View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17443_low_5 (Length: 260)
Name: NF17443_low_5
Description: NF17443
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17443_low_5 |
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Alignment Details
Target: chr2 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 5 - 236
Target Start/End: Original strand, 45251984 - 45252215
Alignment:
| Q |
5 |
tgtcgaagaatattgttaaatatgacatttgatactgctttaccacaatttacacacttatgacattactacaatcacggataaatgttgaaagagaaaa |
104 |
Q |
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| T |
45251984 |
tgtcaaagaaaattgttaaatatgacatttgatactgctttaccacaatttacacacttatgacattactacaatcacggataaatgttgaaagagaaaa |
45252083 |
T |
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| Q |
105 |
aggataagtgtatatacaaaagtttaaatgattaccttgattccacgaactgaacgtggtattttcctggaaagtaccaatgccgagtgcaggaaaagat |
204 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
45252084 |
aggataagtgtatatacaaaagtttaaatgattaccttgattccacgaactgaacgtggtattttcctggaaaggaccaatgccgagtgcaggaaaagat |
45252183 |
T |
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| Q |
205 |
tgtggctgaggaaagtacatatagaatcatgg |
236 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
45252184 |
tgtggctgaggaaagtacatatagaatcatgg |
45252215 |
T |
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