View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17445_high_18 (Length: 345)
Name: NF17445_high_18
Description: NF17445
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17445_high_18 |
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Alignment Details
Target: chr5 (Bit Score: 293; Significance: 1e-164; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 13 - 320
Target Start/End: Original strand, 13766330 - 13766638
Alignment:
| Q |
13 |
aatattaatatttt-ttgtctgggtgtgtattttcgaatgctatacgattttgggaggaaaacgttgggccaaaaaactagtgtggttattttttcatcc |
111 |
Q |
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| T |
13766330 |
aatattaatatttttttgtctgggtgtgtattttcgaatgctatacgattttgggaggaaaacgttgggccaaaaaactagtgtggttattttttcatcc |
13766429 |
T |
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| Q |
112 |
ggtcaaaagaaatggttaatttttcgtttttatgatttggaaaacggttaatacatgatgttaaaatctattattggttatgaaacgtaacatggaatca |
211 |
Q |
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| T |
13766430 |
ggtcaaaagaaatggttaatttttcgtttttatgatttggaaaacggttaatacatgatgttaaaatctattattggttatgaaacgtaacatggaatca |
13766529 |
T |
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| Q |
212 |
tcatcatcttctacccatttctcttgttcttcttccattttcctttcacattcttcacccaacactttgctcgttcaaactcatgacactttctggattt |
311 |
Q |
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| T |
13766530 |
tcatcttcttcttcccatttctcttgttcttcttccattttcctttcacattcttcacccaacactttgctcgttcaaactcatgacactttctggattt |
13766629 |
T |
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| Q |
312 |
cacgtgtat |
320 |
Q |
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| T |
13766630 |
cacgtgtat |
13766638 |
T |
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