View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17439_high_16 (Length: 264)
Name: NF17439_high_16
Description: NF17439
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17439_high_16 |
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Alignment Details
Target: chr3 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 7 - 249
Target Start/End: Original strand, 10777852 - 10778094
Alignment:
| Q |
7 |
agagatgaataatcaaagaagaaacaatcaaaagaggaatcaacataccaaaccaatctaaacgaaccaaaactcataaattaagaggcaacttatgcaa |
106 |
Q |
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| T |
10777852 |
agagaagaataatcaaagaagaaacaatcaaaagaggaatcaacataccaaaccaatctaaacgaaccaaaactcataaattaagaggtaacttatgcaa |
10777951 |
T |
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| Q |
107 |
aaccaagaccaaataattacaaagaaaaacaccttagtannnnnnnaatgttaataaagtgaccaataattacaaaccaatgctatattcaaatatgtcg |
206 |
Q |
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| T |
10777952 |
aaccaagaccaaataattacaaagaaaaacaccttagtatttttttaatgttaataaagtgaccaataattacaaaccaatgctatattcaaatatgtcg |
10778051 |
T |
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| Q |
207 |
accaaacaatggacaaaaatccaattaaatcaaccaagttcgt |
249 |
Q |
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| T |
10778052 |
accaaacaatggacaaaaatccaattaaatcaaccaagttcgt |
10778094 |
T |
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