View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17445_low_26 (Length: 314)
Name: NF17445_low_26
Description: NF17445
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17445_low_26 |
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Alignment Details
Target: chr6 (Bit Score: 216; Significance: 1e-118; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 16 - 301
Target Start/End: Complemental strand, 10069646 - 10069361
Alignment:
| Q |
16 |
aaattgttgtgacactctgtccaaccaccaaccgggcagctgtggatgactgaaaacttttgatcgaannnnnnnataaaaaggaatnnnnnnnttgaat |
115 |
Q |
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| T |
10069646 |
aaattgttgtgacactctgtccaaccaccaaccgggcagctgtggatgactgaaaacttttgatcgaatttttttataaaaaggaataaaaaaattgaat |
10069547 |
T |
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| Q |
116 |
tagagttaacacaagtctagatccgctccgatagttagatggttagtgtaggcctcgatcgttcaaacacctttgacttttaagtatatattgtaacaca |
215 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
10069546 |
tagagttaacacaagtctagatccgctccgatagttagatggttagtgtaggcctcgatcgttcaaacacctttgacttttgagtatatattgtaacaca |
10069447 |
T |
|
| Q |
216 |
ggtgaatgattaagatcagagacaacgtgataaagaggcatgtgagtatctgcgttgcgtttagttaatcgtctcaaaaacaagaa |
301 |
Q |
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|||||||||||||||||||| ||||| | | |||||||||||||||| ||||||||||||| |||||||||||||||||||||||| |
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| T |
10069446 |
ggtgaatgattaagatcagaaacaacataacaaagaggcatgtgagtttctgcgttgcgttcagttaatcgtctcaaaaacaagaa |
10069361 |
T |
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