View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17436_high_4 (Length: 425)

Name: NF17436_high_4
Description: NF17436
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17436_high_4
NF17436_high_4
[»] chr8 (13 HSPs)
chr8 (20-419)||(2797187-2797564)
chr8 (20-271)||(3160248-3160498)
chr8 (20-271)||(2889231-2889479)
chr8 (20-271)||(2874557-2874803)
chr8 (20-236)||(3145418-3145631)
chr8 (287-419)||(2874916-2875048)
chr8 (20-128)||(2848845-2848953)
chr8 (291-381)||(3160074-3160164)
chr8 (20-260)||(4416821-4417058)
chr8 (285-381)||(2889554-2889650)
chr8 (73-202)||(39188071-39188196)
chr8 (271-369)||(15131764-15131862)
chr8 (371-419)||(15020914-15020962)
[»] chr2 (2 HSPs)
chr2 (298-377)||(41849256-41849335)
chr2 (271-369)||(32200640-32200737)
[»] chr7 (4 HSPs)
chr7 (286-343)||(11816755-11816812)
chr7 (33-94)||(43313464-43313525)
chr7 (285-341)||(11820349-11820405)
chr7 (375-419)||(32776131-32776175)
[»] chr4 (3 HSPs)
chr4 (33-94)||(34743805-34743866)
chr4 (372-419)||(41594760-41594807)
chr4 (366-410)||(41436366-41436410)
[»] chr3 (3 HSPs)
chr3 (33-94)||(21531616-21531677)
chr3 (33-94)||(35167557-35167618)
chr3 (175-211)||(47659619-47659655)
[»] chr5 (1 HSPs)
chr5 (286-369)||(41815420-41815503)


Alignment Details
Target: chr8 (Bit Score: 291; Significance: 1e-163; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 20 - 419
Target Start/End: Complemental strand, 2797564 - 2797187
Alignment:
Q  20 cctgcattacagtttcagtttcagaaaagatagctgatagaacccgcagaatgaacaaggtaattttgtatattactatcaaatgataaatatgaatgta 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  2797564 cctgcattacagtttcagtttcagaaaagatagctgatagaacccgcagaatgaacaaggtaattttgtatattaccatcaaatgataaatatgaatgta 2797465  T
Q  120 gaggctctaaaagggtggaataacagaatgaaagagataaaccagagtcactatgctcctaaagagagcactatgctcctaactagagagaaactctagt 219  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||                    |||||||||||||||||||||||||||    
T  2797464 gaggctctaaa-gggtggaataacagaatgaaagagataaaccagagtcacta--------------------tgctcctaactagagagaaactctagt 2797386  T
Q  220 aaccaactctaataatacatcataatgccttctccactacccatcccctctcgtgtcgcggtgtccgacacgtgtcagacaagtgtactaaataaatgat 319  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |    
T  2797385 aaccaaatctaataatacatcagaatgccttctccactacccatcccctctcgtgtcgtggtgtccgacacgtgtcagacaagtgtactaaataaatggt 2797286  T
Q  320 tttctcctttattttgacactccttggactggtgtccaaaacctatataaaacttatactccctccgtcccattataaatgagctttttgttcatatcac 419  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  2797285 tttctcctttattttgacactccttggactggtgtccaaaacctat-taaaacttatactccctccgtccaattataaatgagctttttgttcatttcac 2797187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 20 - 271
Target Start/End: Complemental strand, 3160498 - 3160248
Alignment:
Q  20 cctgcattacagtttcagtttcagaaaagatagctgatagaacccgcagaatgaacaaggtaattttgtatattactatcaaatgataaatatgaatgta 119  Q
    |||| ||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  3160498 cctgtattacggtttcagtttcagaaaagatacctgatagaacctgcagaatgaacaaggtaattttgtatattactatcaaatgataaatatgagtgta 3160399  T
Q  120 gaggctctaaaagggtggaataacagaatgaaagagataaaccagagtcactatgctcctaaagagagcactatgctcctaactagagagaaactctagt 219  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||  |  |||||||||||||||||||||||||||||||||||||||||||||    
T  3160398 gaggctctacaagggtggaataacagaatgaaagagataaaccagagtca-aagactcctaaagagagcactatgctcctaactagagagaaactctagt 3160300  T
Q  220 aaccaactctaataatacatcataatgccttctccactacccatcccctctc 271  Q
    ||||||||| |||||||| ||| |||||||||||||||||||||||||||||    
T  3160299 aaccaactccaataatacttcagaatgccttctccactacccatcccctctc 3160248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 20 - 271
Target Start/End: Original strand, 2889231 - 2889479
Alignment:
Q  20 cctgcattacagtttcagtttcagaaaagatagctgatagaacccgcagaatgaacaaggtaattttgtatattactatcaaatgataaatatgaatgta 119  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  2889231 cctgcattacggtttcagtttcagaaaagatacctgatagaacccgcagaatgaacaaggtaattttgtatattactatcaaatgataaatatgagtgta 2889330  T
Q  120 gaggctctaaaagggtggaataacagaatgaaagagataaaccagagtcactatgctcctaaagagagcactatgctcctaactagagagaaactctagt 219  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||  |  |||||||||||||||||||||||||||||  ||||||||||||||    
T  2889331 gaggctctacaagggtggaataacagaatgaaatagataaaccagagtca-aagactcctaaagagagcactatgctcctaact--agagaaactctagt 2889427  T
Q  220 aaccaactctaataatacatcataatgccttctccactacccatcccctctc 271  Q
    |||||||||||| ||||| ||| |||||||||||||||||||||||||||||    
T  2889428 aaccaactctaacaatacttcagaatgccttctccactacccatcccctctc 2889479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 20 - 271
Target Start/End: Original strand, 2874557 - 2874803
Alignment:
Q  20 cctgcattacagtttcagtttcagaaaagatagctgatagaacccgcagaatgaacaaggtaattttgtatattactatcaaatgataaatatgaatgta 119  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||    
T  2874557 cctgcattacggtttcagtttcagaaaagatacctgatagaacccgcagaatgaacaaggtaattttgtatattacgatcaaatgataaatatgagcgta 2874656  T
Q  120 gaggctctaaaagggtggaataacagaatgaaagagataaaccagagtcactatgctcctaaagagagcactatgctcctaactagagagaaactctagt 219  Q
    |||||| || ||||||||||||||||||||  ||||||||||||||||||  |  ||||||||||||||||||||||| |||||  || ||| |||||||    
T  2874657 gaggctatacaagggtggaataacagaatg--agagataaaccagagtca-aagactcctaaagagagcactatgctcataact--agcgaagctctagt 2874751  T
Q  220 aaccaactctaataatacatcataatgccttctccactacccatcccctctc 271  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  2874752 aaccaactctaataatacatcagaatgccttctccactatccatcccctctc 2874803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 20 - 236
Target Start/End: Complemental strand, 3145631 - 3145418
Alignment:
Q  20 cctgcattacagtttcagtttcagaaaagatagctgatagaacccgcagaatgaacaaggtaattttgtatattactatcaaatgataaatatgaatgta 119  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  3145631 cctgcattacggtttcagtttcagaaaagatacctgatagaacccgcagaatgaacaaggtaattttgtatattactatcaaatgataaatatgagtgta 3145532  T
Q  120 gaggctctaaaagggtggaataacagaatgaaagagataaaccagagtcactatgctcctaaagagagcactatgctcctaactagagagaaactctagt 219  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||  |  |||||||||||||||||||||||||||||  ||||||||||||||    
T  3145531 gaggctctacaagggtggaataacagaatgaaatagataaaccagagtca-aagactcctaaagagagcactatgctcctaact--agagaaactctagt 3145435  T
Q  220 aaccaactctaataata 236  Q
    |||||||||||| ||||    
T  3145434 aaccaactctaacaata 3145418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 287 - 419
Target Start/End: Original strand, 2874916 - 2875048
Alignment:
Q  287 acacgtgtcagacaagtgtactaaataaatgattttctcctttattttgacactccttggactggtgtccaaaacctatataaaacttatactccctccg 386  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  2874916 acacgtgtcagacaagtgtactaaataaatggttttcttctttattttgacactccttggactggtgtccaacacctatataaaacttatactccctccg 2875015  T
Q  387 tcccattataaatgagctttttgttcatatcac 419  Q
    ||||||||||||| |||||||||||||| ||||    
T  2875016 tcccattataaataagctttttgttcatttcac 2875048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 20 - 128
Target Start/End: Original strand, 2848845 - 2848953
Alignment:
Q  20 cctgcattacagtttcagtttcagaaaagatagctgatagaacccgcagaatgaacaaggtaattttgtatattactatcaaatgataaatatgaatgta 119  Q
    |||||||||| ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  2848845 cctgcattacggtttcagtttcagaaaagataccggatagaacccgcagaatgaacaaggtaattttgtatattactatcaaatgataaatatgagtgta 2848944  T
Q  120 gaggctcta 128  Q
    |||||||||    
T  2848945 gaggctcta 2848953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 291 - 381
Target Start/End: Complemental strand, 3160164 - 3160074
Alignment:
Q  291 gtgtcagacaagtgtactaaataaatgattttctcctttattttgacactccttggactggtgtccaaaacctatataaaacttatactcc 381  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  3160164 gtgtccgacaagtgtactaaataaatgtttttctcctttattttgacactccttggactggtgcccaacacctatataaaacttatactcc 3160074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 20 - 260
Target Start/End: Complemental strand, 4417058 - 4416821
Alignment:
Q  20 cctgcattacagtttcagtttcagaaaagatagctgatagaacccgcagaatgaacaaggtaattttgtatattactatcaaatgataaatatgaatgta 119  Q
    |||| |||||||||||||||||||||||||||  ||||||||| | || ||| |||| ||||||||||||||| |  |  ||| |||||| ||||  | |    
T  4417058 cctgtattacagtttcagtttcagaaaagatacatgatagaacacacaaaatcaacatggtaattttgtatatcaaca--aaacgataaagatgagcgca 4416961  T
Q  120 gaggctctaaaagggtggaataacagaatgaaagagataaaccagagtcactatgctcctaaagagagcactatgctcctaactagagagaaactctagt 219  Q
    ||||||||| || | |||||||||| ||||||||||||||||||| ||| | |  |||||||| |||||||| | |||||||| |||||||||||||       
T  4416960 gaggctctacaacgctggaataacaaaatgaaagagataaaccagggtc-caagactcctaaacagagcactctactcctaaccagagagaaactctccc 4416862  T
Q  220 aaccaactctaataatacatcataatgccttctccactacc 260  Q
    | |||| ||||| ||||  ||  ||||||||||||||||||    
T  4416861 agccaattctaacaatatctcggaatgccttctccactacc 4416821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 285 - 381
Target Start/End: Original strand, 2889554 - 2889650
Alignment:
Q  285 cgacacgtgtcagacaagtgtactaaataaatgattttctcctttattttgacactccttggactggtgtccaaaacctatataaaacttatactcc 381  Q
    |||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||  |||| |||| |||||||||||||||||    
T  2889554 cgacacttgtcagacaagtgtactaaataaatatttttctcctttattttgacactccttggactggtacccaacacctctataaaacttatactcc 2889650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 73 - 202
Target Start/End: Original strand, 39188071 - 39188196
Alignment:
Q  73 aacaaggtaattttgtatattactatcaaatgataaatatgaatgtagaggctctaaaagggtggaataacagaatgaaagagataaaccagagtcacta 172  Q
    ||||||||||| ||||||||||   |||||||||| |||| |  |||||||||| | || |||||||||||| ||| |||||| ||||||| |||||  |    
T  39188071 aacaaggtaatgttgtatatta---tcaaatgatagatattagcgtagaggctccacaatggtggaataacaaaatcaaagaggtaaaccaaagtca-aa 39188166  T
Q  173 tgctcctaaagagagcactatgctcctaac 202  Q
      |||||||| | ||||| |||||||||||    
T  39188167 gactcctaaacaaagcaccatgctcctaac 39188196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 271 - 369
Target Start/End: Original strand, 15131764 - 15131862
Alignment:
Q  271 cgtgtcgcggtgtccgacacgtgtcagacaagtgtactaaataaatgattttctcctttattttgacactccttggactggtgtccaaaacctatataa 369  Q
    |||||||||||||||||||||||||  ||  |||| || ||||| || |||| | ||||| || |||||||||  ||| ||||||| | ||||||||||    
T  15131764 cgtgtcgcggtgtccgacacgtgtcgaaccggtgtcctgaataattgttttttttctttacttcgacactcctacgaccggtgtccgacacctatataa 15131862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 15020962 - 15020914
Alignment:
Q  371 acttatactccctccgtcccattataaatgagctttttgttcatatcac 419  Q
    ||||||||||||||||||||||| ||| ||||| | |||||||| ||||    
T  15020962 acttatactccctccgtcccattttaagtgagcatattgttcatttcac 15020914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 7e-16; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 298 - 377
Target Start/End: Complemental strand, 41849335 - 41849256
Alignment:
Q  298 acaagtgtactaaataaatgattttctcctttattttgacactccttggactggtgtccaaaacctatataaaacttata 377  Q
    |||||||| |||||||| | |||||||  ||||||| |||||||||||||||||||||| | |||||||||| |||||||    
T  41849335 acaagtgtcctaaataagttattttcttttttatttcgacactccttggactggtgtccgacacctatataacacttata 41849256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 271 - 369
Target Start/End: Original strand, 32200640 - 32200737
Alignment:
Q  271 cgtgtcgcggtgtccgacacgtgtcagacaagtgtactaaataaatgattttctcctttattttgacactccttggactggtgtccaaaacctatataa 369  Q
    |||||||||||||||||||||||||  ||  |||| |||||||| ||||||| | ||||| || |||||||||  ||  |||| |||| ||||||||||    
T  32200640 cgtgtcgcggtgtccgacacgtgtcgaactggtgtcctaaataattgatttt-ttctttacttcgacactcctacgatcggtgcccaacacctatataa 32200737  T

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Target: chr7 (Bit Score: 34; Significance: 0.0000000006; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 286 - 343
Target Start/End: Original strand, 11816755 - 11816812
Alignment:
Q  286 gacacgtgtcagacaagtgtactaaataaatgattttctcctttattttgacactcct 343  Q
    |||||||||||||| ||||| |||||||| | ||||||| |||||||| |||||||||    
T  11816755 gacacgtgtcagacgagtgtcctaaataagttattttcttctttatttcgacactcct 11816812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 33 - 94
Target Start/End: Original strand, 43313464 - 43313525
Alignment:
Q  33 ttcagtttcagaaaagatagctgatagaacccgcagaatgaacaaggtaattttgtatatta 94  Q
    |||||||| |||||| |||  |||||||||| ||| |||||||||| |||||||||||||||    
T  43313464 ttcagtttaagaaaatatacatgatagaaccggcaaaatgaacaagctaattttgtatatta 43313525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 341
Target Start/End: Original strand, 11820349 - 11820405
Alignment:
Q  285 cgacacgtgtcagacaagtgtactaaataaatgattttctcctttattttgacactc 341  Q
    ||||||||||||||||||||| |||||||| | ||||||| ||||| |||| |||||    
T  11820349 cgacacgtgtcagacaagtgttctaaataagttattttcttctttactttgtcactc 11820405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 375 - 419
Target Start/End: Complemental strand, 32776175 - 32776131
Alignment:
Q  375 atactccctccgtcccattataaatgagctttttgttcatatcac 419  Q
    ||||||||||||| ||||||||||||||| ||||| |||| ||||    
T  32776175 atactccctccgttccattataaatgagccttttgctcatttcac 32776131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.0000000006; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 33 - 94
Target Start/End: Complemental strand, 34743866 - 34743805
Alignment:
Q  33 ttcagtttcagaaaagatagctgatagaacccgcagaatgaacaaggtaattttgtatatta 94  Q
    |||||||| |||||| |||  |||||||||| ||| |||||||||| |||||||||||||||    
T  34743866 ttcagtttaagaaaatatacatgatagaaccggcaaaatgaacaagctaattttgtatatta 34743805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 419
Target Start/End: Original strand, 41594760 - 41594807
Alignment:
Q  372 cttatactccctccgtcccattataaatgagctttttgttcatatcac 419  Q
    ||||||||||||||||||||||||||  |||| |||||||||| ||||    
T  41594760 cttatactccctccgtcccattataagcgagccttttgttcatttcac 41594807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 410
Target Start/End: Original strand, 41436366 - 41436410
Alignment:
Q  366 ataaaacttatactccctccgtcccattataaatgagctttttgt 410  Q
    |||||| | |||||||||||||||||| |||| ||||||||||||    
T  41436366 ataaaattgatactccctccgtcccataataactgagctttttgt 41436410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000006; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 33 - 94
Target Start/End: Complemental strand, 21531677 - 21531616
Alignment:
Q  33 ttcagtttcagaaaagatagctgatagaacccgcagaatgaacaaggtaattttgtatatta 94  Q
    |||||||| |||||| |||  |||||||||| ||| |||||||||| |||||||||||||||    
T  21531677 ttcagtttaagaaaatatacatgatagaaccggcaaaatgaacaagctaattttgtatatta 21531616  T

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Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 33 - 94
Target Start/End: Complemental strand, 35167618 - 35167557
Alignment:
Q  33 ttcagtttcagaaaagatagctgatagaacccgcagaatgaacaaggtaattttgtatatta 94  Q
    |||||||| |||||| |||  |||||||||| ||| |||||||||| |||||||||||||||    
T  35167618 ttcagtttaagaaaatatacatgatagaaccggcaaaatgaacaagctaattttgtatatta 35167557  T

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Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 211
Target Start/End: Complemental strand, 47659655 - 47659619
Alignment:
Q  175 ctcctaaagagagcactatgctcctaactagagagaa 211  Q
    |||||||| ||||||||||||||||||| ||||||||    
T  47659655 ctcctaaacagagcactatgctcctaaccagagagaa 47659619  T

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Target: chr5 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 369
Target Start/End: Original strand, 41815420 - 41815503
Alignment:
Q  286 gacacgtgtcagacaagtgtactaaata-aatgattttctcctttattttgacactccttggactggtgtccaaaacctatataa 369  Q
    ||||||||||||||||||||  |||||| ||| ||||| ||||||| |  |||||||||| ||| ||||||||| ||||||||||    
T  41815420 gacacgtgtcagacaagtgttttaaatacaattatttt-tcctttactcggacactcctttgaccggtgtccaacacctatataa 41815503  T

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