View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17441_high_15 (Length: 430)
Name: NF17441_high_15
Description: NF17441
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17441_high_15 |
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Alignment Details
Target: chr7 (Bit Score: 398; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 398; E-Value: 0
Query Start/End: Original strand, 17 - 422
Target Start/End: Complemental strand, 32968382 - 32967977
Alignment:
| Q |
17 |
attgatgttaggaaaattgcaagaggaactcaagtacttctttgatgggtataacatgtcttcatctacgtttgaaagctggtgctttaaagtgttggat |
116 |
Q |
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| T |
32968382 |
attgatgttaggaaaattgcaagaggaactcaagtacttctttgatgggtataacatgtcttcatctacgtttgaaagctggtgctttaaagtgttggat |
32968283 |
T |
|
| Q |
117 |
tgaggattcttctgagacatgtaattgttgcaagtgttgatttgggaagattgttgttggttaaaattttcagtgttgaaacctgaacttgttccaattc |
216 |
Q |
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| T |
32968282 |
tgaggattcttctgagacatgtaattgttgcaagtgttgatatgggaagattgttgttggttaaaattttcagtgttgaaacctgaacttgttccaattc |
32968183 |
T |
|
| Q |
217 |
ctgatgggttgttggaattttcagataagaagctgcttaacatggagtagtccatagcatctaataggtttgaaaaggacactgatttttgagacatgag |
316 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32968182 |
ctgatgggttgttggaattttcagataagaagctgcttaacatggagtagtccatagcatctaataggtttgaaaaggacactgatttttgagacatgag |
32968083 |
T |
|
| Q |
317 |
tgtgttttgaagaggtgaggttgtgtttttggtgattggaaatagggtttcttggaattgtgtctcttctgcatgttccacttcacctaccaaagtttct |
416 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
32968082 |
tgtgttttgaagaggtgaggttgtgtttttggtgattggaaatagggtttcttggaattgtgtctcttctgcatgttccacttcacctaccatagtttct |
32967983 |
T |
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| Q |
417 |
gatgat |
422 |
Q |
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|||||| |
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| T |
32967982 |
gatgat |
32967977 |
T |
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