View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17441_low_2 (Length: 700)
Name: NF17441_low_2
Description: NF17441
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17441_low_2 |
 | |
|
Alignment Details
Target: chr8 (Bit Score: 656; Significance: 0; HSPs: 6)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 656; E-Value: 0
Query Start/End: Original strand, 1 - 684
Target Start/End: Original strand, 8974026 - 8974709
Alignment:
| Q |
1 |
ggagtctcactctctggcttatctttttatctaggaaacttctctgctagtaatattccaattgttttcatgggtaagtgtgacaatattacacaactaa |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8974026 |
ggagtctcactctctggcttatctttttatctaggaaacttctctgctagtaatattccaattgttttcatgggtaagtgtgacaatattacacaactaa |
8974125 |
T |
|
| Q |
101 |
tcaaagtgaaaagtaagattgttgtctgtgaagacaagaatggaactcttcttgatcaagtttctaatttgcttacagtaatagttgtaggagctgttat |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8974126 |
tcaaagtgaaaagtaagattgttgtctgtgaagacaagaatggaactctttttgatcaagtttctaatttgcttacagtaatagttgtaggagctgttat |
8974225 |
T |
|
| Q |
201 |
tatatcaaacacttcacaaaataatctatcacaacttttagggttccagcttccatatatcattattaaccaaaccaatggagaaattatcaaagattac |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8974226 |
tatatcaaacacttcacaaaataatctatcacaacttttagggttccagcttccatacatcattattaaccaaaccaatggagaaattatcaaagattac |
8974325 |
T |
|
| Q |
301 |
atccaaagtagctctaactccagttcaatagaaaaaatttctttcaagataacatcttttggtgctaaaccagctcctagcgtggatttttatagttcaa |
400 |
Q |
| |
|
|| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8974326 |
atacaaagtaactctaactccagttcaatagaaaaaatttctttcaagataacatcttttggtgctaaaccagctcctagcgtggatttttatagttcaa |
8974425 |
T |
|
| Q |
401 |
gaggtccttcagaaagttgcccaaatgttttgaaacctgacattacaggtcctggtacatcaatcttagctgcatggcctacaaatattcctgtgttgga |
500 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8974426 |
gaggtccttctgaaagttgcccaaatgttttgaaacctgacattacaggtcctggtacatcaatcttagctgcatggcctacaaatattcctgtgttgga |
8974525 |
T |
|
| Q |
501 |
gtttgggtcaagtaaagtcttcaacaagttcaattttttaagtggaacatctatgtcatctcctcatgttgctggtgtaggagcacttttgaaagctgca |
600 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8974526 |
gtttgggtcacgtaaagtcttcaacaagttcaattttttaagtggaacatctatgtcatctcctcatgttgctggtgtaggagcacttttgaaagctgca |
8974625 |
T |
|
| Q |
601 |
catgttgattggagccctgcagctattaggtcagcaatgatgacaacatcagacatatttgataatactaaggaacttataaaa |
684 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
8974626 |
catgttgattggagccctgcagctattaggtcagcaatgatgacaacatcagacatatttgataatactaaggaactcataaaa |
8974709 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 324; E-Value: 0
Query Start/End: Original strand, 1 - 680
Target Start/End: Original strand, 8962630 - 8963309
Alignment:
| Q |
1 |
ggagtctcactctctggcttatctttttatctaggaaacttctctgctagtaatattccaattgttttcatgggtaagtgtgacaatattacacaactaa |
100 |
Q |
| |
|
|||||||||||| | ||||| |||| ||| |||||||||||||||||||||||||||| |||||||||| |||| |||||||||| ||||| |||||| |
|
|
| T |
8962630 |
ggagtctcactcaccggcttctcttcctatataggaaacttctctgctagtaatattcccattgttttcaaaggtatgtgtgacaattttacagaactaa |
8962729 |
T |
|
| Q |
101 |
tcaaagtgaaaagtaagattgttgtctgtgaagacaagaatggaactcttcttgatcaagtttctaatttgcttacagtaatagttgtaggagctgttat |
200 |
Q |
| |
|
||| |||||| || ||||||| || |||||||||||||||| || |||| | ||||| ||| |||| || ||| || | ||||||||||||| || | |
|
|
| T |
8962730 |
tcagagtgaagagcgagattgtggtttgtgaagacaagaatgaaagtctttctaatcaaatttataatgtggttaaagcagaagttgtaggagctatttt |
8962829 |
T |
|
| Q |
201 |
tatatcaaacacttcacaaaataatctatcacaacttttagggttccagcttccatatatcattattaaccaaaccaatggagaaattatcaaagattac |
300 |
Q |
| |
|
|||||||||||| ||||| || |||||||| || ||| ||| || |||||||| |||||||||||||| | ||||||||||| ||||||||||| |
|
|
| T |
8962830 |
tatatcaaacacaacacaagatgatctatcagaagacttacggtacctgcttccatccatcattattaaccagaaaaatggagaaatggtcaaagattac |
8962929 |
T |
|
| Q |
301 |
atccaaagtagctctaactccagttcaatagaaaaaatttctttcaagataacatcttttggtgctaaaccagctcctagcgtggatttttatagttcaa |
400 |
Q |
| |
|
|| || |||| || |||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||| | |
|
|
| T |
8962930 |
atacatagtaactttaactctagttcaatagaaaaaatgtctttcaagattacatcttttggtgctaaaccagtacctagggtggatttttatagttcta |
8963029 |
T |
|
| Q |
401 |
gaggtccttcagaaagttgcccaaatgttttgaaacctgacattacaggtcctggtacatcaatcttagctgcatggcctacaaatattcctgtgttgga |
500 |
Q |
| |
|
|||| || ||| | ||||| ||| |||| ||||||||||||||||||| ||| ||||| ||||||||||||||||||||| ||||| ||||||||||||| |
|
|
| T |
8963030 |
gagggccatcaaagagttgtccatatgtgttgaaacctgacattacagctcccggtacgtcaatcttagctgcatggcctccaaatgttcctgtgttgga |
8963129 |
T |
|
| Q |
501 |
gtttgggtcaagtaaagtcttcaacaagttcaattttttaagtggaacatctatgtcatctcctcatgttgctggtgtaggagcacttttgaaagctgca |
600 |
Q |
| |
|
|||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||| |
|
|
| T |
8963130 |
ttttgggtctcataaagtcgtcaacaagttcaattttttaactggaacatctatgtcatgtcctcatgttgccggtgtaggagcacttttgaaaggagca |
8963229 |
T |
|
| Q |
601 |
catgttgattggagccctgcagctattaggtcagcaatgatgacaacatcagacatatttgataatactaaggaacttat |
680 |
Q |
| |
|
|||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
8963230 |
catgctgattggagcccgacagctattaggtcggcaatgatgacaacatcagacatatttgataacactaaggaacttat |
8963309 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 324 - 676
Target Start/End: Complemental strand, 8946128 - 8945779
Alignment:
| Q |
324 |
ttcaatagaaaaaatttctttcaagataacatcttttggtgctaaaccagctcctagcgtggatttttatagttcaagaggtccttcagaaagttgccca |
423 |
Q |
| |
|
|||||||| ||| || ||||||||| || || |||||| |||||||||| ||| | || | | || |||||| ||||| || ||| | ||||| ||| |
|
|
| T |
8946128 |
ttcaatagcaaatatgtctttcaagttatcaatttttggaactaaaccagcacctggtgtttactcttctagttcgagaggaccatcaaatagttgtcca |
8946029 |
T |
|
| Q |
424 |
aatgttttgaaacctgacattacaggtcctggtacatcaatcttagctgcatggcctacaaatattcctgtgttggagtttgggtcaagtaaagtcttca |
523 |
Q |
| |
|
|||| ||||||||||||||||| | ||||| |||||||||||||||||||||||| ||||| ||||||||||||| || | | ||||||||| |
|
|
| T |
8946028 |
tatgtcttgaaacctgacattacggctcctgatacatcaatcttagctgcatggcccacaaaacttcctgtgttggatcctgtgaccg---aagtcttca |
8945932 |
T |
|
| Q |
524 |
acaagttcaattttttaagtggaacatctatgtcatctcctcatgttgctggtgtaggagcacttttgaaagctgcacatgttgattggagccctgcagc |
623 |
Q |
| |
|
|||||||||| ||||||| ||||||||||| ||||| |||||||||||| ||||||||||||||||| |||| || | ||||||||||||||||||||| |
|
|
| T |
8945931 |
acaagttcaaatttttaactggaacatctacgtcatgtcctcatgttgccggtgtaggagcacttttaaaaggagcgcgtgttgattggagccctgcagc |
8945832 |
T |
|
| Q |
624 |
tattaggtcagcaatgatgacaacatcagacatatttgataatactaaggaac |
676 |
Q |
| |
|
||| ||||| ||||| |||||||||||| |||||| ||||||||||||||||| |
|
|
| T |
8945831 |
tataaggtcggcaattatgacaacatcaaacatatatgataatactaaggaac |
8945779 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 390 - 676
Target Start/End: Original strand, 8958005 - 8958291
Alignment:
| Q |
390 |
ttatagttcaagaggtccttcagaaagttgcccaaatgttttgaaacctgacattacaggtcctggtacatcaatcttagctgcatggcctacaaatatt |
489 |
Q |
| |
|
||||||||||||||| |||||| | ||||| ||| || |||||||||||||||| || | |||||||||| ||||||||||||||||| |||||| || |
|
|
| T |
8958005 |
ttatagttcaagagggccttcaaatagttgtccatatattttgaaacctgacatcactgctcctggtacaaatatcttagctgcatggcccacaaatgtt |
8958104 |
T |
|
| Q |
490 |
cctgtgttggagtttgggtcaagtaaagtcttcaacaagttcaattttttaagtggaacatctatgtcatctcctcatgttgctggtgtaggagcacttt |
589 |
Q |
| |
|
|||||| ||| || ||| | ||| ||||||||||||||||| | ||||||||||||||||| ||| |||||||||||| ||||| | ||||||| |
|
|
| T |
8958105 |
cctgtgatgggtttggggactcataagatcttcaacaagttcaatgtgataagtggaacatctatggcatgtcctcatgttgcaggtgtcgcggcacttt |
8958204 |
T |
|
| Q |
590 |
tgaaagctgcacatgttgattggagccctgcagctattaggtcagcaatgatgacaacatcagacatatttgataatactaaggaac |
676 |
Q |
| |
|
|||||| ||||| | ||||||||||||||| || ||| |||| ||||| |||||||| || |||||| |||||||||||||||||| |
|
|
| T |
8958205 |
tgaaaggagcacacggtgattggagccctgccgcgattcggtcggcaattatgacaacgtcggacataattgataatactaaggaac |
8958291 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 562 - 676
Target Start/End: Complemental strand, 9948363 - 9948250
Alignment:
| Q |
562 |
cctcatgttgctggtgtaggagcacttttgaaagctgcacatgttgattggagccctgcagctattaggtcagcaatgatgacaacatcagacatatttg |
661 |
Q |
| |
|
||||||||||||||||| |||||||||||||||| ||||||| |||||||| |||||||||||| ||||||||||| |||||||||||| |||||||| |
|
|
| T |
9948363 |
cctcatgttgctggtgttggagcacttttgaaaggagcacatgctgattgga-ccctgcagctataaggtcagcaattatgacaacatcaaccatatttg |
9948265 |
T |
|
| Q |
662 |
ataatactaaggaac |
676 |
Q |
| |
|
||||| ||||||||| |
|
|
| T |
9948264 |
ataatgctaaggaac |
9948250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 27 - 110
Target Start/End: Complemental strand, 8946434 - 8946351
Alignment:
| Q |
27 |
ttatctaggaaacttctctgctagtaatattccaattgttttcatgggtaagtgtgacaatattacacaactaatcaaagtgaa |
110 |
Q |
| |
|
|||||||||||| ||||||||||| ||| | |||||||||||||||||| ||| |||||| ||||| || ||||||||||||| |
|
|
| T |
8946434 |
ttatctaggaaatttctctgctagcaatttgccaattgttttcatgggtttgtgcgacaatgttacagaattaatcaaagtgaa |
8946351 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 115; Significance: 5e-58; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 312 - 676
Target Start/End: Complemental strand, 21687303 - 21686942
Alignment:
| Q |
312 |
ctctaactccagttcaatagaaaaaatttctttcaagataacatcttttggtgctaaaccagctcctagcgtggatttttatagttcaagaggtccttca |
411 |
Q |
| |
|
||||||| | |||||||||| ||| || |||||||||| |||| |||| |||| |||| || | ||||| |||||||||||||| ||||| || || ||| |
|
|
| T |
21687303 |
ctctaacgctagttcaatagcaaacatgtctttcaagaaaacagctttcggtgttaaatcaacacctagtgtggatttttatagctcaaggggaccatca |
21687204 |
T |
|
| Q |
412 |
gaaagttgcccaaatgttttgaaacctgacattacaggtcctggtacatcaatcttagctgcatggcctacaaatattcctgtgttggagtttgggtcaa |
511 |
Q |
| |
|
| ||||| ||| |||| |||||||||||||| || | |||||||||||||||||||||||||||||| ||||| ||||||||| | |||||| | |
|
|
| T |
21687203 |
aatagttgtccatatgtgttgaaacctgacatcactgctcctggtacatcaatcttagctgcatggcccacaaacgttcctgtgtccaattttggg---a |
21687107 |
T |
|
| Q |
512 |
gtaaagtcttcaacaagttcaattttttaagtggaacatctatgtcatctcctcatgttgctggtgtaggagcacttttgaaagctgcacatgttgattg |
611 |
Q |
| |
|
| ||||||| ||||| |||||||| || ||||||||||||||||| ||| |||||||| ||||||| ||| ||||| |||| ||||| || ||| |
|
|
| T |
21687106 |
ctgaagtctttaacaacttcaatttgatagatggaacatctatgtcatgtccacatgttgcaggtgtagcagcgcttttaaaaggggcacacaatggttg |
21687007 |
T |
|
| Q |
612 |
gagccctgcagctattaggtcagcaatgatgacaacatcagacatatttgataatactaaggaac |
676 |
Q |
| |
|
|||||| || |||||||||| ||||| |||||||||||||||||||| || ||||||||||||| |
|
|
| T |
21687006 |
gagcccgtcatctattaggtcggcaattatgacaacatcagacatattagacaatactaaggaac |
21686942 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 21687608 - 21687400
Alignment:
| Q |
1 |
ggagtctcactctctggcttatctttttatctaggaaacttctctgctagtaatattccaattgttttcatgggtaagtgtgacaatattacacaactaa |
100 |
Q |
| |
|
|||||||||||| |||| || ||||| |||||||||||||||||||||| ||| ||||||||||||| ||||||| |||||||||| ||| | || ||| |
|
|
| T |
21687608 |
ggagtctcactcactggtttgtctttctatctaggaaacttctctgctaacaattttccaattgtttttatgggtatgtgtgacaatgttaaagaattaa |
21687509 |
T |
|
| Q |
101 |
tcaaagtgaaaagtaagattgttgtctgtgaagacaagaatggaactcttcttgatcaagtttctaatttgcttacagtaatagttgtaggagctgttat |
200 |
Q |
| |
|
|| |||||| || |||||||| || ||||||| ||| |||| |||||||| ||| ||| | | |||| || || || || |||||| |||| |||| | |
|
|
| T |
21687508 |
acacagtgaagagaaagattgtggtttgtgaaggcaataatgaaactcttcatgaacaaatgtttaatgtgtataaagcaaaagttgttggaggtgtttt |
21687409 |
T |
|
| Q |
201 |
tatatcaaa |
209 |
Q |
| |
|
||||||||| |
|
|
| T |
21687408 |
tatatcaaa |
21687400 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 111; Significance: 1e-55; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 340 - 670
Target Start/End: Complemental strand, 19375989 - 19375659
Alignment:
| Q |
340 |
tctttcaagataacatcttttggtgctaaaccagctcctagcgtggatttttatagttcaagaggtccttcagaaagttgcccaaatgttttgaaacctg |
439 |
Q |
| |
|
|||||||||| |||| |||||||| ||||||| | ||||| || ||| |||||||||||||||| |||||| | | ||| ||| ||| |||||||| | |
|
|
| T |
19375989 |
tctttcaagaaaacaatttttggtgttaaaccaacacctagtgttgatctttatagttcaagagggccttcaaataattgtccatttgtgttgaaacccg |
19375890 |
T |
|
| Q |
440 |
acattacaggtcctggtacatcaatcttagctgcatggcctacaaatattcctgtgttggagtttgggtcaagtaaagtcttcaacaagttcaatttttt |
539 |
Q |
| |
|
|||| || | || ||||||||||||||||||||||||||| |||||| ||| ||||||||| || ||| | |||||||||||||||||||||||| | |
|
|
| T |
19375889 |
acatcactgctcttggtacatcaatcttagctgcatggccaacaaatgttcatgtgttggatttggggacttttaaagtcttcaacaagttcaatttgat |
19375790 |
T |
|
| Q |
540 |
aagtggaacatctatgtcatctcctcatgttgctggtgtaggagcacttttgaaagctgcacatgttgattggagccctgcagctattaggtcagcaatg |
639 |
Q |
| |
|
|||||||||||||||| ||| |||||| ||||| ||| ||| | ||||||||||| ||||||||||||||||| || |||| ||| | || || || |
|
|
| T |
19375789 |
aagtggaacatctatggcatgtcctcacgttgcaggtatagcattacttttgaaaggagcacatgttgattggagtccgacagcaattcgttctgcgatt |
19375690 |
T |
|
| Q |
640 |
atgacaacatcagacatatttgataatacta |
670 |
Q |
| |
|
|||||||||||||||||| | || ||||||| |
|
|
| T |
19375689 |
atgacaacatcagacataatagacaatacta |
19375659 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 102; Significance: 3e-50; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 277 - 676
Target Start/End: Complemental strand, 34962955 - 34962559
Alignment:
| Q |
277 |
aatggagaaattatcaaagattacatccaaagtagctctaactccagttcaatagaaaaaatttctttcaagataacatcttttggtgctaaaccagctc |
376 |
Q |
| |
|
||||| |||||| |||||| ||||||| | ||||| |||||| | |||||| | || || ||||||| || |||| |||||| |||||||||| | |
|
|
| T |
34962955 |
aatggtgaaattgtcaaagcttacatcaagagtag---taactctacttcaattgcaagcatgtctttcatgaaaacagtttttggaactaaaccagcac |
34962859 |
T |
|
| Q |
377 |
ctagcgtggatttttatagttcaagaggtccttcagaaagttgcccaaatgttttgaaacctgacattacaggtcctggtacatcaatcttagctgcatg |
476 |
Q |
| |
|
|||| || |||| |||||||||||||| || ||| | ||||| ||| ||| ||||||||||||||||| | |||||||| || |||||||| ||||| |
|
|
| T |
34962858 |
ctagtgttgattcatatagttcaagagggccatcatatagttgtccatttgtgttgaaacctgacattactgcgcctggtacttcgatcttagcggcatg |
34962759 |
T |
|
| Q |
477 |
gcctacaaatattcctgtgttggagtttgggtcaagtaaagtcttcaacaagttcaattttttaagtggaacatctatgtcatctcctcatgttgctggt |
576 |
Q |
| |
|
|||||||||| |||||||| |||| |||| ||| |||| | |||| ||| |||||||| ||||||||||||||||| | | ||||||||||| ||| |
|
|
| T |
34962758 |
gcctacaaatgttcctgtgatggaatttgagtctcataaaattttcagcaaattcaatttgataagtggaacatctatggcgtgccctcatgttgcaggt |
34962659 |
T |
|
| Q |
577 |
gtaggagcacttttgaaagctgcacatgttgattggagccctgcagctattaggtcagcaatgatgacaacatcagacatatttgataatactaaggaac |
676 |
Q |
| |
|
|| | || |||||||||| | ||| |||||||||||| ||||| ||| |||| ||||| ||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
34962658 |
gtcgcggcgcttttgaaaggagtgcatagtgattggagcccagcagcaattcggtcggcaataatgacaacatcagacatatttgataattctaaggaac |
34962559 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 103 - 147
Target Start/End: Complemental strand, 34963123 - 34963079
Alignment:
| Q |
103 |
aaagtgaaaagtaagattgttgtctgtgaagacaagaatggaact |
147 |
Q |
| |
|
||||||||||| |||||| | || ||||||||||||||||||||| |
|
|
| T |
34963123 |
aaagtgaaaagcaagattatagtgtgtgaagacaagaatggaact |
34963079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 518 - 656
Target Start/End: Original strand, 49008292 - 49008430
Alignment:
| Q |
518 |
tcttcaacaagttcaattttttaagtggaacatctatgtcatctcctcatgttgctggtgtaggagcacttttgaaag--ctgcacatgttgattggagc |
615 |
Q |
| |
|
|||||||||| ||||| || |||||||||||||| ||||||| ||| || ||||| ||||||| ||||||||| |||| ||||| ||| ||||||| |
|
|
| T |
49008292 |
tcttcaacaacttcaacttgttaagtggaacatcaatgtcatgtccacacgttgcaggtgtagcagcacttttaaaagaaatgcac-ccttg-ttggagc |
49008389 |
T |
|
| Q |
616 |
cctgcagctattaggtcagcaatgatgacaacatcagacat |
656 |
Q |
| |
|
|| ||||| ||||| || || |||||||||||||||||||| |
|
|
| T |
49008390 |
ccagcagccattagatcggctatgatgacaacatcagacat |
49008430 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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