View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1743_low_10 (Length: 284)
Name: NF1743_low_10
Description: NF1743
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1743_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 18 - 275
Target Start/End: Original strand, 36020846 - 36021103
Alignment:
| Q |
18 |
ttaattttatcaaaatatagttatttgataatctttgtagagcttattcaaccatgcaaatttatattgtattattctgattgtgtatgatcctgtgttt |
117 |
Q |
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| T |
36020846 |
ttaattttatcaaaatatagttatttgataatcttggtagagcttattcaaccatgcaaatttatattgtattattctgattgtgtatgatcctgtgttt |
36020945 |
T |
|
| Q |
118 |
ttatattgctaatgctaccctatttatgagtcccaccttaaatgagataaggtctgaacatgggtctatgcaatcctcaccttataagccggtcttttag |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
36020946 |
ttatattgctaatgctaccctatttatgagtcccaccttaaatgagataaggtctgaacatgggtctatgcaatcctcaccttataagccggtcttgtag |
36021045 |
T |
|
| Q |
218 |
gtttatttaatttaattaggaccaattcaaaattataatatggtatcacagcctatgc |
275 |
Q |
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||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
36021046 |
gtttatttaatttaatttggaccaattcaaaattataatatggtatcacagcctatgc |
36021103 |
T |
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