View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17434_low_40 (Length: 303)
Name: NF17434_low_40
Description: NF17434
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17434_low_40 |
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Alignment Details
Target: chr5 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 173 - 293
Target Start/End: Original strand, 39185319 - 39185439
Alignment:
| Q |
173 |
agcaatagcagcaagtctcagagacccaacagaacgatataaaccccaatcctaagagtcccaaactcgaattcgaagatacaacaacgaatctgaaaca |
272 |
Q |
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| T |
39185319 |
agcaatagcagcaagtctcagagacccaacagaacgatagaaaccccaatcctaagagacccaaactcgaattcaaagatacaacaacgaatctgaaaca |
39185418 |
T |
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| Q |
273 |
aaaacacaaaccacaggttct |
293 |
Q |
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|||||||||| |||||||||| |
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| T |
39185419 |
aaaacacaaaacacaggttct |
39185439 |
T |
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