View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17435_high_24 (Length: 217)
Name: NF17435_high_24
Description: NF17435
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17435_high_24 |
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Alignment Details
Target: chr1 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 15 - 199
Target Start/End: Original strand, 28741295 - 28741479
Alignment:
| Q |
15 |
gaagagggtgacttttttgttccagcatcaacttttctttttaaggaattcaatggtgatttgctaatattactggataggttgctgctggaagatgggg |
114 |
Q |
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| T |
28741295 |
gaagagggtgacttttttgttccagcatcaacttttctttttaaggaattcaatggtgatttgctaatattactggataggttgctgctggaagatgggg |
28741394 |
T |
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| Q |
115 |
aaattgttgattttgtttttgtagcaactgatagacctaatggggatttggatgatgtgatgggttgaagtccattaacttgaga |
199 |
Q |
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| T |
28741395 |
aaattgttgattttgtttttgtagcaactgatagacctaatggggatttggatgatgtgatgggttgaagtccattaacttgaga |
28741479 |
T |
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