View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17434_low_66 (Length: 225)
Name: NF17434_low_66
Description: NF17434
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17434_low_66 |
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Alignment Details
Target: chr2 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 10 - 209
Target Start/End: Complemental strand, 42072340 - 42072141
Alignment:
| Q |
10 |
agataatactatatgcgcagtggaatgtttttgttgaggattgaaataagagaagaagaacaagatggaagaacaagtggtattcaacggttggatttga |
109 |
Q |
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| T |
42072340 |
agataataatatatgtgcagtggaatgtttttgttgaggattgaaataagagaagaagaacaagatggaagaacaagtggtattcaacggttagatttga |
42072241 |
T |
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| Q |
110 |
ttttgtgtgtatggttagattgtgatgtttgagaaacaagacatgaaatgaggaatggaaaagaaaacgtcacatcttaatcctaacgagctttgtctct |
209 |
Q |
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| T |
42072240 |
ttttgtgtgtatggttagattgtgatgtttgagaaacaagacatgaaatgaggaatggaaaagaaaacgtcacatcttaatcctaacgagctttgtctct |
42072141 |
T |
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