View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17442_low_8 (Length: 387)

Name: NF17442_low_8
Description: NF17442
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17442_low_8
NF17442_low_8
[»] chr3 (59 HSPs)
chr3 (1-339)||(33251367-33251705)
chr3 (14-101)||(7613003-7613090)
chr3 (28-102)||(15320128-15320202)
chr3 (4-101)||(10855327-10855424)
chr3 (14-102)||(42412851-42412939)
chr3 (30-102)||(54261168-54261240)
chr3 (14-101)||(13893869-13893956)
chr3 (27-101)||(29127862-29127936)
chr3 (27-101)||(45877397-45877471)
chr3 (3-101)||(51683020-51683118)
chr3 (30-101)||(46529963-46530034)
chr3 (34-101)||(48341963-48342030)
chr3 (3-101)||(3755513-3755611)
chr3 (15-101)||(7310781-7310867)
chr3 (3-101)||(55069745-55069843)
chr3 (30-98)||(6462358-6462426)
chr3 (1-101)||(26207865-26207965)
chr3 (30-101)||(24146421-24146492)
chr3 (30-101)||(25294903-25294974)
chr3 (30-105)||(47471771-47471846)
chr3 (30-101)||(49198294-49198365)
chr3 (15-101)||(7650170-7650256)
chr3 (15-101)||(35315899-35315985)
chr3 (3-100)||(35923689-35923786)
chr3 (30-102)||(29762248-29762320)
chr3 (1-97)||(30767311-30767407)
chr3 (30-101)||(11687202-11687273)
chr3 (54-101)||(26362082-26362129)
chr3 (15-102)||(29135855-29135942)
chr3 (30-101)||(47749197-47749268)
chr3 (30-101)||(51060374-51060445)
chr3 (30-104)||(10043090-10043164)
chr3 (3-101)||(30045764-30045862)
chr3 (3-101)||(41630578-41630676)
chr3 (30-72)||(53649699-53649741)
chr3 (30-102)||(3762993-3763065)
chr3 (30-102)||(11025465-11025536)
chr3 (14-98)||(31072824-31072908)
chr3 (30-102)||(47219086-47219158)
chr3 (30-101)||(10040500-10040571)
chr3 (6-97)||(30735014-30735105)
chr3 (3-102)||(32873615-32873713)
chr3 (3-102)||(37092571-37092670)
chr3 (30-96)||(49082772-49082838)
chr3 (15-101)||(52011046-52011132)
chr3 (1-101)||(19146906-19147004)
chr3 (35-96)||(33560808-33560869)
chr3 (1-102)||(39849014-39849114)
chr3 (1-102)||(49543461-49543562)
chr3 (3-72)||(52364866-52364935)
chr3 (34-98)||(11249843-11249907)
chr3 (27-94)||(6286075-6286142)
chr3 (15-102)||(7328786-7328873)
chr3 (15-101)||(40944826-40944912)
chr3 (29-102)||(3136785-3136858)
chr3 (52-101)||(34374533-34374581)
chr3 (29-66)||(34662411-34662448)
chr3 (30-74)||(15795586-15795630)
chr3 (30-102)||(43738387-43738458)
[»] chr1 (63 HSPs)
chr1 (14-102)||(15465908-15465996)
chr1 (3-101)||(5855466-5855564)
chr1 (4-101)||(40288544-40288641)
chr1 (3-102)||(12744589-12744688)
chr1 (3-102)||(12755579-12755678)
chr1 (3-101)||(18649418-18649516)
chr1 (3-101)||(48798136-48798234)
chr1 (3-101)||(51437413-51437511)
chr1 (28-101)||(10422732-10422805)
chr1 (1-101)||(30927791-30927892)
chr1 (15-100)||(41663934-41664019)
chr1 (3-103)||(47312965-47313064)
chr1 (7-102)||(937556-937650)
chr1 (30-103)||(49078056-49078129)
chr1 (1-101)||(18915811-18915911)
chr1 (30-102)||(34877933-34878005)
chr1 (1-101)||(41696662-41696761)
chr1 (32-100)||(42744732-42744800)
chr1 (30-97)||(892390-892457)
chr1 (3-98)||(2567223-2567318)
chr1 (10-101)||(11397962-11398052)
chr1 (10-97)||(32150995-32151082)
chr1 (3-102)||(50503427-50503526)
chr1 (4-101)||(26660082-26660179)
chr1 (30-103)||(41743215-41743288)
chr1 (1-101)||(2980995-2981095)
chr1 (38-98)||(10173072-10173132)
chr1 (30-97)||(32819-32886)
chr1 (4-103)||(14254335-14254434)
chr1 (15-102)||(17642082-17642169)
chr1 (3-102)||(18808208-18808307)
chr1 (3-101)||(8905217-8905314)
chr1 (3-85)||(9659245-9659326)
chr1 (3-101)||(10336460-10336558)
chr1 (27-101)||(33004105-33004179)
chr1 (3-101)||(34719720-34719818)
chr1 (30-102)||(15238199-15238271)
chr1 (49-101)||(21429710-21429762)
chr1 (14-102)||(31152659-31152747)
chr1 (30-102)||(33418208-33418280)
chr1 (30-101)||(5503975-5504046)
chr1 (15-102)||(8763934-8764021)
chr1 (10-65)||(13262063-13262118)
chr1 (30-81)||(17358564-17358615)
chr1 (34-85)||(25178672-25178723)
chr1 (15-102)||(26325755-26325842)
chr1 (3-101)||(17389716-17389813)
chr1 (15-81)||(34334373-34334439)
chr1 (3-103)||(9853343-9853442)
chr1 (30-102)||(25165345-25165416)
chr1 (30-102)||(34697278-34697350)
chr1 (3-62)||(16263528-16263587)
chr1 (27-102)||(18708630-18708705)
chr1 (3-102)||(43959887-43959986)
chr1 (27-102)||(46929827-46929902)
chr1 (3-85)||(14357715-14357797)
chr1 (15-97)||(32142924-32143005)
chr1 (53-102)||(12036860-12036909)
chr1 (3-72)||(16956439-16956508)
chr1 (1-102)||(17092541-17092642)
chr1 (5-101)||(28416889-28416986)
chr1 (30-91)||(45361975-45362036)
chr1 (53-101)||(17988775-17988823)
[»] chr7 (51 HSPs)
chr7 (3-103)||(22268094-22268194)
chr7 (3-102)||(1605886-1605985)
chr7 (3-106)||(43862037-43862140)
chr7 (34-101)||(43346875-43346942)
chr7 (15-101)||(10047953-10048039)
chr7 (3-101)||(17748447-17748545)
chr7 (1-98)||(36619317-36619414)
chr7 (10-103)||(37514865-37514958)
chr7 (30-106)||(48804624-48804700)
chr7 (3-101)||(14650263-14650361)
chr7 (15-101)||(43925458-43925544)
chr7 (3-102)||(4228819-4228915)
chr7 (1-102)||(22973912-22974013)
chr7 (1-102)||(22993430-22993531)
chr7 (3-98)||(1797409-1797504)
chr7 (10-101)||(4195274-4195365)
chr7 (30-101)||(4973202-4973273)
chr7 (15-102)||(27028224-27028311)
chr7 (3-98)||(29151889-29151984)
chr7 (3-101)||(42210327-42210425)
chr7 (30-103)||(5039510-5039583)
chr7 (3-99)||(34659174-34659270)
chr7 (30-101)||(16802069-16802140)
chr7 (15-102)||(21530693-21530780)
chr7 (30-101)||(27875180-27875250)
chr7 (30-104)||(29805531-29805605)
chr7 (3-97)||(42032046-42032140)
chr7 (15-101)||(47341822-47341908)
chr7 (30-95)||(9685691-9685756)
chr7 (14-98)||(5069891-5069975)
chr7 (30-98)||(11607080-11607148)
chr7 (30-102)||(19914794-19914866)
chr7 (30-102)||(34127712-34127784)
chr7 (14-82)||(45853596-45853664)
chr7 (15-102)||(13095803-13095890)
chr7 (53-100)||(13845331-13845378)
chr7 (30-101)||(18785615-18785686)
chr7 (27-98)||(24969413-24969484)
chr7 (3-101)||(26423352-26423450)
chr7 (52-102)||(44961752-44961802)
chr7 (11-104)||(4706057-4706150)
chr7 (28-101)||(8734776-8734849)
chr7 (1-102)||(9813921-9814021)
chr7 (29-102)||(14537811-14537884)
chr7 (1-97)||(23658130-23658225)
chr7 (30-73)||(21190872-21190915)
chr7 (3-102)||(22573758-22573856)
chr7 (28-62)||(48244446-48244480)
chr7 (30-99)||(20247262-20247330)
chr7 (30-102)||(39474884-39474957)
chr7 (53-101)||(25197232-25197280)
[»] scaffold0170 (1 HSPs)
scaffold0170 (3-102)||(9790-9889)
[»] chr6 (30 HSPs)
chr6 (3-102)||(14107423-14107522)
chr6 (1-102)||(8612037-8612138)
chr6 (3-101)||(29333204-29333301)
chr6 (30-102)||(2271393-2271465)
chr6 (14-101)||(3030694-3030781)
chr6 (3-101)||(21898595-21898693)
chr6 (1-102)||(24671929-24672030)
chr6 (4-103)||(9179802-9179901)
chr6 (15-98)||(13036081-13036164)
chr6 (15-101)||(5253300-5253386)
chr6 (15-101)||(8932608-8932694)
chr6 (3-101)||(8938658-8938756)
chr6 (15-101)||(8944074-8944160)
chr6 (3-76)||(12606402-12606475)
chr6 (30-102)||(6606189-6606261)
chr6 (3-103)||(9147246-9147346)
chr6 (29-101)||(19230649-19230720)
chr6 (30-101)||(21016843-21016914)
chr6 (3-94)||(34954684-34954774)
chr6 (29-90)||(9366514-9366575)
chr6 (30-102)||(15643921-15643992)
chr6 (31-102)||(10311562-10311633)
chr6 (10-72)||(4596109-4596171)
chr6 (3-101)||(29444830-29444928)
chr6 (1-97)||(32048402-32048498)
chr6 (3-98)||(3601034-3601129)
chr6 (34-101)||(13468880-13468947)
chr6 (30-97)||(30788943-30789010)
chr6 (3-97)||(11142554-11142648)
chr6 (53-102)||(5759574-5759623)
[»] chr8 (36 HSPs)
chr8 (3-101)||(8141049-8141147)
chr8 (15-102)||(2467195-2467282)
chr8 (29-102)||(3418604-3418677)
chr8 (1-97)||(33401862-33401958)
chr8 (3-101)||(38922479-38922577)
chr8 (1-101)||(13085471-13085571)
chr8 (1-101)||(44893341-44893441)
chr8 (30-101)||(43027252-43027323)
chr8 (3-101)||(6100419-6100517)
chr8 (4-101)||(1013043-1013140)
chr8 (1-101)||(9860058-9860159)
chr8 (30-102)||(15884647-15884719)
chr8 (30-101)||(14666163-14666234)
chr8 (28-102)||(9395908-9395982)
chr8 (3-101)||(10535469-10535566)
chr8 (30-103)||(8997636-8997709)
chr8 (1-102)||(17981387-17981488)
chr8 (41-101)||(17845680-17845740)
chr8 (2-102)||(24837188-24837288)
chr8 (4-101)||(34613844-34613941)
chr8 (30-101)||(583761-583832)
chr8 (42-101)||(7673758-7673816)
chr8 (30-101)||(14846523-14846594)
chr8 (30-101)||(22810027-22810098)
chr8 (2-101)||(29933720-29933818)
chr8 (30-101)||(34846761-34846831)
chr8 (28-101)||(24938652-24938725)
chr8 (29-102)||(30903282-30903355)
chr8 (30-102)||(2964022-2964094)
chr8 (14-102)||(6940504-6940592)
chr8 (30-101)||(10927553-10927624)
chr8 (2-97)||(44031504-44031599)
chr8 (30-101)||(45521116-45521187)
chr8 (4-98)||(68164-68258)
chr8 (30-102)||(16893883-16893955)
chr8 (41-101)||(34723726-34723786)
[»] chr2 (59 HSPs)
chr2 (15-101)||(12864167-12864253)
chr2 (3-101)||(18902595-18902693)
chr2 (15-101)||(34356149-34356235)
chr2 (1-101)||(7747217-7747317)
chr2 (3-101)||(14169674-14169772)
chr2 (1-102)||(2528404-2528505)
chr2 (3-98)||(21286390-21286485)
chr2 (15-101)||(331444-331530)
chr2 (3-101)||(38005345-38005443)
chr2 (3-101)||(38962706-38962804)
chr2 (1-101)||(15079426-15079526)
chr2 (1-101)||(44193422-44193522)
chr2 (42-101)||(3598856-3598915)
chr2 (10-101)||(19976879-19976970)
chr2 (30-101)||(20612628-20612699)
chr2 (15-102)||(29422157-29422244)
chr2 (3-101)||(10026681-10026779)
chr2 (1-98)||(16034883-16034980)
chr2 (30-91)||(25549681-25549742)
chr2 (30-101)||(2550811-2550882)
chr2 (28-102)||(3643977-3644051)
chr2 (15-101)||(8410074-8410160)
chr2 (3-101)||(14853432-14853530)
chr2 (3-85)||(25540469-25540551)
chr2 (3-101)||(42770716-42770814)
chr2 (3-101)||(44139427-44139525)
chr2 (12-101)||(22593078-22593167)
chr2 (3-84)||(41220595-41220676)
chr2 (30-102)||(13026503-13026575)
chr2 (53-101)||(21180429-21180477)
chr2 (3-103)||(45263732-45263832)
chr2 (3-101)||(2149259-2149358)
chr2 (30-101)||(10046568-10046639)
chr2 (30-101)||(23500774-23500844)
chr2 (10-101)||(40968987-40969078)
chr2 (15-101)||(3811768-3811854)
chr2 (3-101)||(11069821-11069919)
chr2 (4-102)||(16813231-16813328)
chr2 (4-102)||(16852510-16852607)
chr2 (29-98)||(28616470-28616540)
chr2 (27-101)||(29653571-29653644)
chr2 (16-97)||(7787003-7787084)
chr2 (53-94)||(34722631-34722672)
chr2 (1-102)||(39201571-39201672)
chr2 (30-98)||(4080409-4080477)
chr2 (1-101)||(41031969-41032068)
chr2 (30-101)||(18649118-18649189)
chr2 (27-102)||(20963199-20963273)
chr2 (30-101)||(44945537-44945608)
chr2 (5-103)||(3848981-3849079)
chr2 (3-101)||(10669535-10669633)
chr2 (43-101)||(44773208-44773266)
chr2 (53-98)||(9251409-9251454)
chr2 (3-72)||(10823032-10823101)
chr2 (30-98)||(20533064-20533132)
chr2 (53-97)||(24179518-24179562)
chr2 (6-102)||(34130370-34130464)
chr2 (30-98)||(37560119-37560187)
chr2 (30-94)||(39806977-39807041)
[»] chr5 (54 HSPs)
chr5 (1-102)||(12704957-12705058)
chr5 (15-101)||(1538375-1538461)
chr5 (1-102)||(9812815-9812916)
chr5 (3-102)||(41163525-41163623)
chr5 (3-101)||(25417248-25417345)
chr5 (3-101)||(26077085-26077183)
chr5 (30-102)||(3654004-3654076)
chr5 (30-102)||(12766074-12766146)
chr5 (3-102)||(5731985-5732084)
chr5 (3-102)||(30349522-30349621)
chr5 (3-102)||(38897784-38897882)
chr5 (15-101)||(18136357-18136443)
chr5 (15-101)||(19572668-19572754)
chr5 (3-101)||(42086271-42086369)
chr5 (1-102)||(7866524-7866625)
chr5 (30-102)||(2485140-2485212)
chr5 (15-103)||(28857070-28857158)
chr5 (30-101)||(6767143-6767214)
chr5 (30-101)||(8513463-8513534)
chr5 (27-98)||(18327717-18327788)
chr5 (30-101)||(35403604-35403675)
chr5 (15-101)||(35561895-35561981)
chr5 (14-103)||(7308440-7308529)
chr5 (29-102)||(14728025-14728098)
chr5 (10-102)||(38297036-38297128)
chr5 (34-101)||(18294579-18294646)
chr5 (3-62)||(21149717-21149776)
chr5 (30-101)||(28856921-28856992)
chr5 (3-93)||(1898953-1899043)
chr5 (4-98)||(23247417-23247511)
chr5 (30-103)||(1826799-1826872)
chr5 (30-103)||(20222998-20223071)
chr5 (52-101)||(23383592-23383641)
chr5 (28-101)||(24498927-24499000)
chr5 (30-107)||(39728325-39728402)
chr5 (30-102)||(20525781-20525853)
chr5 (3-102)||(20682682-20682782)
chr5 (15-81)||(30995085-30995151)
chr5 (17-102)||(5079274-5079359)
chr5 (1-94)||(14152001-14152094)
chr5 (30-98)||(20692880-20692948)
chr5 (3-82)||(14588682-14588761)
chr5 (30-85)||(28862785-28862840)
chr5 (3-101)||(31890032-31890132)
chr5 (30-101)||(37263185-37263256)
chr5 (3-81)||(11845866-11845944)
chr5 (30-72)||(13664233-13664275)
chr5 (30-100)||(36783193-36783263)
chr5 (53-102)||(24500092-24500141)
chr5 (1-98)||(35638096-35638193)
chr5 (29-101)||(16755005-16755077)
chr5 (37-101)||(20255313-20255377)
chr5 (29-97)||(25950673-25950741)
chr5 (30-102)||(41800920-41800992)
[»] chr4 (48 HSPs)
chr4 (3-101)||(33647669-33647767)
chr4 (3-102)||(2559254-2559353)
chr4 (2-101)||(41162946-41163045)
chr4 (15-101)||(1446774-1446860)
chr4 (15-101)||(29895735-29895821)
chr4 (3-101)||(52950030-52950128)
chr4 (3-101)||(53599008-53599106)
chr4 (1-101)||(12703608-12703708)
chr4 (3-102)||(13073485-13073584)
chr4 (3-102)||(38165974-38166073)
chr4 (15-101)||(6779159-6779245)
chr4 (3-101)||(24166398-24166496)
chr4 (3-101)||(47078406-47078504)
chr4 (32-101)||(27248376-27248445)
chr4 (30-102)||(27531749-27531821)
chr4 (3-102)||(14123963-14124062)
chr4 (30-85)||(15840026-15840081)
chr4 (30-101)||(38075381-38075452)
chr4 (15-102)||(55920981-55921068)
chr4 (31-101)||(34667695-34667765)
chr4 (52-101)||(19651559-19651608)
chr4 (14-102)||(1940850-1940938)
chr4 (1-101)||(41339458-41339558)
chr4 (30-101)||(7000472-7000543)
chr4 (30-101)||(8888970-8889041)
chr4 (30-101)||(26480041-26480112)
chr4 (30-101)||(43458561-43458632)
chr4 (29-98)||(6032731-6032800)
chr4 (30-95)||(13552068-13552133)
chr4 (34-102)||(3574542-3574610)
chr4 (1-101)||(4736545-4736645)
chr4 (26-73)||(21192618-21192665)
chr4 (30-107)||(5472940-5473017)
chr4 (30-71)||(14567937-14567978)
chr4 (52-101)||(15829647-15829696)
chr4 (30-102)||(15732540-15732612)
chr4 (55-103)||(20354583-20354631)
chr4 (2-98)||(54524883-54524979)
chr4 (3-66)||(3159534-3159597)
chr4 (42-101)||(31588632-31588691)
chr4 (3-85)||(36145280-36145362)
chr4 (3-68)||(7246711-7246776)
chr4 (53-102)||(14567198-14567247)
chr4 (33-98)||(14858662-14858727)
chr4 (15-96)||(20421727-20421807)
chr4 (3-96)||(40272396-40272489)
chr4 (3-68)||(43468328-43468393)
chr4 (3-68)||(48015138-48015203)
[»] scaffold0009 (2 HSPs)
scaffold0009 (4-101)||(9382-9479)
scaffold0009 (30-96)||(42924-42990)
[»] scaffold0002 (3 HSPs)
scaffold0002 (3-102)||(319368-319466)
scaffold0002 (1-101)||(516-616)
scaffold0002 (30-101)||(412118-412189)
[»] scaffold0316 (1 HSPs)
scaffold0316 (14-100)||(1690-1776)
[»] scaffold0086 (1 HSPs)
scaffold0086 (1-101)||(26129-26229)
[»] scaffold0006 (1 HSPs)
scaffold0006 (14-102)||(68462-68550)
[»] scaffold0029 (1 HSPs)
scaffold0029 (30-101)||(40990-41061)
[»] scaffold0050 (1 HSPs)
scaffold0050 (3-72)||(72608-72676)
[»] scaffold0016 (1 HSPs)
scaffold0016 (52-101)||(8824-8873)
[»] scaffold0376 (1 HSPs)
scaffold0376 (30-102)||(12615-12687)
[»] scaffold0332 (1 HSPs)
scaffold0332 (27-98)||(15280-15351)
[»] scaffold0209 (1 HSPs)
scaffold0209 (30-101)||(12521-12592)
[»] scaffold0010 (1 HSPs)
scaffold0010 (30-101)||(25876-25947)
[»] scaffold0005 (3 HSPs)
scaffold0005 (30-71)||(249397-249438)
scaffold0005 (14-101)||(271150-271237)
scaffold0005 (53-102)||(250128-250177)
[»] scaffold0079 (1 HSPs)
scaffold0079 (30-71)||(8151-8192)


Alignment Details
Target: chr3 (Bit Score: 307; Significance: 1e-173; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 307; E-Value: 1e-173
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 33251705 - 33251367
Alignment:
Q  1 cacactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggt 100  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||| |||| ||||||||||||||    
T  33251705 cacactggccaaacgttgttcccaccgggaatcgaacccggtattcccctaatacgtccttggaaggagctcattgccaccggagcccaaacaacttggt 33251606  T
Q  101 tttaaatcattgatttccatttgttcaaaacaataaataaataattaaattcatccaagaatcaagcctataatccgcatatcaaagaataacctatatc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  33251605 tttaaatcattgatttccatttgttcaaaacaataaataaataattaaattcatccaagaatcaagcctataatccgcatatcaaagaataacctctatc 33251506  T
Q  201 aacgacatttatatgcttatataagacaccaggggttacgtactacattcagtttctattgaaaattaggtccttcatctcctttgtgacgttgattagt 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  33251505 aacgacatttatatgcttatataagacaccaggggttacgtactacattcagtttctattgaaaattaggtccttcatctcctttgtgacgttgattggt 33251406  T
Q  301 atgtatccagcgggtatggtaagttgtaacattgaaaca 339  Q
    |||||||||||||||||||||||||||||||||||||||    
T  33251405 atgtatccagcgggtatggtaagttgtaacattgaaaca 33251367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 7613003 - 7613090
Alignment:
Q  14 cgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||||||| | || |||||||||||||||||||||| |||||||||||||||||||| ||| ||||| |||||||||| |||||||    
T  7613003 cgttgttccccctgggaatcgaacccggtattccccaagtacgtccttggaaggagctccttgccactgaagtccaaacagcttggtt 7613090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 28 - 102
Target Start/End: Complemental strand, 15320202 - 15320128
Alignment:
Q  28 gaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    ||||||||||||||||||||||   |||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  15320202 gaaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagtccaaacaacttggttt 15320128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 4 - 101
Target Start/End: Complemental strand, 10855424 - 10855327
Alignment:
Q  4 actggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||| ||| |||||||||| | ||||||| ||||||||||| ||||| ||| |||||||||||||||| ||| |||||||| |||||||||||||||    
T  10855424 actggccaagcgttgttccccctggaaatcaaacccggtatttcccaagtacatccttggaaggagctccttgccactggagcccaaacaacttggtt 10855327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 42412851 - 42412939
Alignment:
Q  14 cgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    |||||||||| |||| ||||||||||||||||||||  ||||||||||||||||||||| ||| || ||||| |||| |||||||||||    
T  42412851 cgttgttccccccgggaatcgaacccggtattccccggatacgtccttggaaggagctccttgccattggagcccaagcaacttggttt 42412939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 30 - 102
Target Start/End: Complemental strand, 54261240 - 54261168
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    |||||||||||||||||||||  |||||||||||||||||||| ||| |||||||| ||||||||||||||||    
T  54261240 aatcgaacccggtattccccaggtacgtccttggaaggagctccttgccactggagcccaaacaacttggttt 54261168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 13893956 - 13893869
Alignment:
Q  14 cgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||||||| | ||||||| |||||||||||||||  | ||||||||||||||||||| ||| |||||||| |||||||||||||||    
T  13893956 cgttgttccccctggaaatccaacccggtattccccggacacgtccttggaaggagctccttgccactggagcccaaacaacttggtt 13893869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 27 - 101
Target Start/End: Complemental strand, 29127936 - 29127862
Alignment:
Q  27 ggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||||||||||| ||||||||| ||||||||||||||||| ||| ||| |||||||| |||||||||||||||    
T  29127936 ggaaatcgaacccgatattccccagatacgtccttggaaggatctccttgccactggagcccaaacaacttggtt 29127862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 27 - 101
Target Start/End: Complemental strand, 45877471 - 45877397
Alignment:
Q  27 ggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||||||||||||||||||||  |||||||||||||||| |||| ||| |||||||| |||||||||||||||    
T  45877471 ggaaatcgaacccggtattccccggatacgtccttggaaggggctccttgccactggagcccaaacaacttggtt 45877397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 51683020 - 51683118
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||||||| |||||||||| | || ||||||||| ||||||||||  ||||||| ||||||||||||| | | |||||||| |||||||||||||||    
T  51683020 cactggtcaagcgttgttccccctgggaatcgaacctggtattccccggatacgtctttggaaggagctcctcgccactggagcccaaacaacttggtt 51683118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 46529963 - 46530034
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||||||||||||||||||  |||||||||| ||||||||| ||| |||||||| |||||||||||||||    
T  46529963 aatcgaacccggtattccccaggtacgtccttgaaaggagctccttgccactggagcccaaacaacttggtt 46530034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 101
Target Start/End: Complemental strand, 48342030 - 48341963
Alignment:
Q  34 gaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||||||||||||||  |||||||||||||||||||| ||| |||||||| |||||||||||||||    
T  48342030 gaacccggtattccccaggtacgtccttggaaggagctccttgccactggagcccaaacaacttggtt 48341963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 3755611 - 3755513
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||||||||||||||||  | || |||||||  |||||||||||  ||||||||||| || |||||| ||| ||||||||||||| ||||||||||    
T  3755611 cactggtcaaacgttgttcctcctgggaatcgaagtcggtattccccggatacgtccttgaaaagagctctttgccactggagtccaagcaacttggtt 3755513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 7310781 - 7310867
Alignment:
Q  15 gttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||||||| || |||||||||||||||||| ||  ||||| |||||||||||||||||| ||| |||| |||| ||||||||||    
T  7310781 gttgttcccactgggaatcgaacccggtattcctcaggtacgttcttggaaggagctcattgccaccggagcccaatcaacttggtt 7310867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 55069745 - 55069843
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||| ||||||||||||||    | |||| ||||| ||||||||  |||||||||||| || ||||||||||||||||||| |||||||||||||||    
T  55069745 cactggccaaacgttgttccctataggaatcaaacccagtattccctgaatacgtccttgaaaagagctcattgtcactggagcccaaacaacttggtt 55069843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 6462426 - 6462358
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttg 98  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||| |||| ||| |||| |||||||    
T  6462426 aatcgaacccggtattccccagatacgtccttggaaggagctccttgccactagagcccaagcaacttg 6462358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 26207865 - 26207965
Alignment:
Q  1 cacactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggt 100  Q
    |||||||| ||| ||||||||||   || ||||||||||||||||||||   ||| |||||||||||||||| ||| |||||||| |||| |||||||||    
T  26207865 cacactggacaagcgttgttccccgtgggaatcgaacccggtattccccgggtacatccttggaaggagctccttgccactggagcccaagcaacttggt 26207964  T
Q  101 t 101  Q
    |    
T  26207965 t 26207965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 24146421 - 24146492
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||| |||||| ||||||||| ||| ||||||||||||||||| ||||||||| | ||||||||||||||||    
T  24146421 aatcaaacccgatattccccagatatgtccttggaaggagctccttgtcactgaaatccaaacaacttggtt 24146492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 25294974 - 25294903
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||| |||||||||||||||  ||||||||||||||||||||| ||| |||||||| |||| ||||||||||    
T  25294974 aatcaaacccggtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaacttggtt 25294903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 30 - 105
Target Start/End: Complemental strand, 47471846 - 47471771
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttttaa 105  Q
    ||||||||||||||||||| |  |||||||||||||||||||| ||| |||| ||| |||| ||||||||||||||    
T  47471846 aatcgaacccggtattccctaggtacgtccttggaaggagctctttgccactagagcccaagcaacttggttttaa 47471771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 49198365 - 49198294
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||||||||||||||||  ||| ||||||||||| | ||| |||||||||||| |||||||||||||||    
T  49198365 aatcgaacccggtattccccggatatgtccttggaagaaactccttgtcactggagcccaaacaacttggtt 49198294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 7650256 - 7650170
Alignment:
Q  15 gttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||||| | |||||||||||||||||||||| || ||| |||||| ||||| ||| ||| |||||||  |||||||||||||||    
T  7650256 gttgttccccctggaaatcgaacccggtattccctaagtacatccttgaaaggaactccttgccactggaacccaaacaacttggtt 7650170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 35315985 - 35315899
Alignment:
Q  15 gttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||||| | || ||||||||||| ||||| ||   |||||||||||||||||||| ||| |||||||| |||||||||||||||    
T  35315985 gttgttccccctgggaatcgaacccgatattctccgggtacgtccttggaaggagctctttgccactggagcccaaacaacttggtt 35315899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 35923689 - 35923786
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggt 100  Q
    |||||| |||||||||||||| |    ||||||||| ||||||| |||  ||||||||||||| |||||||||| |||| ||| ||||||||||||||    
T  35923689 cactggccaaacgttgttccccctatgaatcgaacctggtattctccaggtacgtccttggaatgagctcattgccactagagcccaaacaacttggt 35923786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 30 - 102
Target Start/End: Original strand, 29762248 - 29762320
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    ||||| ||||| |||||||| ||||| |||||||||||||||| ||| |||||||| |||| |||||||||||    
T  29762248 aatcggacccgatattccccgaatacatccttggaaggagctccttgccactggagcccaagcaacttggttt 29762320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 30767311 - 30767407
Alignment:
Q  1 cacactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaactt 97  Q
    |||||||| |||  ||||||||| | |||||||||||||| |||||||||  ||| |||||||||||| ||| ||| |||||||| |||| ||||||    
T  30767311 cacactggccaagtgttgttccccctggaaatcgaacccgatattccccaggtacatccttggaaggaactccttgccactggagcccaagcaactt 30767407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 11687202 - 11687273
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||| |||||||||||| |||  |||||||||||||||||||  ||| |||||||| |||||||||||||||    
T  11687202 aatcaaacccggtattctccaggtacgtccttggaaggagcttcttgccactggagcccaaacaacttggtt 11687273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 54 - 101
Target Start/End: Original strand, 26362082 - 26362129
Alignment:
Q  54 acgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||||||||||||||||||||||||||||||||||| || ||||||    
T  26362082 acgtccttggaaggagctcattgtcactggagtccaaagaatttggtt 26362129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 29135942 - 29135855
Alignment:
Q  15 gttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    ||||||||| | || ||||||| ||||||||||||  ||||||||||||||| ||||| ||| |||||||| |||| ||| |||||||    
T  29135942 gttgttccccctgggaatcgaatccggtattccccggatacgtccttggaagaagctccttgccactggagcccaagcaatttggttt 29135855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 47749197 - 47749268
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||||||||||||||||   ||||||||||||||| ||||||||  |||||||| |||||||| ||||||    
T  47749197 aatcgaacccggtattccctggatacgtccttggaagaagctcattaccactggagcccaaacaatttggtt 47749268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 51060374 - 51060445
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||||||| ||||||||  |||  |||||||||||||||  ||| ||||||||||||||||||||||||    
T  51060374 aatcgaacccgatattccccggatagatccttggaaggagctatttgccactggagtccaaacaacttggtt 51060445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 30 - 104
Target Start/End: Complemental strand, 10043164 - 10043090
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtttta 104  Q
    ||||||||||| ||||||||  ||||||||||| ||||||||||||| || ||||| |||||||| ||| |||||    
T  10043164 aatcgaacccgatattccccggatacgtccttgaaaggagctcattgccagtggagcccaaacaatttgatttta 10043090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 30045862 - 30045764
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||| ||| |||||||||| |  | |||||||||||||||||||||  ||||| |||  ||||||||||||| |||| ||| |||| ||||||||||    
T  30045862 cactggccaagcgttgttccccctaggaatcgaacccggtattccccatgtacgttcttaaaaggagctcattgccacttgagcccaagcaacttggtt 30045764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 41630578 - 41630676
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||| ||| ||||||||||   || ||| ||||||||||||  ||   ||||||| |||||||||||| |||||||||||| |||||||||||||||    
T  41630578 cactgggcaagcgttgttccccttgggaattgaacccggtattttccggttacgtccatggaaggagctccttgtcactggagcccaaacaacttggtt 41630676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 30 - 72
Target Start/End: Complemental strand, 53649741 - 53649699
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctc 72  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  53649741 aatcgaacccggtattccccgaatacgtccttggaaggagctc 53649699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 30 - 102
Target Start/End: Complemental strand, 3763065 - 3762993
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    ||||||| |||||||| |||  ||||||||||| ||||||||| |||||||| |||  |||||||||||||||    
T  3763065 aatcgaatccggtatttcccggatacgtccttgaaaggagctctttgtcactagagctcaaacaacttggttt 3762993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 30 - 102
Target Start/End: Original strand, 11025465 - 11025536
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    ||||||||| ||||||||||| |||||||||||||||| |||| ||  |||||||| |||| |||||||||||    
T  11025465 aatcgaacctggtattccccagatacgtccttggaagg-gctccttaccactggagcccaagcaacttggttt 11025536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 14 - 98
Target Start/End: Complemental strand, 31072908 - 31072824
Alignment:
Q  14 cgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttg 98  Q
    |||||||||| | |||||||||||| ||||||| ||   |||||||||| ||||||||| ||| || ||||| ||||||||||||    
T  31072908 cgttgttccccctggaaatcgaacctggtattctccgggtacgtccttgaaaggagctccttgccattggagcccaaacaacttg 31072824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 30 - 102
Target Start/End: Complemental strand, 47219158 - 47219086
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    ||||||||| ||||||||||  |||||||||||||| |||||||||  ||||| | |||||||||||| ||||    
T  47219158 aatcgaacctggtattccccggatacgtccttggaaagagctcattaccactgaaatccaaacaactttgttt 47219086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 10040571 - 10040500
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||||||| ||||||||   ||||||||| |||||||||| ||| |||||||| |||| ||||||||||    
T  10040571 aatcgaacccgatattccccgggtacgtccttagaaggagctccttgccactggagcccaagcaacttggtt 10040500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 97
Target Start/End: Original strand, 30735014 - 30735105
Alignment:
Q  6 tggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaactt 97  Q
    ||||||| |||||||||| | |  |||||||| ||||||||||| | | ||||||||||| |||||| ||| |||| ||| |||||||||||    
T  30735014 tggtcaagcgttgttccccctgagaatcgaactcggtattccccgagtgcgtccttggaatgagctccttgccactagagcccaaacaactt 30735105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 32873615 - 32873713
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    |||||||||| |||||||| | |  | ||||||||| |||||||||    ||||||||||||| |||||| ||| |||||||| ||||||||||||||||    
T  32873615 cactggtcaagcgttgttctccctaggaatcgaacctggtattcccggg-tacgtccttggaatgagctccttgccactggagcccaaacaacttggttt 32873713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 37092571 - 37092670
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    |||||| ||||||||||||||   ||||||| || ||| |||||| |   |||||||||||||| ||||| ||| |||||||| |||| |||||||||||    
T  37092571 cactggccaaacgttgttccccttggaaatctaatccgatattccacgggtacgtccttggaagaagctccttgccactggagcccaagcaacttggttt 37092670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 49082838 - 49082772
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaact 96  Q
    |||||||| |||||||||||  |||||||||| ||||||||||  || |||||||| ||||||||||    
T  49082838 aatcgaactcggtattccccggatacgtccttagaaggagctccctgccactggagcccaaacaact 49082772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 52011046 - 52011132
Alignment:
Q  15 gttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||||| | || ||||||||||| ||||||   | ||||||||||||||||| || ||| ||||| ||| ||||||||||||||    
T  52011046 gttgttccccctgggaatcgaacccgatattcctggagtacgtccttggaaggagttccttgccactgaagttcaaacaacttggtt 52011132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 19147004 - 19146906
Alignment:
Q  1 cacactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggt 100  Q
    |||||||| ||| |||||||||  | | |||||||| | | | |||||| |||||||  |||||||||||||  ||||||||||||| ||||||||||||    
T  19147004 cacactggccaagcgttgttcctcctgaaaatcgaatctgatcttccccgaatacgttattggaaggagctc--tgtcactggagtctaaacaacttggt 19146907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 33560869 - 33560808
Alignment:
Q  35 aacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaact 96  Q
    ||||||||||||||||  ||| |||||||||||||||| ||| ||||| || ||||||||||    
T  33560869 aacccggtattccccaggtacatccttggaaggagctccttgccactgaagcccaaacaact 33560808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 39849114 - 39849014
Alignment:
Q  1 cacactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggt 100  Q
    |||||||| ||| |||||||||  | || |||||||||||  ||||||  | |||||||||||||||||||| ||| |||||||| |||| | |||||||    
T  39849114 cacactggccaagcgttgttcct-ctgggaatcgaacccgaaattccctgagtacgtccttggaaggagctccttgccactggagcccaagcgacttggt 39849016  T
Q  101 tt 102  Q
    ||    
T  39849015 tt 39849014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 49543562 - 49543461
Alignment:
Q  1 cacactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggt 100  Q
    |||||||  ||||||||||||||   |  ||||||||||| |||||||   ||||||||||||||||||||| ||| ||||  || |||||||| |||||    
T  49543562 cacactgaccaaacgttgttccccatgagaatcgaacccgatattcccgggatacgtccttggaaggagctccttgccactaaagcccaaacaaattggt 49543463  T
Q  101 tt 102  Q
    ||    
T  49543462 tt 49543461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 52364866 - 52364935
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctc 72  Q
    |||||||||| |||||||||  | || |||||||| |||||||||||   ||||||||||||||||||||    
T  52364866 cactggtcaagcgttgttccttctgggaatcgaactcggtattccccgggtacgtccttggaaggagctc 52364935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 11249843 - 11249907
Alignment:
Q  34 gaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttg 98  Q
    |||| |||||||| |||||||| ||||||||| || ||  |||||| ||||||||||||||||||    
T  11249843 gaactcggtattctccaaatacatccttggaatgaacttcttgtcattggagtccaaacaacttg 11249907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 27 - 94
Target Start/End: Complemental strand, 6286142 - 6286075
Alignment:
Q  27 ggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaa 94  Q
    |||||||||| | ||||||||||  |||| |||||||||||||||| ||||||||  || ||||||||    
T  6286142 ggaaatcgaatctggtattcccctgatacttccttggaaggagctccttgtcactaaagcccaaacaa 6286075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 7328873 - 7328786
Alignment:
Q  15 gttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    ||||||||| | || |||||||||||||||| |||   |||||||||||||||| ||| ||| |||| |||  ||| |||||||||||    
T  7328873 gttgttccccctgggaatcgaacccggtatttcccgggtacgtccttggaaggaactccttgccactagagcacaagcaacttggttt 7328786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 40944912 - 40944826
Alignment:
Q  15 gttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||||| | || |||||||| |||||||| |   ||||||||||||||||||||  ||| ||| |||| |||| ||||||||||    
T  40944912 gttgttccccctgggaatcgaactcggtattctctggatacgtccttggaaggagcttcttgccaccggagcccaagcaacttggtt 40944826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 102
Target Start/End: Original strand, 3136785 - 3136858
Alignment:
Q  29 aaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    |||||||| ||||||||||||   |||||||||| ||||||||  ||| ||| |||| ||||||||||| ||||    
T  3136785 aaatcgaatccggtattccccgggtacgtccttgaaaggagcttcttgccacgggagcccaaacaactttgttt 3136858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 101
Target Start/End: Original strand, 34374533 - 34374581
Alignment:
Q  52 atacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||||||||| ||||||| ||||||||| || |||||||||||||||    
T  34374533 atacgtccttgga-ggagctccttgtcactgaagcccaaacaacttggtt 34374581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 66
Target Start/End: Original strand, 34662411 - 34662448
Alignment:
Q  29 aaatcgaacccggtattccccaaatacgtccttggaag 66  Q
    |||||||||||| |||||||||| ||||||||||||||    
T  34662411 aaatcgaacccgatattccccaagtacgtccttggaag 34662448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 74
Target Start/End: Original strand, 15795586 - 15795630
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcat 74  Q
    |||||||| |||||||||||   ||||||||||||||||||||||    
T  15795586 aatcgaactcggtattccccgggtacgtccttggaaggagctcat 15795630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 102
Target Start/End: Complemental strand, 43738458 - 43738387
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    ||||||||||||||||| || | ||||||||| |||| ||||  |||||||||||| | ||||||||| ||||    
T  43738458 aatcgaacccggtattctccga-tacgtcctttgaagaagcttcttgtcactggagccaaaacaactttgttt 43738387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 2e-28; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 14 - 102
Target Start/End: Complemental strand, 15465996 - 15465908
Alignment:
Q  14 cgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    |||||||||| | |||||||||||| ||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||    
T  15465996 cgttgttccccctggaaatcgaacctggtattccccaaatacgtccttggaaggagccctttgtcactggagcccaaacaacttggttt 15465908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 5855564 - 5855466
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||| ||| |||||||||  | || |||||||||||||||||||| |||||||||||||||||||||| ||| |||||||| |||||||||||||||    
T  5855564 cactggccaagcgttgttcctcctgggaatcgaacccggtattccccgaatacgtccttggaaggagctccttgccactggagcccaaacaacttggtt 5855466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 4 - 101
Target Start/End: Original strand, 40288544 - 40288641
Alignment:
Q  4 actggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||| ||| |||||||||| | ||||||||||||||||||||||| ||||||||||||||| |||||| ||| |||| ||| |||| ||||||||||    
T  40288544 actggccaaccgttgttccccctggaaatcgaacccggtattccccgaatacgtccttggaaagagctccttgccactcgagcccaagcaacttggtt 40288641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 12744589 - 12744688
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    |||| ||||| |||||||||| | | |||||||| | | |||||| || |||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  12744589 cactagtcaagcgttgttccccctgaaaatcgaatctgatattcctcagatacgtccttggaaggagttcaatgtcactggagtccaaacaacttggttt 12744688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 12755579 - 12755678
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    |||| ||||| |||||||||| | | |||||||| | | |||||| || |||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  12755579 cactagtcaagcgttgttccccctgaaaatcgaatctgatattcctcagatacgtccttggaaggagttcaatgtcactggagtccaaacaacttggttt 12755678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 18649418 - 18649516
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||||||| |||||||||| | | |||||||||||| ||||| ||| ||||||||||||||||||||||||  |||| |||| ||| ||||||||||    
T  18649418 cactggtcaagcgttgttccccctgaaaatcgaacccgatattctccagatacgtccttggaaggagctcattaccactagagttcaagcaacttggtt 18649516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 48798136 - 48798234
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||| ||||| |||||||||| | |||||||||||||| ||||||||  ||||||| ||||||||||||| ||| |||||||| || ||||||||||||    
T  48798136 cactagtcaagcgttgttccccctggaaatcgaacccgatattccccggatacgtcattggaaggagctccttgccactggagccccaacaacttggtt 48798234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 51437511 - 51437413
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||||||| ||||||||||   || ||||||||||| |||||| |  ||||||||||| ||||||||||||||||||| || |||||||||||||||    
T  51437511 cactggtcaagcgttgttccccatgggaatcgaacccgatattcctcggatacgtccttgaaaggagctcattgtcactgaagcccaaacaacttggtt 51437413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 10422805 - 10422732
Alignment:
Q  28 gaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||||||||||||||||||| |||||||| ||||||||||||| ||| ||||| || |||||||||||||||    
T  10422805 gaaatcgaacccggtattccccgaatacgtcattggaaggagctccttgccactgtagcccaaacaacttggtt 10422732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 30927791 - 30927892
Alignment:
Q  1 cacactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtcc-aaacaacttgg 99  Q
    |||| ||| ||| |||||||||| | |||||||||||||| |||| ||||  |||||||||||||||||||| ||| ||||||||||| |||||||||||    
T  30927791 cacattggccaagcgttgttccctctggaaatcgaacccgatatttcccaggtacgtccttggaaggagctccttgccactggagtccaaaacaacttgg 30927890  T
Q  100 tt 101  Q
    ||    
T  30927891 tt 30927892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 41663934 - 41664019
Alignment:
Q  15 gttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggt 100  Q
    ||||||||| | || ||||||||||||||||||||  |||||||||| |||||||||| ||| |||||||| ||||||||||||||    
T  41663934 gttgttccccctgggaatcgaacccggtattccccggatacgtccttagaaggagctccttgccactggagcccaaacaacttggt 41664019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 3 - 103
Target Start/End: Original strand, 47312965 - 47313064
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    |||||| ||||||||||||||   |||| || |||||||||||||||| ||||||||||||||||| ||| ||| |||||||| |||||||||||| |||    
T  47312965 cactggccaaacgttgttcccctaggaa-tcaaacccggtattccccagatacgtccttggaaggatctcgttgccactggagcccaaacaacttgattt 47313063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 102
Target Start/End: Original strand, 937556 - 937650
Alignment:
Q  7 ggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    |||||| |||||||||| | || ||||||||||| |||||| | | |||||||||| ||| |||||||||||||||||| ||||||||||||||||    
T  937556 ggtcaagcgttgttccccctgggaatcgaacccg-tattcctcgagtacgtccttgaaagaagctcattgtcactggagcccaaacaacttggttt 937650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 49078129 - 49078056
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtttt 103  Q
    ||||||||||||||||||||  |||||||||| |||||||||| ||| |||||||| |||| ||||||||||||    
T  49078129 aatcgaacccggtattccccggatacgtccttagaaggagctccttgccactggagcccaagcaacttggtttt 49078056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 18915911 - 18915811
Alignment:
Q  1 cacactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggt 100  Q
    |||||||| |||  ||||||||| | || ||||||||||||||||||||   |||||||||||||| ||||| ||| ||||| || ||||||||||||||    
T  18915911 cacactggccaagtgttgttccccctgggaatcgaacccggtattccccgggtacgtccttggaagaagctccttgccactgaagcccaaacaacttggt 18915812  T
Q  101 t 101  Q
    |    
T  18915811 t 18915811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 30 - 102
Target Start/End: Complemental strand, 34878005 - 34877933
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    ||||||||| |||||||||| ||||||||||||||||| |||| ||| ||||| || ||||||||||||||||    
T  34878005 aatcgaacctggtattccccgaatacgtccttggaaggtgctccttgccactgaagcccaaacaacttggttt 34877933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 41696662 - 41696761
Alignment:
Q  1 cacactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggt 100  Q
    ||||||||||||  |||  |||| | |||||||||||||| |||||| || ||||||||||||||||||||||||| |||| ||||| || |||||||||    
T  41696662 cacactggtcaagtgttaatccccctggaaatcgaacccg-tattcctcagatacgtccttggaaggagctcattgccactagagtctaagcaacttggt 41696760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 42744800 - 42744732
Alignment:
Q  32 tcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggt 100  Q
    |||||||||||||||||    |||||||||||||||||||||||| ||||||||||||| |||||||||    
T  42744800 tcgaacccggtattccctgggtacgtccttggaaggagctcattgccactggagtccaagcaacttggt 42744732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 30 - 97
Target Start/End: Original strand, 892390 - 892457
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaactt 97  Q
    |||||||||||||||||||| |||||||||||| ||||||||| ||| ||||| || |||||||||||    
T  892390 aatcgaacccggtattccccgaatacgtccttgaaaggagctccttgccactgaagcccaaacaactt 892457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 98
Target Start/End: Complemental strand, 2567318 - 2567223
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttg 98  Q
    |||||| ||| |||||||  | ||| |||||||||||||||||| || |||||||||||||||||||||| ||| || || || ||||||||||||    
T  2567318 cactggccaagcgttgttttccccgaaaatcgaacccggtattctccgaatacgtccttggaaggagctccttgccagtgaagcccaaacaacttg 2567223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 10 - 101
Target Start/End: Original strand, 11397962 - 11398052
Alignment:
Q  10 caaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||||||||||  ||||| ||||||||||||||| ||  |||| |||||||||||||||| ||| |||||||| |||| ||||||||||    
T  11397962 caaacgttgttcccctcggaa-tcgaacccggtattctccggatacatccttggaaggagctccttgccactggagcccaagcaacttggtt 11398052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 32150995 - 32151082
Alignment:
Q  10 caaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaactt 97  Q
    |||| ||||||||| | |||||||||||| | |||||| | || ||||||||||||||||||| ||| |||||||| |||||||||||    
T  32150995 caaatgttgttccccctggaaatcgaacctgatattcctcgaaaacgtccttggaaggagctccttgccactggagcccaaacaactt 32151082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 50503427 - 50503526
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    ||||||||||  ||||||||| | || ||||||||||| ||||||||  ||||||||||| ||||||||| | | |||| ||||||| ||||||||||||    
T  50503427 cactggtcaagtgttgttccccctgggaatcgaacccgatattccccggatacgtccttgaaaggagctcctcgccactagagtccatacaacttggttt 50503526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 4 - 101
Target Start/End: Complemental strand, 26660179 - 26660082
Alignment:
Q  4 actggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||| ||||| |||||||||   ||||||||||||||||||||||| |||||||| || |||| | ||| ||| |||||||| |||| ||||||||||    
T  26660179 actgatcaaatgttgttccccgtggaaatcgaacccggtattccccgaatacgtcattcgaagaaactctttgccactggagcccaagcaacttggtt 26660082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 41743288 - 41743215
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtttt 103  Q
    |||||||||||||||||| |  ||||||||||||||||||||| ||| ||| |||| |||| ||||||||||||    
T  41743288 aatcgaacccggtattcctcggatacgtccttggaaggagctccttgccaccggagcccaagcaacttggtttt 41743215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 2980995 - 2981095
Alignment:
Q  1 cacactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggt 100  Q
    |||||||| |||  ||||||||| | || |||||||||| |||||||||  |||||||| |||||||||||| ||| |||| ||| |||| |||||||||    
T  2980995 cacactggccaagtgttgttcccgctgggaatcgaacccagtattccccggatacgtccctggaaggagctccttgccactagagcccaagcaacttggt 2981094  T
Q  101 t 101  Q
    |    
T  2981095 t 2981095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 38 - 98
Target Start/End: Original strand, 10173072 - 10173132
Alignment:
Q  38 ccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttg 98  Q
    ||||||||||||| ||||||||||||||||||| | ||| |||||||| ||||||||||||    
T  10173072 ccggtattccccagatacgtccttggaaggagcaccttgccactggagcccaaacaacttg 10173132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 97
Target Start/End: Complemental strand, 32886 - 32819
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaactt 97  Q
    ||||| ||||| ||||||||   |||||||||||||||||||||||| |||||||| |||||||||||    
T  32886 aatcggacccgatattcccccggtacgtccttggaaggagctcattgccactggagcccaaacaactt 32819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 103
Target Start/End: Original strand, 14254335 - 14254434
Alignment:
Q  4 actggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtttt 103  Q
    ||||| ||| |||||||||| | | ||||||||| ||||||||||| ||||||||||||||| ||| || ||| | |||||| | || ||||||||||||    
T  14254335 actggccaagcgttgttccccctgaaaatcgaactcggtattccccgaatacgtccttggaatgagttccttgcccctggaggctaagcaacttggtttt 14254434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 17642082 - 17642169
Alignment:
Q  15 gttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    ||||||||| | || |||||||||| ||||| ||    ||||||| |||||||||||| |||||||||||| ||||||||||||||||    
T  17642082 gttgttccccctgggaatcgaacccagtatttcctgggtacgtccgtggaaggagctccttgtcactggagcccaaacaacttggttt 17642169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 102
Target Start/End: Complemental strand, 18808307 - 18808208
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    |||||||||| |||||||||| | |  ||| ||||| | ||||||  | ||||||||||||||| | ||||||| |||||||| ||||||||||||||||    
T  18808307 cactggtcaagcgttgttccctctgagaattgaacctgttattccttagatacgtccttggaagaaactcattgccactggagcccaaacaacttggttt 18808208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 8905217 - 8905314
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||| ||| |||||||||| |  ||||||| ||||| ||||| ||  ||||||| ||||||||||||| ||| |||| |||||||||||||||||||    
T  8905217 cactggccaagcgttgttccc-cttgaaatcgtacccgatattctccggatacgtcattggaaggagctccttgccactagagtccaaacaacttggtt 8905314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 9659245 - 9659326
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggag 85  Q
    |||| |||||||||||||||| | || |||||||||||||||||||| | ||||||||| ||| |||||| ||| ||||||||    
T  9659245 cactagtcaaacgttgttccc-ctgggaatcgaacccggtattccccgagtacgtccttagaatgagctccttgccactggag 9659326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 10336558 - 10336460
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||||||| |||||||||| | | |||||||||||| ||||| ||  ||||||| ||||||||||||| ||| |||||||  ||| | |||||||||    
T  10336558 cactggtcaagcgttgttccccctgaaaatcgaacccgatattctccggatacgtctttggaaggagctccttgccactggaacccagataacttggtt 10336460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 27 - 101
Target Start/End: Original strand, 33004105 - 33004179
Alignment:
Q  27 ggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||||||| ||| ||||||||  ||||||||||||||||||||| |  ||||||||| |||| ||||||||||    
T  33004105 ggaaatcgaatccgatattccccggatacgtccttggaaggagctcctcatcactggagcccaagcaacttggtt 33004179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 34719818 - 34719720
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||||||| |||| ||||||  || |||||||||| ||||||||||  |||||||||||||||||||| ||| || | ||| | | |||||||||||    
T  34719818 cactggtcaagcgttattcccagtgggaatcgaacccagtattccccaggtacgtccttggaaggagctccttgccattagagccaacacaacttggtt 34719720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 30 - 102
Target Start/End: Original strand, 15238199 - 15238271
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    ||||||||||| ||||||| |  |||||||||||||||||||| ||| || ||||| |||| |||||||||||    
T  15238199 aatcgaacccgatattccctaggtacgtccttggaaggagctccttgccattggagcccaagcaacttggttt 15238271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 49 - 101
Target Start/End: Original strand, 21429710 - 21429762
Alignment:
Q  49 caaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||||||||||||||||| |||  ||||||||||| |||||||||||||||    
T  21429710 caaatacgtccttggaaggaactccatgtcactggagcccaaacaacttggtt 21429762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 14 - 102
Target Start/End: Complemental strand, 31152747 - 31152659
Alignment:
Q  14 cgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    |||| ||||| | ||||||||||||||||||||||    ||| ||||||||| |||||| ||| |||| ||| ||||||||||||||||    
T  31152747 cgttattcccccgggaaatcgaacccggtattccctgggtacatccttggaaagagctccttgccactagagcccaaacaacttggttt 31152659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 30 - 102
Target Start/End: Original strand, 33418208 - 33418280
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    ||||||| ||||||||| ||   |||||| ||||||||||||| ||| |||||||| ||||||||||||||||    
T  33418208 aatcgaatccggtattctccgggtacgtctttggaaggagctccttgccactggagcccaaacaacttggttt 33418280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 5504046 - 5503975
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||||| | ||||||||| |||||| || ||||||||||| ||| |||||||  |||||||||||||||    
T  5504046 aatcgaacctgatattccccagatacgttctcggaaggagctccttgccactggaacccaaacaacttggtt 5503975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 8764021 - 8763934
Alignment:
Q  15 gttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    ||||||||| | || || |||||||| ||||||||   |||||||||||||||||||| ||| ||| |||| |||| |||||||||||    
T  8764021 gttgttccccctgggaaacgaacccgatattccccgggtacgtccttggaaggagctccttgccacgggagcccaagcaacttggttt 8763934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 10 - 65
Target Start/End: Complemental strand, 13262118 - 13262063
Alignment:
Q  10 caaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaa 65  Q
    |||||||||||| | | |||||||||||||||||||||||| |||| |||||||||    
T  13262118 caaacgttgttctccctggaaatcgaacccggtattccccatatacatccttggaa 13262063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 30 - 81
Target Start/End: Original strand, 17358564 - 17358615
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcact 81  Q
    ||||||||||||||||||||||||||||||||| || |||||| ||| ||||    
T  17358564 aatcgaacccggtattccccaaatacgtccttgaaatgagctccttgccact 17358615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 34 - 85
Target Start/End: Original strand, 25178672 - 25178723
Alignment:
Q  34 gaacccggtattccccaaatacgtccttggaaggagctcattgtcactggag 85  Q
    |||| ||||||| ||||||||||||||| | |||||||||||||||||||||    
T  25178672 gaactcggtatttcccaaatacgtccttagtaggagctcattgtcactggag 25178723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 26325842 - 26325755
Alignment:
Q  15 gttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    ||||||||| | || ||||||||||| |||||| |  ||||||||||| ||||||||| ||| |||||||| || | |||||||||||    
T  26325842 gttgttcccgctgggaatcgaacccgatattcctcggatacgtccttgaaaggagctccttgccactggagccctagcaacttggttt 26325755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 17389813 - 17389716
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||||||||| |||||||| ||| |||||||| ||| |||| |||  | ||||| ||| ||||||||| ||| ||||||||||||| | ||||||||    
T  17389813 cactggtcaaacattgttccc-ccgaaaatcgaatccgatatttcccggaaacgtcattgaaaggagctccttgccactggagtccaagctacttggtt 17389716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 81
Target Start/End: Original strand, 34334373 - 34334439
Alignment:
Q  15 gttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcact 81  Q
    ||||||||| | || ||||||||||||||||||||  |||||||||||||| |||||| ||| ||||    
T  34334373 gttgttccccctgggaatcgaacccggtattccccggatacgtccttggaatgagctccttgccact 34334439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 103
Target Start/End: Original strand, 9853343 - 9853442
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    ||||||| |||||||||| || |  | ||||||||||||||||  ||   ||| |||||||||||||||| ||| |||||||| || |||||||||||||    
T  9853343 cactggtaaaacgttgtttcccctaggaatcgaacccggtattttccgggtacatccttggaaggagctccttgccactggag-cccaacaacttggttt 9853441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 102
Target Start/End: Complemental strand, 25165416 - 25165345
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    ||||||| |||||||||||||  |||||| ||||||||||||| ||| |||| ||| |||| |||||||||||    
T  25165416 aatcgaatccggtattccccaggtacgtc-ttggaaggagctccttgccactagagcccaagcaacttggttt 25165345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 102
Target Start/End: Complemental strand, 34697350 - 34697278
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    ||||||||| |||||||||| |||||||  ||||||||||||| ||| |||   ||||||| |||||||||||    
T  34697350 aatcgaacctggtattccccgaatacgtttttggaaggagctccttgccaccaaagtccaagcaacttggttt 34697278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 16263587 - 16263528
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttg 62  Q
    |||||| ||| |||||||||  | |||||||||||| ||||||||||| |||||||||||    
T  16263587 cactggccaagcgttgttcctcctggaaatcgaacctggtattccccagatacgtccttg 16263528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 18708630 - 18708705
Alignment:
Q  27 ggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    ||||||||||||| ||||||| ||  || || ||||||||||| || || |||| | |||||||||||||||||||    
T  18708630 ggaaatcgaacccagtattcctcaggtatgttcttggaaggagttccttatcaccgaagtccaaacaacttggttt 18708705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 43959887 - 43959986
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    |||||| ||| |||||||||| | || ||| ||||||| ||||||||   |||||| ||||||||||| | ||| |||||||| |||| |||||| ||||    
T  43959887 cactggccaagcgttgttccccctgggaattgaacccgatattccccgggtacgtcattggaaggagcaccttgccactggagcccaatcaacttagttt 43959986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 46929827 - 46929902
Alignment:
Q  27 ggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    ||||||||||| || ||||| ||| ||||||| ||||||||||||  ||| |||| ||| |||| |||||||||||    
T  46929827 ggaaatcgaactcgatattctccagatacgtctttggaaggagcttcttgccactagagcccaagcaacttggttt 46929902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 14357797 - 14357715
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggag 85  Q
    |||||||||||||||||| | |  |||||||||||| | ||||  ||| ||||||||||||||| | ||| ||| ||||||||    
T  14357797 cactggtcaaacgttgtttcaattggaaatcgaacctgatattttccagatacgtccttggaagaaactccttgccactggag 14357715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 32142924 - 32143005
Alignment:
Q  15 gttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaactt 97  Q
    ||||||||| | | |||||||||||||||||||     ||||||||||||| |||||| ||| ||||| ||||||||||||||    
T  32142924 gttgttccccctgaaaatcgaacccggtattccaggg-tacgtccttggaatgagctctttgccactgaagtccaaacaactt 32143005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 102
Target Start/End: Original strand, 12036860 - 12036909
Alignment:
Q  53 tacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    |||||||||||||||||||  ||| ||| |||| ||||||||||||||||    
T  12036860 tacgtccttggaaggagcttcttgccaccggagcccaaacaacttggttt 12036909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 16956508 - 16956439
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctc 72  Q
    |||||||||||||||||| || | |  || ||||| |||||||||||   ||||||||||||||||||||    
T  16956508 cactggtcaaacgttgttacccctgagaaccgaacacggtattccccgggtacgtccttggaaggagctc 16956439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 17092541 - 17092642
Alignment:
Q  1 cacactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggt 100  Q
    |||||||| ||| ||||||| || | | ||||||||| || |||| ||| ||||||||| || ||||||||  ||| |||| |||| ||| |||||||||    
T  17092541 cacactggccaatcgttgtttcccctgaaaatcgaactcgatatttcccgaatacgtccatgaaaggagcttcttgccactagagttcaagcaacttggt 17092640  T
Q  101 tt 102  Q
    ||    
T  17092641 tt 17092642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 101
Target Start/End: Complemental strand, 28416986 - 28416889
Alignment:
Q  5 ctggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctca-ttgtcactggagtccaaacaacttggtt 101  Q
    |||| |||||||||||||| | |  |||| || |||||||| |||| ||||||||||| || ||| ||| ||| |||| || ||||||||||||||||    
T  28416986 ctggccaaacgttgttccctctgagaatcaaatccggtatttcccatatacgtccttgaaatgagttcatttgccactagaatccaaacaacttggtt 28416889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 91
Target Start/End: Original strand, 45361975 - 45362036
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaa 91  Q
    |||||||||||||||||||    |||||||||||||||||||| ||| ||||| || |||||    
T  45361975 aatcgaacccggtattcccagggtacgtccttggaaggagctccttgccactgaagcccaaa 45362036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 101
Target Start/End: Original strand, 17988775 - 17988823
Alignment:
Q  53 tacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||||| |||||||||||||| |||| |||||||| ||| ||||||    
T  17988775 tacgtccttagaaggagctcattggcactagagtccaagcaatttggtt 17988823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 4e-26; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 3 - 103
Target Start/End: Original strand, 22268094 - 22268194
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    |||||| |||| ||||||||| | || |||||||||||||||||||||| ||||||||||||| |||||| ||| |||||||| ||||||||||||||||    
T  22268094 cactggccaaatgttgttccccctgggaatcgaacccggtattccccaagtacgtccttggaatgagctccttgccactggagcccaaacaacttggttt 22268193  T
Q  103 t 103  Q
    |    
T  22268194 t 22268194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 3 - 102
Target Start/End: Complemental strand, 1605985 - 1605886
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    |||||| ||| |||||||||| | |||||||||||| ||||||| ||   |||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  1605985 cactggccaagcgttgttccccctggaaatcgaaccaggtattctccgggtacgtccttggaaggagctccttgtcattggagtccaaacaacttggttt 1605886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 3 - 106
Target Start/End: Original strand, 43862037 - 43862140
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    |||||| |||||||||||||| | || ||||||||||||||||||||| ||||||| |||||| |||||| ||| | || ||| ||||||||||||||||    
T  43862037 cactggccaaacgttgttccccctgggaatcgaacccggtattccccagatacgtctttggaaagagctccttgccgctagagcccaaacaacttggttt 43862136  T
Q  103 taaa 106  Q
    ||||    
T  43862137 taaa 43862140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 34 - 101
Target Start/End: Original strand, 43346875 - 43346942
Alignment:
Q  34 gaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||||||||||||| ||||||| ||||||||||||| ||| ||||||||||||||||||||||||    
T  43346875 gaacccggtattccccagatacgtctttggaaggagctccttgccactggagtccaaacaacttggtt 43346942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 10047953 - 10048039
Alignment:
Q  15 gttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||||| | || ||||||||||||||||||||  ||||||||||||||||||||| ||| ||||||||| ||| ||||||||||    
T  10047953 gttgttccccctgggaatcgaacccggtattccccggatacgtccttggaaggagctccttgccactggagttcaagcaacttggtt 10048039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 17748447 - 17748545
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||| ||| |||||||||| | || |||||||||||||||||||| |||||||||||||||| ||||  ||| |||| ||| |||||||||||||||    
T  17748447 cactggccaagcgttgttccccctgggaatcgaacccggtattccccgaatacgtccttggaagaagctgcttgccactagagcccaaacaacttggtt 17748545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 36619317 - 36619414
Alignment:
Q  1 cacactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttg 98  Q
    |||||||| |||  ||||||||| | || ||||||||||||||||||||||||||||||||| |||||| || ||| |||| ||||||||| ||||||    
T  36619317 cacactggacaagtgttgttccccctgggaatcgaacccggtattccccaaatacgtccttgcaaggagttccttgccactagagtccaaataacttg 36619414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 10 - 103
Target Start/End: Complemental strand, 37514958 - 37514865
Alignment:
Q  10 caaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtttt 103  Q
    |||||||||||||||| | ||||||||||| |||||||||   || ||||||||||||||||  |||||| || ||||||||||||||||||||    
T  37514958 caaacgttgttcccactgaaaatcgaacccagtattccccgggtatgtccttggaaggagctacttgtcattgaagtccaaacaacttggtttt 37514865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 30 - 106
Target Start/End: Complemental strand, 48804700 - 48804624
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttttaaa 106  Q
    ||||||||||||||||||||  ||||||||||||||||||||| ||| |||||||| |||| |||||||||| ||||    
T  48804700 aatcgaacccggtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaacttggttataaa 48804624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 14650361 - 14650263
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||||||| | |||||||  | |||||||||||||| ||||| ||   |||||||||||||||||||| ||| |||| |||||||||||||||||||    
T  14650361 cactggtcaagcattgttcctcctggaaatcgaacccgatattctccgggtacgtccttggaaggagctccttgccactagagtccaaacaacttggtt 14650263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 43925544 - 43925458
Alignment:
Q  15 gttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||||| | || ||||||||||||||||||||   |||||||||||||||||||| ||| |||||||| |||| ||||||||||    
T  43925544 gttgttccccctgggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagcccaagcaacttggtt 43925458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 4228819 - 4228915
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    |||||| |||||||||||||    |||||||||||| |||||||| |  ||||||||||||||||||||| ||| | |||||| ||||||||||||||||    
T  4228819 cactggccaaacgttgttcct---ggaaatcgaacctggtattcctcggatacgtccttggaaggagctccttgccgctggagcccaaacaacttggttt 4228915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 22974013 - 22973912
Alignment:
Q  1 cacactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggt 100  Q
    |||||||| ||| |||||||||| | |  |||||||||||||||||||| | |||||||||||||||||||| | | || | ||| ||||||||||||||    
T  22974013 cacactggccaagcgttgttccccctgagaatcgaacccggtattccccgagtacgtccttggaaggagctcctcgccattagagcccaaacaacttggt 22973914  T
Q  101 tt 102  Q
    ||    
T  22973913 tt 22973912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 22993430 - 22993531
Alignment:
Q  1 cacactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggt 100  Q
    |||||||| ||| |||||||||  |  | ||||||||||| ||||||||   |||||||||||||||||||| ||| ||||||||||||| |||||||||    
T  22993430 cacactggccaagcgttgttcctcctcggaatcgaacccgatattccccgggtacgtccttggaaggagctccttgccactggagtccaagcaacttggt 22993529  T
Q  101 tt 102  Q
    ||    
T  22993530 tt 22993531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 98
Target Start/End: Complemental strand, 1797504 - 1797409
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttg 98  Q
    |||||| ||| ||||||| || | || |||||||||||||||||| |  ||||||||||||||||||||| ||| |||||||| |||| |||||||    
T  1797504 cactggccaagcgttgtttcccctgggaatcgaacccggtattcctcggatacgtccttggaaggagctccttgccactggagcccaagcaacttg 1797409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 10 - 101
Target Start/End: Original strand, 4195274 - 4195365
Alignment:
Q  10 caaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||| ||||||||  | ||||||||||| |||||||||||  |||||||||||| |||||||| ||| |||||||| |||| ||||||||||    
T  4195274 caaatgttgttcctcctggaaatcgaactcggtattccccggatacgtccttggcaggagctccttgccactggagcccaagcaacttggtt 4195365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 4973202 - 4973273
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||||||| |||||||| |||| ||||||||||| ||||| |||||| ||||| |||||||||||||||    
T  4973202 aatcgaacccgatattccccgaataagtccttggaagaagctccttgtcagtggagcccaaacaacttggtt 4973273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 27028311 - 27028224
Alignment:
Q  15 gttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    ||||||||| | |||||||||||| |||||| ||||  ||||| ||||||| |||||| ||| ||| |||||||||||||||||||||    
T  27028311 gttgttccccctggaaatcgaacctggtatttcccaggtacgttcttggaatgagctccttgccaccggagtccaaacaacttggttt 27028224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 98
Target Start/End: Complemental strand, 29151984 - 29151889
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttg 98  Q
    |||||||||||||||||||   | || |||||||||||||||||| ||  ||||||| || ||||| |||||||||||| ||| ||||||||||||    
T  29151984 cactggtcaaacgttgttcttcctgggaatcgaacccggtattcctcaggtacgtccatgaaaggaactcattgtcactagagcccaaacaacttg 29151889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 42210327 - 42210425
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||| |||||||||||  ||| || ||||||| |||||||||| |  |||||||||||||| |||||| ||| |||||||||| || ||||||||||    
T  42210327 cactggccaaacgttgttttcactgggaatcgaagccggtattcctcggatacgtccttggaaagagctccttgccactggagtctaagcaacttggtt 42210425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 5039510 - 5039583
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtttt 103  Q
    |||||||| ||||||||||| ||||| ||  |||||||||||| ||| |||||||| |||||||||||||||||    
T  5039510 aatcgaactcggtattccccgaatacatctatggaaggagctccttgccactggagcccaaacaacttggtttt 5039583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 34659270 - 34659174
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttgg 99  Q
    |||||||||| ||||||||||   |  ||||||||||||||||||||   ||| ||| |||||||||||| ||| |||||||| |||||||||||||    
T  34659270 cactggtcaagcgttgttccccttgagaatcgaacccggtattccccgggtacatccctggaaggagctccttgccactggagcccaaacaacttgg 34659174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 16802140 - 16802069
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||| ||||||||||||   |||||||||||||||||||||||| |||||||| |||  ||||||||||    
T  16802140 aatcgaatccggtattccccgggtacgtccttggaaggagctcattgccactggagcccaggcaacttggtt 16802069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 21530780 - 21530693
Alignment:
Q  15 gttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    ||||||||| | || |||| ||||| ||||||||||  |||||||||||||||||||| ||| |||||||| | || |||||||||||    
T  21530780 gttgttccccctgggaatcaaacccagtattccccaggtacgtccttggaaggagctccttgccactggagccgaagcaacttggttt 21530693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 27875180 - 27875250
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||| ||||||||||||| ||||||| ||||||||||||  ||| |||||||| |||||||||||||||    
T  27875180 aatcgaatccggtattccccagatacgtc-ttggaaggagctacttgccactggagcccaaacaacttggtt 27875250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 30 - 104
Target Start/End: Original strand, 29805531 - 29805605
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtttta 104  Q
    |||||||| |||||||| || |||||||||||| ||||| ||| ||  |||||||||||||||||||| ||||||    
T  29805531 aatcgaactcggtattctccgaatacgtccttgaaaggatctccttaccactggagtccaaacaacttagtttta 29805605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 42032140 - 42032046
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaactt 97  Q
    |||||| ||||||||||||||   || ||||||||| ||||||||||   |||||||||||||||||||  |||  ||||||| |||||||||||    
T  42032140 cactggccaaacgttgttccccgtgggaatcgaaccaggtattccccgggtacgtccttggaaggagcttcttgctactggagcccaaacaactt 42032046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 47341908 - 47341822
Alignment:
Q  15 gttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||||| | || |||||||| |||||||||||   ||||||||||||| |||||| ||| |||||||| |||| ||||||||||    
T  47341908 gttgttccccctgggaatcgaactcggtattccccgggtacgtccttggaatgagctccttgccactggagcccaagcaacttggtt 47341822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 95
Target Start/End: Complemental strand, 9685756 - 9685691
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaac 95  Q
    ||||||||||| ||||||||  |||||| |||||||||||||| ||| |||||||| |||||||||    
T  9685756 aatcgaacccgatattccccggatacgtgcttggaaggagctccttgccactggagcccaaacaac 9685691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 14 - 98
Target Start/End: Original strand, 5069891 - 5069975
Alignment:
Q  14 cgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttg 98  Q
    |||||||||  | ||||||||||||||||||| |||   ||||||||| |||| ||||| ||| |||||||| ||||||||||||    
T  5069891 cgttgttcctcctggaaatcgaacccggtatttcccgggtacgtccttagaagaagctccttgccactggagcccaaacaacttg 5069975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 11607148 - 11607080
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttg 98  Q
    ||||||| ||| |||||||| ||||||||||||||||||| || ||| |||||||| |||| |||||||    
T  11607148 aatcgaatccgatattccccgaatacgtccttggaaggagttccttgccactggagcccaagcaacttg 11607080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 30 - 102
Target Start/End: Original strand, 19914794 - 19914866
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    |||||||||| |||||||  |  |||||||||||||||||||| ||| |||||||| |||| |||||||||||    
T  19914794 aatcgaacccagtattccttaggtacgtccttggaaggagctccttgccactggagcccaagcaacttggttt 19914866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 30 - 102
Target Start/End: Original strand, 34127712 - 34127784
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    ||||||||||||||||||||   ||||||||||||||||| || ||| || ||||| |||| |||||||||||    
T  34127712 aatcgaacccggtattccccgggtacgtccttggaaggagttccttgccattggagcccaagcaacttggttt 34127784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 45853596 - 45853664
Alignment:
Q  14 cgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactg 82  Q
    ||||||| |||| ||||||||||| ||| |||| |||||||||||||||||||||| || ||| |||||    
T  45853596 cgttgtttccactggaaatcgaactcggcattctccaaatacgtccttggaaggagttccttgccactg 45853664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 13095890 - 13095803
Alignment:
Q  15 gttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    ||||||||| | || ||| ||||||||||||||||   |||||||||| ||||||||| ||| ||| |||| |||| |||||||||||    
T  13095890 gttgttccccctgggaatagaacccggtattccccgggtacgtccttgaaaggagctccttgccacgggagcccaagcaacttggttt 13095803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 53 - 100
Target Start/End: Original strand, 13845331 - 13845378
Alignment:
Q  53 tacgtccttggaaggagctcattgtcactggagtccaaacaacttggt 100  Q
    ||||||||||||||||||||||||||||||||| ||||  ||||||||    
T  13845331 tacgtccttggaaggagctcattgtcactggagcccaagaaacttggt 13845378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 18785686 - 18785615
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||||||||||||||||   |||||||||||||||||||  ||| |||||||| |||  ||||||||||    
T  18785686 aatcgaacccggtattccccgggtacgtccttggaaggagcttcttgccactggagcccatgcaacttggtt 18785615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 98
Target Start/End: Original strand, 24969413 - 24969484
Alignment:
Q  27 ggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttg 98  Q
    |||||||||||||||||||  ||| ||||||||||| ||  ||||| ||| |||||||| ||||||||||||    
T  24969413 ggaaatcgaacccggtattttccagatacgtccttgaaaaaagctccttgccactggagcccaaacaacttg 24969484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 26423352 - 26423450
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||| ||| ||||||| || | || ||||||||||||||||||     ||||||||||||||||| |  ||| |||||||| |||||||||||||||    
T  26423352 cactggccaagcgttgtttcccctgggaatcgaacccggtattccttgggtacgtccttggaaggagtttcttgccactggagcccaaacaacttggtt 26423450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 102
Target Start/End: Original strand, 44961752 - 44961802
Alignment:
Q  52 atacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    ||||||||||| ||||||||| ||||||||| | |||||||||||||||||    
T  44961752 atacgtccttgaaaggagctccttgtcactgaaatccaaacaacttggttt 44961802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 104
Target Start/End: Original strand, 4706057 - 4706150
Alignment:
Q  11 aaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtttta 104  Q
    ||||||||||||| |   ||||||||||  ||||| || | ||||||| ||||||||||||| ||| ||| |||||||||||||| | ||||||    
T  4706057 aaacgttgttccccctaaaaatcgaaccatgtatttcctagatacgtcattggaaggagctccttgccaccggagtccaaacaaccttgtttta 4706150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 8734776 - 8734849
Alignment:
Q  28 gaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||||||| | ||||||| | ||| ||||||||||||||||| ||| |||||  | |||||||||||||||    
T  8734776 gaaatcgaacctgatattcccgagatatgtccttggaaggagctccttgccactgacgcccaaacaacttggtt 8734849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 9814021 - 9813921
Alignment:
Q  1 cacactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggt 100  Q
    |||||||| || |||||||||| || || |||||||||| ||||||||||||||||  ||| ||| ||| |  |||||| ||||| |||| |||||||||    
T  9814021 cacactggccatacgttgttcc-actgggaatcgaacccagtattccccaaatacgatcttagaaagagatgcttgtcaatggagcccaatcaacttggt 9813923  T
Q  101 tt 102  Q
    ||    
T  9813922 tt 9813921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 29 - 102
Target Start/End: Complemental strand, 14537884 - 14537811
Alignment:
Q  29 aaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    ||||||||  ||||||| ||||| || ||| ||||||||||||| ||||| | |||| ||||||||||||||||    
T  14537884 aaatcgaattcggtatttcccaagtatgtcattggaaggagctccttgtcgcgggagcccaaacaacttggttt 14537811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 23658225 - 23658130
Alignment:
Q  1 cacactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaactt 97  Q
    |||||||| ||| |||||||||| | |||||||||||  | |||||||    |||||||||| ||||||||| ||| |||||||| |||||||||||    
T  23658225 cacactggccaagcgttgttccccctggaaatcgaactggatattccctgggtacgtccttg-aaggagctccttgccactggagcccaaacaactt 23658130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 30 - 73
Target Start/End: Original strand, 21190872 - 21190915
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctca 73  Q
    ||||||||||||||||||||  ||| ||||||||||||||||||    
T  21190872 aatcgaacccggtattccccggataagtccttggaaggagctca 21190915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 102
Target Start/End: Complemental strand, 22573856 - 22573758
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    ||||||||||| ||||||||| | | |||||||||||| |||||||| ||||  || ||||||| ||||  |||  ||||||| |||| |||||||||||    
T  22573856 cactggtcaaatgttgttccc-ctgaaaatcgaacccgatattcccccaatatatctttggaagaagcttcttgctactggagcccaagcaacttggttt 22573758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 62
Target Start/End: Original strand, 48244446 - 48244480
Alignment:
Q  28 gaaatcgaacccggtattccccaaatacgtccttg 62  Q
    ||||| |||||||||||||||||||||||||||||    
T  48244446 gaaattgaacccggtattccccaaatacgtccttg 48244480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 99
Target Start/End: Original strand, 20247262 - 20247330
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttgg 99  Q
    ||||||||| ||||||||| || ||| |||||||||||||||  ||| |||| || ||||||||||||||    
T  20247262 aatcgaacctggtattccc-aagtacatccttggaaggagcttcttgccactagattccaaacaacttgg 20247330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 102
Target Start/End: Complemental strand, 39474957 - 39474884
Alignment:
Q  30 aatcgaacccggtattccccaa-atacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    ||||||||||||||| ||||   ||||||| |||||| |||||| ||  |||| ||||||||||||||||||||    
T  39474957 aatcgaacccggtatacccccggatacgtctttggaaagagctccttaccactagagtccaaacaacttggttt 39474884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 101
Target Start/End: Original strand, 25197232 - 25197280
Alignment:
Q  53 tacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||| ||| ||||||| |  ||||||||||||||||||||||||||||    
T  25197232 tacgttcttagaaggagatttttgtcactggagtccaaacaacttggtt 25197280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 102
Target Start/End: Complemental strand, 9889 - 9790
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    |||||| ||| |||||||||| | |||||||||| |||||||||| || |||| |||||||||||||||| |||||||||||||| ||||||||||||||    
T  9889 cactggccaagcgttgttccccctggaaatcgaatccggtattcctcagatacatccttggaaggagctccttgtcactggagtcaaaacaacttggttt 9790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 2e-25; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 14107423 - 14107522
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    |||||||||| |||||||||  | || |||||||||||||||||||| |||||||| ||||||||||||| ||| |||||||| ||||||||||||||||    
T  14107423 cactggtcaagcgttgttcctcctgggaatcgaacccggtattccccgaatacgtctttggaaggagctccttgccactggagcccaaacaacttggttt 14107522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 8612037 - 8612138
Alignment:
Q  1 cacactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggt 100  Q
    |||||||||||| |||||||||  |  | ||||||||||||||||||||   |||||||||||||||||||| ||| |||||||||||||||||||||||    
T  8612037 cacactggtcaagcgttgttcctcctcggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagtccaaacaacttggt 8612136  T
Q  101 tt 102  Q
    ||    
T  8612137 tt 8612138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 29333204 - 29333301
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||| |||||||||||||| | ||||||||||||||||||||||    |||||||||||||||||||||||| |||| ||| |||||||||||||||    
T  29333204 cactggccaaacgttgttccc-ctggaaatcgaacccggtattccctgggtacgtccttggaaggagctcattgccactagagcccaaacaacttggtt 29333301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 30 - 102
Target Start/End: Original strand, 2271393 - 2271465
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||| |||||||| |||| |||||||||||    
T  2271393 aatcgaacccggtattccccgaatacgtccttggaaggagctccttgccactggagcccaagcaacttggttt 2271465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 3030694 - 3030781
Alignment:
Q  14 cgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||||||| | || ||||||||||| ||||||| |||||||||||||||| |||||| ||| |||||||| |||||||||||||||    
T  3030694 cgttgttccccctgggaatcgaacccgatattcccgaaatacgtccttggaatgagctccttgccactggagcccaaacaacttggtt 3030781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 21898693 - 21898595
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||| ||| |||||||||  | || ||||||||||||||||||||  ||||||||||||||||||||| ||| |||||||| |||| ||||||||||    
T  21898693 cactggccaagcgttgttcctcctgggaatcgaacccggtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaacttggtt 21898595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 24671929 - 24672030
Alignment:
Q  1 cacactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggt 100  Q
    ||||||||||||  ||||||||| | || ||| ||||||||||||| ||| ||||||||||| ||||||||| ||| |||||||| |||| |||||||||    
T  24671929 cacactggtcaagtgttgttccctctgggaatagaacccggtattctccagatacgtccttgaaaggagctccttgccactggagcccaagcaacttggt 24672028  T
Q  101 tt 102  Q
    ||    
T  24672029 tt 24672030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 103
Target Start/End: Original strand, 9179802 - 9179901
Alignment:
Q  4 actggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtttt 103  Q
    |||||||||  ||||||||| | || |||||||||||||||||||    ||||||||||||| |||||| ||| |||||||| |||||||||||||||||    
T  9179802 actggtcaagtgttgttccccctgggaatcgaacccggtattccctgggtacgtccttggaatgagctccttgccactggagcccaaacaacttggtttt 9179901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 98
Target Start/End: Original strand, 13036081 - 13036164
Alignment:
Q  15 gttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttg 98  Q
    ||||||||| | | |||||||||||| |||||||| |||||||||||||||||||||| ||| |||||||| |||| |||||||    
T  13036081 gttgttccccctgaaaatcgaacccgatattccccgaatacgtccttggaaggagctccttgccactggagcccaagcaacttg 13036164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 5253300 - 5253386
Alignment:
Q  15 gttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||||| | || ||||||||||||||||||||   |||||||||||||||||||| ||| || ||||| |||| ||||||||||    
T  5253300 gttgttccccctgggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccattggagcccaagcaacttggtt 5253386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 8932694 - 8932608
Alignment:
Q  15 gttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||||| | || ||||||||||| ||||||||  |||| |||||||||||| ||| ||| ||||||||| ||||||||||||||    
T  8932694 gttgttccccctgggaatcgaacccgatattccccggatacatccttggaaggaactccttgccactggagttcaaacaacttggtt 8932608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 8938756 - 8938658
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||||||  ||||||||  | || |||||||||  |||||||||  ||| ||| ||||||||||||| |||||||||||| |||||||||||||||    
T  8938756 cactggtcaagtgttgttcctcctgggaatcgaaccaagtattccccggatatgtctttggaaggagctccttgtcactggagcccaaacaacttggtt 8938658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 8944160 - 8944074
Alignment:
Q  15 gttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||||| | || ||||||||||| ||||||||  |||| |||||||||||| ||| ||| ||||||||| ||||||||||||||    
T  8944160 gttgttccccctgggaatcgaacccgatattccccggatacatccttggaaggaactccttgccactggagttcaaacaacttggtt 8944074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 3 - 76
Target Start/End: Complemental strand, 12606475 - 12606402
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattg 76  Q
    |||||| |||||||||||||| | |||||||||| | ||||||||||  |||||| ||||||||||||||||||    
T  12606475 cactggccaaacgttgttccccctggaaatcgaatctggtattccccggatacgttcttggaaggagctcattg 12606402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 30 - 102
Target Start/End: Original strand, 6606189 - 6606261
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    ||||||||||||||||||||  ||||||||||||||||||||| ||| |||||  | |||| |||||||||||    
T  6606189 aatcgaacccggtattccccggatacgtccttggaaggagctccttgccactgtggcccaagcaacttggttt 6606261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 3 - 103
Target Start/End: Complemental strand, 9147346 - 9147246
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    ||||||||||  || |||||| | || ||||||||||| |||||||||  ||||||||||||| |||||| ||  |||||||| |||||||||||| |||    
T  9147346 cactggtcaagtgtcgttccccctgggaatcgaacccgatattccccaggtacgtccttggaatgagctccttcccactggagcccaaacaacttgattt 9147247  T
Q  103 t 103  Q
    |    
T  9147246 t 9147246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 29 - 101
Target Start/End: Original strand, 19230649 - 19230720
Alignment:
Q  29 aaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||||| ||||||||||| |  |||||||||||||||||||| ||| |||||||| |||||||||||||||    
T  19230649 aaatcgaatccggtattcccgag-tacgtccttggaaggagctccttgccactggagcccaaacaacttggtt 19230720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 21016843 - 21016914
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||||||||||||||||   ||||||| |||||||||||| ||| |||||||| |||| ||||||||||    
T  21016843 aatcgaacccggtattccccgggtacgtccctggaaggagctccttgccactggagcccaagcaacttggtt 21016914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 94
Target Start/End: Original strand, 34954684 - 34954774
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaa 94  Q
    |||||| |||||||||||||| | |  ||||||||| |||||||||||  |||||||||||||||||||| ||| || ||||| ||||||||    
T  34954684 cactggccaaacgttgttccccctgagaatcgaacctggtattccccaggtacgtccttggaaggagctccttgcca-tggagcccaaacaa 34954774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 9366514 - 9366575
Alignment:
Q  29 aaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaa 90  Q
    |||||||||| | |||||||||| ||| |||||||||||||||| |||||||||||| ||||    
T  9366514 aaatcgaacctgatattccccaagtacatccttggaaggagctccttgtcactggagcccaa 9366575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 30 - 102
Target Start/End: Original strand, 15643921 - 15643992
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    ||||||||||| ||||||| | |||||||||||||| |||||| ||| |||||||| |||| |||||||||||    
T  15643921 aatcgaacccgttattccc-agatacgtccttggaatgagctccttgccactggagcccaagcaacttggttt 15643992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 31 - 102
Target Start/End: Original strand, 10311562 - 10311633
Alignment:
Q  31 atcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    |||||||||||||||||||  |||||| |||||||||||||| |||  ||||||| |||| |||| ||||||    
T  10311562 atcgaacccggtattccccggatacgttcttggaaggagctccttgctactggagcccaagcaacatggttt 10311633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 4596171 - 4596109
Alignment:
Q  10 caaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctc 72  Q
    |||||||||||||| | | |||||||||| | |||||||| |||||||||||| |||||||||    
T  4596171 caaacgttgttccccctgaaaatcgaacctgatattccccgaatacgtccttgaaaggagctc 4596109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 29444830 - 29444928
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||| ||| |||||||||| |  ||||||||||||||||| ||||   |||||| ||||||||||||| ||| |||| ||| ||||  |||||||||    
T  29444830 cactggccaagcgttgttccccctagaaatcgaacccggtatcccccgggtacgtctttggaaggagctccttgccactagagcccaagtaacttggtt 29444928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 32048498 - 32048402
Alignment:
Q  1 cacactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaactt 97  Q
    |||||||  |||||||||||| | | | |||||||| | | |||||| | | ||| |||||||||||||||| ||  ||||||||||||||||||||    
T  32048498 cacactgaccaaacgttgttctccctgaaaatcgaatctgatattcctcgagtacatccttggaaggagctccttaccactggagtccaaacaactt 32048402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 98
Target Start/End: Complemental strand, 3601129 - 3601034
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttg 98  Q
    |||||| ||| |||||||||| | |  ||||||| |||||||||||| |||||||  |||||| |||||| ||| |||| ||| |||| |||||||    
T  3601129 cactggccaagcgttgttccccctgagaatcgaaaccggtattccccgaatacgtatttggaaagagctctttgccactagagcccaagcaacttg 3601034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 34 - 101
Target Start/End: Complemental strand, 13468947 - 13468880
Alignment:
Q  34 gaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||| ||||||||||  ||||||||||||||||||||| ||| |||  ||| |||| ||||||||||    
T  13468947 gaacctggtattccccggatacgtccttggaaggagctccttgccaccagagcccaagcaacttggtt 13468880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 30 - 97
Target Start/End: Original strand, 30788943 - 30789010
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaactt 97  Q
    |||| |||||| ||||||||  |||| |||||||||||||||| ||| |||||| |||||| ||||||    
T  30788943 aatcaaacccgatattccccggatacatccttggaaggagctccttgccactggggtccaagcaactt 30789010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 11142648 - 11142554
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaactt 97  Q
    |||||||||||||||||| |||| |  |||||||| ||||||| |||   || |||||||||| |||||  |||||||||  | |||||||||||    
T  11142648 cactggtcaaacgttgtttccactgcgaatcgaactcggtatttcccgggtatgtccttggaatgagcttcttgtcactgaggcccaaacaactt 11142554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 102
Target Start/End: Complemental strand, 5759623 - 5759574
Alignment:
Q  53 tacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    ||||||||||||||||| || ||| |||||||| |||| |||||||||||    
T  5759623 tacgtccttggaaggagttccttgccactggagcccaagcaacttggttt 5759574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 7e-25; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 8141147 - 8141049
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||| ||| ||||||| || | ||||||||||||||||||||||| |||||||||||||||| ||||| ||| |||||||| |||||||||||||||    
T  8141147 cactggccaagcgttgtttcccctggaaatcgaacccggtattccccgaatacgtccttggaagcagctccttgccactggagcccaaacaacttggtt 8141049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 2467195 - 2467282
Alignment:
Q  15 gttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    ||||||||| | |||||||||||||||||||||||  ||||||||||||||||||||| ||| |||||||| |||| |||||||||||    
T  2467195 gttgttccccctggaaatcgaacccggtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaacttggttt 2467282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 29 - 102
Target Start/End: Original strand, 3418604 - 3418677
Alignment:
Q  29 aaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    |||||||||||| ||||||||| ||||||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  3418604 aaatcgaacccgatattccccagatacgtccttggaaggagctccttgccacgggagtccaaacaacttggttt 3418677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 33401862 - 33401958
Alignment:
Q  1 cacactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaactt 97  Q
    ||||||||||||  ||||||||| | | ||||||||||||||||||||| | |||||||||| ||||||||| ||| |||||||| |||||||||||    
T  33401862 cacactggtcaagtgttgttccccctgaaaatcgaacccggtattccccgagtacgtccttgaaaggagctccttgccactggagcccaaacaactt 33401958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 38922479 - 38922577
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||| ||| |||||||||| | || ||||||||||||||||||||   |||||||||||||||||||| ||| |||||||| |||| ||||||||||    
T  38922479 cactggccaagcgttgttccctctgggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagcccaagcaacttggtt 38922577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 13085571 - 13085471
Alignment:
Q  1 cacactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggt 100  Q
    ||||||||  ||||||||||||| | |  ||||||||||||||||||||  ||||||||||||||||||||| | | |||||||| |||||||| |||||    
T  13085571 cacactggctaaacgttgttccctctgagaatcgaacccggtattccccggatacgtccttggaaggagctcctcgccactggagcccaaacaagttggt 13085472  T
Q  101 t 101  Q
    |    
T  13085471 t 13085471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 44893341 - 44893441
Alignment:
Q  1 cacactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggt 100  Q
    |||||||| ||| | |||||||| |  ||||| ||||||||||||||||   |||||||||||||||||||| ||| |||||||| ||||||||||||||    
T  44893341 cacactggccaagcattgttccccctagaaattgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagcccaaacaacttggt 44893440  T
Q  101 t 101  Q
    |    
T  44893441 t 44893441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 43027323 - 43027252
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||||||| ||||||||||||||||| |||| || |||||||||| |||||||| |||||||||||||||    
T  43027323 aatcgaacccagtattccccaaatacgttcttgaaatgagctcattgccactggagcccaaacaacttggtt 43027252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 6100517 - 6100419
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||| ||| |||||||||  | || ||||||||||||||||||||  ||||||||||| ||||||||| ||| ||||| || |||||||||||||||    
T  6100517 cactggccaagcgttgttcctcctgggaatcgaacccggtattccccggatacgtccttgaaaggagctccttgccactgaagcccaaacaacttggtt 6100419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 4 - 101
Target Start/End: Original strand, 1013043 - 1013140
Alignment:
Q  4 actggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||| ||| |||||||||| | || ||||||||||||||||||||  ||||||||||||||  ||||| ||| |||||||| |||| ||||||||||    
T  1013043 actggccaagcgttgttccccctgggaatcgaacccggtattccccggatacgtccttggaaaaagctccttgccactggagcccaagcaacttggtt 1013140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 9860058 - 9860159
Alignment:
Q  1 cacactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaa-atacgtccttggaaggagctcattgtcactggagtccaaacaacttgg 99  Q
    |||||||| |||  ||||||||| | || ||||||||||||||||||||   ||||||||||||||||||||| ||| |||||||  |||||||||||||    
T  9860058 cacactggccaagtgttgttccccctgggaatcgaacccggtattcccccggatacgtccttggaaggagctctttgccactggatcccaaacaacttgg 9860157  T
Q  100 tt 101  Q
    ||    
T  9860158 tt 9860159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 30 - 102
Target Start/End: Original strand, 15884647 - 15884719
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    |||||||||||||||||||||  |||||||||||||||||||| ||  |||||||| |||| |||||||||||    
T  15884647 aatcgaacccggtattccccaggtacgtccttggaaggagctccttaccactggagcccaatcaacttggttt 15884719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 14666163 - 14666234
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||||||||||||||||  |||||||||||||| |||||| ||| |||||||| |||| ||||||||||    
T  14666163 aatcgaacccggtattccccggatacgtccttggaatgagctccttgccactggagcccaagcaacttggtt 14666234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 102
Target Start/End: Original strand, 9395908 - 9395982
Alignment:
Q  28 gaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    ||||||||| ||| ||||||||| |||| |||||| || |||||||||| ||||||||||||| |||||||||||    
T  9395908 gaaatcgaatccgatattccccagatacatccttgaaatgagctcattgccactggagtccaagcaacttggttt 9395982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 10535469 - 10535566
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||||||| || ||||||| | | |||| |||||  ||||||| |  ||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  10535469 cactggtcaagcggtgttccc-ctgaaaattgaaccatgtattcctcggatacgtccttggaaggagctccttgccactggagtccaaacaacttggtt 10535566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 8997636 - 8997709
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtttt 103  Q
    |||||||| ||||||||||| |||| ||||||| |||||| || ||| ||||||||||||| ||||||||||||    
T  8997636 aatcgaacacggtattccccgaatatgtccttgaaaggagttccttgccactggagtccaagcaacttggtttt 8997709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 17981488 - 17981387
Alignment:
Q  1 cacactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggt 100  Q
    ||||||||||||  ||||||||| | || |||||||||||||||| |||   ||| |||||||||||||||| ||| |||||||| |||| |||||| ||    
T  17981488 cacactggtcaagagttgttccccctgggaatcgaacccggtatttcccgggtacatccttggaaggagctccttgccactggagcccaagcaacttagt 17981389  T
Q  101 tt 102  Q
    ||    
T  17981388 tt 17981387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 41 - 101
Target Start/End: Complemental strand, 17845740 - 17845680
Alignment:
Q  41 gtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||||| | ||| |||||||||||||||||||| |||||||| |||||||||||||||    
T  17845740 gtattccccgagtacatccttggaaggagctcattgccactggagcccaaacaacttggtt 17845680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 2 - 102
Target Start/End: Complemental strand, 24837288 - 24837188
Alignment:
Q  2 acactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||| ||| |||||||| | | || |||||||| |||||||||||   ||||| |||||||||||||| ||| |||||||| |||| ||||||||||    
T  24837288 acactggccaagcgttgttctccctgggaatcgaacacggtattccccgggtacgtacttggaaggagctccttgccactggagcccaagcaacttggtt 24837189  T
Q  102 t 102  Q
    |    
T  24837188 t 24837188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 101
Target Start/End: Original strand, 34613844 - 34613941
Alignment:
Q  4 actggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||| || ||||||||||  | || ||||||||||| ||||||||  |||||   ||||||||||||||||| |||||||| |||||||| ||||||    
T  34613844 actggccagacgttgttcctcctgggaatcgaacccgatattccccggatacggttttggaaggagctcattgccactggagcccaaacaatttggtt 34613941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 583832 - 583761
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||||||||||||| | | | |||||||||||||| ||||| ||| |||| ||| |||||||||||||||    
T  583832 aatcgaacccggtatttctcgagtacgtccttggaagtagctccttgccactagagcccaaacaacttggtt 583761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 42 - 101
Target Start/End: Original strand, 7673758 - 7673816
Alignment:
Q  42 tattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||||| ||||||||||||||||||||| ||| |||||||| |||| ||||||||||    
T  7673758 tattccccagatacgtccttggaaggagctccttgccactggag-ccaagcaacttggtt 7673816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 14846594 - 14846523
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||||||||||||||||   ||||||||| |||||||||  ||| || ||||| |||||||||||||||    
T  14846594 aatcgaacccggtattccccgggtacgtccttagaaggagcttcttgccagtggagcccaaacaacttggtt 14846523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 22810098 - 22810027
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||||||| | ||| ||  ||||||||||||||||||||| ||| |||| ||| |||||||||||||||    
T  22810098 aatcgaacccgatgttctccggatacgtccttggaaggagctccttgccactagagcccaaacaacttggtt 22810027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 101
Target Start/End: Complemental strand, 29933818 - 29933720
Alignment:
Q  2 acactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||||||||  ||||||| | | || ||||||||||| ||||| ||  |||| | ||| |||||||||| ||| ||||||||||||||||||||||||    
T  29933818 acactggtcaagtgttgttctccctgggaatcgaacccg-tattctccggatacattcttagaaggagctccttgccactggagtccaaacaacttggtt 29933720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 34846831 - 34846761
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||||||||||||||||    ||||||||||||| |||||| ||| |||||||| |||||||||||||||    
T  34846831 aatcgaacccggtattcccggg-tacgtccttggaatgagctccttgccactggagcccaaacaacttggtt 34846761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 24938652 - 24938725
Alignment:
Q  28 gaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||||||| ||||||| ||   || ||||||||| ||||||| ||| |||||||| |||||||||||||||    
T  24938652 gaaatcgaacctggtattctccgggtatgtccttggagggagctccttgccactggagcccaaacaacttggtt 24938725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 29 - 102
Target Start/End: Complemental strand, 30903355 - 30903282
Alignment:
Q  29 aaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    |||||||| |||||||||||| |||||||| ||||||| ||||| ||   |||||||  |||||||||||||||    
T  30903355 aaatcgaatccggtattccccgaatacgtcattggaagaagctccttactactggagcgcaaacaacttggttt 30903282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 102
Target Start/End: Complemental strand, 2964094 - 2964022
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    |||||||| |||||||||||   ||||| |||||||||||||  ||| |||| |||||||| |||||||||||    
T  2964094 aatcgaacacggtattccccgggtacgttcttggaaggagctacttgccactagagtccaagcaacttggttt 2964022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 102
Target Start/End: Complemental strand, 6940592 - 6940504
Alignment:
Q  14 cgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    |||||||||  | |||||||||||||| ||||  ||  |||| ||||||||| |||||| ||  |||||||| ||||||||||||||||    
T  6940592 cgttgttccacctggaaatcgaacccgatattttccggatacctccttggaatgagctccttaccactggagcccaaacaacttggttt 6940504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 10927624 - 10927553
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||||||||||||||||   |||||||||| ||| ||||| ||| ||||| || |||| ||||||||||    
T  10927624 aatcgaacccggtattccccgggtacgtccttgaaagaagctccttgccactgaagcccaagcaacttggtt 10927553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 97
Target Start/End: Original strand, 44031504 - 44031599
Alignment:
Q  2 acactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaactt 97  Q
    ||||||| ||| |||||||||| | |||||||||||||| |||| |||   ||| ||||||||||||| || ||| |||| |||  ||||||||||    
T  44031504 acactggccaagcgttgttccccctggaaatcgaacccgatatttcccggttacatccttggaaggagttccttgccactagagctcaaacaactt 44031599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 45521187 - 45521116
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||||||||||||||||   ||| ||||||||| || ||| ||| |||||||| |||| ||||||||||    
T  45521187 aatcgaacccggtattccccgggtacatccttggaatgaactccttgccactggagcccaagcaacttggtt 45521116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 98
Target Start/End: Original strand, 68164 - 68258
Alignment:
Q  4 actggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttg 98  Q
    ||||| |||||||||||||  | |  ||||||||||| | |||||| |  ||||||||||||||||||| ||| ||| ||||  |||||||||||    
T  68164 actggccaaacgttgttcctcctgagaatcgaacccgatcttccccgagcacgtccttggaaggagctccttgccaccggagctcaaacaacttg 68258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 102
Target Start/End: Complemental strand, 16893955 - 16893883
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    ||||||||||| ||||||||  ||||||| |||||||||| || ||| ||||  || |||| |||||||||||    
T  16893955 aatcgaacccgatattccccggatacgtcattggaaggagttccttgccactatagcccaagcaacttggttt 16893883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 101
Target Start/End: Original strand, 34723726 - 34723786
Alignment:
Q  41 gtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||| ||| |||| ||| ||||||||||||||||| ||| ||||  ||||||||||||||    
T  34723726 gtatttcccgaatatgtctttggaaggagctcattgccaccggagctcaaacaacttggtt 34723786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 7e-25; HSPs: 59)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 12864253 - 12864167
Alignment:
Q  15 gttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||||| | |||||||||| |||||||||||| |||||||| ||||||||||||| |||||||||||| |||||||||||||||    
T  12864253 gttgttccccctggaaatcgaatccggtattccccgaatacgtcattggaaggagctccttgtcactggagcccaaacaacttggtt 12864167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 18902595 - 18902693
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||||||| ||||||||||   || |||||||||||||||||||| | |||||||||||||||||||| ||| |||||||| |||| ||||||||||    
T  18902595 cactggtcaagcgttgttccccgtgggaatcgaacccggtattccccgagtacgtccttggaaggagctccttgccactggagcccaagcaacttggtt 18902693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 34356235 - 34356149
Alignment:
Q  15 gttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||||| | |||||||||||||||||||||||| ||||||||||||||  ||||| ||| |||||||| |||||||||||||||    
T  34356235 gttgttccccctggaaatcgaacccggtattccccagatacgtccttggaaatagctccttgccactggagcccaaacaacttggtt 34356149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 7747317 - 7747217
Alignment:
Q  1 cacactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggt 100  Q
    |||||||| |||||||||||||  |  | ||||||||||||||||||||  ||||||||||||||||||||| ||| |||||||| |||| |||||||||    
T  7747317 cacactggccaaacgttgttcctcctaggaatcgaacccggtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaacttggt 7747218  T
Q  101 t 101  Q
    |    
T  7747217 t 7747217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 14169674 - 14169772
Alignment:
Q  3 cactggtcaaacgttgttcccaccgga-aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||||||  ||||||||| ||||| ||||||||||| |||||||| ||||||||||||||| || ||| |||||||||||| |||||||||||||||    
T  14169674 cactggtcaagtgttgttccc-ccggagaatcgaacccgatattccccgaatacgtccttggaaagatctccttgtcactggagcccaaacaacttggtt 14169772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 2528404 - 2528505
Alignment:
Q  1 cacactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggt 100  Q
    |||||||  ||| |||||||||| | || ||||||||||||| |||| | | |||||||||||||||||||||||| |||||||| |||||||| |||||    
T  2528404 cacactgaccaagcgttgttccccctgggaatcgaacccggtgttcctcgagtacgtccttggaaggagctcattgccactggagcccaaacaatttggt 2528503  T
Q  101 tt 102  Q
    ||    
T  2528504 tt 2528505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 98
Target Start/End: Complemental strand, 21286485 - 21286390
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttg 98  Q
    |||||||||| ||||||| |  | || ||||||||||||||||||||  ||||||||||||||||||||| ||| ||||||||  |||||||||||    
T  21286485 cactggtcaagcgttgtttcgcctgggaatcgaacccggtattccccggatacgtccttggaaggagctccttgccactggagctcaaacaacttg 21286390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 331530 - 331444
Alignment:
Q  15 gttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||||| | || ||||||||||||||||||||   ||||||||||||| |||||||||| |||||||| |||| ||||||||||    
T  331530 gttgttccccctgggaatcgaacccggtattccccgggtacgtccttggaaagagctcattgccactggagcccaagcaacttggtt 331444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 38005443 - 38005345
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||| ||| ||||||||||   || |||||||||| |||||||||   |||||||||||||||||||| ||| |||||||| |||||||||||||||    
T  38005443 cactggccaagcgttgttccccttgggaatcgaacccagtattccccgggtacgtccttggaaggagctccttgccactggagcccaaacaacttggtt 38005345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 38962804 - 38962706
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||| ||| |||||||||  | | |||||||||||||||||||||  ||||||||||| || |||||| ||  ||||||||||||||||||||||||    
T  38962804 cactggccaagcgttgttcctcctgaaaatcgaacccggtattccccggatacgtccttgaaatgagctccttaccactggagtccaaacaacttggtt 38962706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 15079526 - 15079426
Alignment:
Q  1 cacactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggt 100  Q
    |||||||||||| |||||||||| | ||||||||||||| |||||||||   ||||||||||||||| | || ||| ||| |||| |||| |||||||||    
T  15079526 cacactggtcaagcgttgttccccctggaaatcgaaccctgtattccccgggtacgtccttggaaggtgttccttgccaccggagcccaagcaacttggt 15079427  T
Q  101 t 101  Q
    |    
T  15079426 t 15079426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 44193522 - 44193422
Alignment:
Q  1 cacactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggt 100  Q
    ||||| |||||| |||||||||| |   |||||||||| |||||||| |  ||||||| |||||| |||||||||| ||||||||||||| |||||||||    
T  44193522 cacacgggtcaagcgttgttccccctaaaaatcgaacctggtattcctcggatacgtcattggaaagagctcattgccactggagtccaagcaacttggt 44193423  T
Q  101 t 101  Q
    |    
T  44193422 t 44193422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 42 - 101
Target Start/End: Original strand, 3598856 - 3598915
Alignment:
Q  42 tattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||||| ||||||||||||||||||||||||||||| ||||| || ||||||||||||    
T  3598856 tattccccgaatacgtccttggaaggagctcattgtcagtggagccccaacaacttggtt 3598915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 10 - 101
Target Start/End: Original strand, 19976879 - 19976970
Alignment:
Q  10 caaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||||| ||||| | | |||||||||||||||||||||  |||||||||||||| |||||  ||| |||||||| |||||||| ||||||    
T  19976879 caaacgttattccccctgaaaatcgaacccggtattccccggatacgtccttggaaagagctacttgccactggagcccaaacaatttggtt 19976970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 20612628 - 20612699
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||||||||||||||||| |||||  ||||||||||||||| ||| |||||||| |||| ||||||||||    
T  20612628 aatcgaacccggtattccccgaatacaaccttggaaggagctccttgccactggagcccaagcaacttggtt 20612699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 29422244 - 29422157
Alignment:
Q  15 gttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    ||||||||| | ||||||||||||| |||||||||   |||||||||| ||||||||| |||  ||||||| ||||||||||||||||    
T  29422244 gttgttccctctggaaatcgaacccagtattccccgggtacgtccttgaaaggagctccttgctactggagcccaaacaacttggttt 29422157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 10026681 - 10026779
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||| |||||||||||||| | |  ||||||||||||||||  || | |||||||||||||||||||| ||| || ||||| |||| ||||||||||    
T  10026681 cactggccaaacgttgttccccctgagaatcgaacccggtattttccgagtacgtccttggaaggagctccttgccattggagcccaagcaacttggtt 10026779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 16034980 - 16034883
Alignment:
Q  1 cacactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttg 98  Q
    |||||||||||| |||||||||  | | ||||||||||||||||||| |  |||||||||||||||||| || ||  ||||| ||||||| |||||||    
T  16034980 cacactggtcaagcgttgttccgcctgaaaatcgaacccggtattcctcggatacgtccttggaaggagttccttaccactgaagtccaagcaacttg 16034883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 30 - 91
Target Start/End: Complemental strand, 25549742 - 25549681
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaa 91  Q
    |||||||||| ||||||||||||||||| |||||||||||||| ||| |||||||| |||||    
T  25549742 aatcgaacccagtattccccaaatacgtacttggaaggagctccttgccactggagcccaaa 25549681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 2550882 - 2550811
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||||||| ||||||||  ||||||||||| ||||||||| ||| |||||||| |||| ||||||||||    
T  2550882 aatcgaacccgatattccccggatacgtccttgtaaggagctccttgccactggagcccaagcaacttggtt 2550811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 28 - 102
Target Start/End: Original strand, 3643977 - 3644051
Alignment:
Q  28 gaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    |||||| |||||||||||||||  |||||||||||||| |||||| ||  |||||||| |||| |||||||||||    
T  3643977 gaaatcaaacccggtattccccggatacgtccttggaatgagctcctttccactggagcccaagcaacttggttt 3644051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 8410160 - 8410074
Alignment:
Q  15 gttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||||| | || ||||||||||| ||||| ||   |||||||||||||||||||| ||| |||||||| |||| ||||||||||    
T  8410160 gttgttccccctgggaatcgaacccgatattctccgggtacgtccttggaaggagctccttgccactggagcccaagcaacttggtt 8410074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 14853432 - 14853530
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||| |||| ||||||||| | | |||||||| | ||||||||||  |||| |||||| |||||| || ||| |||||||| |||||||||||||||    
T  14853432 cactggccaaaagttgttccccctgaaaatcgaatctggtattccccggatacatccttgaaaggagttccttgccactggagcccaaacaacttggtt 14853530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 25540469 - 25540551
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggag 85  Q
    |||||| ||| |||||||||| |  | |||||||||| |||||||||| |||||||||||||| |||||| ||| ||||||||    
T  25540469 cactggccaagcgttgttccccctaggaatcgaacccagtattccccagatacgtccttggaatgagctccttgccactggag 25540551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 42770716 - 42770814
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||| ||| |||||||||| | |  ||| |||||||||||| | |  ||||||||||||||||||||| ||| |||||||| |||| ||||||||||    
T  42770716 cactggccaagcgttgttccccctgagaattgaacccggtatttctcggatacgtccttggaaggagctctttgccactggagcccaagcaacttggtt 42770814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 44139525 - 44139427
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||| ||| |||||||||| | || ||||||||||||||||||||| || | ||||||||||||| || |   |||||||| |||| ||||||||||    
T  44139525 cactggccaagcgttgttccccctgggaatcgaacccggtattccccagatgcatccttggaaggagttcctcaccactggagcccaagcaacttggtt 44139427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 101
Target Start/End: Complemental strand, 22593167 - 22593078
Alignment:
Q  12 aacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||||||||| | || |||||||| | |||||||||   |||||||||||||||||||| ||| ||||||||  ||| ||||||||||    
T  22593167 aacgttgttccccctgggaatcgaactcagtattccccgggtacgtccttggaaggagctccttgccactggagcacaagcaacttggtt 22593078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 84
Target Start/End: Complemental strand, 41220676 - 41220595
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactgga 84  Q
    |||||| ||| |||||||||  | || ||||||||||||||||||||   |||||||||||||||||||| ||| |||||||    
T  41220676 cactggccaagcgttgttcctcctgggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactgga 41220595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 30 - 102
Target Start/End: Original strand, 13026503 - 13026575
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    ||||||||||| |||||||   |||||||||||||||||| || ||| ||||||||| ||| |||||||||||    
T  13026503 aatcgaacccgatattccctggatacgtccttggaaggagttccttgccactggagttcaatcaacttggttt 13026575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 53 - 101
Target Start/End: Original strand, 21180429 - 21180477
Alignment:
Q  53 tacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||||||||||||||||| ||| |||||||| |||||||||||||||    
T  21180429 tacgtccttggaaggagctccttgccactggagcccaaacaacttggtt 21180477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 3 - 103
Target Start/End: Original strand, 45263732 - 45263832
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    |||||| ||| |||||||||| | || ||||||||||||||||||||  |||  |  ||| ||||||||| ||| |||||||| |||||||||||| |||    
T  45263732 cactggccaagcgttgttccctctgggaatcgaacccggtattccccggataaatttttgaaaggagctccttgccactggagcccaaacaacttgattt 45263831  T
Q  103 t 103  Q
    |    
T  45263832 t 45263832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 2149259 - 2149358
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaac-ccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||| |||||||| ||||| | |  |||||||| ||||||||||||| |||| |||||| ||| || || ||| |||||||| |||||||||||||||    
T  2149259 cactggccaaacgttattcccccagtgaatcgaactccggtattccccagatacatccttgaaagaagttccttgccactggagcccaaacaacttggtt 2149358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 10046568 - 10046639
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||||||||||||| ||  |||||| |||||||||||||| ||| || ||||| |||| ||||||||||    
T  10046568 aatcgaacccggtattctccggatacgttcttggaaggagctccttgccattggagcccaagcaacttggtt 10046639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 23500774 - 23500844
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||||||| |||||||| | |||||| ||||||||||||| ||| ||| |||| |||||||||||||||    
T  23500774 aatcgaacccgatattccccga-tacgtctttggaaggagctccttgccaccggagcccaaacaacttggtt 23500844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 10 - 101
Target Start/End: Original strand, 40968987 - 40969078
Alignment:
Q  10 caaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||||||||  | | ||||||||||||||||||||||  |  |||||||||||| || ||||||| |||| ||| |||| ||||||||||    
T  40968987 caaacgttgttttccctggaaatcgaacccggtattccctgagaacgtccttggaatgaactcattgccactagagcccaagcaacttggtt 40969078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 3811768 - 3811854
Alignment:
Q  15 gttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||||| | || ||||||||||| |||||| | | ||||||||||||||||| || ||| || || || |||||||||||||||    
T  3811768 gttgttccctctgggaatcgaacccgatattcctcgagtacgtccttggaaggagttccttgccattgaagaccaaacaacttggtt 3811854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 11069919 - 11069821
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||| |||||||||||||| |  | ||||||||| ||||||||||   ||||||||||||| |||||| | | || ||||| | |||||||||||||    
T  11069919 cactggccaaacgttgttccccctcggaatcgaacctggtattccccgggtacgtccttggaatgagctcctagccattggagccaaaacaacttggtt 11069821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 102
Target Start/End: Original strand, 16813231 - 16813328
Alignment:
Q  4 actggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    |||||||||||||||||||| | | || | ||||  ||||||| || | |||||||||||||||||||| |||||| ||||| | |||||||| |||||    
T  16813231 actggtcaaacgttgttccc-ctgaaagttgaacttggtattctccgagtacgtccttggaaggagctccttgtcagtggagcctaaacaactaggttt 16813328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 102
Target Start/End: Original strand, 16852510 - 16852607
Alignment:
Q  4 actggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    |||||||||||||||||||| | | || | ||||  ||||||| || | |||||||||||||||||||| |||||| ||||| | |||||||| |||||    
T  16852510 actggtcaaacgttgttccc-ctgaaagttgaacttggtattctccgagtacgtccttggaaggagctccttgtcagtggagcctaaacaactaggttt 16852607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 98
Target Start/End: Original strand, 28616470 - 28616540
Alignment:
Q  29 aaatcgaacccggtattccccaaatacgtccttggaaggagctcatt-gtcactggagtccaaacaacttg 98  Q
    |||||||||||| |||||| |  ||| |||||||||||||| || || |||||||||||||||||||||||    
T  28616470 aaatcgaacccgatattccgcggatatgtccttggaaggagttcctttgtcactggagtccaaacaacttg 28616540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 101
Target Start/End: Complemental strand, 29653644 - 29653571
Alignment:
Q  27 ggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||||||| |||||||| ||  | |||||||||||||| || |||||| |||||||| |||||||||||||||    
T  29653644 ggaaatcgaatccggtatttccggagtacgtccttggaagaagttcattgccactggag-ccaaacaacttggtt 29653571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 7787084 - 7787003
Alignment:
Q  16 ttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaactt 97  Q
    |||||||| | |||||||||||||||||||||||   |||||||| | |||||| || ||| |||||||| |||| ||||||    
T  7787084 ttgttccccctggaaatcgaacccggtattccccgggtacgtcctagaaaggagttccttgccactggagcccaaccaactt 7787003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 53 - 94
Target Start/End: Complemental strand, 34722672 - 34722631
Alignment:
Q  53 tacgtccttggaaggagctcattgtcactggagtccaaacaa 94  Q
    |||||||||||||||||||| |||||||||||| ||||||||    
T  34722672 tacgtccttggaaggagctccttgtcactggagcccaaacaa 34722631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 39201571 - 39201672
Alignment:
Q  1 cacactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggt 100  Q
    |||||||| ||||| |||||||| | |  |||||||  ||||||||| | | |||||||||||||||||||| ||| ||||  || |||| |||||||||    
T  39201571 cacactggccaaacattgttccccctgagaatcgaattcggtattcctcgagtacgtccttggaaggagctccttgccactatagcccaatcaacttggt 39201670  T
Q  101 tt 102  Q
    ||    
T  39201671 tt 39201672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 4080409 - 4080477
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttg 98  Q
    ||||||| || ||||| |||  ||||||| ||||||||||||  | |||||||||||||||||||||||    
T  4080409 aatcgaatccagtatttcccggatacgtcattggaaggagcttctcgtcactggagtccaaacaacttg 4080477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 41031969 - 41032068
Alignment:
Q  1 cacactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggt 100  Q
    |||||||| |||  ||||||||| | || ||||||||||||| |||||    |||||||||||||||||||| ||| |||||||| |||| ||| |||||    
T  41031969 cacactggccaagtgttgttccccctgggaatcgaacccggtgttccctgg-tacgtccttggaaggagctccttgccactggagcccaagcaatttggt 41032067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 18649118 - 18649189
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||| |||||||||||  ||| | |||||||||| ||||  ||| |||||||| |||||||||||||||    
T  18649118 aatcgaatccggtattccctgaatgcatccttggaagcagcttcttgccactggagcccaaacaacttggtt 18649189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 20963199 - 20963273
Alignment:
Q  27 ggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    ||||||||||| || ||||||||  ||||||| |||||||||| || ||| |||||||| ||||||||||| ||||    
T  20963199 ggaaatcgaactcg-tattccccggatacgtcattggaaggaggtccttgccactggagcccaaacaactttgttt 20963273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 44945608 - 44945537
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||| ||||| |||||| || | |||||||||||||||||||| ||| |||| ||| |||| ||||||||||    
T  44945608 aatcaaacccagtattctccgagtacgtccttggaaggagctccttgccacttgagcccaagcaacttggtt 44945537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 103
Target Start/End: Original strand, 3848981 - 3849079
Alignment:
Q  5 ctggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtttt 103  Q
    |||| ||||||||||| || | |  ||||||||||||||||| ||| ||||||||||| || || ||| || |||||||||  ||| ||||||| ||||    
T  3848981 ctggccaaacgttgtttcccctgataatcgaacccggtattctccagatacgtccttgaaatgaactccttatcactggagctcaagcaacttgatttt 3849079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 10669633 - 10669535
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||| ||| |||||||| | | || |||| |||||||||  |||||  ||||||||||||||||| || ||  | ||||||||||| ||||||||||    
T  10669633 cactggccaagcgttgttctccctgggaatcaaacccggtagcccccaggtacgtccttggaaggagatccttacccctggagtccaagcaacttggtt 10669535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 101
Target Start/End: Complemental strand, 44773266 - 44773208
Alignment:
Q  43 attccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||| |||||||||||| ||||||| | ||| |||| |||||||| ||||||||||    
T  44773266 attccccgaatacgtccttgaaaggagcgccttgccactagagtccaagcaacttggtt 44773208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 9251454 - 9251409
Alignment:
Q  53 tacgtccttggaaggagctcattgtcactggagtccaaacaacttg 98  Q
    |||||| ||||||||||||||||||||||| || | ||||||||||    
T  9251454 tacgtctttggaaggagctcattgtcactgaagcctaaacaacttg 9251409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 10823101 - 10823032
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctc 72  Q
    |||||| ||| |||||||||  | || |||| |||||||||||||||   ||||||||||||||||||||    
T  10823101 cactggccaagcgttgttcctcctgggaatcaaacccggtattccccgggtacgtccttggaaggagctc 10823032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 20533132 - 20533064
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttg 98  Q
    |||| |||||| ||||||||| ||| ||| ||||||||||||| ||  ||||| || ||||||||||||    
T  20533132 aatcaaacccgatattccccagatatgtctttggaaggagctccttaacactgaagcccaaacaacttg 20533064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 97
Target Start/End: Complemental strand, 24179562 - 24179518
Alignment:
Q  53 tacgtccttggaaggagctcattgtcactggagtccaaacaactt 97  Q
    |||||||||||||||||||| ||| |||| ||| |||||||||||    
T  24179562 tacgtccttggaaggagctctttgccactagagcccaaacaactt 24179518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 102
Target Start/End: Original strand, 34130370 - 34130464
Alignment:
Q  6 tggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    |||||||||||||||| | | | |||||||||| | |||| ||| ||||||| |||||||| | ||| ||| |||||||| |||||||| |||||||    
T  34130370 tggtcaaacgttgttctc-ctgaaaatcgaacctgatatttccctaatacgt-cttggaagaaactccttgccactggaggccaaacaatttggttt 34130464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 37560187 - 37560119
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttg 98  Q
    ||||||||| |||||||| |   |||||||||||||||||||  ||  |||||||| ||||||||||||    
T  37560187 aatcgaacctggtattcctcgggtacgtccttggaaggagcttcttaccactggagcccaaacaacttg 37560119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 94
Target Start/End: Original strand, 39806977 - 39807041
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaa 94  Q
    ||||||||||||||||||||   |||||||||| |||||||   ||| |||||||| ||||||||    
T  39806977 aatcgaacccggtattccccgggtacgtccttgtaaggagcatcttgccactggagcccaaacaa 39807041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 3e-24; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 12705058 - 12704957
Alignment:
Q  1 cacactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggt 100  Q
    |||||||||||| |||||||||  |  | ||||||||||||||||||||   |||||||||||||||||||| ||| |||||||||||||||||||||||    
T  12705058 cacactggtcaagcgttgttcctcctcggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagtccaaacaacttggt 12704959  T
Q  101 tt 102  Q
    ||    
T  12704958 tt 12704957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 1538461 - 1538375
Alignment:
Q  15 gttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||||| | || |||||||||||||||||||| |||||||||| ||||||||||| ||| |||||||| |||||||||||||||    
T  1538461 gttgttccccctgggaatcgaacccggtattccccgaatacgtcctcggaaggagctccttgccactggagcccaaacaacttggtt 1538375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 9812916 - 9812815
Alignment:
Q  1 cacactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggt 100  Q
    |||||||| ||| |||||||||  |  | ||||||||||||||||||||   |||||||||||||||||||| ||| |||||||||||||||||||||||    
T  9812916 cacactggccaagcgttgttcctcctcggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagtccaaacaacttggt 9812817  T
Q  101 tt 102  Q
    ||    
T  9812816 tt 9812815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 41163525 - 41163623
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    |||||| |||||||||||||| | || ||||||||||||||||||||   ||||| |||||||||||||| ||| |||||||| ||||||||||||||||    
T  41163525 cactggccaaacgttgttccc-ctgggaatcgaacccggtattccccgggtacgttcttggaaggagctccttgccactggagcccaaacaacttggttt 41163623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 25417248 - 25417345
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||| ||| |||||||||| | || |||||||||||||||||||| | |||||||||||||||||||| ||| |||||||| ||||| |||||||||    
T  25417248 cactggccaagcgttgttccccctgggaatcgaacccggtattccccgagtacgtccttggaaggagctccttgccactggagcccaaa-aacttggtt 25417345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 26077183 - 26077085
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||| ||| |||||||||| | || |||||||||  ||||||||||||||||||||||||| |||||| ||  |||||||| |||||||||||||||    
T  26077183 cactggccaagcgttgttccctctgggaatcgaacctagtattccccaaatacgtccttggaatgagctccttaccactggagcccaaacaacttggtt 26077085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 30 - 102
Target Start/End: Original strand, 3654004 - 3654076
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    ||||||||||||||||| ||   ||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  3654004 aatcgaacccggtattctccgggtacgtccttggaaagagctcattgtcactggagcccaaacaacttggttt 3654076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 30 - 102
Target Start/End: Complemental strand, 12766146 - 12766074
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    ||||||||||||||||||||   |||||||||||||||||||| ||| |||| ||||||||||||||||||||    
T  12766146 aatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactcgagtccaaacaacttggttt 12766074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 5731985 - 5732084
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    |||||| ||| |||||||||  | || ||||||||||||||||||||   |||||||||||||||||||| ||| |||||||| |||| |||||||||||    
T  5731985 cactggccaagcgttgttcctcctgggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagcccaagcaacttggttt 5732084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 102
Target Start/End: Complemental strand, 30349621 - 30349522
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    |||||| ||| | |||||||| |  |||||| |||||||||||||||  ||||||||||||||||| ||| ||| |||||||| ||||||||||||||||    
T  30349621 cactggccaatcattgttccccctagaaatcaaacccggtattccccggatacgtccttggaaggaactccttgccactggagcccaaacaacttggttt 30349522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 38897784 - 38897882
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    |||||| ||| |||||||||| | |||||||||||||||||||||||| ||||||||||| || |||||| ||| |||| |||| ||| |||||||||||    
T  38897784 cactggccaagcgttgttccc-ctggaaatcgaacccggtattccccatatacgtccttgtaaagagctccttgccacttgagttcaagcaacttggttt 38897882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 18136357 - 18136443
Alignment:
Q  15 gttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||||| | || ||||||||||||||||| ||  ||||||| ||||||||||||| ||| |||||||| |||||||||||||||    
T  18136357 gttgttccccctgggaatcgaacccggtattctccggatacgtctttggaaggagctccttgccactggagcccaaacaacttggtt 18136443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 19572754 - 19572668
Alignment:
Q  15 gttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||||| | || |||| |||||||||||||||  ||||||||||||||||||||| ||| |||||||| |||| ||||||||||    
T  19572754 gttgttccccctgggaatctaacccggtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaacttggtt 19572668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 42086369 - 42086271
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||||||| |||||||||| | || |||||||||||||||||| |   |||||||||||||||||||| ||| ||| |||| |||| ||||||||||    
T  42086369 cactggtcaagcgttgttccccctgggaatcgaacccggtattcctcgggtacgtccttggaaggagctccttgccaccggagcccaagcaacttggtt 42086271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 7866625 - 7866524
Alignment:
Q  1 cacactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggt 100  Q
    |||||||| ||| |||||||||  |  | |||||||||||||||||| |   |||||||||||||||||||| ||| ||||||||||||| |||||||||    
T  7866625 cacactggccaagcgttgttcctcctcggaatcgaacccggtattcctcgggtacgtccttggaaggagctccttgccactggagtccaagcaacttggt 7866526  T
Q  101 tt 102  Q
    ||    
T  7866525 tt 7866524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 30 - 102
Target Start/End: Complemental strand, 2485212 - 2485140
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    |||||||||| ||||||||  ||||||||||||||| |||||| ||| || ||||||||||||||||||||||    
T  2485212 aatcgaacccagtattccctgaatacgtccttggaatgagctccttgccattggagtccaaacaacttggttt 2485140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 15 - 103
Target Start/End: Complemental strand, 28857158 - 28857070
Alignment:
Q  15 gttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtttt 103  Q
    ||||||||| | || ||||||||||||||||||||   | |||||||||||||||||| ||| |||||||| |||| ||||||||||||    
T  28857158 gttgttccccctgggaatcgaacccggtattccccgggtgcgtccttggaaggagctccttgccactggagcccaagcaacttggtttt 28857070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 6767143 - 6767214
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||||||||||||||||   |||||||||||||||||||| ||| |||||||| |||| ||||||||||    
T  6767143 aatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagcccaagcaacttggtt 6767214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 8513534 - 8513463
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||||||||||||||||   |||||||||||||||||||| ||| |||| |||||||| ||||||||||    
T  8513534 aatcgaacccggtattccccgggtacgtccttggaaggagctccttgccacttgagtccaagcaacttggtt 8513463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 27 - 98
Target Start/End: Complemental strand, 18327788 - 18327717
Alignment:
Q  27 ggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttg 98  Q
    ||||||||||||| ||||| ||  |||||||||||||||||||||| ||| |||||||||||||| ||||||    
T  18327788 ggaaatcgaacccagtatttcctgaatacgtccttggaaggagctccttgccactggagtccaaaaaacttg 18327717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 35403604 - 35403675
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||||||||||||| ||| | |||||||||||||||||||| ||| |||||||| |||||||| ||||||    
T  35403604 aatcgaacccggtatttcccgagtacgtccttggaaggagctccttgccactggagcccaaacaagttggtt 35403675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 35561895 - 35561981
Alignment:
Q  15 gttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||||| | |||| |||||| || ||||||||  ||||||| ||||||||||||| ||| ||||||||||||| ||||||||||    
T  35561895 gttgttccctctggaagtcgaactcgatattccccggatacgtcattggaaggagctctttgccactggagtccaagcaacttggtt 35561981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 14 - 103
Target Start/End: Original strand, 7308440 - 7308529
Alignment:
Q  14 cgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtttt 103  Q
    |||||||||| | || ||||||||||| |||||| ||||||||||||||||| |||||| ||| |||| ||  |||||||||||| ||||    
T  7308440 cgttgttccccctgggaatcgaacccgatattcctcaaatacgtccttggaatgagctccttgccactagaacccaaacaacttgatttt 7308529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 29 - 102
Target Start/End: Complemental strand, 14728098 - 14728025
Alignment:
Q  29 aaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    |||||||| |||||||| |||||| | | |||||||| |||||||||| |||||||| ||||||||||||||||    
T  14728098 aaatcgaatccggtatttcccaaaaatgaccttggaatgagctcattgccactggagcccaaacaacttggttt 14728025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 10 - 102
Target Start/End: Original strand, 38297036 - 38297128
Alignment:
Q  10 caaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    ||||||||||||||   || ||| |||||||||||||| ||| ||| ||||| |||||||||| ||| |||||||| |||||||| |||||||    
T  38297036 caaacgttgttccccttgggaattgaacccggtattcctcaagtacatccttagaaggagctccttgccactggagcccaaacaatttggttt 38297128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 101
Target Start/End: Original strand, 18294579 - 18294646
Alignment:
Q  34 gaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||||||||| || | || |||||||||||||| || ||||||||| ||||||||||||||||||    
T  18294579 gaacccggtattctccgagtatgtccttggaaggagttccttgtcactgaagtccaaacaacttggtt 18294646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 21149776 - 21149717
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttg 62  Q
    ||||||||||||||||||||| | | |||||||||| |||||||| ||||||||||||||    
T  21149776 cactggtcaaacgttgttccccctgaaaatcgaacctggtattcctcaaatacgtccttg 21149717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 28856992 - 28856921
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||||||||||||||||   | |||||||||||||||||| ||| |||||||| |||| ||||||||||    
T  28856992 aatcgaacccggtattccccgggtgcgtccttggaaggagctccttgccactggagcccaagcaacttggtt 28856921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 1899043 - 1898953
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaaca 93  Q
    |||||| ||| |||||||||| | || ||||||||||||||||||||   ||| |||||||||||||||| ||| ||||| || |||||||    
T  1899043 cactggccaagcgttgttccccctgggaatcgaacccggtattccccgggtacatccttggaaggagctccttgccactgtagcccaaaca 1898953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 4 - 98
Target Start/End: Original strand, 23247417 - 23247511
Alignment:
Q  4 actggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttg 98  Q
    |||| |||| |||||||||  | || ||||||||||| |||||||||  ||||||||||||| |||||| |||  |||| |||||||||||||||    
T  23247417 actgatcaagcgttgttcctcctgggaatcgaacccgatattccccaggtacgtccttggaatgagctccttgctactgaagtccaaacaacttg 23247511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 1826872 - 1826799
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtttt 103  Q
    ||||||||| | |||||||| | |||||| |||||||||||||||||  |||| || |||||||||||||||||    
T  1826872 aatcgaacctgatattccccgagtacgtctttggaaggagctcattgctactgaagcccaaacaacttggtttt 1826799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 20223071 - 20222998
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtttt 103  Q
    ||||||||||| ||||||||| ||||||| ||||||||||||| ||| ||||  |||||||| || ||||||||    
T  20223071 aatcgaacccgatattccccagatacgtctttggaaggagctccttgccactacagtccaaataatttggtttt 20222998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 101
Target Start/End: Complemental strand, 23383641 - 23383592
Alignment:
Q  52 atacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||||||||||||||||| ||| |||||||| |||||||||||||||    
T  23383641 atacgtccttggaaggagctccttgccactggagcccaaacaacttggtt 23383592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 24499000 - 24498927
Alignment:
Q  28 gaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||||||||| ||||| ||| ||||||||||||||||||||| |||  ||| ||| |||||||||| ||||    
T  24499000 gaaatcgaacccgatattctccagatacgtccttggaaggagctccttgctactagagcccaaacaactcggtt 24498927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 107
Target Start/End: Complemental strand, 39728402 - 39728325
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttttaaat 107  Q
    ||||||||| ||||||||||   ||||| ||||||| |||||| ||| |||||||| |||||||||||||||| ||||    
T  39728402 aatcgaacctggtattccccgggtacgttcttggaaagagctccttgccactggagcccaaacaacttggtttcaaat 39728325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 30 - 102
Target Start/End: Complemental strand, 20525853 - 20525781
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    ||||||||||| ||||||||  |||| |||||| ||||||||| ||| |||||||| |||| |||||||||||    
T  20525853 aatcgaacccgatattccccggatacatccttgaaaggagctccttgccactggagcccaagcaacttggttt 20525781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 20682682 - 20682782
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaa-ggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||| ||| |||||||||| | ||||||| |||||  ||||||||   ||||||||| ||| ||||||| |||||||||||| |||| ||||||||||    
T  20682682 cactggccaagcgttgttccccctggaaatctaacccaatattccccgggtacgtccttagaatggagctccttgtcactggagcccaagcaacttggtt 20682781  T
Q  102 t 102  Q
    |    
T  20682782 t 20682782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 81
Target Start/End: Complemental strand, 30995151 - 30995085
Alignment:
Q  15 gttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcact 81  Q
    ||||||||| | || ||||||||| |||||||||||  |||||||||||||||||||| ||| ||||    
T  30995151 gttgttccccctgggaatcgaacctggtattccccatgtacgtccttggaaggagctccttgccact 30995085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 5079359 - 5079274
Alignment:
Q  17 tgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    ||||||| | ||||||| | ||||||||||| |  |||||| |||||||||||||| ||| ||| |||  ||||||||||||||||    
T  5079359 tgttccccctggaaatcaaccccggtattccacggatacgtgcttggaaggagctctttgccaccggaacccaaacaacttggttt 5079274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 14152094 - 14152001
Alignment:
Q  1 cacactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaa 94  Q
    |||||||| ||| ||||||||||   |  |||||||||||||||||||||  ||| || ||||||||||||| ||| |||||||| | ||||||    
T  14152094 cacactggccaagcgttgttccctatgagaatcgaacccggtattccccaggtacatcattggaaggagctccttgccactggagccgaaacaa 14152001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 20692948 - 20692880
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttg 98  Q
    |||| |||||||||||||||   |||||||||||||| ||||| ||| |||| ||| ||||||||||||    
T  20692948 aatcaaacccggtattccccgggtacgtccttggaagaagctctttgccactagagcccaaacaacttg 20692880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 82
Target Start/End: Original strand, 14588682 - 14588761
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactg 82  Q
    |||||||||| |||| ||||  | | |||||||||||| ||||||||| ||||||||||| ||| ||||| ||| |||||    
T  14588682 cactggtcaagcgttattcctcctgaaaatcgaacccgatattccccagatacgtccttgaaagaagctccttgccactg 14588761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 28862840 - 28862785
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggag 85  Q
    ||||||||| | |||||||| |||||||| ||||||||||||| ||| ||||||||    
T  28862840 aatcgaacctgatattccccgaatacgtctttggaaggagctccttgccactggag 28862785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 31890132 - 31890032
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttgga---aggagctcattgtcactggagtccaaacaacttgg 99  Q
    ||||||||||||||||||||  |  |||||||||  ||||||| ||||| ||| ||||||||   |||||||| ||| ||| |||| |||||||||||||    
T  31890132 cactggtcaaacgttgttcctcctagaaatcgaattcggtatttcccaa-tacatccttggaggaaggagctctttgccacgggagcccaaacaacttgg 31890034  T
Q  100 tt 101  Q
    ||    
T  31890033 tt 31890032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 37263256 - 37263185
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||||||| ||||||||   ||||||||| |||||| ||| ||| |||||||| |||| ||||||||||    
T  37263256 aatcgaacccgatattccccgggtacgtccttagaaggaactccttgccactggagcccaagcaacttggtt 37263185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 11845866 - 11845944
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcact 81  Q
    |||||| |||||||||||||| |  ||||||||||||| |||| | |   |||||||||||||||||||| ||| ||||    
T  11845866 cactggccaaacgttgttccccctcgaaatcgaacccgatatttctcgggtacgtccttggaaggagctccttgccact 11845944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 72
Target Start/End: Complemental strand, 13664275 - 13664233
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctc 72  Q
    ||||||| ||||||||||| | |||||||||||||||||||||    
T  13664275 aatcgaatccggtattccctagatacgtccttggaaggagctc 13664233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 100
Target Start/End: Complemental strand, 36783263 - 36783193
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggt 100  Q
    ||||||||| | |||||||| | ||| ||||||| ||||| || |||||||| ||| ||||||||||||||    
T  36783263 aatcgaacctgatattccccgagtacatccttggcaggagatccttgtcactagagcccaaacaacttggt 36783193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 102
Target Start/End: Original strand, 24500092 - 24500141
Alignment:
Q  53 tacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    ||||||||| ||| |||||| ||||||||| || ||||||||||||||||    
T  24500092 tacgtccttagaatgagctccttgtcactgaagcccaaacaacttggttt 24500141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 35638096 - 35638193
Alignment:
Q  1 cacactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttg 98  Q
    |||||||  |||||||||||||  | | ||||||||  |  |||||||||||||||||| ||||||||| || ||||||| | |  ||||||||||||    
T  35638096 cacactgaccaaacgttgttcctcctgaaaatcgaattcaatattccccaaatacgtccctggaaggagttccttgtcacagaatcccaaacaacttg 35638193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 101
Target Start/End: Complemental strand, 16755077 - 16755005
Alignment:
Q  29 aaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||||||| |||||||||  ||||||| |||||| |||||| ||| ||||| || ||||  |||||||||    
T  16755077 aaatcgaacccagtattccccggatacgtctttggaaagagctccttgccactgaagcccaaggaacttggtt 16755005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 20255377 - 20255313
Alignment:
Q  37 cccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||||||||| | ||||||||| ||| |||||| ||| |||  ||| |||||||||||||||    
T  20255377 cccggtattccccgagtacgtccttagaatgagctccttgccaccagagcccaaacaacttggtt 20255313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 97
Target Start/End: Original strand, 25950673 - 25950741
Alignment:
Q  29 aaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaactt 97  Q
    ||||| |||| | |||||||| | ||||||||| |||||||||| ||  |||||||| |||||||||||    
T  25950673 aaatcaaacctgatattccccgagtacgtcctttgaaggagctccttaccactggagcccaaacaactt 25950741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 102
Target Start/End: Complemental strand, 41800992 - 41800920
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    ||||||||||| ||||||||| ||||||| ||| |||||  || ||  ||| |||||||||||||||| ||||    
T  41800992 aatcgaacccgatattccccagatacgtcattgaaaggaattccttaccacgggagtccaaacaacttagttt 41800920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 2e-22; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 33647767 - 33647669
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||||||| |||||||| | | |||||||||||||||||||||||| ||||||||||| ||||||||| ||| |||| ||| |||| ||||||||||    
T  33647767 cactggtcaagcgttgttctccctggaaatcgaacccggtattccccagatacgtccttgaaaggagctccttgccactagagcccaagcaacttggtt 33647669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 3 - 102
Target Start/End: Complemental strand, 2559353 - 2559254
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    |||||| ||| |||||||||  |  ||||||||| |||||||||||||  |||||||||||||||||||| ||| |||||||| ||||||||||||||||    
T  2559353 cactggccaagcgttgttcctcctagaaatcgaatccggtattccccaggtacgtccttggaaggagctcgttgccactggagcccaaacaacttggttt 2559254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 41162946 - 41163045
Alignment:
Q  2 acactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||| |||  ||||||||| | ||||||||||| ||||||| |||  ||||||||||||||||||||| |||||||||||| |||| ||||||||||    
T  41162946 acactggccaagtgttgttccctctggaaatcgaactcggtatttcccggatacgtccttggaaggagctccttgtcactggagcccaagcaacttggtt 41163045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 1446860 - 1446774
Alignment:
Q  15 gttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||||| | || ||||||||||||||||||||  ||||||||||||||||||||| ||| |||||||| |||| ||||||||||    
T  1446860 gttgttccccctgggaatcgaacccggtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaacttggtt 1446774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 29895821 - 29895735
Alignment:
Q  15 gttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||||| | || ||||||||||||||||||||  ||||||||||||||||||||| ||| |||||||| |||| ||||||||||    
T  29895821 gttgttccccctgggaatcgaacccggtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaacttggtt 29895735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 52950128 - 52950030
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||| ||| |||||||||| | || ||||||||||| |||||||||  |||||||||||||||||||| ||| |||| ||| |||||||||||||||    
T  52950128 cactggccaagcgttgttccccctgggaatcgaacccgatattccccaggtacgtccttggaaggagctccttgccactagagcccaaacaacttggtt 52950030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 53599106 - 53599008
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||| |||||||||||||  | || ||||||||||||||||||||   |||||||||||||||||||| ||| || ||||| |||||||||||||||    
T  53599106 cactggccaaacgttgttcctcctgggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccaatggagcccaaacaacttggtt 53599008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 12703608 - 12703708
Alignment:
Q  1 cacactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggt 100  Q
    |||||||||||| |||||||||||| ||||||||||| | ||||||| | | ||||||||| |||||| ||| ||| |||||||| |||| |||||||||    
T  12703608 cacactggtcaagcgttgttcccactggaaatcgaactcagtattcctcgagtacgtcctttgaaggatctccttgccactggagcccaagcaacttggt 12703707  T
Q  101 t 101  Q
    |    
T  12703708 t 12703708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 102
Target Start/End: Complemental strand, 13073584 - 13073485
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    |||||| ||||| ||||||||   || |||||||| |||||||| |||  |||||||||||||||||||||||| |||| ||| ||||||||||||||||    
T  13073584 cactggccaaacattgttccccatgggaatcgaactcggtattctccaggtacgtccttggaaggagctcattgccactagagcccaaacaacttggttt 13073485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 102
Target Start/End: Complemental strand, 38166073 - 38165974
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    |||||| ||| |||||||||| | || |||| ||||| |||||||||  ||||||||||||||||||||| ||| || ||||| ||||||||||||||||    
T  38166073 cactggccaagcgttgttccccctgggaatccaacccagtattccccggatacgtccttggaaggagctccttgccagtggagcccaaacaacttggttt 38165974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 6779245 - 6779159
Alignment:
Q  15 gttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||||| | || ||||||||||||||||| |||  |||||||||||||| ||||| ||| |||||||| |||||||||||||||    
T  6779245 gttgttccccctgggaatcgaacccggtattctccaggtacgtccttggaagaagctccttgccactggagcccaaacaacttggtt 6779159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 24166496 - 24166398
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||| ||||||||||| ||   || |||||||||| ||||||||| | |||||||||||||||||||| ||| |||||||| |||| ||||||||||    
T  24166496 cactggccaaacgttgtttcccttgggaatcgaacccagtattccccgagtacgtccttggaaggagctccttgccactggagcccaatcaacttggtt 24166398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 47078504 - 47078406
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||| ||| |||||||||| | || ||||||||||||||||||||   |||||||||||||||||||| ||| |||||||  |||| ||||||||||    
T  47078504 cactggccaagcgttgttccccctgggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggaacccaagcaacttggtt 47078406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 27248445 - 27248376
Alignment:
Q  32 tcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||||||||||||||  ||||||||||||||||||||| ||| |||||||| |||| ||||||||||    
T  27248445 tcgaacccggtattccccggatacgtccttggaaggagctcgttgccactggagcccaagcaacttggtt 27248376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 30 - 102
Target Start/End: Original strand, 27531749 - 27531821
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    |||||||||||||||||||    |||||||||||||||||||| ||| ||||||||||||| |||||||||||    
T  27531749 aatcgaacccggtattccctgggtacgtccttggaaggagctccttgccactggagtccaagcaacttggttt 27531821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 102
Target Start/End: Complemental strand, 14124062 - 14123963
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    |||||| |||| ||||||||| | || ||||||||| |||||||| ||| ||||| |||||||||||||  ||| || ||||| ||||||||||||||||    
T  14124062 cactggccaaatgttgttccccctgggaatcgaacctggtattcctcaagtacgttcttggaaggagcttcttgccattggagcccaaacaacttggttt 14123963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 15840026 - 15840081
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggag 85  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||    
T  15840026 aatcgaacccggtattccccaagtacgtccttggaaggagctccttgccactggag 15840081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 38075452 - 38075381
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||||||||||||| || |||||||||||||||||| ||| ||| | |||||| |||||||||||||||    
T  38075452 aatcgaacccggtattctccgaatacgtccttggaaggaactccttgccgctggagcccaaacaacttggtt 38075381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 55921068 - 55920981
Alignment:
Q  15 gttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    ||||||||| | || ||||||||||||||||||||   | |||||||||||||||||| ||| |||||||| |||| |||||||||||    
T  55921068 gttgttccccctgggaatcgaacccggtattccccgggtgcgtccttggaaggagctccttgccactggagcccaagcaacttggttt 55920981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 101
Target Start/End: Original strand, 34667695 - 34667765
Alignment:
Q  31 atcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||||||||||||||||   |||||||||||||||||||| ||| |||| ||| |||||||||||||||    
T  34667695 atcgaacccggtattccccgggtacgtccttggaaggagctccttgccactagagcccaaacaacttggtt 34667765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 52 - 101
Target Start/End: Original strand, 19651559 - 19651608
Alignment:
Q  52 atacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  19651559 atacgtccttggaaggagctcattgccactggagcccaaacaacttggtt 19651608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 1940850 - 1940938
Alignment:
Q  14 cgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    |||||||||| | || ||||||||||| |||| |||   |||||||||||||||||||| ||| |||| ||| ||||||||||||||||    
T  1940850 cgttgttccccctgggaatcgaacccgatatttcccgggtacgtccttggaaggagctccttgccactagagcccaaacaacttggttt 1940938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 41339458 - 41339558
Alignment:
Q  1 cacactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggt 100  Q
    |||||||| ||| ||||||||||   || | ||||||||||||||| ||   |||||||||||||||||||| ||| |||| ||| ||||||||||||||    
T  41339458 cacactggccaagcgttgttccccttgggagtcgaacccggtattctccgggtacgtccttggaaggagctccttgccactagagcccaaacaacttggt 41339557  T
Q  101 t 101  Q
    |    
T  41339558 t 41339558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 7000543 - 7000472
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||||| ||||||||||| | |||||||||||||||||||  ||| ||||| || |||||||||||||||    
T  7000543 aatcgaactcggtattccccgagtacgtccttggaaggagcttcttgccactgtagcccaaacaacttggtt 7000472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 8889041 - 8888970
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||||||||||||||||  |||||||||| |||||||||| ||| | || ||| |||||||||||||||    
T  8889041 aatcgaacccggtattccccggatacgtccttagaaggagctccttgccgctagagcccaaacaacttggtt 8888970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 26480041 - 26480112
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||||| ||||||||||||  ||||| |||||||||||||| ||| || ||||| |||||||||||||||    
T  26480041 aatcgaactcggtattccccatgtacgtacttggaaggagctccttgccagtggagcccaaacaacttggtt 26480112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 43458632 - 43458561
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||| || ||||||||||||||||||||||||| |||||  ||| |||||||| |||| ||||||||||    
T  43458632 aatcgaatccagtattccccaaatacgtccttggaatgagcttcttgccactggagcccaagcaacttggtt 43458561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 98
Target Start/End: Original strand, 6032731 - 6032800
Alignment:
Q  29 aaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttg 98  Q
    |||| ||||||||||||||||   |||||||||||||||||||| ||| |||||||| |||| |||||||    
T  6032731 aaattgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagcccaagcaacttg 6032800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 95
Target Start/End: Complemental strand, 13552133 - 13552068
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaac 95  Q
    ||||||||||| ||||||||  |||||| |||||||||||||| ||| |||||||| |||||||||    
T  13552133 aatcgaacccgatattccccggatacgtgcttggaaggagctccttgccactggagcccaaacaac 13552068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 34 - 102
Target Start/End: Original strand, 3574542 - 3574610
Alignment:
Q  34 gaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    |||| |||||||||| |  |||||||||||||||||||| ||| |||||||| |||| |||||||||||    
T  3574542 gaactcggtattccctaggtacgtccttggaaggagctccttgccactggagcccaagcaacttggttt 3574610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 4736645 - 4736545
Alignment:
Q  1 cacactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggt 100  Q
    |||| ||| ||||||||||| |||| |  ||| |||||||||||||| |   ||| |||||| ||||||||||||| ||||||||  |||||||||||||    
T  4736645 cacattggccaaacgttgtttccactgagaattgaacccggtattcctcgggtacatccttgaaaggagctcattgccactggagctcaaacaacttggt 4736546  T
Q  101 t 101  Q
    |    
T  4736545 t 4736545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 21192665 - 21192618
Alignment:
Q  26 cggaaatcgaacccggtattccccaaatacgtccttggaaggagctca 73  Q
    ||||| |||||||||||||| |||||||||||| ||||||||||||||    
T  21192665 cggaactcgaacccggtatttcccaaatacgtcattggaaggagctca 21192618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 30 - 107
Target Start/End: Original strand, 5472940 - 5473017
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttttaaat 107  Q
    |||| |||| ||||||||||  ||||||||||| || |||||| ||| |||||||| ||||||||||| |||| ||||    
T  5472940 aatcaaacctggtattccccggatacgtccttgaaatgagctccttgccactggagcccaaacaacttagtttaaaat 5473017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 30 - 71
Target Start/End: Complemental strand, 14567978 - 14567937
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagct 71  Q
    ||||||||| |||||||||||||||||||||| |||||||||    
T  14567978 aatcgaacctggtattccccaaatacgtccttagaaggagct 14567937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 52 - 101
Target Start/End: Complemental strand, 15829696 - 15829647
Alignment:
Q  52 atacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||||||| ||| ||||| |||||||||||| |||||||||||||||    
T  15829696 atacgtccttgaaagaagctccttgtcactggagcccaaacaacttggtt 15829647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 102
Target Start/End: Original strand, 15732540 - 15732612
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    ||||||||||||||||| ||  ||||||||||||||| |  |  ||| |||||||| ||||||||||||||||    
T  15732540 aatcgaacccggtattctccggatacgtccttggaagaattttcttgccactggagcccaaacaacttggttt 15732612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 103
Target Start/End: Complemental strand, 20354631 - 20354583
Alignment:
Q  55 cgtccttggaaggagctcattgtcactggagtccaaacaacttggtttt 103  Q
    ||||||||||||||| || ||| ||||||||||||||||| ||||||||    
T  20354631 cgtccttggaaggagatccttgccactggagtccaaacaagttggtttt 20354583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 54524979 - 54524883
Alignment:
Q  2 acactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttg 98  Q
    |||||||| || |||||||||| | || ||||||| | ||||||| | ||||||||| ||||||||||||| ||| |||| ||| | || |||||||    
T  54524979 acactggtaaagcgttgttccctctgggaatcgaatctggtattctctaaatacgtcattggaaggagctctttgccactagagcctaagcaacttg 54524883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 3159534 - 3159597
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaag 66  Q
    |||||| ||| |||||||||| | |||| ||||||||||||||| ||  |||||||||||||||    
T  3159534 cactggccaagcgttgttccccctggaagtcgaacccggtattctccggatacgtccttggaag 3159597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 42 - 101
Target Start/End: Complemental strand, 31588691 - 31588632
Alignment:
Q  42 tattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||||| ||||||||||| ||| |||||| ||| ||||| || |||||||||||||||    
T  31588691 tattccccgaatacgtccttagaacgagctccttgacactgaagcccaaacaacttggtt 31588632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 36145280 - 36145362
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggag 85  Q
    ||||| |||| ||||||| || | || ||||||||||||||||||||   ||||||||||||| |||||| ||| ||| ||||    
T  36145280 cactgatcaagcgttgtttcccctgggaatcgaacccggtattccccgggtacgtccttggaatgagctccttgccaccggag 36145362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 7246711 - 7246776
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaagga 68  Q
    |||||| ||| ||||||||||||  | |||||||||| |||||||||   ||||||||||||||||    
T  7246711 cactggccaagcgttgttcccactaggaatcgaacccagtattccccgggtacgtccttggaagga 7246776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 102
Target Start/End: Complemental strand, 14567247 - 14567198
Alignment:
Q  53 tacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    ||||||||||||| |||||| ||| |||||||| |||| |||||||||||    
T  14567247 tacgtccttggaatgagctccttgccactggagcccaagcaacttggttt 14567198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 14858727 - 14858662
Alignment:
Q  33 cgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttg 98  Q
    |||||||||||||| ||   ||| ||||||||||||| ||||||||| |||||  |||||||||||    
T  14858727 cgaacccggtattctccgggtacatccttggaaggagttcattgtcaatggagctcaaacaacttg 14858662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 20421807 - 20421727
Alignment:
Q  15 gttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaact 96  Q
    ||||||||| | |||||||||| || |||||||||| ||||||| ||| ||||||||| ||| ||||| || |||| |||||    
T  20421807 gttgttccccctggaaatcgaa-ccagtattccccagatacgtctttgaaaggagctccttgccactgaagcccaagcaact 20421727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 96
Target Start/End: Original strand, 40272396 - 40272489
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaact 96  Q
    |||||| ||| ||||||||||   |||||||||||||| ||||||||  |||| || |||||| |||||| ||  ||| |||| ||||||||||    
T  40272396 cactggccaagcgttgttccccatggaaatcgaacccgatattccccggatacatcattggaaagagctccttaccaccggagcccaaacaact 40272489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 43468393 - 43468328
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaagga 68  Q
    |||||| ||| |||||||||| | || ||||||||||||||||||||   ||||| ||||||||||    
T  43468393 cactggccaagcgttgttccccctgggaatcgaacccggtattccccgggtacgttcttggaagga 43468328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 48015138 - 48015203
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaagga 68  Q
    |||||| ||| |||||||||||| || |||||||||||||||||| |   |||||| |||||||||    
T  48015138 cactggccaagcgttgttcccactgggaatcgaacccggtattcctcgggtacgtctttggaagga 48015203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 101
Target Start/End: Complemental strand, 9479 - 9382
Alignment:
Q  4 actggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||| ||| |||||||||| | || |||||||||||||||||||||| |||||||||| ||||||||| |||| || |||| |||| ||||||||||    
T  9479 actggccaagcgttgttccccctgggaatcgaacccggtattccccaagtacgtccttgaaaggagctccttgttaccggagcccaagcaacttggtt 9382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 42924 - 42990
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaact 96  Q
    ||||||||||| |||||||||  ||| | |||||||| ||||| ||| ||||||||||||| |||||    
T  42924 aatcgaacccgatattccccaggtacattcttggaagtagctcgttgccactggagtccaagcaact 42990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 44; Significance: 6e-16; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 102
Target Start/End: Complemental strand, 319466 - 319368
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    |||||| ||| |||||||||| |  |||||| |||||||||||||||  ||||||||||||||||||||| ||| |||||||| || | |||||||||||    
T  319466 cactggccaagcgttgttccccctagaaatcaaacccggtattccccggatacgtccttggaaggagctccttgccactggag-cctagcaacttggttt 319368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 616 - 516
Alignment:
Q  1 cacactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggt 100  Q
    ||||||| ||||  ||||||||| | |  ||||||||||||||||||||   |||||||||||||||||||| ||| |||| ||| |||| |||||||||    
T  616 cacactgatcaagtgttgttccccctgcgaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactagagcccaagcaacttggt 517  T
Q  101 t 101  Q
    |    
T  516 t 516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 412118 - 412189
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||||| |||||||||||  ||||||||||||||||||||||| | ||||| || |||| ||||||||||    
T  412118 aatcgaactcggtattccccggatacgtccttggaaggagctcatcgccactgaagcccaagcaacttggtt 412189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 100
Target Start/End: Original strand, 1690 - 1776
Alignment:
Q  14 cgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggt 100  Q
    |||||||||| | |||||||||||| |||||||||||   ||||| ||||||||||||| ||| |||| |||||||| |||||||||    
T  1690 cgttgttccccctggaaatcgaacctggtattccccaggcacgtcattggaaggagctccttgccacttgagtccaagcaacttggt 1776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 26229 - 26129
Alignment:
Q  1 cacactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggt 100  Q
    |||||||| ||| |||||||||| | ||||||||||||| ||||||||||  || |||||| ||||||| |  ||| |||| |||||||| |||||||||    
T  26229 cacactggccaagcgttgttccccctggaaatcgaacccagtattccccaggtatgtccttagaaggagtttcttgccactagagtccaagcaacttggt 26130  T
Q  101 t 101  Q
    |    
T  26129 t 26129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 14 - 102
Target Start/End: Complemental strand, 68550 - 68462
Alignment:
Q  14 cgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    |||||||||| | || ||||||||||| |||| |||   |||||||||||||||||||| ||| |||| ||| ||||||||||||||||    
T  68550 cgttgttccccctgggaatcgaacccgatatttcccgggtacgtccttggaaggagctccttgccactagagcccaaacaacttggttt 68462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 41061 - 40990
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||||||| |||||||  | ||||||| |||||||||||| ||| |||||||| |||||||||||||||    
T  41061 aatcgaacccgatattccctgagtacgtccatggaaggagctccttgccactggagcccaaacaacttggtt 40990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 72676 - 72608
Alignment:
Q  3 cactggtcaaacgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctc 72  Q
    |||||||||| ||||||||||   ||||||||||||||||||| |||  |||||||||||||||||||||    
T  72676 cactggtcaagcgttgttccccttggaaatcgaacccggtatt-ccctgatacgtccttggaaggagctc 72608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 101
Target Start/End: Original strand, 8824 - 8873
Alignment:
Q  52 atacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    ||||||||||||||||||||| ||| |||||||| |||||||||||||||    
T  8824 atacgtccttggaaggagctccttgccactggagcccaaacaacttggtt 8873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 30 - 102
Target Start/End: Complemental strand, 12687 - 12615
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    ||||||||||||||||||||    ||||||||||||||||||  ||| |||| |||||||| |||||||||||    
T  12687 aatcgaacccggtattccccgggcacgtccttggaaggagcttcttgccactagagtccaagcaacttggttt 12615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 98
Target Start/End: Complemental strand, 15351 - 15280
Alignment:
Q  27 ggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttg 98  Q
    |||||||||||||||||||||||   ||| |||||| ||||||||| ||| |||| ||| ||||||||||||    
T  15351 ggaaatcgaacccggtattccccgggtacttccttgtaaggagctccttgccactagagcccaaacaacttg 15280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 12592 - 12521
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||||||||||||| | | | |||||||||||||| ||||| ||| |||| ||| |||||||||||||||    
T  12592 aatcgaacccggtatttctcgagtacgtccttggaagtagctccttgccactagagcccaaacaacttggtt 12521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 25876 - 25947
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||||||  ||||||||| | ||||| |||||||||||||| |||  ||||||| |||||||||||||||    
T  25876 aatcgaaccttgtattccccgagtacgtacttggaaggagctctttgctactggagcccaaacaacttggtt 25947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 34; Significance: 0.0000000006; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 30 - 71
Target Start/End: Original strand, 249397 - 249438
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagct 71  Q
    ||||||||| |||||||||||||||||||||| |||||||||    
T  249397 aatcgaacctggtattccccaaatacgtccttagaaggagct 249438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 271150 - 271237
Alignment:
Q  14 cgttgttcccaccggaaatcgaacccggtattccccaaatacgtccttggaaggagctcattgtcactggagtccaaacaacttggtt 101  Q
    |||||||||| | || ||||||||||| ||||| ||   |||||||||||||||||||| ||| |||  ||| |||| ||||||||||    
T  271150 cgttgttccccctgggaatcgaacccgatattctccgggtacgtccttggaaggagctccttgccaccagagcccaagcaacttggtt 271237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 102
Target Start/End: Original strand, 250128 - 250177
Alignment:
Q  53 tacgtccttggaaggagctcattgtcactggagtccaaacaacttggttt 102  Q
    ||||||||||||| |||||| ||| |||||||| |||| |||||||||||    
T  250128 tacgtccttggaatgagctccttgccactggagcccaagcaacttggttt 250177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 71
Target Start/End: Complemental strand, 8192 - 8151
Alignment:
Q  30 aatcgaacccggtattccccaaatacgtccttggaaggagct 71  Q
    ||||||||||||||||||||   |||||||||||||||||||    
T  8192 aatcgaacccggtattccccgggtacgtccttggaaggagct 8151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University