View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17437_low_13 (Length: 304)
Name: NF17437_low_13
Description: NF17437
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17437_low_13 |
 | |
|
Alignment Details
Target: chr3 (Bit Score: 237; Significance: 1e-131; HSPs: 6)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 15 - 287
Target Start/End: Original strand, 54800301 - 54800573
Alignment:
| Q |
15 |
aatattaaaggcaaacaattaatatttaactttaatgaaaatcttttagaatctccacttgatacttagttcttcatctatattatatggactatttggt |
114 |
Q |
| |
|
|||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
54800301 |
aatattaaaggcaaacaattaacatttagctttaatgaaaatcttttagaatctccacttgatacttagttcttcatctatattatatggactatttggt |
54800400 |
T |
|
| Q |
115 |
tgtccctttagattatgtttgaaactcaatagttgtttcttatgcacttgtgctgttctatttcatttatatgcttcaatattgtcatgatctacttaat |
214 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||||| | || |||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
54800401 |
tgtccctttagattatgtttgaaactgaatagttgtttcttatgcacttatacttttctatttcatttatatgcttcaatactgtcatgatctacttaat |
54800500 |
T |
|
| Q |
215 |
atgctcaacttcagtcccttcacatttacttacctactacttcttttttgatgcaaaggcaaaatatacttct |
287 |
Q |
| |
|
||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
54800501 |
atgctcaacgtcaatcccttcacatttacttacctactacttcttttttgatgcaaaggcaaaatatacttct |
54800573 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 188 - 285
Target Start/End: Complemental strand, 19836118 - 19836018
Alignment:
| Q |
188 |
cttcaatattgtcatgatctacttaatatgctcaacttcagtcccttcacatttacttacct-actactt--cttttttgatgcaaaggcaaaatatact |
284 |
Q |
| |
|
|||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||| ||||| |
|
|
| T |
19836118 |
cttcaatattgtcatgatcttcataataggctcaacttcagtcccttcacatttacttacctaactactttctttttttgttgcaaaggcaaaagatact |
19836019 |
T |
|
| Q |
285 |
t |
285 |
Q |
| |
|
| |
|
|
| T |
19836018 |
t |
19836018 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 155
Target Start/End: Original strand, 19840500 - 19840546
Alignment:
| Q |
109 |
tttggttgtccctttagattatgtttgaaactcaatagttgtttctt |
155 |
Q |
| |
|
|||||||||||||||||||||||||||||| | |||| | ||||||| |
|
|
| T |
19840500 |
tttggttgtccctttagattatgtttgaaaatgaatactggtttctt |
19840546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 54493514 - 54493480
Alignment:
| Q |
16 |
atattaaaggcaaacaattaatatttaactttaat |
50 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||| |
|
|
| T |
54493514 |
atattaaaggcaaacaattaacatttaactttaat |
54493480 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 252
Target Start/End: Original strand, 20032302 - 20032366
Alignment:
| Q |
188 |
cttcaatattgtcatgatctacttaatatgctcaacttcagtcccttcacatttacttacctact |
252 |
Q |
| |
|
||||||||||| |||||| | | ||||| |||||||||| |||||||||||||| | ||||||| |
|
|
| T |
20032302 |
cttcaatattgccatgatttgcataatagtctcaacttcaatcccttcacatttattcacctact |
20032366 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 252
Target Start/End: Original strand, 20034471 - 20034535
Alignment:
| Q |
188 |
cttcaatattgtcatgatctacttaatatgctcaacttcagtcccttcacatttacttacctact |
252 |
Q |
| |
|
||||||||||| |||||| | | ||||| |||||||||| |||||||||||||| | ||||||| |
|
|
| T |
20034471 |
cttcaatattgccatgatttgcataatagtctcaacttcaatcccttcacatttattcacctact |
20034535 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 174; Significance: 1e-93; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 16 - 285
Target Start/End: Complemental strand, 31309261 - 31308992
Alignment:
| Q |
16 |
atattaaaggcaaacaattaatatttaactttaatgaaaatcttttagaatctccacttgatacttagttcttcatctatattatatggactatttggtt |
115 |
Q |
| |
|
||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| |
|
|
| T |
31309261 |
atattaaaggcaaacaattaacagttagttttaatgaaaatcttttagaatctccacttgatacttgcttcttcatctatgttatatggactatttggtt |
31309162 |
T |
|
| Q |
116 |
gtccctttagattatgtttgaaactcaatagttgtttcttatgcacttgtgctgttctatttcatttatatgcttcaatattgtcatgatctacttaata |
215 |
Q |
| |
|
||| ||||||||||||||||||| | ||| |||||||||| ||||| | |||| |||||||||||| |||||||||| ||||||||||||||||||||| |
|
|
| T |
31309161 |
gtctctttagattatgtttgaaattgaattgttgtttcttctgcacctatgcttttctatttcattcctatgcttcaacattgtcatgatctacttaata |
31309062 |
T |
|
| Q |
216 |
tgctcaacttcagtcccttcacatttacttacctactacttcttttttgatgcaaaggcaaaatatactt |
285 |
Q |
| |
|
|||||||||||| |||||||||||||||||||| |||||||||||||| |||||| |||||||||||| |
|
|
| T |
31309061 |
ggctcaacttcagccccttcacatttacttacctgctacttcttttttgttgcaaaaacaaaatatactt |
31308992 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 16 - 176
Target Start/End: Original strand, 4287168 - 4287327
Alignment:
| Q |
16 |
atattaaaggcaaacaattaatatttaactttaatgaaaatcttttagaatctccacttgatacttagttcttcatctatattatatggactatttggtt |
115 |
Q |
| |
|
|||||||||||||||| |||| | ||| ||||||||||||||||||||||| ||||||||||| || ||||||||||||| ||||||||||||||||||| |
|
|
| T |
4287168 |
atattaaaggcaaacacttaacagttagctttaatgaaaatcttttagaatatccacttgata-ttggttcttcatctatgttatatggactatttggtt |
4287266 |
T |
|
| Q |
116 |
gtccctttagattatgtttgaaactcaatagttgtttcttatgcacttgtgctgttctatt |
176 |
Q |
| |
|
|| |||||||||||| ||||||||| |||||||||||||| ||||| | |||| ||||||| |
|
|
| T |
4287267 |
gttcctttagattatatttgaaactgaatagttgtttcttctgcacctatgcttttctatt |
4287327 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 142 - 282
Target Start/End: Original strand, 23678054 - 23678194
Alignment:
| Q |
142 |
aatagttgtttcttatgcacttgtgctgttctatttcatttatatgcttcaatattgtcatgatctacttaatatgctcaacttcagtcccttcacattt |
241 |
Q |
| |
|
|||||||||||||| ||||| | || | ||| |||||||| |||| || |||||||| || |||||||||||| |||||||||| || ||| |||||| |
|
|
| T |
23678054 |
aatagttgtttcttctgcacctatgtttttccatttcattcctatgttttaatattgttattatctacttaatagactcaacttcaatcgcttaacattt |
23678153 |
T |
|
| Q |
242 |
acttacctactacttcttttttgatgcaaaggcaaaatata |
282 |
Q |
| |
|
| || |||| ||||||||||||| ||||||||||||||||| |
|
|
| T |
23678154 |
attttcctattacttcttttttgttgcaaaggcaaaatata |
23678194 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 226 - 285
Target Start/End: Original strand, 4287329 - 4287388
Alignment:
| Q |
226 |
cagtcccttcacatttacttacctactacttcttttttgatgcaaaggcaaaatatactt |
285 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| |
|
|
| T |
4287329 |
cagtcccttcacatttacttacctactacttcttttttgttgcaaaggcaaaatacactt |
4287388 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 167; Significance: 2e-89; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 16 - 285
Target Start/End: Complemental strand, 23565868 - 23565602
Alignment:
| Q |
16 |
atattaaaggcaaacaattaatatttaactttaatgaaaatcttttagaatctccacttgatacttagttcttcatctatattatatggactatttggtt |
115 |
Q |
| |
|
||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |
|
|
| T |
23565868 |
atattaaaggcaaacaattaacggttagccttaatgaaaatcttttagaatctccacttgatacta--ttcttcatctatattatatggactatttgatt |
23565771 |
T |
|
| Q |
116 |
gtccctttagattatgtttgaaactcaatagttgtttcttatgcacttgtgctgttctatttcatttatatgcttcaatattgtcatgatctacttaata |
215 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||| ||||| | |||| || ||||||||| |||||||||||||||||||| |||||||||||| |
|
|
| T |
23565770 |
gtccctttagattatgtttgaaactgaatagttgtttcttctgcacctatgcttttatatttcattcatatgcttcaatattgtcat-atctacttaata |
23565672 |
T |
|
| Q |
216 |
tgctcaacttcagtcccttcacatttacttacctactacttcttttttgatgcaaaggcaaaatatactt |
285 |
Q |
| |
|
||||||||||| ||||||||||| ||||||||| |||||||||||| |||||||||||||||||||| |
|
|
| T |
23565671 |
ggctcaacttcactcccttcacataaacttacctagtacttcttttttattgcaaaggcaaaatatactt |
23565602 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 16 - 285
Target Start/End: Complemental strand, 33852829 - 33852560
Alignment:
| Q |
16 |
atattaaaggcaaacaattaatatttaactttaatgaaaatcttttagaatctccacttgatacttagttcttcatctatattatatggactatttggtt |
115 |
Q |
| |
|
||||||||| ||||||||||| | ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |
|
|
| T |
33852829 |
atattaaagacaaacaattaacagttaactttaatgaaaatgttttagaatctccacttgatacttggttcttcatctatgttatatggactatttggtt |
33852730 |
T |
|
| Q |
116 |
gtccctttagattatgtttgaaactcaatagttgtttcttatgcacttgtgctgttctatttcatttatatgcttcaatattgtcatgatctacttaata |
215 |
Q |
| |
|
||||||||||||||||||||| ||| |||||||| |||| | ||| | | | ||||||||| || |||||||||||||||| | |||||| |||||| |
|
|
| T |
33852729 |
gtccctttagattatgtttgatactaaatagttgactcttctacacctatttttttctatttctttcctatgcttcaatattgttacgatctatttaata |
33852630 |
T |
|
| Q |
216 |
tgctcaacttcagtcccttcacatttacttacctactacttcttttttgatgcaaaggcaaaatatactt |
285 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| |
|
|
| T |
33852629 |
tgctcaaactcagtcccttcacatttacttacctaccacttcttttttgttgcaaaggcaaaatatactt |
33852560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 161; Significance: 7e-86; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 16 - 285
Target Start/End: Complemental strand, 43420633 - 43420362
Alignment:
| Q |
16 |
atattaaaggcaaacaattaatatttaactttaatgaaaatcttttagaatctccacttgatacttagttcttcatctatattatatggactatttggtt |
115 |
Q |
| |
|
|||||||| |||||||||||| |||| |||||||||||||||||||||||||| |||||||| || ||||||||||||| ||||||||||||||||||| |
|
|
| T |
43420633 |
atattaaaagcaaacaattaacatttggctttaatgaaaatcttttagaatctctacttgatatttggttcttcatctatgttatatggactatttggtt |
43420534 |
T |
|
| Q |
116 |
gtccctttagattatgtttgaaactcaatagttgtttcttatgcacttgtgctgttctatttcatttatatgcttcaatattgtcatgatctacttaata |
215 |
Q |
| |
|
||| ||||||||||||||||||| | |||||||||||||| ||||| | | | |||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
43420533 |
gtctctttagattatgtttgaaattgaatagttgtttcttctgcacgtataattttctatttcattcatatgcttcaatattgtcatgatctacttaata |
43420434 |
T |
|
| Q |
216 |
tgctcaacttcagtcccttcac--atttacttacctactacttcttttttgatgcaaaggcaaaatatactt |
285 |
Q |
| |
|
||||||||||||||||||||| ||||||||| ||| | |||||| ||| |||||||||||||||||||| |
|
|
| T |
43420433 |
ggctcaacttcagtcccttcacagatttacttatctattgcttcttcttttttgcaaaggcaaaatatactt |
43420362 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 160; Significance: 3e-85; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 16 - 285
Target Start/End: Complemental strand, 10613709 - 10613447
Alignment:
| Q |
16 |
atattaaaggcaaacaattaatatttaactttaatgaaaatcttttagaatctccacttgatacttagttcttcatctatattatatggactatttggtt |
115 |
Q |
| |
|
|||||||||||||||||| || | ||| |||||||| ||||||||||||||||||||||||||||| || ||||||||| ||||||||||||| |
|
|
| T |
10613709 |
atattaaaggcaaacaatgaacagttagctttaatggaaatcttttagaatctccacttgatacttgatttttcatctat-------ggactatttggtt |
10613617 |
T |
|
| Q |
116 |
gtccctttagattatgtttgaaactcaatagttgtttcttatgcacttgtgctgttctatttcatttatatgcttcaatattgtcatgatctacttaata |
215 |
Q |
| |
|
|| |||||||||||| ||||||||| |||||||||||||| | ||| | || | |||||||||||| |||||||||||||||||| |||||||||||||| |
|
|
| T |
10613616 |
gttcctttagattatatttgaaactgaatagttgtttcttctacacctatgtttttctatttcattcatatgcttcaatattgtcgtgatctacttaata |
10613517 |
T |
|
| Q |
216 |
tgctcaacttcagtcccttcacatttacttacctactacttcttttttgatgcaaaggcaaaatatactt |
285 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
10613516 |
ggctcaacttcagtcccttcacatttacttacctactacttcttttttgttgcaaaggcaaaatatactt |
10613447 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 128; Significance: 3e-66; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 19 - 202
Target Start/End: Complemental strand, 26243974 - 26243791
Alignment:
| Q |
19 |
ttaaaggcaaacaattaatatttaactttaatgaaaatcttttagaatctccacttgatacttagttcttcatctatattatatggactatttggttgtc |
118 |
Q |
| |
|
|||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| || |
|
|
| T |
26243974 |
ttaaaggcaaacaattaacaattagctttaatgaaaatcttttagaatctccacttgatacttggttcttcatctatgttatatggactatttggttatc |
26243875 |
T |
|
| Q |
119 |
cctttagattatgtttgaaactcaatagttgtttcttatgcacttgtgctgttctatttcatttatatgcttcaatattgtcat |
202 |
Q |
| |
|
|||||||||||||||||||| | |||||||||||||| ||||| | |||| |||||||||||| ||||||||||||||||||| |
|
|
| T |
26243874 |
cctttagattatgtttgaaattgaatagttgtttcttctgcacctatgcttttctatttcattcctatgcttcaatattgtcat |
26243791 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 134 - 285
Target Start/End: Complemental strand, 30972109 - 30971959
Alignment:
| Q |
134 |
tgaaactcaatagttgtttcttatgcacttgtgctgttctatttcatttatatgcttcaatattgtcatgatctacttaatatgctcaacttcagtccct |
233 |
Q |
| |
|
||||||| ||||| |||||||| |||||| || | |||||||||||| |||| ||||||||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
30972109 |
tgaaactgaatagctgtttcttctgcactaatgattttctatttcattcttatgtttcaatattatcatgatctacttaataggctcaacttcagtccct |
30972010 |
T |
|
| Q |
234 |
tcacatttacttacctactacttcttttttgatgcaaaggcaaaatatactt |
285 |
Q |
| |
|
| ||||||||||||||||||||| ||||||| |||||||||||||||||||| |
|
|
| T |
30972009 |
taacatttacttacctactactt-ttttttgttgcaaaggcaaaatatactt |
30971959 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 11277376 - 11277267
Alignment:
| Q |
16 |
atattaaaggcaaacaattaatatttaactttaatgaaaatcttttagaatctccacttgatacttagttcttcatctatattatatggactatttggtt |
115 |
Q |
| |
|
||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||| |
|
|
| T |
11277376 |
atattaaaggcaaacaattaacggttagctttaatgaaaatcttttagaatctccacttgatatttgaatcttcatctatgttatatggactatttggtt |
11277277 |
T |
|
| Q |
116 |
gtccctttag |
125 |
Q |
| |
|
|||||||||| |
|
|
| T |
11277276 |
gtccctttag |
11277267 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 188 - 255
Target Start/End: Complemental strand, 9817085 - 9817018
Alignment:
| Q |
188 |
cttcaatattgtcatgatctacttaatatgctcaacttcagtcccttcacatttacttacctactact |
255 |
Q |
| |
|
||||||||||| |||||||||| ||||| |||||||||||||||| | ||||| ||| |||||||| |
|
|
| T |
9817085 |
cttcaatattgccatgatctacataatagcttcaacttcagtccctttatatttatttaactactact |
9817018 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 119; Significance: 8e-61; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 16 - 285
Target Start/End: Original strand, 23597257 - 23597519
Alignment:
| Q |
16 |
atattaaaggcaaacaattaatatttaactttaatgaaaatcttttagaatctccacttgatacttagttcttcatctatattatatggactatttggtt |
115 |
Q |
| |
|
||||||||| ||||||||||| || |||||||||||||||||||||||||| |||| |||||| ||||||||||||| ||||||||||||||| || |
|
|
| T |
23597257 |
atattaaagacaaacaattaactggtagctttaatgaaaatcttttagaatctctactttatactttgttcttcatctatgctatatggactatttgatt |
23597356 |
T |
|
| Q |
116 |
gtccctttagattatgtttgaaactcaatagttgtttcttatgcacttgtgctgttctatttcatttatatgcttcaatattgtcatgatctacttaata |
215 |
Q |
| |
|
||||||||| |||||| ||||| |||||||| ||||| ||||| | || | ||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
23597357 |
gtccctttaaattatg----aaactgaatagttgattcttctgcacctatgtttttctatttcatttctatgcttcaatattgtcatgatctacttaata |
23597452 |
T |
|
| Q |
216 |
tgctcaacttcagtcccttcacatttacttacctactacttcttttttgatgcaaaggcaaaatatactt |
285 |
Q |
| |
|
||||| |||| || | |||||||||||||| |||||| |||||||| || | ||||||||||||||| |
|
|
| T |
23597453 |
ggctcagcttcggttctttcacatttacttatctacta---cttttttgttgtagaggcaaaatatactt |
23597519 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 7275490 - 7275449
Alignment:
| Q |
9 |
tcgaagaatattaaaggcaaacaattaatatttaactttaat |
50 |
Q |
| |
|
||||| |||||||||||||||||||||| | ||||||||||| |
|
|
| T |
7275490 |
tcgaaaaatattaaaggcaaacaattaacagttaactttaat |
7275449 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 6730592 - 6730624
Alignment:
| Q |
16 |
atattaaaggcaaacaattaatatttaacttta |
48 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| |
|
|
| T |
6730592 |
atattaaaggcaaacaattaatagttaacttta |
6730624 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University