View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17437_low_7 (Length: 363)

Name: NF17437_low_7
Description: NF17437
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17437_low_7
NF17437_low_7
[»] chr2 (20 HSPs)
chr2 (9-347)||(39139611-39139949)
chr2 (22-306)||(39471627-39471894)
chr2 (9-163)||(39412116-39412277)
chr2 (173-274)||(39452050-39452151)
chr2 (192-304)||(39419997-39420111)
chr2 (9-104)||(39154067-39154162)
chr2 (207-345)||(39179531-39179673)
chr2 (169-269)||(39204564-39204663)
chr2 (202-274)||(39224534-39224606)
chr2 (169-306)||(39379675-39379812)
chr2 (209-331)||(39156676-39156800)
chr2 (169-345)||(39386437-39386615)
chr2 (276-349)||(39455096-39455170)
chr2 (226-331)||(39372018-39372125)
chr2 (200-265)||(39126050-39126113)
chr2 (62-111)||(44749361-44749410)
chr2 (180-227)||(39217214-39217261)
chr2 (64-99)||(39451991-39452026)
chr2 (200-264)||(39503675-39503737)
chr2 (171-215)||(44749316-44749360)
[»] chr7 (2 HSPs)
chr7 (36-278)||(19809897-19810139)
chr7 (307-345)||(19810141-19810179)
[»] chr5 (2 HSPs)
chr5 (171-324)||(17060996-17061151)
chr5 (169-306)||(33563145-33563289)
[»] chr8 (2 HSPs)
chr8 (200-258)||(45343524-45343583)
chr8 (62-115)||(45343382-45343437)
[»] chr6 (1 HSPs)
chr6 (199-244)||(16115125-16115170)


Alignment Details
Target: chr2 (Bit Score: 323; Significance: 0; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 323; E-Value: 0
Query Start/End: Original strand, 9 - 347
Target Start/End: Original strand, 39139611 - 39139949
Alignment:
Q  9 gtgagatgaatccttttaagaaataggacaactcatgttgaaattttataaattcaaatacttttagatgataagtaaaaactgtgcaggatatatacaa 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39139611 gtgaaatgaatccttttaagaaataggacaactcatgttgaaattttataaattcaaatacttttagatgataagtaaaaactgtgcaggatatatacaa 39139710  T
Q  109 agatactcagattgatatattagatgttggtaacttggtacgaaatggaactcatttagctggcttcattttgtttcccccaacagttctatcatttgtt 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  39139711 agatactcagattgatatattagatgttggtaacttggtacgaaatggaactcatgtagctggcttcattttgtttcccccaacagttctatcatttgtt 39139810  T
Q  209 aagagaaaattgacatcttggtgttaatgcgtggaaaatgaaatagacttcaaatttatctctcttcatgtatctcttccatgttataaatggtttgatg 308  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  39139811 aagagaaaattgacatcttggtgttaatgcgtggaaaatgaaatagacttcaaattcatctctcttcatgtatctcttccatgttataaatggtttgatg 39139910  T
Q  309 gattttgaattattcagtccaatttccttggttttttgt 347  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  39139911 gattttgaattattcagaccaatttccttggttttttgt 39139949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 22 - 306
Target Start/End: Complemental strand, 39471894 - 39471627
Alignment:
Q  22 ttttaagaaataggacaactcatgttgaaattttataaattcaaatacttttagatgataagtaaaaactgtgcaggatatatacaaagatactcagatt 121  Q
    ||||||||||||||||||||| | ||||||||||| |||||||||||| ||||||||||||||| ||||| ||||                  |||||||    
T  39471894 ttttaagaaataggacaactctttttgaaattttaaaaattcaaatacatttagatgataagtacaaactatgca------------------tcagatt 39471813  T
Q  122 gatatattagatgttggtaacttggtacgaaatggaactcatttagctggcttcattttgtttcccccaacagttctatcatttgttaagagaaaattga 221  Q
     ||||| |||||||| ||||||||||| ||||| |||||||  ||  |||||| ||||||| ||| | ||||||||||||||||||||||||||||||||    
T  39471812 aatatagtagatgtttgtaacttggtatgaaattgaactcacgtaattggctttattttgtgtccgctaacagttctatcatttgttaagagaaaattga 39471713  T
Q  222 catcttggtgttaatgcgtggaaaatgaaatagacttcaaatttatctctc-ttcatgtatctcttccatgttataaatggtttga 306  Q
    ||||||||||||||||  ||||||||||||||||| | || |||| ||||| || ||||||||| | ||| ||  |||||||||||    
T  39471712 catcttggtgttaatgattggaaaatgaaatagacatgaattttacctctcttttatgtatctcatgcattttcgaaatggtttga 39471627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 9 - 163
Target Start/End: Complemental strand, 39412277 - 39412116
Alignment:
Q  9 gtgagatgaatccttttaagaaataggacaactcatgttgaaattttataaattcaaatacttttagatg-------ataagtaaaaactgtgcaggata 101  Q
    |||| ||||||||||||||||||||||||||||| || |  |||||||||||||||||||||||||||||       ||||||||||||| ||||||| |    
T  39412277 gtgaaatgaatccttttaagaaataggacaactcctggtttaattttataaattcaaatacttttagatgataactgataagtaaaaactatgcaggaca 39412178  T
Q  102 tatacaaagatactcagattgatatattagatgttggtaacttggtacgaaatggaactcat 163  Q
    |||||||||||||| ||||| |||||||| || | |||||||||||| | ||| ||||||||    
T  39412177 tatacaaagatactaagattaatatattatatctcggtaacttggtatggaattgaactcat 39412116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 173 - 274
Target Start/End: Original strand, 39452050 - 39452151
Alignment:
Q  173 ttcattttgtttcccccaacagttctatcatttgttaagagaaaattgacatcttggtgttaatgcgtggaaaatgaaatagacttcaaatttatctctc 272  Q
    |||||||||||||||||||| ||| | |||||||||||| ||||||||||||||| |||||||||| ||||||||||||| ||||| |||| ||||||||    
T  39452050 ttcattttgtttcccccaactgttgtctcatttgttaagggaaaattgacatcttagtgttaatgcttggaaaatgaaattgacttgaaatgtatctctc 39452149  T
Q  273 tt 274  Q
    ||    
T  39452150 tt 39452151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 192 - 304
Target Start/End: Complemental strand, 39420111 - 39419997
Alignment:
Q  192 cagttctatcatttgttaagagaaaattgacatcttggtgttaatgcgtggaaaatgaaatagacttcaaatttatctctcttcat--gtatctcttcca 289  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||| || ||||||||||| |||| |||||||||||||||  |  | ||||||||||    
T  39420111 cagttctgtcatttgttaagagaaaattgacatctttgtgttaatgcttgtaaaatgaaatatacttgaaatttatctctctttttacgcatctcttcca 39420012  T
Q  290 tgttataaatggttt 304  Q
    | || ||||||||||    
T  39420011 ttttctaaatggttt 39419997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 39154067 - 39154162
Alignment:
Q  9 gtgagatgaatccttttaagaaataggacaactcatgttgaaattttataaattcaaatacttttagatgataagtaaaaactgtgcaggatatat 104  Q
    |||| ||||||| |||||||||||| |||||||| |||| ||||||  |||| |||||||| ||||||||||||||||||||| ||||||||||||    
T  39154067 gtgaaatgaatcattttaagaaataagacaactcttgtttaaatttgctaaagtcaaatacctttagatgataagtaaaaactatgcaggatatat 39154162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 207 - 345
Target Start/End: Original strand, 39179531 - 39179673
Alignment:
Q  207 ttaagagaaaattgacatcttggtgttaatgcgtggaaaatgaaatagacttcaaatttatctctc----ttcatgtatctcttccatgttataaatggt 302  Q
    |||||||||||||||||||||||| ||||||| | ||||||||| ||||||| |||||||||||||    || |||||||||||| || || ||||||||    
T  39179531 ttaagagaaaattgacatcttggttttaatgctttgaaaatgaattagacttgaaatttatctctctctttttatgtatctcttctattttctaaatggt 39179630  T
Q  303 ttgatggattttgaattattcagtccaatttccttggtttttt 345  Q
    |||||  ||| |||| | |||||| |||| | ||| |||||||    
T  39179631 ttgataaattgtgaaatgttcagttcaatctgcttagtttttt 39179673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 169 - 269
Target Start/End: Complemental strand, 39204663 - 39204564
Alignment:
Q  169 tggcttcattttgtttcccccaacagttctatcatttgttaagagaaaattgacatcttggtgttaatgcgtggaaaatgaaatagacttcaaatttatc 268  Q
    |||||||||||||||||||| ||||| |||  ||||||||| ||||||||||||||||| || ||||||| | || |||||||||||||| |||||||||    
T  39204663 tggcttcattttgtttcccc-aacagatctcacatttgttacgagaaaattgacatcttcgttttaatgctttgagaatgaaatagacttgaaatttatc 39204565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 202 - 274
Target Start/End: Original strand, 39224534 - 39224606
Alignment:
Q  202 atttgttaagagaaaattgacatcttggtgttaatgcgtggaaaatgaaatagacttcaaatttatctctctt 274  Q
    |||||||||||||||||||||| |||||| ||||||| | |||||||||| ||| || |||||||||||||||    
T  39224534 atttgttaagagaaaattgacagcttggttttaatgctttgaaaatgaaacagaattgaaatttatctctctt 39224606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 306
Target Start/End: Complemental strand, 39379812 - 39379675
Alignment:
Q  169 tggcttcattttgtttcccccaacagttctatcatttgttaagagaaaattgacatcttggtgttaatgcgtggaaaatgaaatagacttcaaatttatc 268  Q
    |||||| ||||||||||||||| |||||||  | |||||| ||||| ||||||| ||||||||||||| | ||||| |||| ||| |||||| |||||||    
T  39379812 tggcttaattttgtttccccca-cagttctcacctttgtttagagagaattgacgtcttggtgttaat-cttggaatatgagataaacttcatatttatc 39379715  T
Q  269 tctc--ttcatgtatctcttccatgttataaatggtttga 306  Q
    ||||  || |||||||| ||| || || ||||||||||||    
T  39379714 tctctatttatgtatcttttctattttctaaatggtttga 39379675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 209 - 331
Target Start/End: Original strand, 39156676 - 39156800
Alignment:
Q  209 aagagaaaattgacatcttggtgttaatgcgtggaaaatgaaatagacttcaaatttatctctc---ttcatgtatctcttccatgttataaatggtttg 305  Q
    |||| |||||||||| |||||||||||||| |||||||||||||||| || ||| | |||||||   || |||| |||||||||| || |||||||| ||    
T  39156676 aagacaaaattgacaacttggtgttaatgcttggaaaatgaaatagaattgaaactgatctctcttttttatgtgtctcttccattttctaaatggtatg 39156775  T
Q  306 atggattttgaattattcagtccaat 331  Q
    | | | |||||| |||||||||||||    
T  39156776 acgaagtttgaa-tattcagtccaat 39156800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 345
Target Start/End: Complemental strand, 39386615 - 39386437
Alignment:
Q  169 tggcttcattttgtttcccccaacagttctatcatttgttaagagaaaattgacatcttggtgttaatgcgtggaaaatgaaatagacttc-aaatttat 267  Q
    |||||| ||||||||||||| ||||| |||  | |||||||| ||| |||  |||||||| | | ||||| | ||||||||| |||||||| ||||||||    
T  39386615 tggcttgattttgtttcccc-aacagatctcgcgtttgttaatagataatcaacatcttgctttcaatgctttgaaaatgaattagacttcgaaatttat 39386517  T
Q  268 ctctc--ttcatgtatctcttccatgttataaatggtttgatggattttgaattattcagtccaatttccttggtttttt 345  Q
    |||||  || |||||||||||| |  || ||||||||||||   |||||||| |||||||| |||| | ||| |||||||    
T  39386516 ctctccttttatgtatctcttctagtttctaaatggtttgacaaattttgaaatattcagttcaatctgcttagtttttt 39386437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 276 - 349
Target Start/End: Original strand, 39455096 - 39455170
Alignment:
Q  276 atgtatctcttccatgttataaatggtttgatggattttgaattattcagtccaa-tttccttggttttttgtga 349  Q
    |||||||||||| || || | ||| |||||||||||||||| ||||||||||||| ||||||| |||||||||||    
T  39455096 atgtatctcttctattttcttaatagtttgatggattttgagttattcagtccaattttccttagttttttgtga 39455170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 226 - 331
Target Start/End: Original strand, 39372018 - 39372125
Alignment:
Q  226 ttggtgttaatgcgtggaaaatgaaatagacttcaaatttatctctc--ttcatgtatctcttccatgttataaatggtttgatggattttgaattattc 323  Q
    ||||| ||||||| |||||| ||||  |||||| |||||||||||||  || |||||||||||| || |||||||||||||||    ||||||| |||||    
T  39372018 ttggttttaatgcttggaaagtgaagcagacttgaaatttatctctccttttatgtatctcttctattttataaatggtttgaatttttttgaaatattc 39372117  T
Q  324 agtccaat 331  Q
    ||| ||||    
T  39372118 agtacaat 39372125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 265
Target Start/End: Original strand, 39126050 - 39126113
Alignment:
Q  200 tcatttgttaagagaaaattgacatcttggtgttaatgcgtggaaaatgaaatagacttcaaattt 265  Q
    |||||||||||||||||||||| ||||||  |  ||||| |||||||||||||| |||||||||||    
T  39126050 tcatttgttaagagaaaattgaaatcttg--gccaatgcttggaaaatgaaataaacttcaaattt 39126113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 62 - 111
Target Start/End: Complemental strand, 44749410 - 44749361
Alignment:
Q  62 tcaaatacttttagatgataagtaaaaactgtgcaggatatatacaaaga 111  Q
    ||||||| ||||||||||||||||| |||| ||||||| |||||||||||    
T  44749410 tcaaatatttttagatgataagtaagaactatgcaggaaatatacaaaga 44749361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 180 - 227
Target Start/End: Original strand, 39217214 - 39217261
Alignment:
Q  180 tgtttcccccaacagttctatcatttgttaagagaaaattgacatctt 227  Q
    |||||||| ||| |||| | ||||||||||||||||||||||||||||    
T  39217214 tgtttccctcaatagttatctcatttgttaagagaaaattgacatctt 39217261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 64 - 99
Target Start/End: Original strand, 39451991 - 39452026
Alignment:
Q  64 aaatacttttagatgataagtaaaaactgtgcagga 99  Q
    |||||||||||||||||||||||||||| |||||||    
T  39451991 aaatacttttagatgataagtaaaaactatgcagga 39452026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 264
Target Start/End: Complemental strand, 39503737 - 39503675
Alignment:
Q  200 tcatttgttaagagaaaattgacatcttggtgttaatgcgtggaaaatgaaatagacttcaaatt 264  Q
    ||||||||||||||||| |||  |||||||   |||||| ||||||||||||||||||| |||||    
T  39503737 tcatttgttaagagaaatttggtatcttggc--taatgcttggaaaatgaaatagactttaaatt 39503675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 215
Target Start/End: Complemental strand, 44749360 - 44749316
Alignment:
Q  171 gcttcattttgtttcccccaacagttctatcatttgttaagagaa 215  Q
    |||||||||||||||||| ||||||| | ||| ||||||||||||    
T  44749360 gcttcattttgtttccccaaacagttttgtcaattgttaagagaa 44749316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 199; Significance: 1e-108; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 36 - 278
Target Start/End: Original strand, 19809897 - 19810139
Alignment:
Q  36 acaactcatgttgaaattttataaattcaaatacttttagatgataagtaaaaactgtgcaggatatatacaaagatactcagattgatatattagatgt 135  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  19809897 acaactcatgttcaaattttataaattcaaatacttttagatgataagtaaaaactttgcaggatatatacaaagatactcagattgatatattaaatgt 19809996  T
Q  136 tggtaacttggtacgaaatggaactcatttagctggcttcattttgtttcccccaacagttctatcatttgttaagagaaaattgacatcttggtgttaa 235  Q
    |||||||||||||||||||||||||| | ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | |||||||    
T  19809997 tggtaacttggtacgaaatggaactcgtgtagttggcttcattttgtttcccctaacagttctatcatttgttaagagaaaattgacatcatagtgttaa 19810096  T
Q  236 tgcgtggaaaatgaaatagacttcaaatttatctctcttcatg 278  Q
    ||| |||||||| ||||||||||||||||||||||||||||||    
T  19810097 tgcttggaaaatcaaatagacttcaaatttatctctcttcatg 19810139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 345
Target Start/End: Original strand, 19810141 - 19810179
Alignment:
Q  307 tggattttgaattattcagtccaatttccttggtttttt 345  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  19810141 tggattttgaattattcagtccaattttcttggtttttt 19810179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 171 - 324
Target Start/End: Original strand, 17060996 - 17061151
Alignment:
Q  171 gcttcattttgtttcccccaacagttctatcattt-gttaagagaaaattgacatcttggtgttaatgcgtggaaaatgaaatagacttcaaatttatct 269  Q
    |||| ||||||||||||| ||||||| | |||||| ||| | |||||||||||||||||||||||||   ||||||||||||||||||  ||||||||||    
T  17060996 gctttattttgtttcccctaacagttttgtcattttgttgaaagaaaattgacatcttggtgttaatttttggaaaatgaaatagactcaaaatttatct 17061095  T
Q  270 ct-cttcatgtatctcttccatgttataaatggtttgatggattttgaattattca 324  Q
     |  ||  |||||| ||||||| | ||||||||||||| | ||||| |||||||||    
T  17061096 atattttttgtatcacttccatttcataaatggtttgacgaattttaaattattca 17061151  T

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Target: chr5; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 169 - 306
Target Start/End: Original strand, 33563145 - 33563289
Alignment:
Q  169 tggcttcattttgtttcccccaacagttctatcatttgttaagagaaaattgacatcttggtgttaa------tgcgtggaaaatgaaatagacttcaaa 262  Q
    ||||||||||||||||| || ||||| |||  |||||||||||||||||||||||||||| | ||||      ||| | ||||||||||||||||| |||    
T  33563145 tggcttcattttgtttcacc-aacagatctcacatttgttaagagaaaattgacatcttgattttaaacttaatgctttgaaaatgaaatagacttgaaa 33563243  T
Q  263 tttatctctc--ttcatgtatctcttccatgttataaatggtttga 306  Q
    ||||||||||  || |||||||||||| || || ||||||||||||    
T  33563244 tttatctctcattttatgtatctcttctattttctaaatggtttga 33563289  T

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Target: chr8 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 200 - 258
Target Start/End: Original strand, 45343524 - 45343583
Alignment:
Q  200 tcatttgttaagagaaaattgacatctt-ggtgttaatgcgtggaaaatgaaatagactt 258  Q
    ||||||||||| |||||||||||||||| || |||||||  |||||||||||||||||||    
T  45343524 tcatttgttaatagaaaattgacatcttgggcgttaatgtttggaaaatgaaatagactt 45343583  T

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Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 115
Target Start/End: Original strand, 45343382 - 45343437
Alignment:
Q  62 tcaaatacttttagatgataagt--aaaaactgtgcaggatatatacaaagatact 115  Q
    |||||||||||||||||||| ||  ||||||  |||||||||||||||||||||||    
T  45343382 tcaaatacttttagatgatacgtaaaaaaacaatgcaggatatatacaaagatact 45343437  T

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Target: chr6 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 244
Target Start/End: Original strand, 16115125 - 16115170
Alignment:
Q  199 atcatttgttaagagaaaattgacatcttggtgttaatgcgtggaa 244  Q
    ||||||||||  ||||||||||| |||||||||||||||| |||||    
T  16115125 atcatttgttttgagaaaattgatatcttggtgttaatgcttggaa 16115170  T

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