  266 agagcttatgaaaataagctgaaaccagcttatgaacatgtt 307  Q
    |||||||||||||||||||| ||| |||||||||||||||||    
T  28641791 agagcttatgaaaataagctaaaaacagcttatgaacatgtt 28641750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 240 - 285
Target Start/End: Complemental strand, 31812081 - 31812036
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagct 285  Q
    |||||||||||||| | ||||||| |||||||||||||||||||||    
T  31812081 taagttgttttcataagctatcttggagagcttatgaaaataagct 31812036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 306
Target Start/End: Original strand, 13908491 - 13908531
Alignment:
Q  266 agagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    |||||||||||||||||||||||| ||||||| ||||||||    
T  13908491 agagcttatgaaaataagctgaaaacagcttacgaacatgt 13908531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 246 - 289
Target Start/End: Original strand, 1497989 - 1498032
Alignment:
Q  246 gttttcatgaactatcttagagagcttatgaaaataagctgaaa 289  Q
    |||||||| ||||||||| ||||||||||||||||||| |||||    
T  1497989 gttttcataaactatcttggagagcttatgaaaataaggtgaaa 1498032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 297
Target Start/End: Original strand, 323597 - 323631
Alignment:
Q  263 tagagagcttatgaaaataagctgaaaccagctta 297  Q
    ||||||||||||||||||||||||||| |||||||    
T  323597 tagagagcttatgaaaataagctgaaaacagctta 323631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 306
Target Start/End: Original strand, 821833 - 821867
Alignment:
Q  272 tatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    |||||||||||||||||| ||||||||||||||||    
T  821833 tatgaaaataagctgaaaacagcttatgaacatgt 821867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 306
Target Start/End: Original strand, 31624092 - 31624158
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    |||| |||||||||   ||||||| ||||  ||||||||||||| ||||| ||||||||||||||||    
T  31624092 taagctgttttcataggctatcttggagaaattatgaaaataagttgaaaacagcttatgaacatgt 31624158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 289
Target Start/End: Complemental strand, 837284 - 837235
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaa 289  Q
    ||||| |||||||| | ||||||| |||| ||||||||||||||||||||    
T  837284 taagtagttttcattagctatcttggagaacttatgaaaataagctgaaa 837235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 289
Target Start/End: Original strand, 26694884 - 26694929
Alignment:
Q  244 ttgttttcatgaactatcttagagagcttatgaaaataagctgaaa 289  Q
    |||||||||| |||||||||  ||| ||||||||||||||||||||    
T  26694884 ttgttttcataaactatcttgaagaacttatgaaaataagctgaaa 26694929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 289
Target Start/End: Complemental strand, 31671142 - 31671093
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaa 289  Q
    |||| ||||||| | ||||||| |||| ||||||||||||||||||||||    
T  31671142 taagctgttttcgtaaactatcctagatagcttatgaaaataagctgaaa 31671093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 235
Target Start/End: Complemental strand, 32206181 - 32206100
Alignment:
Q  154 tatagcataagtgattatgatgataagcgcttatgcataagctatttctttgacagaagataaaagcaagttaaattgtttt 235  Q
    ||||||||||| | |||| ||||||||| ||||||  |||||||| ||| ||||| ||||| |||  |||||||||| ||||    
T  32206181 tatagcataagcgcttatcatgataagcacttatgtgtaagctatctctatgacaaaagatgaaataaagttaaattatttt 32206100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 270 - 306
Target Start/End: Original strand, 696634 - 696670
Alignment:
Q  270 cttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  696634 cttatgagaataagctgaaaacagcttatgaacatgt 696670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 288
Target Start/End: Complemental strand, 2205654 - 2205610
Alignment:
Q  244 ttgttttcatgaactatcttagagagcttatgaaaataagctgaa 288  Q
    |||||||||| | ||||||| ||||||||||| ||||||||||||    
T  2205654 ttgttttcataagctatcttggagagcttatggaaataagctgaa 2205610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 266 - 306
Target Start/End: Original strand, 6536975 - 6537015
Alignment:
Q  266 agagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    |||||||||| ||||||||||||| || |||||||||||||    
T  6536975 agagcttatggaaataagctgaaaacaacttatgaacatgt 6537015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 266 - 306
Target Start/End: Original strand, 9027606 - 9027646
Alignment:
Q  266 agagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    |||||||||||||||||||||||| || |||||| ||||||    
T  9027606 agagcttatgaaaataagctgaaaacaacttatggacatgt 9027646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 303
Target Start/End: Complemental strand, 9912244 - 9912196
Alignment:
Q  255 aactatcttagagagcttatgaaaataagctgaaaccagcttatgaaca 303  Q
    |||||| || |||| |||||||||||||||| ||| |||||||||||||    
T  9912244 aactatattggagaacttatgaaaataagctcaaaacagcttatgaaca 9912196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 300
Target Start/End: Complemental strand, 34430529 - 34430469
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatga 300  Q
    |||| ||||||||| | ||||||| ||||  |||||||||||||||||||  |||||||||    
T  34430529 taaggtgttttcataagctatcttggagaagttatgaaaataagctgaaaaaagcttatga 34430469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 35069459 - 35069507
Alignment:
Q  152 cttatagcataagtgattatgatgataagcgcttatgcataagctattt 200  Q
    ||||||||| ||| | |||| |||||||| |||||||||||||||||||    
T  35069459 cttatagcacaagcgtttatcatgataagtgcttatgcataagctattt 35069507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 245 - 305
Target Start/End: Original strand, 39907810 - 39907870
Alignment:
Q  245 tgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatg 305  Q
    ||||||||| |||||||||||||| || ||||||||||||||||| ||||| |||||||||    
T  39907810 tgttttcataaactatcttagagaactaatgaaaataagctgaaaacagctaatgaacatg 39907870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 305
Target Start/End: Complemental strand, 15075153 - 15075088
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatg 305  Q
    |||||| ||||||| ||||| ||||||||||||||| ||||||||| ||| ||||||||| |||||    
T  15075153 taagttattttcataaactaccttagagagcttatggaaataagctaaaaacagcttatgtacatg 15075088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 289
Target Start/End: Complemental strand, 20881704 - 20881655
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaa 289  Q
    |||||||||||||| |||||||||| ||| ||||||||||||||||||||    
T  20881704 taagttgttttcataaactatcttaaagaacttatgaaaataagctgaaa 20881655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 307
Target Start/End: Original strand, 38010716 - 38010783
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgtt 307  Q
    |||| ||||||||| | ||||| |||||| |||||| ||||||||| ||| |||||||||||||||||    
T  38010716 taagctgttttcataatctatcctagagaacttatggaaataagctaaaaacagcttatgaacatgtt 38010783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 303
Target Start/End: Original strand, 39967922 - 39967985
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaaca 303  Q
    |||||||||||||| | |||||| ||||| || ||||||||||| ||||| |||||||||||||    
T  39967922 taagttgttttcataagctatctgagagaactaatgaaaataagttgaaaacagcttatgaaca 39967985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 286
Target Start/End: Complemental strand, 48917415 - 48917368
Alignment:
Q  239 ttaagttgttttcatgaactatcttagagagcttatgaaaataagctg 286  Q
    ||||||||||||||| | ||||||| ||||||||||||||||||||||    
T  48917415 ttaagttgttttcataagctatcttggagagcttatgaaaataagctg 48917368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 290
Target Start/End: Complemental strand, 2012675 - 2012633
Alignment:
Q  248 tttcatgaactatcttagagagcttatgaaaataagctgaaac 290  Q
    |||||| ||||||||||||||||||||| ||||||||||||||    
T  2012675 tttcataaactatcttagagagcttatggaaataagctgaaac 2012633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 306
Target Start/End: Complemental strand, 44151548 - 44151482
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    |||||||||||||| |||||||||  | |||||||| ||||||||||||| || |||||| ||||||    
T  44151548 taagttgttttcataaactatcttgaaaagcttatggaaataagctgaaaacatcttatggacatgt 44151482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 202
Target Start/End: Complemental strand, 44777145 - 44777095
Alignment:
Q  152 cttatagcataagtgattatgatgataagcgcttatgcataagctatttct 202  Q
    ||||||||||||||| |||| ||||||||| ||||||||||| ||||||||    
T  44777145 cttatagcataagtgtttatcatgataagcacttatgcataaactatttct 44777095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 302
Target Start/End: Original strand, 529382 - 529439
Alignment:
Q  245 tgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaac 302  Q
    ||||||||| | ||||||| ||||||||||||||||| | ||||| ||||||||||||    
T  529382 tgttttcataagctatcttggagagcttatgaaaatatgttgaaaacagcttatgaac 529439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 306
Target Start/End: Original strand, 7244687 - 7244748
Alignment:
Q  245 tgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    ||||||||| | |||| || ||||||||||||||||||||||||| || ||||||| |||||    
T  7244687 tgttttcataagctatattggagagcttatgaaaataagctgaaaacaacttatgagcatgt 7244748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 298
Target Start/End: Complemental strand, 22283807 - 22283754
Alignment:
Q  245 tgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttat 298  Q
    ||||||||| ||| |||||||||| |||||| ||||||||||||| ||||||||    
T  22283807 tgttttcataaaccatcttagagaacttatggaaataagctgaaaacagcttat 22283754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 247 - 306
Target Start/End: Complemental strand, 6552353 - 6552294
Alignment:
Q  247 ttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    ||||||| ||||||| |  |||| ||||||||||||||||||| ||||||||||| ||||    
T  6552353 ttttcataaactatcatgcagagtttatgaaaataagctgaaaacagcttatgaatatgt 6552294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 245 - 300
Target Start/End: Complemental strand, 27378891 - 27378836
Alignment:
Q  245 tgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatga 300  Q
    ||||||||| ||||||| | |||||||||||||||||| |||||| || |||||||    
T  27378891 tgttttcataaactatcctggagagcttatgaaaataaactgaaaacaacttatga 27378836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 306
Target Start/End: Complemental strand, 3610808 - 3610742
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    |||||||||||| | ||||||| ||||||||||||  |||||||||||||   ||||||| ||||||    
T  3610808 taagttgttttcgtaaactatcctagagagcttatagaaataagctgaaaaaggcttatggacatgt 3610742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 306
Target Start/End: Complemental strand, 24363669 - 24363603
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    |||||||||||||| | ||||| | ||||| ||||| ||||||||||||| || |||||| ||||||    
T  24363669 taagttgttttcataagctatcctggagaggttatggaaataagctgaaaacaacttatggacatgt 24363603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 282
Target Start/End: Complemental strand, 30456518 - 30456476
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataa 282  Q
    ||||| |||||||| ||||||||| ||||||||||||||||||    
T  30456518 taagtggttttcataaactatcttggagagcttatgaaaataa 30456476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 305
Target Start/End: Original strand, 30553343 - 30553409
Alignment:
Q  240 taagttgttttcatgaactatcttagagagctt-atgaaaataagctgaaaccagcttatgaacatg 305  Q
    |||||||||||||||| |||| ||   |||||| ||||||||||| ||||| |||||||||||||||    
T  30553343 taagttgttttcatgagctattttgttgagctttatgaaaataaggtgaaaacagcttatgaacatg 30553409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 289
Target Start/End: Original strand, 7521274 - 7521323
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaa 289  Q
    |||| |||||| || ||||||| |||||||||| ||||||||||||||||    
T  7521274 taagctgttttaataaactatcctagagagcttctgaaaataagctgaaa 7521323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 301
Target Start/End: Complemental strand, 26935712 - 26935564
Alignment:
Q  152 cttatagcataagtgattatgatgataagcgcttatgcataagctatttctttgacagaagataaaagcaagttaaattgtttttgtttaagttgttttc 251  Q
    |||||| |||||| |||||| || ||||| |||| ||  |||||||||| | | ||| | |||||||  | |||||||||||||  | | || | |||||    
T  26935712 cttataccataagagattatcat-ataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctattttc 26935614  T
Q  252 atgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaa 301  Q
    || | ||||  || |||||||||| ||||||||||||| |||||||||||    
T  26935613 ataatctattctaaagagcttatggaaataagctgaaaacagcttatgaa 26935564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 289
Target Start/End: Complemental strand, 27863793 - 27863744
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaa 289  Q
    ||||||||||| || |||||| ||||||| |||||||| |||||||||||    
T  27863793 taagttgttttaataaactatattagagaacttatgaacataagctgaaa 27863744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 245
Target Start/End: Complemental strand, 28613665 - 28613604
Alignment:
Q  184 ttatgcataagctatttctttgacagaagataaaagcaagttaaattgtttttgtttaagtt 245  Q
    ||||| ||||||||||| | | ||| |||||||||  |||||||||||||||||| ||||||    
T  28613665 ttatgtataagctatttttataacaaaagataaaacaaagttaaattgtttttgtataagtt 28613604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 306
Target Start/End: Original strand, 35007617 - 35007665
Alignment:
Q  257 ctatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    ||||||| |||||||| |||||||||||||||| || |||||||||||||    
T  35007617 ctatctttgagagctt-tgaaaataagctgaaaacaacttatgaacatgt 35007665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 304
Target Start/End: Complemental strand, 2825299 - 2825235
Alignment:
Q  240 taagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaacat 304  Q
    |||||||||||||  | ||||| |||||| |||||| |||||||||||||  | |||||||||||    
T  2825299 taagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 2825235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 289
Target Start/End: Original strand, 9050642 - 9050686
Alignment:
Q  245 tgttttcatgaactatcttagagagcttatgaaaataagctgaaa 289  Q
    ||||||||| ||||||||| |||| ||| ||||||||||||||||    
T  9050642 tgttttcataaactatcttggagaacttgtgaaaataagctgaaa 9050686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 270 - 306
Target Start/End: Original strand, 11048059 - 11048095
Alignment:
Q  270 cttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  11048059 cttatgagaataagctgaaaacagcttatgaacatgt 11048095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 196
Target Start/End: Complemental strand, 21568801 - 21568757
Alignment:
Q  152 cttatagcataagtgattatgatgataagcgcttatgcataagct 196  Q
    ||||||||||||||| |||| ||||||||| |||||| |||||||    
T  21568801 cttatagcataagtgcttatcatgataagcacttatgtataagct 21568757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 284
Target Start/End: Complemental strand, 33552914 - 33552874
Alignment:
Q  244 ttgttttcatgaactatcttagagagcttatgaaaataagc 284  Q
    |||||||||| | |||||||||||| |||||||||||||||    
T  33552914 ttgttttcataagctatcttagagaacttatgaaaataagc 33552874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 303
Target Start/End: Original strand, 34035918 - 34035982
Alignment:
Q  239 ttaagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatgaaca 303  Q
    |||| |||||||||| | |||||||||||| |||  ||||||||| ||||| || ||||||||||    
T  34035918 ttaaattgttttcataagctatcttagagaacttgcgaaaataagttgaaaacaacttatgaaca 34035982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 270 - 306
Target Start/End: Complemental strand, 43219682 - 43219646
Alignment:
Q  270 cttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  43219682 cttatgagaataagctgaaaacagcttatgaacatgt 43219646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 299
Target Start/End: Original strand, 306329 - 306387
Alignment:
Q  241 aagttgttttcatgaactatcttagagagcttatgaaaataagctgaaaccagcttatg 299  Q
    ||||||||||||| | ||||| ||||||||||||| || |||||||||| |||||||||    
T  306329 aagttgttttcataagctatcctagagagcttatgtaagtaagctgaaaacagcttatg 306387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 173 - 282
Target Start/End: Complemental strand, 21420 - 21311
Alignment:
Q  173 atgataagcgcttatgcataagctatttctttgacagaagataaaagcaagttaaattgtttttgtttaagttgttttcatgaactatcttagagagctt 272  Q
    ||||||||| |||||| ||||||||||| | |   | |||||||||  ||||||||||||||| || |||| ||||||||| | |||| || ||||  ||    
T  21420 atgataagcacttatgtataagctatttttataggaaaagataaaataaagttaaattgttttcgtataagctgttttcataagctatattggagaaatt 21321  T
Q  273 atgaaaataa 282  Q
    ||||||||||    
T  21320 atgaaaataa 21311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 306
Target Start/End: Original strand, 27020 - 27069
Alignment:
Q  257 ctatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 306  Q
    ||||| ||||||||||||| ||||||||||||| ||| ||||| ||||||    
T  27020 ctatcatagagagcttatggaaataagctgaaaacagtttatgcacatgt 27069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University