View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17437_high_10 (Length: 349)

Name: NF17437_high_10
Description: NF17437
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17437_high_10
NF17437_high_10
[»] chr5 (41 HSPs)
chr5 (184-328)||(33137815-33137966)
chr5 (23-81)||(6014835-6014893)
chr5 (20-81)||(29096289-29096350)
chr5 (20-84)||(42455372-42455436)
chr5 (20-81)||(29331296-29331357)
chr5 (20-81)||(32158395-32158456)
chr5 (20-81)||(38618662-38618723)
chr5 (18-78)||(2029112-2029172)
chr5 (20-74)||(20945879-20945933)
chr5 (20-81)||(843349-843410)
chr5 (20-81)||(1244708-1244769)
chr5 (20-81)||(18478056-18478117)
chr5 (20-81)||(19058985-19059046)
chr5 (20-81)||(36226116-36226177)
chr5 (20-80)||(6561951-6562011)
chr5 (20-84)||(20762334-20762398)
chr5 (17-81)||(29841398-29841462)
chr5 (18-81)||(6806621-6806684)
chr5 (34-81)||(9577360-9577407)
chr5 (28-79)||(23925604-23925655)
chr5 (20-74)||(6671774-6671828)
chr5 (20-74)||(8015888-8015942)
chr5 (17-71)||(29629936-29629990)
chr5 (23-81)||(30403806-30403864)
chr5 (32-78)||(43166734-43166780)
chr5 (20-81)||(10943769-10943830)
chr5 (20-81)||(33800946-33801007)
chr5 (20-84)||(2411272-2411336)
chr5 (20-80)||(9963469-9963529)
chr5 (31-79)||(33729842-33729890)
chr5 (30-81)||(18202074-18202125)
chr5 (32-79)||(27219546-27219593)
chr5 (31-81)||(5156961-5157011)
chr5 (18-79)||(17077412-17077475)
chr5 (20-81)||(18872574-18872633)
chr5 (26-84)||(42816620-42816678)
chr5 (20-81)||(13754059-13754120)
chr5 (44-81)||(38307727-38307764)
chr5 (30-78)||(10508643-10508691)
chr5 (53-81)||(29050875-29050903)
chr5 (20-73)||(40384304-40384359)
[»] chr7 (46 HSPs)
chr7 (20-81)||(33202535-33202596)
chr7 (20-81)||(21285334-21285395)
chr7 (20-81)||(34948159-34948220)
chr7 (20-79)||(29658255-29658314)
chr7 (29-81)||(27907877-27907929)
chr7 (29-79)||(22741267-22741317)
chr7 (20-78)||(35368449-35368507)
chr7 (20-81)||(2366410-2366471)
chr7 (24-81)||(22706009-22706066)
chr7 (20-81)||(29710082-29710143)
chr7 (20-81)||(47552266-47552327)
chr7 (20-80)||(30644222-30644282)
chr7 (20-80)||(42887207-42887267)
chr7 (32-84)||(43902514-43902566)
chr7 (17-81)||(45198079-45198143)
chr7 (29-84)||(37129337-37129392)
chr7 (23-81)||(4169132-4169190)
chr7 (23-81)||(14102517-14102575)
chr7 (23-81)||(14412534-14412592)
chr7 (21-79)||(17900862-17900920)
chr7 (20-74)||(33555122-33555176)
chr7 (32-74)||(35890878-35890920)
chr7 (23-77)||(38792268-38792322)
chr7 (28-81)||(8214171-8214224)
chr7 (44-81)||(38025418-38025455)
chr7 (28-81)||(38451924-38451977)
chr7 (28-81)||(4590592-4590647)
chr7 (44-84)||(7262976-7263016)
chr7 (32-79)||(5787526-5787573)
chr7 (30-81)||(22047583-22047634)
chr7 (20-79)||(22965941-22966000)
chr7 (30-81)||(47403569-47403620)
chr7 (19-81)||(3595339-3595401)
chr7 (20-70)||(27957590-27957639)
chr7 (28-74)||(44843752-44843798)
chr7 (28-81)||(2261465-2261518)
chr7 (20-81)||(4042249-4042310)
chr7 (44-81)||(14967614-14967651)
chr7 (44-81)||(15397090-15397127)
chr7 (20-73)||(30152794-30152847)
chr7 (29-74)||(39969031-39969076)
chr7 (20-81)||(45011639-45011700)
chr7 (20-79)||(27454064-27454126)
chr7 (53-81)||(30567287-30567315)
chr7 (17-65)||(31694120-31694168)
chr7 (49-81)||(44437815-44437847)
[»] chr8 (38 HSPs)
chr8 (20-84)||(8740634-8740698)
chr8 (20-78)||(43468689-43468747)
chr8 (20-81)||(14684197-14684258)
chr8 (20-84)||(34073217-34073281)
chr8 (28-79)||(7603798-7603849)
chr8 (30-81)||(39258643-39258694)
chr8 (20-81)||(4798522-4798583)
chr8 (20-81)||(23857304-23857365)
chr8 (20-81)||(24074559-24074620)
chr8 (28-81)||(36359699-36359752)
chr8 (20-84)||(30461589-30461653)
chr8 (20-79)||(15042348-15042407)
chr8 (28-79)||(39484353-39484404)
chr8 (20-78)||(14010756-14010814)
chr8 (32-81)||(7649593-7649642)
chr8 (20-81)||(10184782-10184843)
chr8 (20-73)||(13537300-13537353)
chr8 (20-73)||(13626848-13626901)
chr8 (20-81)||(14683929-14683990)
chr8 (20-81)||(17987430-17987491)
chr8 (20-73)||(33570418-33570471)
chr8 (20-81)||(41125415-41125475)
chr8 (20-81)||(40249859-40249922)
chr8 (20-84)||(44070346-44070410)
chr8 (18-81)||(27558852-27558914)
chr8 (20-79)||(43874960-43875019)
chr8 (31-81)||(3379629-3379679)
chr8 (19-81)||(37154566-37154628)
chr8 (20-73)||(5184876-5184929)
chr8 (20-81)||(8682434-8682495)
chr8 (20-81)||(9525010-9525071)
chr8 (32-81)||(10970331-10970380)
chr8 (20-73)||(14012665-14012718)
chr8 (20-81)||(24608464-24608525)
chr8 (20-81)||(25689369-25689430)
chr8 (29-74)||(26900481-26900526)
chr8 (52-84)||(4354775-4354807)
chr8 (20-79)||(39165033-39165093)
[»] chr6 (39 HSPs)
chr6 (20-84)||(16251501-16251565)
chr6 (20-81)||(3448405-3448466)
chr6 (20-81)||(18904664-18904725)
chr6 (20-81)||(25020509-25020570)
chr6 (20-81)||(12089150-12089211)
chr6 (20-72)||(15288945-15288997)
chr6 (20-79)||(22983633-22983692)
chr6 (20-79)||(23804716-23804775)
chr6 (20-83)||(35190816-35190879)
chr6 (31-81)||(5134415-5134465)
chr6 (19-81)||(12127890-12127952)
chr6 (20-81)||(7720484-7720545)
chr6 (20-79)||(9438355-9438414)
chr6 (18-77)||(19417873-19417932)
chr6 (29-79)||(6530187-6530237)
chr6 (20-78)||(9491719-9491777)
chr6 (31-81)||(19165414-19165464)
chr6 (23-81)||(30566114-30566172)
chr6 (20-81)||(6652262-6652323)
chr6 (23-68)||(11982817-11982862)
chr6 (28-81)||(22389731-22389784)
chr6 (28-84)||(7563554-7563610)
chr6 (20-79)||(17217011-17217072)
chr6 (20-84)||(23771086-23771150)
chr6 (44-83)||(6270588-6270627)
chr6 (32-79)||(18991425-18991471)
chr6 (19-81)||(3591310-3591372)
chr6 (20-66)||(15126295-15126341)
chr6 (28-81)||(2970250-2970303)
chr6 (19-84)||(6296886-6296951)
chr6 (19-84)||(6303696-6303761)
chr6 (20-81)||(10377105-10377166)
chr6 (28-81)||(10424516-10424569)
chr6 (32-81)||(22501084-22501133)
chr6 (20-81)||(34396136-34396197)
chr6 (20-79)||(6228241-6228302)
chr6 (20-68)||(12101939-12101987)
chr6 (20-79)||(18903348-18903409)
chr6 (18-66)||(20716388-20716436)
[»] chr3 (53 HSPs)
chr3 (20-81)||(33206810-33206871)
chr3 (20-81)||(46328905-46328966)
chr3 (20-84)||(35477784-35477848)
chr3 (20-81)||(14417921-14417982)
chr3 (28-81)||(34344759-34344812)
chr3 (20-81)||(42270994-42271055)
chr3 (20-81)||(45713533-45713594)
chr3 (20-84)||(27066663-27066727)
chr3 (20-83)||(48173339-48173402)
chr3 (20-74)||(13616062-13616116)
chr3 (31-81)||(43566777-43566827)
chr3 (20-81)||(8175813-8175874)
chr3 (20-73)||(20623766-20623819)
chr3 (20-73)||(36727452-36727505)
chr3 (20-81)||(42832043-42832104)
chr3 (20-81)||(43774238-43774299)
chr3 (20-81)||(47191426-47191487)
chr3 (28-84)||(35483330-35483386)
chr3 (20-71)||(23820682-23820733)
chr3 (20-79)||(30157055-30157114)
chr3 (19-81)||(18201458-18201520)
chr3 (20-78)||(24537880-24537938)
chr3 (32-74)||(31698598-31698640)
chr3 (23-81)||(53870890-53870948)
chr3 (20-81)||(13539945-13540006)
chr3 (44-81)||(24751517-24751554)
chr3 (20-73)||(32508783-32508836)
chr3 (20-73)||(49146137-49146190)
chr3 (20-81)||(49639081-49639142)
chr3 (20-81)||(50724420-50724481)
chr3 (20-81)||(50788367-50788428)
chr3 (20-73)||(54983694-54983747)
chr3 (29-81)||(8959511-8959563)
chr3 (44-80)||(36256661-36256697)
chr3 (18-78)||(38682242-38682302)
chr3 (20-63)||(4072732-4072775)
chr3 (30-81)||(28206518-28206569)
chr3 (20-66)||(2732716-2732762)
chr3 (20-70)||(14271919-14271969)
chr3 (20-78)||(15498259-15498317)
chr3 (49-79)||(30058819-30058849)
chr3 (20-74)||(50144594-50144648)
chr3 (20-73)||(335019-335072)
chr3 (44-81)||(13874815-13874852)
chr3 (20-73)||(16006495-16006548)
chr3 (20-81)||(36331707-36331768)
chr3 (20-73)||(37279680-37279733)
chr3 (18-66)||(16277947-16277995)
chr3 (31-83)||(17269298-17269350)
chr3 (29-81)||(17439946-17439998)
chr3 (113-153)||(21306030-21306070)
chr3 (49-81)||(24751250-24751282)
chr3 (20-79)||(47864689-47864750)
[»] chr2 (47 HSPs)
chr2 (20-81)||(8234773-8234834)
chr2 (20-81)||(20122456-20122517)
chr2 (20-81)||(32891334-32891395)
chr2 (20-80)||(36426838-36426898)
chr2 (20-81)||(580764-580825)
chr2 (20-81)||(3037603-3037664)
chr2 (20-81)||(9796950-9797011)
chr2 (20-81)||(11133129-11133190)
chr2 (20-81)||(17154702-17154763)
chr2 (28-81)||(29664664-29664717)
chr2 (28-81)||(33001534-33001587)
chr2 (20-84)||(11837042-11837106)
chr2 (20-79)||(18386795-18386854)
chr2 (31-81)||(3179388-3179438)
chr2 (20-81)||(19905636-19905697)
chr2 (20-81)||(34018051-34018112)
chr2 (20-78)||(1836641-1836699)
chr2 (18-84)||(16973959-16974025)
chr2 (32-81)||(9547108-9547157)
chr2 (18-71)||(17239952-17240005)
chr2 (44-81)||(22538616-22538653)
chr2 (20-81)||(30474176-30474237)
chr2 (20-81)||(31564142-31564203)
chr2 (20-81)||(44422160-44422221)
chr2 (31-75)||(3364789-3364833)
chr2 (29-81)||(14483638-14483690)
chr2 (44-84)||(18209919-18209959)
chr2 (20-84)||(1244622-1244688)
chr2 (18-81)||(7086304-7086367)
chr2 (20-75)||(44721691-44721746)
chr2 (44-75)||(44950983-44951014)
chr2 (31-81)||(2557564-2557614)
chr2 (20-81)||(9802945-9803009)
chr2 (31-81)||(11190080-11190130)
chr2 (119-153)||(31296541-31296575)
chr2 (20-65)||(1962879-1962923)
chr2 (20-81)||(2114416-2114477)
chr2 (44-81)||(3021070-3021107)
chr2 (20-81)||(17115525-17115586)
chr2 (20-84)||(18424128-18424194)
chr2 (20-73)||(36665483-36665536)
chr2 (52-81)||(41195923-41195952)
chr2 (20-81)||(12206551-12206614)
chr2 (20-84)||(18255674-18255738)
chr2 (48-80)||(37246446-37246478)
chr2 (20-84)||(41535242-41535306)
chr2 (44-80)||(41699454-41699490)
[»] chr1 (47 HSPs)
chr1 (20-81)||(15368858-15368919)
chr1 (29-81)||(37490952-37491004)
chr1 (19-81)||(19793578-19793640)
chr1 (19-81)||(35593815-35593877)
chr1 (20-81)||(11405509-11405570)
chr1 (20-81)||(15774293-15774354)
chr1 (20-81)||(37733808-37733869)
chr1 (20-81)||(47939180-47939241)
chr1 (30-81)||(9527489-9527540)
chr1 (28-81)||(3532955-3533008)
chr1 (20-81)||(4354086-4354147)
chr1 (20-77)||(39433411-39433468)
chr1 (20-81)||(46116155-46116216)
chr1 (20-81)||(48110582-48110643)
chr1 (20-81)||(41677113-41677176)
chr1 (20-74)||(32711132-32711186)
chr1 (15-81)||(34560319-34560385)
chr1 (31-81)||(38019928-38019978)
chr1 (28-78)||(39994832-39994882)
chr1 (28-78)||(42832008-42832058)
chr1 (20-69)||(23463979-23464028)
chr1 (20-81)||(24014589-24014650)
chr1 (20-77)||(39434671-39434728)
chr1 (20-79)||(21884628-21884687)
chr1 (28-79)||(50859350-50859401)
chr1 (20-82)||(538309-538371)
chr1 (31-81)||(3276435-3276485)
chr1 (44-74)||(4429470-4429500)
chr1 (31-81)||(4616937-4616987)
chr1 (20-66)||(6014514-6014560)
chr1 (18-72)||(24662033-24662087)
chr1 (28-74)||(40814754-40814800)
chr1 (20-81)||(8364389-8364450)
chr1 (44-81)||(11907280-11907317)
chr1 (44-73)||(12866201-12866230)
chr1 (44-81)||(22346496-22346533)
chr1 (20-81)||(24636777-24636838)
chr1 (20-81)||(30649146-30649207)
chr1 (20-73)||(44803280-44803333)
chr1 (20-68)||(1031640-1031688)
chr1 (49-81)||(9408587-9408619)
chr1 (20-81)||(9768788-9768851)
chr1 (20-81)||(9976363-9976426)
chr1 (20-81)||(12553247-12553310)
chr1 (20-79)||(32635193-32635253)
chr1 (20-79)||(40061496-40061557)
chr1 (20-81)||(50199455-50199518)
[»] chr4 (63 HSPs)
chr4 (18-81)||(10098176-10098239)
chr4 (20-79)||(21476064-21476123)
chr4 (18-81)||(29269296-29269359)
chr4 (20-81)||(3465636-3465697)
chr4 (20-81)||(20753106-20753167)
chr4 (20-80)||(28221289-28221349)
chr4 (20-84)||(39992888-39992952)
chr4 (18-81)||(31578068-31578131)
chr4 (19-81)||(41943959-41944021)
chr4 (44-81)||(2487364-2487401)
chr4 (20-81)||(17859831-17859892)
chr4 (35-84)||(27584036-27584085)
chr4 (28-81)||(30152175-30152228)
chr4 (20-81)||(30295566-30295627)
chr4 (20-81)||(30324468-30324529)
chr4 (20-81)||(36008328-36008389)
chr4 (20-81)||(37274633-37274694)
chr4 (20-81)||(41003153-41003214)
chr4 (20-81)||(53697961-53698022)
chr4 (30-78)||(12820389-12820437)
chr4 (23-71)||(24234065-24234113)
chr4 (20-84)||(35451099-35451163)
chr4 (18-69)||(37032172-37032223)
chr4 (20-78)||(12856237-12856295)
chr4 (20-70)||(47017938-47017988)
chr4 (20-81)||(15021478-15021539)
chr4 (17-70)||(31601856-31601909)
chr4 (44-81)||(33944344-33944381)
chr4 (20-81)||(43143773-43143834)
chr4 (28-81)||(44074914-44074967)
chr4 (20-77)||(52587324-52587381)
chr4 (44-81)||(54304910-54304947)
chr4 (20-79)||(5430347-5430407)
chr4 (20-68)||(6637716-6637764)
chr4 (20-72)||(34773673-34773725)
chr4 (20-79)||(9285642-9285701)
chr4 (20-83)||(15638739-15638802)
chr4 (23-81)||(20266918-20266977)
chr4 (18-81)||(22478721-22478784)
chr4 (20-79)||(32885741-32885800)
chr4 (20-79)||(36257747-36257806)
chr4 (20-84)||(49039421-49039487)
chr4 (20-83)||(56314814-56314877)
chr4 (31-81)||(548868-548918)
chr4 (20-70)||(10757767-10757817)
chr4 (20-70)||(10970938-10970988)
chr4 (20-62)||(35747482-35747524)
chr4 (20-66)||(35803089-35803135)
chr4 (28-74)||(48512260-48512306)
chr4 (20-81)||(3442896-3442957)
chr4 (28-73)||(6330925-6330970)
chr4 (28-81)||(13073136-13073189)
chr4 (20-81)||(31156201-31156262)
chr4 (20-81)||(38433364-38433425)
chr4 (30-79)||(49280652-49280701)
chr4 (44-81)||(51536936-51536973)
chr4 (44-81)||(52560841-52560878)
chr4 (44-81)||(52743284-52743321)
chr4 (18-66)||(9084810-9084858)
chr4 (20-79)||(11491200-11491261)
chr4 (20-81)||(20610792-20610855)
chr4 (49-81)||(37739188-37739220)
chr4 (29-73)||(44374068-44374112)
[»] scaffold0002 (1 HSPs)
scaffold0002 (20-73)||(451364-451417)
[»] scaffold0009 (2 HSPs)
scaffold0009 (20-84)||(26809-26873)
scaffold0009 (44-81)||(185493-185530)
[»] scaffold0687 (1 HSPs)
scaffold0687 (28-79)||(1482-1533)
[»] scaffold0044 (1 HSPs)
scaffold0044 (20-81)||(49873-49934)
[»] scaffold1086 (1 HSPs)
scaffold1086 (23-81)||(2544-2602)
[»] scaffold0533 (1 HSPs)
scaffold0533 (20-78)||(9379-9437)
[»] scaffold0020 (1 HSPs)
scaffold0020 (20-74)||(166649-166703)
[»] scaffold1990 (1 HSPs)
scaffold1990 (31-74)||(958-1001)
[»] scaffold0178 (1 HSPs)
scaffold0178 (20-83)||(4376-4439)
[»] scaffold0092 (1 HSPs)
scaffold0092 (31-74)||(47305-47348)
[»] scaffold1112 (1 HSPs)
scaffold1112 (18-81)||(2421-2481)
[»] scaffold0001 (1 HSPs)
scaffold0001 (20-79)||(419765-419826)


Alignment Details
Target: chr5 (Bit Score: 106; Significance: 5e-53; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 184 - 328
Target Start/End: Original strand, 33137815 - 33137966
Alignment:
Q  184 ggagaacactcatctgtctaatttaactaactattacattacatctaatacgggcaacaaagtatattacattaccaagtata-------tatggtactt 276  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||       ||||||||||    
T  33137815 ggagaacactcatcagtctaatttaactaactattacattacatctaatacgggcaacaaagtattttacattatcaagtatatatggactatggtactt 33137914  T
Q  277 gaatcgcatcgagtagtttcacactgttcatgttatagactatctcggtcgt 328  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  33137915 gaatcgcatcgagtagtttcacactgttcatattataggctatctcggtcgt 33137966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 6014835 - 6014893
Alignment:
Q  23 gaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    |||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||    
T  6014835 gaactccggacacctcacttattcatcttataaggtgaattctagccactaggctacct 6014893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 29096350 - 29096289
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| ||||||||||| ||| |||| |||||||||||||||||||||||||||||||||    
T  29096350 ttcgaaccccggacaccccacttattcaccttataaggtgaattctagccactaggctacct 29096289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 42455436 - 42455372
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacctaac 84  Q
    ||||||| |||||||| || ||| |||| ||||||||||||||||||||||||||||||||||||    
T  42455436 ttcgaaccccggacactccacttattcaccttataaggtgaattctagccactaggctacctaac 42455372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 29331296 - 29331357
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| ||| |||| || ||| ||||||||||||||||||||||||||||||||||||||    
T  29331296 ttcgaaccccgaacactccacttattcatcttataaggtgaattctagccactaggctacct 29331357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 32158456 - 32158395
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| ||| ||||||| ||| |||| |||||||||||||||||||||||||||||||||    
T  32158456 ttcgaaccccgaacaccccacttattcaccttataaggtgaattctagccactaggctacct 32158395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 38618723 - 38618662
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| ||||||||||| ||| |||| |||||||||||||||||||| ||||||||||||    
T  38618723 ttcgaaccccggacaccccacttattcaccttataaggtgaattctagcaactaggctacct 38618662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 2029172 - 2029112
Alignment:
Q  18 gattcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggcta 78  Q
    ||||||||| ||| ||||||| ||| |||| ||||||||||||||||||||||||||||||    
T  2029172 gattcgaaccccgaacaccccacttattcaccttataaggtgaattctagccactaggcta 2029112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 20945933 - 20945879
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactag 74  Q
    |||||| |||||||||||| ||| |||| ||||||||||||||||||||||||||    
T  20945933 ttcgaaatccggacaccccacttattcaccttataaggtgaattctagccactag 20945879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 843410 - 843349
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| ||||||||||| ||| |||| |||||||  ||||||||||||||||||||||||    
T  843410 ttcgaaccccggacaccccacttattcaccttataaattgaattctagccactaggctacct 843349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 1244769 - 1244708
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| || |||||||| ||| |||| ||||||||||||||||||||||||||| |||||    
T  1244769 ttcgaaccccagacaccccacttattcaccttataaggtgaattctagccactaggttacct 1244708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 18478056 - 18478117
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| | ||||||||| ||| |||| |||||||||||||||||||||| ||||||||||    
T  18478056 ttcgaaccctggacaccccacttattcaccttataaggtgaattctagccattaggctacct 18478117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 19059046 - 19058985
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| | ||||||||| ||| |||| |||||||||||||||||||||||||| ||||||    
T  19059046 ttcgaaccctggacaccccacttattcaccttataaggtgaattctagccactagcctacct 19058985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 36226177 - 36226116
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| |||||||| ||  || |||||||||||||||||||| |||||||||||||||||    
T  36226177 ttcgaaccccggacactccatttattcatcttataaggtgaattatagccactaggctacct 36226116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 20 - 80
Target Start/End: Original strand, 6561951 - 6562011
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacc 80  Q
    ||||||||||| ||||||| | | |||| |||||||||||||||||| |||||||||||||    
T  6561951 ttcgaactccgaacaccccacatattcaccttataaggtgaattctaaccactaggctacc 6562011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 20762334 - 20762398
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacctaac 84  Q
    ||||||| | ||||||||| ||| |||| ||||||||||||||||||| |||||| |||||||||    
T  20762334 ttcgaaccctggacaccccacttattcaccttataaggtgaattctagtcactagactacctaac 20762398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 29841398 - 29841462
Alignment:
Q  17 agattcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    |||||||||| ||||||||||| ||| |||  |||||||||| ||||||||||| ||||||||||    
T  29841398 agattcgaaccccggacaccccacttattccccttataaggtaaattctagccattaggctacct 29841462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 6806684 - 6806621
Alignment:
Q  18 gattcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||||| |||||||| || ||| ||||  ||||||||||||||||||||| ||||||||||    
T  6806684 gattcgaaccccggacactccacttattcacattataaggtgaattctagccattaggctacct 6806621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 9577360 - 9577407
Alignment:
Q  34 acccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||| ||| |||| |||||||||||||||||||||||||||||||||    
T  9577360 accccacttattcaccttataaggtgaattctagccactaggctacct 9577407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 79
Target Start/End: Original strand, 23925604 - 23925655
Alignment:
Q  28 ccggacacccctcttgttcatcttataaggtgaattctagccactaggctac 79  Q
    ||||| ||||| ||| ||||||||||||||||||||||||||||||| ||||    
T  23925604 ccggataccccacttattcatcttataaggtgaattctagccactagactac 23925655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 6671828 - 6671774
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactag 74  Q
    |||||| |||||||| | | ||| |||||||||||||||||||||||||||||||    
T  6671828 ttcgaattccggacatctcacttattcatcttataaggtgaattctagccactag 6671774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 8015888 - 8015942
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactag 74  Q
    ||||||| ||||||||||| ||| |||| |||||||||||||||||| |||||||    
T  8015888 ttcgaaccccggacaccccacttattcaccttataaggtgaattctacccactag 8015942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 71
Target Start/End: Complemental strand, 29629990 - 29629936
Alignment:
Q  17 agattcgaactccggacacccctcttgttcatcttataaggtgaattctagccac 71  Q
    |||||||||| | ||||||| | ||| ||||||||||||||||||||||||||||    
T  29629990 agattcgaaccctggacacctcacttattcatcttataaggtgaattctagccac 29629936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 30403806 - 30403864
Alignment:
Q  23 gaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    |||| ||||||||||| ||| |||| |||||||||||||||||| |||||| |||||||    
T  30403806 gaaccccggacaccccacttattcaccttataaggtgaattctaaccactaagctacct 30403864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 43166734 - 43166780
Alignment:
Q  32 acacccctcttgttcatcttataaggtgaattctagccactaggcta 78  Q
    ||||||| ||| |||| ||||||||||||||||||||||||||||||    
T  43166734 acaccccacttattcaccttataaggtgaattctagccactaggcta 43166780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 10943769 - 10943830
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| ||||||||||| ||| ||||  ||| || |||||||||||||||||||||||||    
T  10943769 ttcgaaccccggacaccccacttattcactttaaaaagtgaattctagccactaggctacct 10943830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 33800946 - 33801007
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| || |||||||| ||| |||| |||||||||||| ||||||| ||||||||||||    
T  33800946 ttcgaaccccagacaccccacttattcaccttataaggtgagttctagctactaggctacct 33801007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 2411336 - 2411272
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacctaac 84  Q
    ||||||| || |||||||| ||| ||||||||||| ||||||||||||| | || ||||||||||    
T  2411336 ttcgaaccccagacaccccacttattcatcttatatggtgaattctagcaattaagctacctaac 2411272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 80
Target Start/End: Original strand, 9963469 - 9963529
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacc 80  Q
    |||||||| ||||| |||| ||| |||| ||||||| |||||||||| |||||||||||||    
T  9963469 ttcgaacttcggaccccccacttattcaccttataaagtgaattctaaccactaggctacc 9963529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 33729842 - 33729890
Alignment:
Q  31 gacacccctcttgttcatcttataaggtgaattctagccactaggctac 79  Q
    |||||||| ||| |||| |||||||||||||||||| ||||||||||||    
T  33729842 gacaccccacttattcaccttataaggtgaattctaaccactaggctac 33729890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 30 - 81
Target Start/End: Complemental strand, 18202125 - 18202074
Alignment:
Q  30 ggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||||  ||| |||| ||||||||||||||| |||||||||||||||||    
T  18202125 ggacacccaacttattcaccttataaggtgaattatagccactaggctacct 18202074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 27219593 - 27219546
Alignment:
Q  32 acacccctcttgttcatcttataaggtgaattctagccactaggctac 79  Q
    ||||||| ||| |||| || ||||||||||||||||||||||||||||    
T  27219593 acaccccacttattcacctaataaggtgaattctagccactaggctac 27219546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 81
Target Start/End: Original strand, 5156961 - 5157011
Alignment:
Q  31 gacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    |||||||  ||| |||| |||||||||||||||||||||||||| ||||||    
T  5156961 gacaccctacttattcaccttataaggtgaattctagccactagactacct 5157011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 17077412 - 17077475
Alignment:
Q  18 gattcgaactccggacacccctcttgttcatcttataaggtgaat---tctagccactaggctac 79  Q
    ||||||||| ||||||||||| ||| ||||||||| |||||||||   |||||||||||||||||    
T  17077412 gattcgaaccccggacaccccacttattcatctta-aaggtgaatttatctagccactaggctac 17077475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 18872574 - 18872633
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| ||| ||||||| ||| |||| ||||  |||||||||||||||||||||||||||    
T  18872574 ttcgaaccccgaacaccccacttattcacctta--aggtgaattctagccactaggctacct 18872633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 42816620 - 42816678
Alignment:
Q  26 ctccggacacccctcttgttcatcttataaggtgaattctagccactaggctacctaac 84  Q
    |||||||||||   ||| |||| |||||||||| |||||||| ||||||||||||||||    
T  42816620 ctccggacaccgaacttattcaccttataaggtcaattctaggcactaggctacctaac 42816678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 13754059 - 13754120
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    |||||||  ||||||||||  || ||||||||||||||||||||||| |  |||||||||||    
T  13754059 ttcgaacgtcggacaccccatttattcatcttataaggtgaattctaactgctaggctacct 13754120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 38307727 - 38307764
Alignment:
Q  44 ttcatcttataaggtgaattctagccactaggctacct 81  Q
    |||| ||||||||||||||||||| |||||||||||||    
T  38307727 ttcagcttataaggtgaattctagtcactaggctacct 38307764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 10508643 - 10508691
Alignment:
Q  30 ggacacccctcttgttcatcttataaggtgaattctagccactaggcta 78  Q
    ||||||||| ||| |||| ||||||||||||||| |||||| |||||||    
T  10508643 ggacaccccacttattcaccttataaggtgaattttagccaataggcta 10508691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 81
Target Start/End: Original strand, 29050875 - 29050903
Alignment:
Q  53 taaggtgaattctagccactaggctacct 81  Q
    |||||||||||||||||||||||||||||    
T  29050875 taaggtgaattctagccactaggctacct 29050903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 40384304 - 40384359
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatctt--ataaggtgaattctagccacta 73  Q
    ||||||||||||||||||| ||| |||| |||  | ||||||||||||||||||||    
T  40384304 ttcgaactccggacaccccacttattcaccttaaaaaaggtgaattctagccacta 40384359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 33202596 - 33202535
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  33202596 ttcgaaccccggacaccccacttattcatcttataaggtgaattctagccactaggctacct 33202535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 21285395 - 21285334
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| ||||||||||| ||| |||| |||||||||||||||||||||||||||||||||    
T  21285395 ttcgaaccccggacaccccacttattcaccttataaggtgaattctagccactaggctacct 21285334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 34948159 - 34948220
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| ||||||||||| ||| |||| |||||||||||||||||||||||||||||||||    
T  34948159 ttcgaaccccggacaccccacttattcaccttataaggtgaattctagccactaggctacct 34948220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 29658314 - 29658255
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctac 79  Q
    ||||||| ||||||||||| ||| |||| |||||||||||||||||||||||||||||||    
T  29658314 ttcgaaccccggacaccccacttattcaccttataaggtgaattctagccactaggctac 29658255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 27907929 - 27907877
Alignment:
Q  29 cggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    |||||||||| ||| |||||||||||||||||||| |||||||||||||||||    
T  27907929 cggacaccccacttattcatcttataaggtgaattttagccactaggctacct 27907877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 29 - 79
Target Start/End: Original strand, 22741267 - 22741317
Alignment:
Q  29 cggacacccctcttgttcatcttataaggtgaattctagccactaggctac 79  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||| ||||    
T  22741267 cggacaccccacttattcatcttataaggtgaattctagccactagactac 22741317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 20 - 78
Target Start/End: Original strand, 35368449 - 35368507
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggcta 78  Q
    |||||||||||||||||||  || |||| |||||||||||||||||||||||| |||||    
T  35368449 ttcgaactccggacaccccatttattcaccttataaggtgaattctagccactgggcta 35368507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 2366410 - 2366471
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    |||||||||  |||||||| ||| |||| |||||||||||||||||||||| ||||||||||    
T  2366410 ttcgaactctagacaccccacttattcaccttataaggtgaattctagccattaggctacct 2366471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 22706066 - 22706009
Alignment:
Q  24 aactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||||||||||| ||| |||| |||||||| ||||||||||| ||||||||||||    
T  22706066 aactccggacaccccacttattcaccttataagatgaattctagctactaggctacct 22706009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 29710143 - 29710082
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    |||||||||  ||||| || ||| |||||||||||||||||||||||||||||| |||||||    
T  29710143 ttcgaactctagacactccacttattcatcttataaggtgaattctagccactaagctacct 29710082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 47552266 - 47552327
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| ||||||||||  ||| |||| ||||||||||||||||||||||| |||||||||    
T  47552266 ttcgaaccccggacaccctacttattcaccttataaggtgaattctagccaccaggctacct 47552327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 20 - 80
Target Start/End: Original strand, 30644222 - 30644282
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacc 80  Q
    ||||||| || |||||||| ||| |||| |||||||||||||||||||||||||| |||||    
T  30644222 ttcgaaccccagacaccccacttattcaccttataaggtgaattctagccactagtctacc 30644282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 20 - 80
Target Start/End: Original strand, 42887207 - 42887267
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacc 80  Q
    ||||||| ||||||||||| ||| || | |||||||||||||||||||||||||| |||||    
T  42887207 ttcgaaccccggacaccccacttatttaccttataaggtgaattctagccactagactacc 42887267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 32 - 84
Target Start/End: Complemental strand, 43902566 - 43902514
Alignment:
Q  32 acacccctcttgttcatcttataaggtgaattctagccactaggctacctaac 84  Q
    ||||||| ||| |||| ||||||||||||||||||||||||| ||||||||||    
T  43902566 acaccccacttattcaccttataaggtgaattctagccactatgctacctaac 43902514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 45198143 - 45198079
Alignment:
Q  17 agattcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    |||||||||| |||||||||||  || |||| |||||||||||||||||||||| ||| ||||||    
T  45198143 agattcgaaccccggacaccccatttattcaccttataaggtgaattctagccattagactacct 45198079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 84
Target Start/End: Complemental strand, 37129392 - 37129337
Alignment:
Q  29 cggacacccctcttgttcatcttataaggtgaattctagccactaggctacctaac 84  Q
    |||||||||| ||| |||| |||||||||| ||||||||||| |||||||||||||    
T  37129392 cggacaccccacttattcaccttataaggtaaattctagccagtaggctacctaac 37129337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 4169132 - 4169190
Alignment:
Q  23 gaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    |||| ||||||||||| ||| |||| ||||||| ||||||||||||||||||| |||||    
T  4169132 gaaccccggacaccccacttattcaccttataaagtgaattctagccactaggttacct 4169190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 14102517 - 14102575
Alignment:
Q  23 gaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    |||| ||||||||||| ||| |||| |||||||||||||||||| | ||||||||||||    
T  14102517 gaaccccggacaccccacttattcaccttataaggtgaattctaactactaggctacct 14102575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 14412534 - 14412592
Alignment:
Q  23 gaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    |||| ||||||||||| ||| |||| |||||||||||||||||| | ||||||||||||    
T  14412534 gaaccccggacaccccacttattcaccttataaggtgaattctaactactaggctacct 14412592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 17900920 - 17900862
Alignment:
Q  21 tcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctac 79  Q
    |||||| |||||| |||| ||| |||  |||||||||||||||||||||||||||||||    
T  17900920 tcgaaccccggactccccacttattctccttataaggtgaattctagccactaggctac 17900862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 33555122 - 33555176
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactag 74  Q
    ||||||| |||||||| || ||| ||||||||||||| |||||||||||||||||    
T  33555122 ttcgaaccccggacactccacttattcatcttataagctgaattctagccactag 33555176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 74
Target Start/End: Complemental strand, 35890920 - 35890878
Alignment:
Q  32 acacccctcttgttcatcttataaggtgaattctagccactag 74  Q
    ||||||| ||| |||||||||||||||||||||||||||||||    
T  35890920 acaccccacttattcatcttataaggtgaattctagccactag 35890878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 38792268 - 38792322
Alignment:
Q  23 gaactccggacacccctcttgttcatcttataaggtgaattctagccactaggct 77  Q
    |||| ||||||||||  ||| |||| |||||||||||||||||||||||||||||    
T  38792268 gaaccccggacaccctacttattcaccttataaggtgaattctagccactaggct 38792322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 8214171 - 8214224
Alignment:
Q  28 ccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||||||| ||| |||| |||||||||||||||||| ||||||| ||||||    
T  8214171 ccggacaccccacttattcaccttataaggtgaattctaaccactagactacct 8214224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 38025418 - 38025455
Alignment:
Q  44 ttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  38025418 ttcatcttataaggtgaatcctagccactaggctacct 38025455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 38451924 - 38451977
Alignment:
Q  28 ccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||||||| ||| ||||  ||||||||||||||||||||||||| ||||||    
T  38451924 ccggacaccccacttattcacattataaggtgaattctagccactagactacct 38451977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 4590647 - 4590592
Alignment:
Q  28 ccggacacccctcttgttcatcttataaggtgaa--ttctagccactaggctacct 81  Q
    ||||||||| | ||| ||||||||||||||||||  ||||||||||||||||||||    
T  4590647 ccggacaccacacttattcatcttataaggtgaattttctagccactaggctacct 4590592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 7263016 - 7262976
Alignment:
Q  44 ttcatcttataaggtgaattctagccactaggctacctaac 84  Q
    ||||||||||||||||||||||||||| ||||| |||||||    
T  7263016 ttcatcttataaggtgaattctagccattaggcaacctaac 7262976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 5787526 - 5787573
Alignment:
Q  32 acacccctcttgttcatcttataaggtgaattctagccactaggctac 79  Q
    ||||||| ||| |||| ||||||||||||||||||| |||||||||||    
T  5787526 acaccccacttattcaccttataaggtgaattctagtcactaggctac 5787573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 30 - 81
Target Start/End: Original strand, 22047583 - 22047634
Alignment:
Q  30 ggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||||| ||| |||| |||||||| |||||||||||||||| |||||||    
T  22047583 ggacaccccacttattcaccttataagatgaattctagccactaagctacct 22047634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 22966000 - 22965941
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctac 79  Q
    ||||||| || |||||||| ||| |||| |||||||||||||||||| ||||||| ||||    
T  22966000 ttcgaaccccagacaccccacttattcaccttataaggtgaattctaaccactagactac 22965941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 30 - 81
Target Start/End: Complemental strand, 47403620 - 47403569
Alignment:
Q  30 ggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    |||||| || ||| |||| ||||||||||||||||||||||||| |||||||    
T  47403620 ggacactccacttattcaccttataaggtgaattctagccactaagctacct 47403569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 3595339 - 3595401
Alignment:
Q  19 attcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    |||||||| ||| |||||||  || |||| ||||||||||||||||||| | |||||||||||    
T  3595339 attcgaaccccgaacaccccaattattcaccttataaggtgaattctaggctctaggctacct 3595401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 27957639 - 27957590
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagcca 70  Q
    |||||| |||||||||||| ||| |||| ||||||||||||||||||||||    
T  27957639 ttcgaaatccggacacccc-cttattcaccttataaggtgaattctagcca 27957590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 44843752 - 44843798
Alignment:
Q  28 ccggacacccctcttgttcatcttataaggtgaattctagccactag 74  Q
    |||||||||||  || ||||||||||||||||||||||| |||||||    
T  44843752 ccggacaccccatttattcatcttataaggtgaattctaaccactag 44843798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 2261518 - 2261465
Alignment:
Q  28 ccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||||||  ||| |||| ||||||||||||||||||| ||||| |||||||    
T  2261518 ccggacacccaacttattcaccttataaggtgaattctagacactatgctacct 2261465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 4042310 - 4042249
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    |||||||| |||||||||  ||| ||||| |||||||||||||||||| | |||| ||||||    
T  4042310 ttcgaacttcggacacccaacttattcattttataaggtgaattctagtcgctagactacct 4042249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 81
Target Start/End: Complemental strand, 14967651 - 14967614
Alignment:
Q  44 ttcatcttataaggtgaattctagccactaggctacct 81  Q
    |||| |||||||||||||||||||||||||| ||||||    
T  14967651 ttcaacttataaggtgaattctagccactagactacct 14967614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 81
Target Start/End: Complemental strand, 15397127 - 15397090
Alignment:
Q  44 ttcatcttataaggtgaattctagccactaggctacct 81  Q
    |||| |||||||||||||||||||||||||| ||||||    
T  15397127 ttcaacttataaggtgaattctagccactagactacct 15397090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 30152794 - 30152847
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccacta 73  Q
    ||||||| ||| ||||||| ||| |||| |||||||| ||||||||||||||||    
T  30152794 ttcgaaccccgaacaccccacttattcaccttataagatgaattctagccacta 30152847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 39969076 - 39969031
Alignment:
Q  29 cggacacccctcttgttcatcttataaggtgaattctagccactag 74  Q
    |||||||| | ||| ||||||||||||| |||||||||||||||||    
T  39969076 cggacacctcacttattcatcttataagatgaattctagccactag 39969031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 45011700 - 45011639
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    |||||||  |||| ||||| ||| |||| |||||||||||||||||||||| |||| |||||    
T  45011700 ttcgaacctcggagaccccacttattcaccttataaggtgaattctagccattagggtacct 45011639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 27454064 - 27454126
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaatt---ctagccactaggctac 79  Q
    |||||||  |||||||||| ||| ||||||||| ||||||||||   ||||||||||||||||    
T  27454064 ttcgaacctcggacaccccacttattcatcttaaaaggtgaatttctctagccactaggctac 27454126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 81
Target Start/End: Original strand, 30567287 - 30567315
Alignment:
Q  53 taaggtgaattctagccactaggctacct 81  Q
    |||||||||||||||||||||||||||||    
T  30567287 taaggtgaattctagccactaggctacct 30567315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 65
Target Start/End: Original strand, 31694120 - 31694168
Alignment:
Q  17 agattcgaactccggacacccctcttgttcatcttataaggtgaattct 65  Q
    |||||||||||||||||||||| ||| || |  ||||||||||||||||    
T  31694120 agattcgaactccggacaccccacttatttactttataaggtgaattct 31694168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 81
Target Start/End: Complemental strand, 44437847 - 44437815
Alignment:
Q  49 cttataaggtgaattctagccactaggctacct 81  Q
    |||||||| ||||||||||||||||||||||||    
T  44437847 cttataagatgaattctagccactaggctacct 44437815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 6e-19; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 8740698 - 8740634
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacctaac 84  Q
    ||||||||||||||||||  ||| |||||||||||||||||||||||||||||| ||||||||||    
T  8740698 ttcgaactccggacaccctacttattcatcttataaggtgaattctagccactaagctacctaac 8740634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 43468747 - 43468689
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggcta 78  Q
    ||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||    
T  43468747 ttcgaactccggacaccccacttattcaccttataaggtgaattctagccactaggcta 43468689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 14684258 - 14684197
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    |||||||| |||||||||| ||| |||||||||||||||||||| |||||||||||||||||    
T  14684258 ttcgaacttcggacaccccacttattcatcttataaggtgaattatagccactaggctacct 14684197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 34073281 - 34073217
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacctaac 84  Q
    ||||||| ||||||||||| ||| |||| ||||||||||||||||||||||| || |||||||||    
T  34073281 ttcgaaccccggacaccccacttattcaccttataaggtgaattctagccacgagactacctaac 34073217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 79
Target Start/End: Original strand, 7603798 - 7603849
Alignment:
Q  28 ccggacacccctcttgttcatcttataaggtgaattctagccactaggctac 79  Q
    ||||||||||| ||| ||||||||||| ||||||||||||||||||||||||    
T  7603798 ccggacaccccacttattcatcttatagggtgaattctagccactaggctac 7603849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 81
Target Start/End: Original strand, 39258643 - 39258694
Alignment:
Q  30 ggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||||| ||| ||||||||||||||| ||||||||||||||||||||||    
T  39258643 ggacaccccacttattcatcttataaggtaaattctagccactaggctacct 39258694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 4798583 - 4798522
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| ||||||||||| ||| |||| ||| |||||||||||||||||||||| ||||||    
T  4798583 ttcgaaccccggacaccccacttattcaccttgtaaggtgaattctagccactagactacct 4798522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 23857365 - 23857304
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    |||||||  |||||||||  ||| ||||||||||| ||||||||||||||||||||||||||    
T  23857365 ttcgaacctcggacacccgacttattcatcttatacggtgaattctagccactaggctacct 23857304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 24074559 - 24074620
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    |||||||  |||||||| | ||| |||| |||||||||||||||||||||||||||||||||    
T  24074559 ttcgaacctcggacacctcacttattcaccttataaggtgaattctagccactaggctacct 24074620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 36359752 - 36359699
Alignment:
Q  28 ccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||||||| ||| |||| |||||||||||||||||||||||||| ||||||    
T  36359752 ccggacaccccacttattcaccttataaggtgaattctagccactagactacct 36359699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 30461589 - 30461653
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacctaac 84  Q
    |||||||||| |||| | | ||| |||| |||||||||||||||||||||||||||||| |||||    
T  30461589 ttcgaactccagacatctcacttattcaccttataaggtgaattctagccactaggctatctaac 30461653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 15042407 - 15042348
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctac 79  Q
    ||||||| ||||||||||| ||| |||| |||||||||||||||||| |||||| |||||    
T  15042407 ttcgaaccccggacaccccacttattcaccttataaggtgaattctaaccactacgctac 15042348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 79
Target Start/End: Complemental strand, 39484404 - 39484353
Alignment:
Q  28 ccggacacccctcttgttcatcttataaggtgaattctagccactaggctac 79  Q
    ||||||||||| ||| ||||||||||||||||||||||| |||||| |||||    
T  39484404 ccggacaccccacttattcatcttataaggtgaattctaaccactacgctac 39484353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 14010814 - 14010756
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggcta 78  Q
    ||||||| ||||||||||| ||| |||| |||||||||| |||||||||||||| ||||    
T  14010814 ttcgaaccccggacaccccacttattcaccttataaggtaaattctagccactaagcta 14010756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 7649593 - 7649642
Alignment:
Q  32 acacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| ||| |||| |||| ||||||||||||||||||||||||||||    
T  7649593 acaccccacttattcaccttacaaggtgaattctagccactaggctacct 7649642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 10184843 - 10184782
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    |||||||||||||||| ||  || |||| |||||||||||||||||||||| ||| ||||||    
T  10184843 ttcgaactccggacactccatttattcaccttataaggtgaattctagccattagactacct 10184782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 13537353 - 13537300
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccacta 73  Q
    ||||||| || |||||||| ||| |||||||||||||||||||| |||||||||    
T  13537353 ttcgaaccccagacaccccacttattcatcttataaggtgaattgtagccacta 13537300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 13626901 - 13626848
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccacta 73  Q
    ||||||| || |||||||| ||| |||||||||||||||||||| |||||||||    
T  13626901 ttcgaaccccagacaccccacttattcatcttataaggtgaattgtagccacta 13626848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 14683929 - 14683990
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| ||||||| ||| ||| |||| ||||||||||||||||||| |||||| ||||||    
T  14683929 ttcgaaccccggacatcccacttattcaccttataaggtgaattctagtcactagactacct 14683990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 17987491 - 17987430
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| |||||||||||  || |||| ||||||||||||||| ||||||||||| |||||    
T  17987491 ttcgaaccccggacaccccaattattcaccttataaggtgaattatagccactaggatacct 17987430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 33570471 - 33570418
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccacta 73  Q
    |||||||  |||||||||| ||| |||| |||||||||||||||||||||||||    
T  33570471 ttcgaacctcggacaccccacttattcaccttataaggtgaattctagccacta 33570418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 41125475 - 41125415
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    |||||| |||||||| ||| ||| |||| ||||||||||||||||||| |||||||||||||    
T  41125475 ttcgaagtccggacatcccacttattcaccttataaggtgaattctag-cactaggctacct 41125415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 40249922 - 40249859
Alignment:
Q  20 ttcgaactccggacacc--cctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    |||||||||||||||||  || ||| |||| |||||||| ||||||||| ||||||||||||||    
T  40249922 ttcgaactccggacacctcccacttattcaccttataagatgaattctaaccactaggctacct 40249859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 44070410 - 44070346
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacctaac 84  Q
    |||||||  |||||||||  ||| |||| |||||||||||||||||||||||||  |||||||||    
T  44070410 ttcgaacctcggacaccctacttattcaccttataaggtgaattctagccactaaactacctaac 44070346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 27558914 - 27558852
Alignment:
Q  18 gattcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||||| || |||||||| ||| |||| ||||| |||||||||||||||||||| ||||||    
T  27558914 gattcgaac-ccagacaccccacttattcaccttattaggtgaattctagccactagtctacct 27558852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 43875019 - 43874960
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctac 79  Q
    ||||||| || |||||||| ||| |||| |||||||||||||||||| | ||||||||||    
T  43875019 ttcgaacaccagacaccccacttattcaccttataaggtgaattctaacaactaggctac 43874960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 81
Target Start/End: Complemental strand, 3379679 - 3379629
Alignment:
Q  31 gacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    |||||||| ||| |||| |||||||||||||||||||||| || |||||||    
T  3379679 gacaccccacttattcaccttataaggtgaattctagccattaagctacct 3379629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 37154566 - 37154628
Alignment:
Q  19 attcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    |||||||| | |||||||||  || |||| ||||||||||||||||||| |||||| ||||||    
T  37154566 attcgaaccctggacaccccatttattcaccttataaggtgaattctaggcactagactacct 37154628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 5184929 - 5184876
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccacta 73  Q
    ||||||| | ||||||||| ||| |||| |||||||||||||||||| ||||||    
T  5184929 ttcgaaccctggacaccccacttattcaccttataaggtgaattctaaccacta 5184876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 8682434 - 8682495
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| |||||||  || ||| |||||  ||||||||||||||||| |||||||||||||    
T  8682434 ttcgaaccccggacagtccccttattcattatataaggtgaattctagtcactaggctacct 8682495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 9525010 - 9525071
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| || |||||||  ||| |||| |||||||||||||||||||||  ||||||||||    
T  9525010 ttcgaaccccagacaccctacttattcaccttataaggtgaattctagccgttaggctacct 9525071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 10970331 - 10970380
Alignment:
Q  32 acacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| ||| |||| |||||||| |||||||||||||||||| |||||    
T  10970331 acaccccacttattcaccttataagatgaattctagccactaggttacct 10970380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 14012665 - 14012718
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccacta 73  Q
    |||||| |||||||||||| ||| ||||  |||||||||||||| |||||||||    
T  14012665 ttcgaagtccggacaccccacttattcacattataaggtgaattttagccacta 14012718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 24608525 - 24608464
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| || |||||||  ||| |||| |||||||||||||||||||||  ||||||||||    
T  24608525 ttcgaaccccagacaccctacttattcaccttataaggtgaattctagccgttaggctacct 24608464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 25689430 - 25689369
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| ||||||||||  |||  ||| ||||||| |||||||||| ||||||||||||||    
T  25689430 ttcgaaccccggacaccctacttaatcaccttataaagtgaattctaaccactaggctacct 25689369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 26900481 - 26900526
Alignment:
Q  29 cggacacccctcttgttcatcttataaggtgaattctagccactag 74  Q
    ||||||||||  || ||||||||| |||||||||||||||||||||    
T  26900481 cggacaccccatttattcatcttaaaaggtgaattctagccactag 26900526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 84
Target Start/End: Complemental strand, 4354807 - 4354775
Alignment:
Q  52 ataaggtgaattctagccactaggctacctaac 84  Q
    ||||||||||||||||||||||| |||||||||    
T  4354807 ataaggtgaattctagccactagactacctaac 4354775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 39165033 - 39165093
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaa-ttctagccactaggctac 79  Q
    ||||||| ||||||||||| ||| |||| ||||  ||||||| ||||||||||||||||||    
T  39165033 ttcgaacaccggacaccccacttattcaccttaagaggtgaatttctagccactaggctac 39165093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 6e-19; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 16251565 - 16251501
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacctaac 84  Q
    ||||||||||||||||||| ||| |||| ||||||||||||||||||| ||||||||||||||||    
T  16251565 ttcgaactccggacaccccacttattcaccttataaggtgaattctagtcactaggctacctaac 16251501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 3448405 - 3448466
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| ||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||    
T  3448405 ttcgaaccccggacaccccacttattcatcttataaggtgaattctagccaataggctacct 3448466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 18904725 - 18904664
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||||| ||||||||| ||| |||| |||||||||||||||||||||||||||||||||    
T  18904725 ttcgaactctggacaccccacttattcaccttataaggtgaattctagccactaggctacct 18904664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 25020570 - 25020509
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| ||||||||||| ||| |||| |||||||||||||||||||||||||||||||||    
T  25020570 ttcgaaccccggacaccccacttattcaccttataaggtgaattctagccactaggctacct 25020509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 12089150 - 12089211
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| ||||||||||| ||| |||| ||||||||||||||||||||||||||| |||||    
T  12089150 ttcgaaccccggacaccccacttattcaccttataaggtgaattctagccactaggatacct 12089211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 15288997 - 15288945
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccact 72  Q
    |||||||||| |||||||| ||| |||||||||||||||||||||||||||||    
T  15288997 ttcgaactccagacaccccacttattcatcttataaggtgaattctagccact 15288945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 22983633 - 22983692
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctac 79  Q
    ||||||| ||||||||||| ||| ||||||||||||||||||||||| |||||| |||||    
T  22983633 ttcgaaccccggacaccccacttattcatcttataaggtgaattctaaccactatgctac 22983692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 23804775 - 23804716
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctac 79  Q
    ||||||| ||||||||||| ||| ||||||||||||||||||||||| |||||| |||||    
T  23804775 ttcgaaccccggacaccccacttattcatcttataaggtgaattctaaccactatgctac 23804716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 35190816 - 35190879
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacctaa 83  Q
    ||||||| ||| ||||||| ||| |||| |||||||||||||||||||||||||| ||||||||    
T  35190816 ttcgaaccccgaacaccccacttattcaccttataaggtgaattctagccactagactacctaa 35190879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 31 - 81
Target Start/End: Complemental strand, 5134465 - 5134415
Alignment:
Q  31 gacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    |||||||| ||| |||| |||||||||||||||||||||||||||||||||    
T  5134465 gacaccccacttattcaccttataaggtgaattctagccactaggctacct 5134415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 12127952 - 12127890
Alignment:
Q  19 attcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    |||||||| |||||||| || ||| |||| |||||||||||||||||||||||||| ||||||    
T  12127952 attcgaaccccggacacgccacttattcaccttataaggtgaattctagccactagactacct 12127890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 7720545 - 7720484
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| ||||||||||| ||| |||| ||||||||||| ||||||||| |||||||||||    
T  7720545 ttcgaaccccggacaccccacttattcaccttataaggtggattctagccgctaggctacct 7720484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 9438355 - 9438414
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctac 79  Q
    ||||||| ||||||||||| ||  |||| |||||||||||||||||| ||||||||||||    
T  9438355 ttcgaaccccggacaccccactcattcaccttataaggtgaattctaaccactaggctac 9438414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 19417873 - 19417932
Alignment:
Q  18 gattcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggct 77  Q
    ||||||||  || |||||||| ||| |||||||||||||||||||||||| |||||||||    
T  19417873 gattcgaatcccagacaccccacttattcatcttataaggtgaattctagtcactaggct 19417932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 79
Target Start/End: Complemental strand, 6530237 - 6530187
Alignment:
Q  29 cggacacccctcttgttcatcttataaggtgaattctagccactaggctac 79  Q
    |||||||||| ||| |||| |||||||||||||||||||||||||| ||||    
T  6530237 cggacaccccacttattcaccttataaggtgaattctagccactagactac 6530187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 9491777 - 9491719
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggcta 78  Q
    ||||||| ||||||||||| ||| |||| |||||||| ||||||||| |||||||||||    
T  9491777 ttcgaaccccggacaccccacttattcaccttataagatgaattctaaccactaggcta 9491719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 81
Target Start/End: Original strand, 19165414 - 19165464
Alignment:
Q  31 gacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    |||||||| ||| |||| |||||||||||||||||||||||||| ||||||    
T  19165414 gacaccccacttattcaccttataaggtgaattctagccactagtctacct 19165464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 30566114 - 30566172
Alignment:
Q  23 gaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    |||| ||||||||||| ||| |||| |||||||||||||||| ||||||||| ||||||    
T  30566114 gaaccccggacaccccacttattcaccttataaggtgaattccagccactagactacct 30566172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 6652262 - 6652323
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    |||||||||| ||||||||  || |||| ||||||| ||||||| |||||||||||||||||    
T  6652262 ttcgaactccagacaccccatttattcaccttataaagtgaattatagccactaggctacct 6652323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 68
Target Start/End: Original strand, 11982817 - 11982862
Alignment:
Q  23 gaactccggacacccctcttgttcatcttataaggtgaattctagc 68  Q
    |||| ||||||||||| |||||| ||||||||||||||||||||||    
T  11982817 gaaccccggacaccccacttgtttatcttataaggtgaattctagc 11982862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 22389784 - 22389731
Alignment:
Q  28 ccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||||||| ||| |||| ||||||||||||||||||||| |||| ||||||    
T  22389784 ccggacaccccacttattcaccttataaggtgaattctagccgctagactacct 22389731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 7563610 - 7563554
Alignment:
Q  28 ccggacacccctcttgttcatcttataaggtgaattctagccactaggctacctaac 84  Q
    ||||||||||| ||| |||| ||||||||||||||| |||||||||  |||||||||    
T  7563610 ccggacaccccacttattcaccttataaggtgaattttagccactaaactacctaac 7563554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 17217011 - 17217072
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaat---tctagccactaggctac 79  Q
    ||||||||||||||||||| ||| |||||||| ||||||||||   |||||||||||||||||    
T  17217011 ttcgaactccggacaccccacttattcatctt-taaggtgaatttctctagccactaggctac 17217072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 23771086 - 23771150
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacctaac 84  Q
    |||||||||||||||||||  || ||||   ||||||||||||||| |||||||| |||||||||    
T  23771086 ttcgaactccggacaccccatttattcactctataaggtgaattcttgccactagactacctaac 23771150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 83
Target Start/End: Complemental strand, 6270627 - 6270588
Alignment:
Q  44 ttcatcttataaggtgaattctagccactaggctacctaa 83  Q
    |||| ||||||||||||||||||||||||||| |||||||    
T  6270627 ttcaccttataaggtgaattctagccactaggttacctaa 6270588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 18991471 - 18991425
Alignment:
Q  32 acacccctcttgttcatcttataaggtgaattctagccactaggctac 79  Q
    ||||||| ||| |||| |||||||||||||||||||||||||||||||    
T  18991471 acaccccacttattca-cttataaggtgaattctagccactaggctac 18991425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 3591372 - 3591310
Alignment:
Q  19 attcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    |||||||| ||||||||||  ||| |||| ||||||||||||||||||| | ||||| |||||    
T  3591372 attcgaaccccggacaccctacttattcaccttataaggtgaattctagtcgctaggttacct 3591310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 15126295 - 15126341
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattcta 66  Q
    |||||||||||||||||||  || |||| ||||||||||||||||||    
T  15126295 ttcgaactccggacaccccatttattcaccttataaggtgaattcta 15126341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 2970250 - 2970303
Alignment:
Q  28 ccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||||||| ||| |||| |||||||| ||||||||||||| | ||||||||    
T  2970250 ccggacaccccacttattcaccttataagatgaattctagccatttggctacct 2970303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 6296951 - 6296886
Alignment:
Q  19 attcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacctaac 84  Q
    ||||||||  |||||| ||  ||| |||||||||||| ||||||| ||||| ||||||||||||||    
T  6296951 attcgaacctcggacatcctacttattcatcttataatgtgaattatagccgctaggctacctaac 6296886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 6303761 - 6303696
Alignment:
Q  19 attcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacctaac 84  Q
    ||||||||  |||||| ||  ||| |||||||||||| ||||||| ||||| ||||||||||||||    
T  6303761 attcgaacctcggacatcctacttattcatcttataatgtgaattatagccgctaggctacctaac 6303696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 10377166 - 10377105
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| ||| ||||||| ||| ||||  ||||||| ||||||||||||||||| ||||||    
T  10377166 ttcgaaccccgaacaccccacttattcacgttataagatgaattctagccactagactacct 10377105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 10424569 - 10424516
Alignment:
Q  28 ccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||||||| ||| |||| ||||||| || ||||||||||||| ||||||||    
T  10424569 ccggacaccccacttattcaccttataaagtaaattctagccacttggctacct 10424516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 22501084 - 22501133
Alignment:
Q  32 acacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| ||| |||| ||| |||||||||||||||||||||| ||||||    
T  22501084 acaccccacttattcaccttgtaaggtgaattctagccactagactacct 22501133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 34396136 - 34396197
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||||||||||||||   || |||| |||||||||||||||||| ||| ||| ||||||    
T  34396136 ttcgaactccggacaccctatttattcaccttataaggtgaattctaaccaatagactacct 34396197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 6228302 - 6228241
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaat---tctagccactaggctac 79  Q
    ||||||| ||||||||||| ||| |||||||| ||||||||||   |||||||||||||||||    
T  6228302 ttcgaaccccggacaccccacttattcatctt-taaggtgaatttctctagccactaggctac 6228241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 12101939 - 12101987
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagc 68  Q
    ||||||| ||||||||||  ||| |||| ||||||||||||||||||||    
T  12101939 ttcgaaccccggacaccctacttattcaccttataaggtgaattctagc 12101987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 18903409 - 18903348
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaat---tctagccactaggctac 79  Q
    ||||||| ||||||||||| ||| |||||||| ||||||||||   |||||||||||||||||    
T  18903409 ttcgaaccccggacaccccacttattcatctt-taaggtgaatttctctagccactaggctac 18903348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 20716436 - 20716388
Alignment:
Q  18 gattcgaactccggacacccctcttgttcatcttataaggtgaattcta 66  Q
    |||||||||||| || ||||| ||| ||||||||||||| |||||||||    
T  20716436 gattcgaactccagataccccacttattcatcttataagatgaattcta 20716388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 3e-17; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 33206810 - 33206871
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| ||||||||||| ||| |||| |||||||||||||||||||||||||||||||||    
T  33206810 ttcgaaccccggacaccccacttattcaccttataaggtgaattctagccactaggctacct 33206871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 46328966 - 46328905
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| ||||||||||| ||| |||| |||||||||||||||||||||||||||||||||    
T  46328966 ttcgaaccccggacaccccacttattcaccttataaggtgaattctagccactaggctacct 46328905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 35477784 - 35477848
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacctaac 84  Q
    ||||||||||||||||||| ||| |||| ||||||||||||||||||| || |||||||||||||    
T  35477784 ttcgaactccggacaccccacttattcaccttataaggtgaattctagtcattaggctacctaac 35477848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 14417921 - 14417982
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| ||||||||||| ||| |||| ||||||||||||||||||||||||| |||||||    
T  14417921 ttcgaaccccggacaccccacttattcaccttataaggtgaattctagccactaagctacct 14417982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 34344812 - 34344759
Alignment:
Q  28 ccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||||||| ||| |||| |||||||||||||||||||||||||||||||||    
T  34344812 ccggacaccccacttattcaccttataaggtgaattctagccactaggctacct 34344759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 42271055 - 42270994
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||||||||||||||  ||| |||| |||||||||||||||||||| ||||||||||||    
T  42271055 ttcgaactccggacaccctacttattcaccttataaggtgaattctagctactaggctacct 42270994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 45713533 - 45713594
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||||||||||||||| ||| |||| |||||||||||||||||| | ||||||||||||    
T  45713533 ttcgaactccggacaccccacttattcaccttataaggtgaattctaactactaggctacct 45713594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 27066663 - 27066727
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacctaac 84  Q
    ||||||| ||||||||||| ||| |||| ||||| ||||||||||||| ||||||||||||||||    
T  27066663 ttcgaaccccggacaccccacttattcaccttatgaggtgaattctagtcactaggctacctaac 27066727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 48173339 - 48173402
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacctaa 83  Q
    ||||||| ||||||||| | ||| |||| ||||||||||||||||||||||||| |||||||||    
T  48173339 ttcgaaccccggacacctcacttattcaccttataaggtgaattctagccactaagctacctaa 48173402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 13616116 - 13616062
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactag 74  Q
    |||||||  |||||||||| ||| |||||||||||||||||||||||||||||||    
T  13616116 ttcgaacctcggacaccccacttattcatcttataaggtgaattctagccactag 13616062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 31 - 81
Target Start/End: Complemental strand, 43566827 - 43566777
Alignment:
Q  31 gacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    |||||||| ||| |||| |||||||||||||||||||||||||||||||||    
T  43566827 gacaccccacttattcaccttataaggtgaattctagccactaggctacct 43566777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 8175813 - 8175874
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||||||| ||||||| ||| |||| ||||||||||||||||||||||| || ||||||    
T  8175813 ttcgaactccgaacaccccacttattcaccttataaggtgaattctagccaccagactacct 8175874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 20623819 - 20623766
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccacta 73  Q
    ||||||||| ||||||||| ||| |||| |||||||||||||||||||||||||    
T  20623819 ttcgaactcaggacaccccacttattcaccttataaggtgaattctagccacta 20623766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 36727505 - 36727452
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccacta 73  Q
    |||||||  |||||||||| ||| ||||||||||||||||||||||||||||||    
T  36727505 ttcgaacctcggacaccccacttattcatcttataaggtgaattctagccacta 36727452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 42832104 - 42832043
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| |||||||| ||  || |||| |||||||||||||||||||||||||||||||||    
T  42832104 ttcgaaccccggacactccatttattcaccttataaggtgaattctagccactaggctacct 42832043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 43774238 - 43774299
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| || |||||||| ||| |||| ||||||||||||||||||||||||||| |||||    
T  43774238 ttcgaaccccagacaccccacttattcaccttataaggtgaattctagccactaggttacct 43774299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 47191426 - 47191487
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| ||| ||||||| ||| |||| |||||||| ||||||||||||||||||||||||    
T  47191426 ttcgaaccccgaacaccccacttattcaccttataagatgaattctagccactaggctacct 47191487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 28 - 84
Target Start/End: Original strand, 35483330 - 35483386
Alignment:
Q  28 ccggacacccctcttgttcatcttataaggtgaattctagccactaggctacctaac 84  Q
    ||||||||||| ||| |||| |||||||||| ||||||||||||||| |||||||||    
T  35483330 ccggacaccccacttattcaccttataaggtaaattctagccactagactacctaac 35483386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 71
Target Start/End: Original strand, 23820682 - 23820733
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccac 71  Q
    ||||||| || |||||||| ||| ||||||||||||||||||||||||||||    
T  23820682 ttcgaaccccagacaccccacttattcatcttataaggtgaattctagccac 23820733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 30157055 - 30157114
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctac 79  Q
    ||||||| ||||||||||  ||| |||| |||||||||||||||||| ||||||||||||    
T  30157055 ttcgaaccccggacacccaacttattcaccttataaggtgaattctaaccactaggctac 30157114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 18201520 - 18201458
Alignment:
Q  19 attcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    |||||||| ||||||||||  ||| |||| ||||||||||||||||||||| ||||| |||||    
T  18201520 attcgaaccccggacaccctacttattcaccttataaggtgaattctagccgctaggttacct 18201458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 78
Target Start/End: Original strand, 24537880 - 24537938
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggcta 78  Q
    ||||||| ||||||||||| ||| |||| |||||||||||||||||||||  |||||||    
T  24537880 ttcgaaccccggacaccccacttattcaccttataaggtgaattctagccgttaggcta 24537938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 74
Target Start/End: Original strand, 31698598 - 31698640
Alignment:
Q  32 acacccctcttgttcatcttataaggtgaattctagccactag 74  Q
    ||||||| ||| |||||||||||||||||||||||||||||||    
T  31698598 acaccccacttattcatcttataaggtgaattctagccactag 31698640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 53870890 - 53870948
Alignment:
Q  23 gaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    |||||||||||||||| ||| ||||  |||||||||||||||||| || ||||||||||    
T  53870890 gaactccggacaccccacttattcacattataaggtgaattctagtcattaggctacct 53870948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 13540006 - 13539945
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| ||||||||||| ||| || | |||||||||||||||||||||| ||| ||||||    
T  13540006 ttcgaaccccggacaccccacttatttaccttataaggtgaattctagccattagactacct 13539945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 24751517 - 24751554
Alignment:
Q  44 ttcatcttataaggtgaattctagccactaggctacct 81  Q
    |||| |||||||||||||||||||||||||||||||||    
T  24751517 ttcaccttataaggtgaattctagccactaggctacct 24751554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 32508836 - 32508783
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccacta 73  Q
    ||||||| ||| ||||||| ||| |||| |||||||||||||||||||||||||    
T  32508836 ttcgaaccccgaacaccccacttattcaccttataaggtgaattctagccacta 32508783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 49146137 - 49146190
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccacta 73  Q
    ||||||| ||||||||||| ||| ||||  ||||||||||||||||||||||||    
T  49146137 ttcgaaccccggacaccccacttattcactttataaggtgaattctagccacta 49146190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 49639081 - 49639142
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| ||| ||||||| ||| |||| ||| ||||||||||||||||||||||| |||||    
T  49639081 ttcgaaccccgaacaccccacttattcaccttgtaaggtgaattctagccactaggttacct 49639142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 50724420 - 50724481
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    |||||||  |||||||||| ||| |||| |||| || |||||||||||||||||||||||||    
T  50724420 ttcgaacctcggacaccccacttattcaccttaaaaagtgaattctagccactaggctacct 50724481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 50788428 - 50788367
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    |||||||  |||||||||| ||| |||| |||| || |||||||||||||||||||||||||    
T  50788428 ttcgaacctcggacaccccacttattcaccttaaaaagtgaattctagccactaggctacct 50788367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 54983747 - 54983694
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccacta 73  Q
    ||||||| |||||||||||  || |||| |||||||||||||||||||||||||    
T  54983747 ttcgaaccccggacaccccatttattcaccttataaggtgaattctagccacta 54983694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 8959511 - 8959563
Alignment:
Q  29 cggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    |||||||| | ||| |||||||||||||||||||||| ||||||| |||||||    
T  8959511 cggacacctcacttattcatcttataaggtgaattcttgccactaagctacct 8959563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 80
Target Start/End: Complemental strand, 36256697 - 36256661
Alignment:
Q  44 ttcatcttataaggtgaattctagccactaggctacc 80  Q
    |||| ||||||||||||||||||||||||||||||||    
T  36256697 ttcaccttataaggtgaattctagccactaggctacc 36256661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 38682302 - 38682242
Alignment:
Q  18 gattcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggcta 78  Q
    ||||||||  ||||||||||  ||| ||||||||||||||||||||||| |||||| ||||    
T  38682302 gattcgaatcccggacaccctccttattcatcttataaggtgaattctaaccactaagcta 38682242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 4072775 - 4072732
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaatt 63  Q
    |||||||| |||||||||||||| |||| |||||||||||||||    
T  4072775 ttcgaacttcggacacccctcttattcaccttataaggtgaatt 4072732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 30 - 81
Target Start/End: Complemental strand, 28206569 - 28206518
Alignment:
Q  30 ggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||| ||| ||| |||| |||||||||||||||||| ||||||||||||||    
T  28206569 ggacatcccacttattcaccttataaggtgaattctaaccactaggctacct 28206518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 2732716 - 2732762
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattcta 66  Q
    ||||||| ||||||||||| ||| |||| ||||||||||||||||||    
T  2732716 ttcgaaccccggacaccccacttattcaccttataaggtgaattcta 2732762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 14271969 - 14271919
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagcca 70  Q
    ||||||| ||||||||| |  || |||||||||||||||||||||||||||    
T  14271969 ttcgaaccccggacacctcatttattcatcttataaggtgaattctagcca 14271919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 78
Target Start/End: Original strand, 15498259 - 15498317
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggcta 78  Q
    ||||||| |||||||  || ||| |||||||||||| ||||||||||| ||||||||||    
T  15498259 ttcgaaccccggacattccacttattcatcttataatgtgaattctagacactaggcta 15498317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 79
Target Start/End: Original strand, 30058819 - 30058849
Alignment:
Q  49 cttataaggtgaattctagccactaggctac 79  Q
    |||||||||||||||||||||||||||||||    
T  30058819 cttataaggtgaattctagccactaggctac 30058849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 50144648 - 50144594
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactag 74  Q
    ||||||| |||||||| || ||| |||| |||||||||||||||||| |||||||    
T  50144648 ttcgaaccccggacactccacttattcaccttataaggtgaattctacccactag 50144594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 335072 - 335019
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccacta 73  Q
    ||||||| | ||||||||| ||| |||| |||||||||||||||||||| ||||    
T  335072 ttcgaaccctggacaccccacttattcaccttataaggtgaattctagctacta 335019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 81
Target Start/End: Complemental strand, 13874852 - 13874815
Alignment:
Q  44 ttcatcttataaggtgaattctagccactaggctacct 81  Q
    |||| |||||||||||||||||||||||||| ||||||    
T  13874852 ttcaccttataaggtgaattctagccactagactacct 13874815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 16006548 - 16006495
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccacta 73  Q
    ||||||| || |||||||| ||| |||| |||||||||||||||||| ||||||    
T  16006548 ttcgaaccccagacaccccacttattcaccttataaggtgaattctaaccacta 16006495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 36331768 - 36331707
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| ||||||||||| ||| ||||  ||| || |||||||||||||||||| ||||||    
T  36331768 ttcgaaccccggacaccccacttattcactttaaaaagtgaattctagccactagactacct 36331707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 37279680 - 37279733
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccacta 73  Q
    |||||||||| |||||||| ||| |||| ||||||||||||||| ||| |||||    
T  37279680 ttcgaactccagacaccccacttattcaccttataaggtgaattatagtcacta 37279733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 16277995 - 16277947
Alignment:
Q  18 gattcgaactccggacacccctcttgttcatcttataaggtgaattcta 66  Q
    ||||||||||||||||| ||| ||| |||| |||||||| |||||||||    
T  16277995 gattcgaactccggacatcccacttattcaccttataagatgaattcta 16277947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 83
Target Start/End: Complemental strand, 17269350 - 17269298
Alignment:
Q  31 gacacccctcttgttcatcttataaggtgaattctagccactaggctacctaa 83  Q
    |||||| | ||| |||| ||| ||||||||||||||||||||| |||||||||    
T  17269350 gacacctcacttattcaccttctaaggtgaattctagccactaagctacctaa 17269298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 17439998 - 17439946
Alignment:
Q  29 cggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    |||| ||||| ||| |||| ||||||||||||||| || ||||||||||||||    
T  17439998 cggataccccacttattcaccttataaggtgaattttaaccactaggctacct 17439946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 113 - 153
Target Start/End: Complemental strand, 21306070 - 21306030
Alignment:
Q  113 ttgtttcaaaagttgtcgcaaaataaccgtacaaatatcat 153  Q
    |||| ||||||||||||||||||| || |||||||||||||    
T  21306070 ttgtctcaaaagttgtcgcaaaatgactgtacaaatatcat 21306030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 81
Target Start/End: Complemental strand, 24751282 - 24751250
Alignment:
Q  49 cttataaggtgaattctagccactaggctacct 81  Q
    |||||||| ||||||||||||||||||||||||    
T  24751282 cttataagatgaattctagccactaggctacct 24751250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 47864689 - 47864750
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaat---tctagccactaggctac 79  Q
    ||||||| ||||||||||| ||| |||||||| ||||||||||   |||||||||||||||||    
T  47864689 ttcgaaccccggacaccccacttattcatctt-taaggtgaatttctctagccactaggctac 47864750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 3e-17; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 8234834 - 8234773
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| ||||||||||| ||| |||| |||||||||||||||||||||||||||||||||    
T  8234834 ttcgaaccccggacaccccacttattcaccttataaggtgaattctagccactaggctacct 8234773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 20122517 - 20122456
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| |||||||| || ||| ||||||||||||||||||||||||||||||||||||||    
T  20122517 ttcgaaccccggacacgccacttattcatcttataaggtgaattctagccactaggctacct 20122456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 32891334 - 32891395
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| ||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||    
T  32891334 ttcgaaccccggacaccccacttattcatcttataagatgaattctagccactaggctacct 32891395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 80
Target Start/End: Complemental strand, 36426898 - 36426838
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacc 80  Q
    ||||||||||| ||||||| ||| |||||||||||||||||||||||||||||| ||||||    
T  36426898 ttcgaactccgaacaccccacttattcatcttataaggtgaattctagccactatgctacc 36426838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 580825 - 580764
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| ||||||||||| ||| |||| |||||||| ||||||||||||||||||||||||    
T  580825 ttcgaaccccggacaccccacttattcaccttataagatgaattctagccactaggctacct 580764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 3037664 - 3037603
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| ||||||||||| ||| |||| ||||||||||||||||||| |||||||||||||    
T  3037664 ttcgaaccccggacaccccacttattcaccttataaggtgaattctaggcactaggctacct 3037603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 9796950 - 9797011
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| ||||||||||| ||| |||||||||||||||||||||||| |||||| ||||||    
T  9796950 ttcgaaccccggacaccccacttattcatcttataaggtgaattctagacactagcctacct 9797011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 11133129 - 11133190
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| ||||||||||| ||| |||| ||||||||||||||||||||||||||| |||||    
T  11133129 ttcgaaccccggacaccccacttattcaccttataaggtgaattctagccactaggttacct 11133190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 17154702 - 17154763
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| ||||||||||| ||| |||| |||||||||||| ||||||||||||||||||||    
T  17154702 ttcgaaccccggacaccccacttattcaccttataaggtgagttctagccactaggctacct 17154763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 29664664 - 29664717
Alignment:
Q  28 ccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||    
T  29664664 ccggacaccccacttattcatcttataaggtgaattctagccactagactacct 29664717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 33001587 - 33001534
Alignment:
Q  28 ccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||    
T  33001587 ccggacaccccacttattcatcttataaggtgaattctagctactaggctacct 33001534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 11837042 - 11837106
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacctaac 84  Q
    ||||||| ||||||||| | ||| |||| ||||||| ||||||||||||||||||||||||||||    
T  11837042 ttcgaaccccggacacctcacttattcaccttataaagtgaattctagccactaggctacctaac 11837106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 18386854 - 18386795
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctac 79  Q
    ||||||||||||||||||| ||| |||| |||||||| |||||||||||| |||||||||    
T  18386854 ttcgaactccggacaccccacttattcaccttataagatgaattctagccgctaggctac 18386795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 31 - 81
Target Start/End: Original strand, 3179388 - 3179438
Alignment:
Q  31 gacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    |||||||| ||| |||| |||||||||||||||||||||||||||||||||    
T  3179388 gacaccccacttattcaccttataaggtgaattctagccactaggctacct 3179438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 19905697 - 19905636
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| ||||||||||  ||| |||| |||||||||||||||||||||| ||||||||||    
T  19905697 ttcgaaccccggacacccgacttattcaccttataaggtgaattctagccattaggctacct 19905636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 34018112 - 34018051
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    |||||||  |||||||||| ||| |||| |||||||||||||||||| ||||||||||||||    
T  34018112 ttcgaacctcggacaccccacttattcaccttataaggtgaattctaaccactaggctacct 34018051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 78
Target Start/End: Original strand, 1836641 - 1836699
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggcta 78  Q
    ||||||| ||||||||||  ||| |||| | ||||||||||||||||||||||||||||    
T  1836641 ttcgaaccccggacaccctacttattcaccatataaggtgaattctagccactaggcta 1836699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 16973959 - 16974025
Alignment:
Q  18 gattcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacctaac 84  Q
    ||||||||| ||||||||||| ||| || | |||||||||||||||||| ||||||  |||||||||    
T  16973959 gattcgaaccccggacaccccacttatttaccttataaggtgaattctacccactaaactacctaac 16974025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 9547157 - 9547108
Alignment:
Q  32 acacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| ||| ||||||||||||||||||||||||||| ||| ||||||    
T  9547157 acaccccacttattcatcttataaggtgaattctagccaatagactacct 9547108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 17239952 - 17240005
Alignment:
Q  18 gattcgaactccggacacccctcttgttcatcttataaggtgaattctagccac 71  Q
    |||||||||  |||||||||| ||| ||||||||||||||||||||||| ||||    
T  17239952 gattcgaacctcggacaccccacttattcatcttataaggtgaattctaaccac 17240005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 22538616 - 22538653
Alignment:
Q  44 ttcatcttataaggtgaattctagccactaggctacct 81  Q
    |||| |||||||||||||||||||||||||||||||||    
T  22538616 ttcaccttataaggtgaattctagccactaggctacct 22538653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 30474237 - 30474176
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| || |||||||| ||| |||| |||||||||||||||||||||||| || |||||    
T  30474237 ttcgaaccccagacaccccacttattcaccttataaggtgaattctagccactgggttacct 30474176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 31564142 - 31564203
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| ||||| ||||| ||| |||| |||||||| ||||||||||||||||| ||||||    
T  31564142 ttcgaaccccggaaaccccacttattcaccttataagatgaattctagccactagactacct 31564203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 44422160 - 44422221
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| ||||||||||| ||| ||||  ||||||||| ||||||| ||||||||||||||    
T  44422160 ttcgaaccccggacaccccacttattcactttataaggtaaattctaaccactaggctacct 44422221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 3364789 - 3364833
Alignment:
Q  31 gacacccctcttgttcatcttataaggtgaattctagccactagg 75  Q
    |||||||| ||| |||||||| |||||||||||||||||||||||    
T  3364789 gacaccccacttattcatcttttaaggtgaattctagccactagg 3364833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 14483690 - 14483638
Alignment:
Q  29 cggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    |||||||||| ||| ||||||||||||||||||||||| ||| ||| ||||||    
T  14483690 cggacaccccacttattcatcttataaggtgaattctaaccaatagactacct 14483638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 18209959 - 18209919
Alignment:
Q  44 ttcatcttataaggtgaattctagccactaggctacctaac 84  Q
    |||| ||||||||||||||| ||||||||||||||||||||    
T  18209959 ttcaccttataaggtgaattatagccactaggctacctaac 18209919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 1244622 - 1244688
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatctt--ataaggtgaattctagccactaggctacctaac 84  Q
    ||||||| ||||||||||| ||| |||| |||  | ||||||||||||||||||||| |||||||||    
T  1244622 ttcgaaccccggacaccccacttattcaccttgaaaaaggtgaattctagccactagactacctaac 1244688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 7086304 - 7086367
Alignment:
Q  18 gattcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||||| ||| |||||||  || |||| |||||||||||||||||| ||||||| ||||||    
T  7086304 gattcgaaccccgaacaccccaattattcaccttataaggtgaattctaaccactagactacct 7086367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 44721746 - 44721691
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactagg 75  Q
    |||||||  ||||||||||  || |||| |||||||||||||||||||||||||||    
T  44721746 ttcgaacctcggacaccccatttattcaccttataaggtgaattctagccactagg 44721691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 75
Target Start/End: Original strand, 44950983 - 44951014
Alignment:
Q  44 ttcatcttataaggtgaattctagccactagg 75  Q
    ||||||||||||||||||||||||||||||||    
T  44950983 ttcatcttataaggtgaattctagccactagg 44951014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 81
Target Start/End: Complemental strand, 2557614 - 2557564
Alignment:
Q  31 gacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||| || ||| |||| ||||||||||||||||||||||||||| |||||    
T  2557614 gacactccacttattcaccttataaggtgaattctagccactaggttacct 2557564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 9802945 - 9803009
Alignment:
Q  20 ttcgaactccggacacccctcttgtt---catcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| ||||||||||| ||| ||   |||||||||||||||||| |||| ||||||||||||    
T  9802945 ttcgaaccccggacaccccacttattattcatcttataaggtgaattttagctactaggctacct 9803009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 81
Target Start/End: Complemental strand, 11190130 - 11190080
Alignment:
Q  31 gacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    |||||||  ||| |||| |||||||| ||||||||||||||||||||||||    
T  11190130 gacaccctacttattcaccttataagatgaattctagccactaggctacct 11190080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 153
Target Start/End: Complemental strand, 31296575 - 31296541
Alignment:
Q  119 caaaagttgtcgcaaaataaccgtacaaatatcat 153  Q
    ||||||||||||||||||||| |||||||||||||    
T  31296575 caaaagttgtcgcaaaataactgtacaaatatcat 31296541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 1962879 - 1962923
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattct 65  Q
    ||||||||||||||||||| ||| |||||||| |||||||||||||    
T  1962879 ttcgaactccggacaccccacttattcatctt-taaggtgaattct 1962923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 2114477 - 2114416
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| ||||||||| |  || |||| |||||||||||||||||||||||| | ||||||    
T  2114477 ttcgaaccccggacacctcatttattcaccttataaggtgaattctagccactggactacct 2114416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 81
Target Start/End: Complemental strand, 3021107 - 3021070
Alignment:
Q  44 ttcatcttataaggtgaattctagccactaggctacct 81  Q
    |||| |||||||| ||||||||||||||||||||||||    
T  3021107 ttcaccttataagatgaattctagccactaggctacct 3021070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 17115586 - 17115525
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| ||||||| |||  || ||||  ||||||||||||||||||| ||||||||||||    
T  17115586 ttcgaaccccggacatcccatttattcactttataaggtgaattctagcaactaggctacct 17115525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 18424194 - 18424128
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaat---tctagccactaggctacctaac 84  Q
    ||||||||||||||| ||| ||| |||||||| ||||||||||   ||||||||||||||||| ||||    
T  18424194 ttcgaactccggacatcccacttattcatctt-taaggtgaatttctctagccactaggctacttaac 18424128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 36665483 - 36665536
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccacta 73  Q
    |||||||  |||||||||| ||| ||||| ||||||||||||||||| ||||||    
T  36665483 ttcgaacctcggacaccccacttattcattttataaggtgaattctatccacta 36665536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 81
Target Start/End: Complemental strand, 41195952 - 41195923
Alignment:
Q  52 ataaggtgaattctagccactaggctacct 81  Q
    ||||||||||||||||||||||||||||||    
T  41195952 ataaggtgaattctagccactaggctacct 41195923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 12206551 - 12206614
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatctt--ataaggtgaattctagccactaggctacct 81  Q
    ||||||| ||| ||||||| ||| |||| |||  | ||||||||||||||||||||||||||||    
T  12206551 ttcgaaccccgaacaccccgcttattcaccttgaaaaaggtgaattctagccactaggctacct 12206614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 18255674 - 18255738
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacctaac 84  Q
    |||||||  |||||||||| ||| ||||  ||||||| ||||||||||||||||| ||| |||||    
T  18255674 ttcgaacctcggacaccccacttattcacattataagatgaattctagccactagactatctaac 18255738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 80
Target Start/End: Original strand, 37246446 - 37246478
Alignment:
Q  48 tcttataaggtgaattctagccactaggctacc 80  Q
    ||||||||||||||||||||||||||| |||||    
T  37246446 tcttataaggtgaattctagccactagactacc 37246478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 41535242 - 41535306
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacctaac 84  Q
    ||||||| ||||| ||||| ||| ||||  |||||||||||||| |||||| ||| |||||||||    
T  41535242 ttcgaaccccggataccccacttattcactttataaggtgaattttagccattagactacctaac 41535306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 80
Target Start/End: Original strand, 41699454 - 41699490
Alignment:
Q  44 ttcatcttataaggtgaattctagccactaggctacc 80  Q
    |||| |||||||||||||||||||||||||| |||||    
T  41699454 ttcaccttataaggtgaattctagccactagactacc 41699490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 3e-17; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 15368858 - 15368919
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| ||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||    
T  15368858 ttcgaaccccggacaccccacttattcattttataaggtgaattctagccactaggctacct 15368919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 37490952 - 37491004
Alignment:
Q  29 cggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  37490952 cggacaccccgcttattcatcttataaggtgaattctagccactaggctacct 37491004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 19793578 - 19793640
Alignment:
Q  19 attcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    |||||||| ||||||||||| ||| |||| |||||||||||||||||| ||||||||||||||    
T  19793578 attcgaaccccggacaccccacttattcaccttataaggtgaattctaaccactaggctacct 19793640  T

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Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 35593815 - 35593877
Alignment:
Q  19 attcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    |||||||| ||||||||||| ||| |||| ||||||||||||||||||||| |||||||||||    
T  35593815 attcgaaccccggacaccccacttattcaccttataaggtgaattctagccgctaggctacct 35593877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 11405509 - 11405570
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| ||||||||||| ||| |||| ||||||||||||||||||||||||| |||||||    
T  11405509 ttcgaaccccggacaccccacttattcaccttataaggtgaattctagccactaagctacct 11405570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 15774354 - 15774293
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| ||||||||||| ||| |||| ||||||||||||||||||||||||| |||||||    
T  15774354 ttcgaaccccggacaccccacttattcaccttataaggtgaattctagccactaagctacct 15774293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 37733808 - 37733869
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| ||||||||||| ||| |||| |||||||||||||||||| ||||||||||||||    
T  37733808 ttcgaaccccggacaccccacttattcaccttataaggtgaattctaaccactaggctacct 37733869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 47939241 - 47939180
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||||||||||||||| ||| |||| ||||| |||||||||||| ||||||||||||||    
T  47939241 ttcgaactccggacaccccacttattcaccttattaggtgaattctaaccactaggctacct 47939180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 81
Target Start/End: Original strand, 9527489 - 9527540
Alignment:
Q  30 ggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||| ||||||    
T  9527489 ggacaccccacttattcatcttataaggtgaattctagccactagactacct 9527540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 3533008 - 3532955
Alignment:
Q  28 ccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||||||| ||| |||| |||||||||||||||||||| ||||||||||||    
T  3533008 ccggacaccccacttattcaccttataaggtgaattctagctactaggctacct 3532955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 4354147 - 4354086
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    |||||||| |||||||||| ||| |||| ||||||| ||||||||||||||| |||||||||    
T  4354147 ttcgaacttcggacaccccacttattcaccttataaagtgaattctagccaccaggctacct 4354086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 39433411 - 39433468
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggct 77  Q
    |||||||  |||||||||| ||| |||| |||||||||||||||||||||||||||||    
T  39433411 ttcgaacctcggacaccccacttattcaccttataaggtgaattctagccactaggct 39433468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 46116216 - 46116155
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| |||||||||||  || |||| |||||||||||||||||| ||||||||||||||    
T  46116216 ttcgaaccccggacaccccaattattcaccttataaggtgaattctaaccactaggctacct 46116155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 48110582 - 48110643
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    |||||||  |||||||| | ||| |||||||||||||||||| |||||||||||||||||||    
T  48110582 ttcgaacctcggacacctcacttattcatcttataaggtgaaatctagccactaggctacct 48110643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 41677113 - 41677176
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatctt--ataaggtgaattctagccactaggctacct 81  Q
    ||||||||||||||||||| ||| |||| |||  | ||||||||||||||||||||||||||||    
T  41677113 ttcgaactccggacaccccacttattcaccttgaaaaaggtgaattctagccactaggctacct 41677176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 32711186 - 32711132
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactag 74  Q
    ||||||| || |||||||| ||| |||| ||||||||||||||||||||||||||    
T  32711186 ttcgaaccccagacaccccacttattcaccttataaggtgaattctagccactag 32711132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 81
Target Start/End: Complemental strand, 34560385 - 34560319
Alignment:
Q  15 tcagattcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    |||| |||||||  |||||||||| ||| |||| ||||||||||||||||||| |||||| ||||||    
T  34560385 tcaggttcgaacctcggacaccccacttattcaccttataaggtgaattctagtcactagactacct 34560319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 81
Target Start/End: Complemental strand, 38019978 - 38019928
Alignment:
Q  31 gacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    |||||||| ||| |||| ||||||| |||||||||||||||||||||||||    
T  38019978 gacaccccacttattcaccttataaagtgaattctagccactaggctacct 38019928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 39994882 - 39994832
Alignment:
Q  28 ccggacacccctcttgttcatcttataaggtgaattctagccactaggcta 78  Q
    ||||||| ||| ||| |||| ||||||||||||||||||||||||||||||    
T  39994882 ccggacatcccacttattcaccttataaggtgaattctagccactaggcta 39994832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 78
Target Start/End: Original strand, 42832008 - 42832058
Alignment:
Q  28 ccggacacccctcttgttcatcttataaggtgaattctagccactaggcta 78  Q
    ||||||||||| ||| |||| ||||||||||||||||||| ||||||||||    
T  42832008 ccggacaccccacttattcaccttataaggtgaattctagtcactaggcta 42832058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 23464028 - 23463979
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagcc 69  Q
    ||||||| ||||||||||| ||||||||  ||||||||||||||||||||    
T  23464028 ttcgaaccccggacaccccacttgttcactttataaggtgaattctagcc 23463979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 24014650 - 24014589
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||||| |||||||||  || |||| ||||||| | |||||||||||||||||||||||    
T  24014650 ttcgaactctggacaccccaattattcaacttataaagggaattctagccactaggctacct 24014589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 39434671 - 39434728
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggct 77  Q
    |||||||  |||||||||| ||| |||| ||||||||||||||||| |||||||||||    
T  39434671 ttcgaacctcggacaccccacttattcaccttataaggtgaattcttgccactaggct 39434728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 21884628 - 21884687
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctac 79  Q
    ||||||| || |||||||| ||| |||| |||||||||||||||||| ||||||| ||||    
T  21884628 ttcgaaccccagacaccccacttattcaccttataaggtgaattctaaccactagactac 21884687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 79
Target Start/End: Complemental strand, 50859401 - 50859350
Alignment:
Q  28 ccggacacccctcttgttcatcttataaggtgaattctagccactaggctac 79  Q
    ||||||||||| | | |||| |||| ||||||||||||||||||||||||||    
T  50859401 ccggacaccccacatattcaccttaaaaggtgaattctagccactaggctac 50859350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 82
Target Start/End: Complemental strand, 538371 - 538309
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctaccta 82  Q
    ||||||| ||| ||||||| ||| |||| |||||||| |||||||||| || |||||||||||    
T  538371 ttcgaaccccgaacaccccacttattcaccttataagatgaattctagacaataggctaccta 538309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 81
Target Start/End: Complemental strand, 3276485 - 3276435
Alignment:
Q  31 gacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    |||||||  ||| |||| |||| ||||||||||||||||||||||||||||    
T  3276485 gacacccaacttattcaccttacaaggtgaattctagccactaggctacct 3276435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 74
Target Start/End: Complemental strand, 4429500 - 4429470
Alignment:
Q  44 ttcatcttataaggtgaattctagccactag 74  Q
    |||||||||||||||||||||||||||||||    
T  4429500 ttcatcttataaggtgaattctagccactag 4429470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 81
Target Start/End: Original strand, 4616937 - 4616987
Alignment:
Q  31 gacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    |||||||| ||| |||| ||||||| |||||||||||||||||| ||||||    
T  4616937 gacaccccacttattcaccttataaagtgaattctagccactagactacct 4616987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 6014560 - 6014514
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattcta 66  Q
    |||||| |||||||||||| ||| |||| ||||||||||||||||||    
T  6014560 ttcgaattccggacaccccacttattcaccttataaggtgaattcta 6014514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 24662033 - 24662087
Alignment:
Q  18 gattcgaactccggacacccctcttgttcatcttataaggtgaattctagccact 72  Q
    ||||||||| || ||||||||  || |||| ||||||||||||||||||||||||    
T  24662033 gattcgaaccccagacaccccatttattcaacttataaggtgaattctagccact 24662087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 40814800 - 40814754
Alignment:
Q  28 ccggacacccctcttgttcatcttataaggtgaattctagccactag 74  Q
    ||||||||||| |||| ||| |||||||||| |||||||||||||||    
T  40814800 ccggacaccccgcttgctcaccttataaggtaaattctagccactag 40814754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 8364450 - 8364389
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| ||| || |||| ||| |||| ||| ||||||||||||||| |||||||||||||    
T  8364450 ttcgaaccccgaacgccccacttattcaccttttaaggtgaattctagtcactaggctacct 8364389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 81
Target Start/End: Complemental strand, 11907317 - 11907280
Alignment:
Q  44 ttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||| ||||||||||||||||| ||||||||||||||    
T  11907317 ttcatattataaggtgaattctaaccactaggctacct 11907280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 73
Target Start/End: Original strand, 12866201 - 12866230
Alignment:
Q  44 ttcatcttataaggtgaattctagccacta 73  Q
    ||||||||||||||||||||||||||||||    
T  12866201 ttcatcttataaggtgaattctagccacta 12866230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 22346496 - 22346533
Alignment:
Q  44 ttcatcttataaggtgaattctagccactaggctacct 81  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  22346496 ttcaccttataaggtgaactctagccactaggctacct 22346533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 24636777 - 24636838
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||||||||||||| | ||| |||| || ||||||| ||||||||||| ||| ||||||    
T  24636777 ttcgaactccggacacctcacttattcacctgataaggtaaattctagccattagactacct 24636838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 30649146 - 30649207
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| || |||||||| ||| |||| ||||||| ||||||||||||||| | |||||||    
T  30649146 ttcgaaccccagacaccccacttattcaccttataacgtgaattctagccacaatgctacct 30649207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 44803280 - 44803333
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccacta 73  Q
    ||||||| ||| ||||||  ||| ||||||||||||| ||||||||||||||||    
T  44803280 ttcgaaccccgtacaccctacttattcatcttataagatgaattctagccacta 44803333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 1031640 - 1031688
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagc 68  Q
    ||||||| ||| ||||||| ||| |||| ||||||||||||||||||||    
T  1031640 ttcgaaccccgaacaccccacttattcaccttataaggtgaattctagc 1031688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 81
Target Start/End: Complemental strand, 9408619 - 9408587
Alignment:
Q  49 cttataaggtgaattctagccactaggctacct 81  Q
    ||||||||||||||||||||||||| |||||||    
T  9408619 cttataaggtgaattctagccactaagctacct 9408587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 9768851 - 9768788
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatctt--ataaggtgaattctagccactaggctacct 81  Q
    ||||||| ||||||||||| ||| |||| |||  | ||||||||||||||| ||||||||||||    
T  9768851 ttcgaaccccggacaccccacttattcaccttgaaaaaggtgaattctagctactaggctacct 9768788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 9976426 - 9976363
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatctt--ataaggtgaattctagccactaggctacct 81  Q
    ||||||||||||||||||| ||| |||| |||  | || ||||||||||||||||| |||||||    
T  9976426 ttcgaactccggacaccccacttattcaccttgaaaaaagtgaattctagccactacgctacct 9976363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 12553247 - 12553310
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatctt--ataaggtgaattctagccactaggctacct 81  Q
    ||||||| ||||||||||| ||| ||||  ||  | ||||||||||||||||||||||||||||    
T  12553247 ttcgaaccccggacaccccacttattcactttgaaaaaggtgaattctagccactaggctacct 12553310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 32635193 - 32635253
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaa-ttctagccactaggctac 79  Q
    ||||||| ||||||||||| ||| |||| ||||  ||||||| ||||||||||||||||||    
T  32635193 ttcgaaccccggacaccccacttattcaccttaagaggtgaatttctagccactaggctac 32635253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 40061496 - 40061557
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaat---tctagccactaggctac 79  Q
    ||||||||||||||||||| ||| |||||||| ||||||| ||   |||||||||||||||||    
T  40061496 ttcgaactccggacaccccacttattcatctt-taaggtggatttctctagccactaggctac 40061557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 50199518 - 50199455
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatctt--ataaggtgaattctagccactaggctacct 81  Q
    ||||||| ||||||||||| ||| |||| |||  | ||||| ||||||||||||||||||||||    
T  50199518 ttcgaaccccggacaccccacttattcaccttgaaaaaggtcaattctagccactaggctacct 50199455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 5e-16; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 10098176 - 10098239
Alignment:
Q  18 gattcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||||| ||||||||||| ||| ||||||||||||| ||||||||||||||||| ||||||    
T  10098176 gattcgaaccccggacaccccacttattcatcttataagatgaattctagccactagactacct 10098239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 21476123 - 21476064
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctac 79  Q
    ||||||||||||||| ||| ||| |||||||||||| |||||||||||||||||||||||    
T  21476123 ttcgaactccggacatcccacttattcatcttataaagtgaattctagccactaggctac 21476064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 29269359 - 29269296
Alignment:
Q  18 gattcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||||| ||||||||||| ||| ||||||||||| |||||||| |||||||||||||||||    
T  29269359 gattcgaaccccggacaccccacttattcatcttatatggtgaattttagccactaggctacct 29269296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 3465636 - 3465697
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| ||||||||||| ||| |||| |||||||||||||||||||||||||| ||||||    
T  3465636 ttcgaaccccggacaccccacttattcaccttataaggtgaattctagccactagactacct 3465697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 20753167 - 20753106
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| ||||||||| | ||| |||| |||||||||||||||||||||||||||||||||    
T  20753167 ttcgaaccccggacaccacacttattcaccttataaggtgaattctagccactaggctacct 20753106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 80
Target Start/End: Complemental strand, 28221349 - 28221289
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacc 80  Q
    ||||||| ||||||||||| ||| |||| |||||||||||||||||| |||||||||||||    
T  28221349 ttcgaaccccggacaccccacttattcaccttataaggtgaattctaaccactaggctacc 28221289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 39992888 - 39992952
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacctaac 84  Q
    |||||| || ||||||||| ||| |||| ||||||||||||||||||||||||||||||| ||||    
T  39992888 ttcgaattctggacaccccacttattcaccttataaggtgaattctagccactaggctacttaac 39992952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 31578068 - 31578131
Alignment:
Q  18 gattcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||||  ||||||||||| ||| ||||  ||||||||||||||||||||||||||||||||    
T  31578068 gattcgaaacccggacaccccacttattcacattataaggtgaattctagccactaggctacct 31578131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 41943959 - 41944021
Alignment:
Q  19 attcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    |||||||| ||||||||||  ||| |||| ||||||||||||||||||||| |||||||||||    
T  41943959 attcgaaccccggacaccctacttattcaccttataaggtgaattctagccgctaggctacct 41944021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 2487364 - 2487401
Alignment:
Q  44 ttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||||||||||||||||||||||||||||||||||    
T  2487364 ttcatcttataaggtgaattctagccactaggctacct 2487401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 17859831 - 17859892
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| ||| ||||| | ||| |||| |||||||||||||||||||||||||||||||||    
T  17859831 ttcgaaccccgaacacctcacttattcaccttataaggtgaattctagccactaggctacct 17859892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 84
Target Start/End: Complemental strand, 27584085 - 27584036
Alignment:
Q  35 cccctcttgttcatcttataaggtgaattctagccactaggctacctaac 84  Q
    |||| ||| |||| ||||||||||||||||||||||||||||||||||||    
T  27584085 ccccacttattcaccttataaggtgaattctagccactaggctacctaac 27584036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 30152175 - 30152228
Alignment:
Q  28 ccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||||||| ||| |||| |||||||||||||||||||||| ||||||||||    
T  30152175 ccggacaccccacttattcaccttataaggtgaattctagccaataggctacct 30152228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 30295566 - 30295627
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| || |||||||| ||| |||| |||| ||||||||||||||||||||||||||||    
T  30295566 ttcgaaccccagacaccccacttattcaccttagaaggtgaattctagccactaggctacct 30295627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 30324468 - 30324529
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| || |||||||| ||| |||| |||| ||||||||||||||||||||||||||||    
T  30324468 ttcgaaccccagacaccccacttattcaccttagaaggtgaattctagccactaggctacct 30324529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 36008328 - 36008389
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| ||| ||||||| ||| |||| ||||||||||||||||||||||||| |||||||    
T  36008328 ttcgaaccccgaacaccccacttattcaccttataaggtgaattctagccactaagctacct 36008389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 37274633 - 37274694
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| ||||||||||| ||| ||||||||||||||| ||||||||||| |||| |||||    
T  37274633 ttcgaaccccggacaccccacttattcatcttataaggtaaattctagccattaggttacct 37274694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 41003214 - 41003153
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||||||||||||||| ||| |||| |||| ||| ||||||||| ||||||||||||||    
T  41003214 ttcgaactccggacaccccacttattcaccttacaagatgaattctaaccactaggctacct 41003153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 53698022 - 53697961
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| ||||||||||| ||| || | |||||||||||||||||||| ||||||||||||    
T  53698022 ttcgaaccccggacaccccacttatttaccttataaggtgaattctagcaactaggctacct 53697961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 12820437 - 12820389
Alignment:
Q  30 ggacacccctcttgttcatcttataaggtgaattctagccactaggcta 78  Q
    ||||||||| ||| |||| ||||||||||||||||||||||||||||||    
T  12820437 ggacaccccacttattcaccttataaggtgaattctagccactaggcta 12820389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 24234113 - 24234065
Alignment:
Q  23 gaactccggacacccctcttgttcatcttataaggtgaattctagccac 71  Q
    |||| ||||||||||| ||| ||||||||||||||||||||||||||||    
T  24234113 gaaccccggacaccccacttattcatcttataaggtgaattctagccac 24234065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 35451163 - 35451099
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacctaac 84  Q
    |||||||| |||||||| | ||| |||| |||||||| ||||||||||||||||| |||||||||    
T  35451163 ttcgaactacggacacctcacttattcaccttataagatgaattctagccactagactacctaac 35451099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 37032223 - 37032172
Alignment:
Q  18 gattcgaactccggacacccctcttgttcatcttataaggtgaattctagcc 69  Q
    ||||||||| ||||||||||| ||| |||| |||||||||||||||||||||    
T  37032223 gattcgaaccccggacaccccacttattcaccttataaggtgaattctagcc 37032172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 78
Target Start/End: Original strand, 12856237 - 12856295
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggcta 78  Q
    ||||||| ||||||||||| ||| |||| |||||||||||||||||| |||||| ||||    
T  12856237 ttcgaaccccggacaccccacttattcaccttataaggtgaattctaaccactatgcta 12856295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 47017988 - 47017938
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagcca 70  Q
    ||||||| ||||||||||| ||| |||| ||||||||||||||||||||||    
T  47017988 ttcgaaccccggacaccccacttattcaccttataaggtgaattctagcca 47017938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 15021478 - 15021539
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| ||| ||| ||| ||| |||| ||||||||||||||| |||||||||||||||||    
T  15021478 ttcgaaccccgaacagcccacttattcaccttataaggtgaattatagccactaggctacct 15021539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 31601856 - 31601909
Alignment:
Q  17 agattcgaactccggacacccctcttgttcatcttataaggtgaattctagcca 70  Q
    |||||||||| ||||||||||| ||| |||| |||||||| |||||||||||||    
T  31601856 agattcgaaccccggacaccccacttattcaccttataagatgaattctagcca 31601909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 81
Target Start/End: Complemental strand, 33944381 - 33944344
Alignment:
Q  44 ttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  33944381 ttcattttataaggtgaattctagccactaggctacct 33944344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 43143773 - 43143834
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||||||||||||||| ||| |||| ||||||| ||||||| |||  ||||||||||||    
T  43143773 ttcgaactccggacaccccacttattcaccttataaagtgaattttagagactaggctacct 43143834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 44074914 - 44074967
Alignment:
Q  28 ccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||||||| ||| |||| ||||||||||||||| |||||| ||||||||||    
T  44074914 ccggacaccccacttattcaccttataaggtgaattttagccattaggctacct 44074967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 52587381 - 52587324
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggct 77  Q
    ||||||| ||||||||| | ||| |||||||||||| ||||||||||||||| |||||    
T  52587381 ttcgaaccccggacacctcacttattcatcttataaagtgaattctagccacgaggct 52587324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 81
Target Start/End: Complemental strand, 54304947 - 54304910
Alignment:
Q  44 ttcatcttataaggtgaattctagccactaggctacct 81  Q
    |||| |||||||||||||||||||||||||||||||||    
T  54304947 ttcagcttataaggtgaattctagccactaggctacct 54304910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 5430407 - 5430347
Alignment:
Q  20 ttcgaactccggacacccctcttg-ttcatcttataaggtgaattctagccactaggctac 79  Q
    ||||||| ||||||||||| |||  |||| |||||||| ||||||||||||||||||||||    
T  5430407 ttcgaaccccggacaccccactttattcaccttataagatgaattctagccactaggctac 5430347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 6637764 - 6637716
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagc 68  Q
    ||||||| ||| ||||||| ||| |||||||||||||||||||||||||    
T  6637764 ttcgaaccccgaacaccccacttattcatcttataaggtgaattctagc 6637716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 34773725 - 34773673
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccact 72  Q
    ||||||| ||||||||||| ||| ||||  |||||||||||||||||||||||    
T  34773725 ttcgaaccccggacaccccacttattcactttataaggtgaattctagccact 34773673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 9285701 - 9285642
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctac 79  Q
    ||||||| || |||||||| ||| || | |||||||||||||||||||||||||| ||||    
T  9285701 ttcgaaccccagacaccccacttattaaccttataaggtgaattctagccactagactac 9285642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 15638739 - 15638802
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacctaa 83  Q
    |||||| |||||||||||   || ||||||||||||||||||||||| ||||| || |||||||    
T  15638739 ttcgaattccggacaccctatttattcatcttataaggtgaattctaaccactgggttacctaa 15638802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 20266918 - 20266977
Alignment:
Q  23 gaactccggacacccct-cttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    |||| |||||||||||  ||| |||| ||||||||||||||||||||||| |||||||||    
T  20266918 gaaccccggacacccccacttattcaccttataaggtgaattctagccaccaggctacct 20266977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 22478784 - 22478721
Alignment:
Q  18 gattcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||||| |||||||||||  || |||| |||||||||||||||||| | |||||| |||||    
T  22478784 gattcgaaccccggacaccccatttattcaccttataaggtgaattctaactactaggttacct 22478721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 32885741 - 32885800
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctac 79  Q
    |||||||  |||||||||| ||| |||| |||||||||||||||||| |||||| |||||    
T  32885741 ttcgaacctcggacaccccacttattcaccttataaggtgaattctatccactaagctac 32885800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 36257747 - 36257806
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctac 79  Q
    ||||||| ||||||||||| ||| ||||  ||| || |||||||||||||||||||||||    
T  36257747 ttcgaaccccggacaccccacttattcactttaaaaagtgaattctagccactaggctac 36257806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 49039487 - 49039421
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatctt--ataaggtgaattctagccactaggctacctaac 84  Q
    ||||||| ||||||||||| ||| |||| |||  | |||||||||||||||||||||||||| ||||    
T  49039487 ttcgaaccccggacaccccacttattcaccttgaaaaaggtgaattctagccactaggctacttaac 49039421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 56314814 - 56314877
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacctaa 83  Q
    |||||||  |||||||| | ||| ||||  ||| ||||||||||||||||||||||||||||||    
T  56314814 ttcgaaccacggacaccacacttattcacattaaaaggtgaattctagccactaggctacctaa 56314877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 81
Target Start/End: Complemental strand, 548918 - 548868
Alignment:
Q  31 gacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    |||||||| ||| |||| ||||||||||||||| |||| ||||||||||||    
T  548918 gacaccccacttattcaccttataaggtgaattttagctactaggctacct 548868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 10757817 - 10757767
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagcca 70  Q
    ||||||| ||||||||||| ||| |||| |||||||||| |||||||||||    
T  10757817 ttcgaaccccggacaccccacttattcaccttataaggtaaattctagcca 10757767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 10970988 - 10970938
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagcca 70  Q
    ||||||| ||||||||||| ||| |||| |||||||||| |||||||||||    
T  10970988 ttcgaaccccggacaccccacttattcaccttataaggtaaattctagcca 10970938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 35747524 - 35747482
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaat 62  Q
    ||||||||||||||||||| ||| |||| ||||||||||||||    
T  35747524 ttcgaactccggacaccccacttattcaccttataaggtgaat 35747482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 35803135 - 35803089
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattcta 66  Q
    |||||||||  |||||||| ||| |||||||||||||||||||||||    
T  35803135 ttcgaactctcgacaccccacttattcatcttataaggtgaattcta 35803089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 48512260 - 48512306
Alignment:
Q  28 ccggacacccctcttgttcatcttataaggtgaattctagccactag 74  Q
    ||||||||||| ||| |||| ||||||||||||||| ||||||||||    
T  48512260 ccggacaccccacttattcaccttataaggtgaattttagccactag 48512306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 3442896 - 3442957
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| || |||||||| ||| |||| |||||||||||||||||| ||| ||| ||||||    
T  3442896 ttcgaaccccagacaccccacttattcaccttataaggtgaattctaaccagtagactacct 3442957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 6330970 - 6330925
Alignment:
Q  28 ccggacacccctcttgttcatcttataaggtgaattctagccacta 73  Q
    ||||||||||| ||| |||| ||||||||||||||| |||||||||    
T  6330970 ccggacaccccacttattcaccttataaggtgaattttagccacta 6330925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 13073189 - 13073136
Alignment:
Q  28 ccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| ||| ||| || | |||||||||||||||||||| ||||||||||||    
T  13073189 ccggacatcccacttattaaccttataaggtgaattctagctactaggctacct 13073136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 31156262 - 31156201
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||||||||| ||| | ||| ||||  ||| || |||||||||||||||||||||||||    
T  31156262 ttcgaactccggataccgcacttattcactttaaaaagtgaattctagccactaggctacct 31156201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 38433364 - 38433425
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| || |||||||| ||| |||| |||||||||||||||||| | |||| |||||||    
T  38433364 ttcgaaccccagacaccccacttattcaccttataaggtgaattctaacaactaagctacct 38433425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 79
Target Start/End: Complemental strand, 49280701 - 49280652
Alignment:
Q  30 ggacacccctcttgttcatcttataaggtgaattctagccactaggctac 79  Q
    ||||||| | ||| |||| |||||||||||||||||| ||||||||||||    
T  49280701 ggacacctcacttattcaccttataaggtgaattctaaccactaggctac 49280652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 51536936 - 51536973
Alignment:
Q  44 ttcatcttataaggtgaattctagccactaggctacct 81  Q
    |||||||||| |||||||||||||||||||| ||||||    
T  51536936 ttcatcttatcaggtgaattctagccactagactacct 51536973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 52560841 - 52560878
Alignment:
Q  44 ttcatcttataaggtgaattctagccactaggctacct 81  Q
    |||| |||||||||||||||||||||||||| ||||||    
T  52560841 ttcaccttataaggtgaattctagccactagactacct 52560878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 52743284 - 52743321
Alignment:
Q  44 ttcatcttataaggtgaattctagccactaggctacct 81  Q
    |||| |||||||||||||||||||| ||||||||||||    
T  52743284 ttcaccttataaggtgaattctagctactaggctacct 52743321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 9084810 - 9084858
Alignment:
Q  18 gattcgaactccggacacccctcttgttcatcttataaggtgaattcta 66  Q
    |||||||||  |||||||||| ||| ||||||||||||||| |||||||    
T  9084810 gattcgaacctcggacaccccacttattcatcttataaggtaaattcta 9084858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 11491261 - 11491200
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaat---tctagccactaggctac 79  Q
    ||||||| ||||||||||| ||| |||||||| ||||||||||   |||||||||||||||||    
T  11491261 ttcgaaccccggacaccccacttattcatctt-taaggtgaatttctctagccactaggctac 11491200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 20610792 - 20610855
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataa--ggtgaattctagccactaggctacct 81  Q
    ||||||||||||||| ||| ||| |||| |||| ||  ||||||||||||||||||| ||||||    
T  20610792 ttcgaactccggacatcccacttattcaccttaaaaaaggtgaattctagccactagactacct 20610855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 81
Target Start/End: Original strand, 37739188 - 37739220
Alignment:
Q  49 cttataaggtgaattctagccactaggctacct 81  Q
    |||||||||||||||||||||||||| ||||||    
T  37739188 cttataaggtgaattctagccactagactacct 37739220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 73
Target Start/End: Complemental strand, 44374112 - 44374068
Alignment:
Q  29 cggacacccctcttgttcatcttataaggtgaattctagccacta 73  Q
    |||||||||| ||| || ||||||||||||||||||||| |||||    
T  44374112 cggacaccccacttatttatcttataaggtgaattctagtcacta 44374068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 451417 - 451364
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccacta 73  Q
    ||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||    
T  451417 ttcgaactccggacaccccacttattcatcttataagatgaattctagccacta 451364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 26873 - 26809
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacctaac 84  Q
    |||||||||| |||||||| ||| ||||| ||||||||||||||||| ||| |||||||||||||    
T  26873 ttcgaactccagacaccccacttattcattttataaggtgaattctaaccattaggctacctaac 26809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 81
Target Start/End: Complemental strand, 185530 - 185493
Alignment:
Q  44 ttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  185530 ttcatcttataaggtgaattctagctactaggctacct 185493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0687 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 79
Target Start/End: Original strand, 1482 - 1533
Alignment:
Q  28 ccggacacccctcttgttcatcttataaggtgaattctagccactaggctac 79  Q
    ||||||||||| ||| ||||||||||| ||||||||||||||||||||||||    
T  1482 ccggacaccccacttattcatcttatagggtgaattctagccactaggctac 1533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 49873 - 49934
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||| ||| ||||||| ||| |||| |||||||||||||||||||||||||| ||||||    
T  49873 ttcgaaccccgtacaccccacttattcaacttataaggtgaattctagccactagactacct 49934  T

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Target: scaffold1086 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1086
Description:

Target: scaffold1086; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 2544 - 2602
Alignment:
Q  23 gaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    |||| ||||||||||| ||| |||| |||||||||||||||| ||||||||| ||||||    
T  2544 gaaccccggacaccccacttattcaccttataaggtgaattccagccactagactacct 2602  T

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Target: scaffold0533 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 78
Target Start/End: Original strand, 9379 - 9437
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggcta 78  Q
    |||||| |||| |||| || ||| |||| ||||||||||||||||||||||||||||||    
T  9379 ttcgaattccgaacactccacttattcaccttataaggtgaattctagccactaggcta 9437  T

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Target: scaffold0020 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 166649 - 166703
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactag 74  Q
    ||||||| |||||||| || ||| |||||||||||||||||||||||| ||||||    
T  166649 ttcgaaccccggacactccacttattcatcttataaggtgaattctagtcactag 166703  T

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Target: scaffold1990 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold1990
Description:

Target: scaffold1990; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 31 - 74
Target Start/End: Original strand, 958 - 1001
Alignment:
Q  31 gacacccctcttgttcatcttataaggtgaattctagccactag 74  Q
    |||||||| ||| |||| ||||||||||||||||||||||||||    
T  958 gacaccccacttattcaccttataaggtgaattctagccactag 1001  T

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Target: scaffold0178 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 4376 - 4439
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacctaa 83  Q
    ||||||| |||||||| || ||| ||||  |||||||||||||||||| |||||| ||||||||    
T  4376 ttcgaaccccggacactccacttattcactttataaggtgaattctagacactagactacctaa 4439  T

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Target: scaffold0092 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 31 - 74
Target Start/End: Complemental strand, 47348 - 47305
Alignment:
Q  31 gacacccctcttgttcatcttataaggtgaattctagccactag 74  Q
    |||||||| ||| |||| ||||||||||||||||||||||||||    
T  47348 gacaccccacttattcaccttataaggtgaattctagccactag 47305  T

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Target: scaffold1112 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1112
Description:

Target: scaffold1112; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 2481 - 2421
Alignment:
Q  18 gattcgaactccggacacccctcttgttcatcttataaggtgaattctagccactaggctacct 81  Q
    ||||||||  ||||||||||| ||| |||||||||   |||||||| |||||||||||||||||    
T  2481 gattcgaatcccggacaccccacttattcatctta---ggtgaattttagccactaggctacct 2421  T

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Target: scaffold0001 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 419765 - 419826
Alignment:
Q  20 ttcgaactccggacacccctcttgttcatcttataaggtgaat---tctagccactaggctac 79  Q
    ||||||| ||||||||||| ||| |||||||| ||||||||||   |||||||||||||||||    
T  419765 ttcgaaccccggacaccccacttattcatctt-taaggtgaatttctctagccactaggctac 419826  T

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