View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17442_high_22 (Length: 274)
Name: NF17442_high_22
Description: NF17442
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17442_high_22 |
 |  |
|
Alignment Details
Target: chr3 (Bit Score: 155; Significance: 2e-82; HSPs: 6)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 33251713 - 33251978
Alignment:
| Q |
1 |
ctacgcatgagccggattagtcgtccac-tttgatggatcgaaaacgagtgcgaaagccnnnnnnnnnn---------gaaatcaatgatttacttcnnn |
90 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
33251713 |
ctacgcatgagccggattagtcgtccacatttgatgggtcgaaaacgagtgcgaaagccaaaaaaaaaaaaaaaaaaagaaatcaatgatttacttcttt |
33251812 |
T |
 |
| Q |
91 |
nnnnatttgtttcctttttatgtggaaatattatgatatcattgaatggaaaagataatcaactaacgagtaaaatcatttctctaagatatccgttctt |
190 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
33251813 |
ttt-atttgcttcctttttatgtggaaatattatgatatcattgaatggaaaagataatcaactaacgagtaaaatcatttctctaagatatcctttctt |
33251911 |
T |
 |
| Q |
191 |
tccactacttcctttatttacaagccctcacttcccgtccactcaaatggagccttagtgtattata |
257 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
33251912 |
tccactacttcctttatttacaagccctcacttcccgtccactcaaatggagccttaatgtattata |
33251978 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 47219195 - 47219253
Alignment:
| Q |
1 |
ctacgcatgagccggattagtcgtcca-ctttgatggatcgaaaacgagtgcgaaagcc |
58 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||| ||| |||| ||||||||||| |
|
|
| T |
47219195 |
ctacgcatgagccggattagtcgtccacctttgatgggtcggaaaccggtgcgaaagcc |
47219253 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 53649778 - 53649833
Alignment:
| Q |
1 |
ctacgcatgagccggattagtcgtcca-ctttgatggatcgaaaacgagtgcgaaa |
55 |
Q |
| |
|
|||||||||||||||||||||||| || ||||||||||||| |||| |||||||| |
|
|
| T |
53649778 |
ctacgcatgagccggattagtcgttcacctttgatggatcggaaaccggtgcgaaa |
53649833 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 23511618 - 23511675
Alignment:
| Q |
1 |
ctacgcatgagccggattagtcgtcca-ctttgatggatcgaaaacgagtgcgaaagc |
57 |
Q |
| |
|
||||||||||| ||||||| ||||||| ||||||||| |||||||| |||||||||| |
|
|
| T |
23511618 |
ctacgcatgagtcggattaatcgtccacctttgatgggtcgaaaaccggtgcgaaagc |
23511675 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 7328895 - 7328951
Alignment:
| Q |
2 |
tacgcatgagccggattagtcgtcca-ctttgatggatcgaaaacgagtgcgaaagc |
57 |
Q |
| |
|
|||||||||||||||||||||| ||| ||||| ||| |||||||| |||||||||| |
|
|
| T |
7328895 |
tacgcatgagccggattagtcgcccacctttggtgggtcgaaaaccggtgcgaaagc |
7328951 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 22909834 - 22909890
Alignment:
| Q |
1 |
ctacgcatgagccggattagtcgtcca-ctttgatggatcgaaaacgagtgcgaaag |
56 |
Q |
| |
|
|||||||||||||| ||||||||| || ||||||||| ||| |||| |||||||||| |
|
|
| T |
22909834 |
ctacgcatgagccgaattagtcgtgcacctttgatgggtcggaaaccagtgcgaaag |
22909890 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 21375403 - 21375461
Alignment:
| Q |
1 |
ctacgcatgagccggattagtcgtcca-ctttgatggatcgaaaacgagtgcgaaagcc |
58 |
Q |
| |
|
||||||||||| ||||||||||||||| ||||||||||||| |||| |||||||||||| |
|
|
| T |
21375403 |
ctacgcatgagtcggattagtcgtccatctttgatggatcggaaaccagtgcgaaagcc |
21375461 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 42291560 - 42291505
Alignment:
| Q |
1 |
ctacgcatgagccggattagtcgtcca-ctttgatggatcgaaaacgagtgcgaaa |
55 |
Q |
| |
|
||||||| ||||||||||||||||||| ||||||||||||| |||| |||||||| |
|
|
| T |
42291560 |
ctacgcacgagccggattagtcgtccacctttgatggatcggaaaccggtgcgaaa |
42291505 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 9805056 - 9805114
Alignment:
| Q |
1 |
ctacgcatgagccggattagtcgtcca-ctttgatggatcgaaaacgagtgcgaaagcc |
58 |
Q |
| |
|
||||||||||||||||||||||||||| ||||| ||| ||| |||| ||||||||||| |
|
|
| T |
9805056 |
ctacgcatgagccggattagtcgtccacctttggtgggtcggaaacaggtgcgaaagcc |
9805114 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 42086379 - 42086437
Alignment:
| Q |
1 |
ctacgcatgagccggattagtcgtcca-ctttgatggatcgaaaacgagtgcgaaagcc |
58 |
Q |
| |
|
||||||||||||||||||||||||||| ||||| ||| ||| |||| ||||||||||| |
|
|
| T |
42086379 |
ctacgcatgagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagcc |
42086437 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 40117467 - 40117524
Alignment:
| Q |
1 |
ctacgcatgagccggattagtcgtcca-ctttgatggatcgaaaacgagtgcgaaagc |
57 |
Q |
| |
|
||||||||||||||||||| |||| || ||||| |||||||||||| |||||||||| |
|
|
| T |
40117467 |
ctacgcatgagccggattaatcgttcacctttggtggatcgaaaaccggtgcgaaagc |
40117524 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 35; Significance: 0.0000000001; HSPs: 6)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 48551911 - 48551969
Alignment:
| Q |
1 |
ctacgcatgagccggattagtcgtcca-ctttgatggatcgaaaacgagtgcgaaagcc |
58 |
Q |
| |
|
||||| ||||||||||||||||||||| ||||||||||||| |||| ||||||||||| |
|
|
| T |
48551911 |
ctacgtatgagccggattagtcgtccacctttgatggatcggaaaccggtgcgaaagcc |
48551969 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 39474994 - 39475051
Alignment:
| Q |
1 |
ctacgcatgagccggattagtcgtcca-ctttgatggatcgaaaacgagtgcgaaagc |
57 |
Q |
| |
|
||||||||||||||||||||||||||| |||| ||| |||||||| ||||||||||| |
|
|
| T |
39474994 |
ctacgcatgagccggattagtcgtccacctttagtgggtcgaaaaccagtgcgaaagc |
39475051 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 1797514 - 1797572
Alignment:
| Q |
1 |
ctacgcatgagccggattagtcgtcca-ctttgatggatcgaaaacgagtgcgaaagcc |
58 |
Q |
| |
|
||||||| |||||||| |||||||||| |||||||||||||||||| |||| |||||| |
|
|
| T |
1797514 |
ctacgcacgagccggactagtcgtccatctttgatggatcgaaaaccggtgcaaaagcc |
1797572 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 43862027 - 43861969
Alignment:
| Q |
1 |
ctacgcatgagccggattagtcgtcca-ctttgatggatcgaaaacgagtgcgaaagcc |
58 |
Q |
| |
|
|||||||||||||||||||||| | || ||||| |||||||||||| ||||||||||| |
|
|
| T |
43862027 |
ctacgcatgagccggattagtcattcacctttggtggatcgaaaaccggtgcgaaagcc |
43861969 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 48244411 - 48244353
Alignment:
| Q |
1 |
ctacgcatgagccggattagtcg-tccactttgatggatcgaaaacgagtgcgaaagcc |
58 |
Q |
| |
|
||||||||||||||||||||||| || ||||| |||||||||||| ||||||||||| |
|
|
| T |
48244411 |
ctacgcatgagccggattagtcgctcacctttggtggatcgaaaaccggtgcgaaagcc |
48244353 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 3353478 - 3353534
Alignment:
| Q |
1 |
ctacgcatgagccggattagtcgtcca-ctttgatggatcgaaaacgagtgcgaaag |
56 |
Q |
| |
|
||||||| ||||||||||||||||||| |||||||||||| |||| ||||||||| |
|
|
| T |
3353478 |
ctacgcacgagccggattagtcgtccacctttgatggatcagaaaccggtgcgaaag |
3353534 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 35; Significance: 0.0000000001; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 8888937 - 8888994
Alignment:
| Q |
1 |
ctacgcatgagccggattagtcgtcca-ctttgatggatcgaaaacgagtgcgaaagcc |
58 |
Q |
| |
|
||||||||||| ||||||||||||||| |||||||||||||||||| | |||||||||| |
|
|
| T |
8888937 |
ctacgcatgagtcggattagtcgtccacctttgatggatcgaaaacca-tgcgaaagcc |
8888994 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 29444820 - 29444762
Alignment:
| Q |
1 |
ctacgcatgagccggattagtcgtcca-ctttgatggatcgaaaacgagtgcgaaagcc |
58 |
Q |
| |
|
||||||||||||||||||||| ||||| ||||| ||| ||| |||| |||||||||||| |
|
|
| T |
29444820 |
ctacgcatgagccggattagttgtccatctttggtgggtcggaaactagtgcgaaagcc |
29444762 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 34954674 - 34954617
Alignment:
| Q |
1 |
ctacgcatgagccggattagtcgtcca-ctttgatggatcgaaaacgagtgcgaaagc |
57 |
Q |
| |
|
||||||||||||| ||||||||||||| ||||||||| ||| |||| | ||||||||| |
|
|
| T |
34954674 |
ctacgcatgagccagattagtcgtccacctttgatgggtcggaaaccaatgcgaaagc |
34954617 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 8938766 - 8938822
Alignment:
| Q |
1 |
ctacgcatgagccggattagtcgtcca-ctttgatggatcgaaaacgagtgcgaaag |
56 |
Q |
| |
|
|||||||||||||| |||||||||||| ||||||||| ||| |||| ||||||||| |
|
|
| T |
8938766 |
ctacgcatgagccgaattagtcgtccacctttgatgggtcggaaaccggtgcgaaag |
8938822 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 17080099 - 17080156
Alignment:
| Q |
1 |
ctacgcatgagccggattagtcgtcca-ctttgatggatcgaaaacgagtgcgaaagc |
57 |
Q |
| |
|
||||||||||||||||||||||| || |||||||||||||||||| |||||||||| |
|
|
| T |
17080099 |
ctacgcatgagccggattagtcgcacacctttgatggatcgaaaaccggtgcgaaagc |
17080156 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 36145270 - 36145212
Alignment:
| Q |
1 |
ctacgcatgagccggattagtcgtcca-ctttgatggatcgaaaacgagtgcgaaagcc |
58 |
Q |
| |
|
|||| |||||||||||||||||||||| |||||||| |||| |||| ||||||||||| |
|
|
| T |
36145270 |
ctacacatgagccggattagtcgtccacctttgatgaatcggaaaccggtgcgaaagcc |
36145212 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 34; Significance: 0.0000000004; HSPs: 8)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 10336568 - 10336613
Alignment:
| Q |
1 |
ctacgcatgagccggattagtcgtcca-ctttgatggatcgaaaac |
45 |
Q |
| |
|
||||||||||||||||||| ||||||| |||||||||||||||||| |
|
|
| T |
10336568 |
ctacgcatgagccggattaatcgtccacctttgatggatcgaaaac |
10336613 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 33498895 - 33498855
Alignment:
| Q |
1 |
ctacgcatgagccggattagtcgtcca-ctttgatggatcg |
40 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
33498895 |
ctacgcatgagccggattagtcgtccacctttgatggatcg |
33498855 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 45
Target Start/End: Complemental strand, 46929789 - 46929749
Alignment:
| Q |
6 |
catgagccggattagtcgtccac-tttgatggatcgaaaac |
45 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
46929789 |
catgagccggattagtcgtccacttttgatggatcgaaaac |
46929749 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 30927783 - 30927753
Alignment:
| Q |
1 |
ctacgcatgagccggattagtcgtccacttt |
31 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
30927783 |
ctacgcatgagccggattagtcgtccacttt |
30927753 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 5504083 - 5504128
Alignment:
| Q |
1 |
ctacgcatgagccggattagtcgtcca-ctttgatggatcgaaaac |
45 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||| ||| |||| |
|
|
| T |
5504083 |
ctacgcatgagccggattagtcgtccacctttgatgggtcggaaac |
5504128 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 38791666 - 38791621
Alignment:
| Q |
1 |
ctacgcatgagccggattagtcgtcca-ctttgatggatcgaaaac |
45 |
Q |
| |
|
|||||||||||||| |||||||||||| |||||||||||| ||||| |
|
|
| T |
38791666 |
ctacgcatgagccgaattagtcgtccatctttgatggatcaaaaac |
38791621 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 45
Target Start/End: Complemental strand, 14254323 - 14254279
Alignment:
| Q |
2 |
tacgcatgagccggattagtcgtcca-ctttgatggatcgaaaac |
45 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||| ||| |||| |
|
|
| T |
14254323 |
tacgcatgagccggattagtcgtccacctttgatgggtcggaaac |
14254279 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 16263597 - 16263653
Alignment:
| Q |
1 |
ctacgcatgagccggattagtcgtccac-tttgatggatcgaaaacgagtgcgaaag |
56 |
Q |
| |
|
|||||||| ||||||| ||||||||||| |||||||||||| |||| ||||||||| |
|
|
| T |
16263597 |
ctacgcataagccggaatagtcgtccacttttgatggatcggaaaccggtgcgaaag |
16263653 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 31; Significance: 0.00000002; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 20116667 - 20116609
Alignment:
| Q |
1 |
ctacgcatgagccggattagtcgtcca-ctttgatggatcgaaaacgagtgcgaaagcc |
58 |
Q |
| |
|
|||||||||||||||||||| |||||| ||||||||| ||| |||| ||||||||||| |
|
|
| T |
20116667 |
ctacgcatgagccggattagccgtccacctttgatgggtcggaaaccggtgcgaaagcc |
20116609 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 35443920 - 35443875
Alignment:
| Q |
1 |
ctacgcatgagccggattagtcgtccact-ttgatggatcgaaaac |
45 |
Q |
| |
|
||||||||||||||||||||||||||| | ||||||||||| |||| |
|
|
| T |
35443920 |
ctacgcatgagccggattagtcgtccattattgatggatcggaaac |
35443875 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 44548774 - 44548721
Alignment:
| Q |
6 |
catgagccggattagtcgtccac-tttgatggatcgaaaacgagtgcgaaagcc |
58 |
Q |
| |
|
|||||||| |||||||||||||| |||||||||||| |||| ||||||||||| |
|
|
| T |
44548774 |
catgagccagattagtcgtccacctttgatggatcggaaactggtgcgaaagcc |
44548721 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 25549779 - 25549819
Alignment:
| Q |
1 |
ctacgcatgagccggattagtcgtcca-ctttgatggatcg |
40 |
Q |
| |
|
||||||| ||||||||||||||||||| ||||||||||||| |
|
|
| T |
25549779 |
ctacgcacgagccggattagtcgtccatctttgatggatcg |
25549819 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 29422267 - 29422323
Alignment:
| Q |
2 |
tacgcatgagccggattagtcgtcca-ctttgatggatcgaaaacgagtgcgaaagc |
57 |
Q |
| |
|
|||||| ||||||||||||||||||| ||||||||||||| ||| |||||||||| |
|
|
| T |
29422267 |
tacgcacgagccggattagtcgtccacctttgatggatcggaaatcggtgcgaaagc |
29422323 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 18374065 - 18374110
Alignment:
| Q |
1 |
ctacgcatgagccggattagtcgtcc-actttgatggatcgaaaac |
45 |
Q |
| |
|
|||||||||||||||||||||||||| |||||| ||| |||||||| |
|
|
| T |
18374065 |
ctacgcatgagccggattagtcgtccaactttggtgggtcgaaaac |
18374110 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 43027360 - 43027405
Alignment:
| Q |
1 |
ctacgcatgagccggattagtcgtcca-ctttgatggatcgaaaac |
45 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||| ||| |||| |
|
|
| T |
43027360 |
ctacgcatgagccggattagtcgtccatctttgatgggtcggaaac |
43027405 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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