View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17442_low_15 (Length: 305)
Name: NF17442_low_15
Description: NF17442
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17442_low_15 |
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Alignment Details
Target: chr7 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 18 - 259
Target Start/End: Complemental strand, 25536160 - 25535919
Alignment:
| Q |
18 |
gatttttgatttgtttttaaatagcatctctgttcgtaattaatgtaagtcaaaacaaagtcataagcaaaataaacacttcatcttctcaaactaaaca |
117 |
Q |
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| T |
25536160 |
gattttcgatttgtttttaaatagcatctctgttcgtaattaatgtaagtcaaaacaaagtcataagcaaaataaacacttcatcttctcaaactaaaca |
25536061 |
T |
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| Q |
118 |
ggtttaattaagaaagtaccgtgttaagacgattgtgctggtagtatataagaaaaaagatgctagagtatgtatcattttcatttaccaaaatcagaag |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
25536060 |
ggtttaattaagaaagtaccgtgttaagacgattgtgctggtagtatataagaaaaaagatgctagagtttgtatcattttcatttaccaaaatcagaag |
25535961 |
T |
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| Q |
218 |
ttagttcgaaatcttagggtttcattcaattcaacaatgtca |
259 |
Q |
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||||||||||||||||||||||||||||| |||||||||||| |
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| T |
25535960 |
ttagttcgaaatcttagggtttcattcaactcaacaatgtca |
25535919 |
T |
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