View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17434_low_55 (Length: 254)
Name: NF17434_low_55
Description: NF17434
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17434_low_55 |
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Alignment Details
Target: chr4 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 47654062 - 47653823
Alignment:
| Q |
1 |
tgagtcttctcttgtatatatccgacattaaattcattcatatgttgatacgagactaatcactcacacttgaagtcaacaatcttccctcaagtgtgga |
100 |
Q |
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|||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47654062 |
tgagtcttctcttgcatatatctgacattaaattcattcatatgttgatacgagactaatcactcacacttgaagtcaacaatcttccctcaagtgtgga |
47653963 |
T |
|
| Q |
101 |
gctatatccaatacttgcatcaccattattaccggcataataacatgtctcctgactacactaacatgaagacttttgtagcaagtccaaacattgagat |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47653962 |
cctatatccaatacttgcatcaccattattaccggcataataacatgtcttctgactacactaacatgaagacttttgtagcaagtccaaacattgagat |
47653863 |
T |
|
| Q |
201 |
attcaatttcgctctctcaccaattaaaacttggcctttg |
240 |
Q |
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||||| |||||||||||| ||||||||||||||||||||| |
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| T |
47653862 |
attcactttcgctctctcgccaattaaaacttggcctttg |
47653823 |
T |
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