View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17445_low_29 (Length: 303)
Name: NF17445_low_29
Description: NF17445
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17445_low_29 |
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Alignment Details
Target: chr7 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 290
Target Start/End: Complemental strand, 10034074 - 10033797
Alignment:
| Q |
1 |
cttgggttgggtcttgttcatcttggctcgaatgggagtgacatgggtcaattcctcttct---tcacttaagcccaactcattagttatagattcatca |
97 |
Q |
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| T |
10034074 |
cttgggtcgggtcttgttcctcttggctcgaatgggagtgacatgggccaattcctcttctccttcacttaagcccaa---------------ttcatca |
10033990 |
T |
|
| Q |
98 |
ggttcaatattactatccataacaacctggatagagaagaaacttccaaataactttagtaaagactttggatgtgtggtaatatatcgtgttagttgtt |
197 |
Q |
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||||||||||| |||||||||||||||| | |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| |
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| T |
10033989 |
ggttcaatattgctatccataacaaccttggtagagaagaaacttccaaataactttggtaaagactttggatgtgtggtaatatatcgtgttaattgtt |
10033890 |
T |
|
| Q |
198 |
ttgactgattagtctcgagtggttcttagatcttttaaactcaatataaaaccaattatcaagcgtgcatatgaaaaattatattcacacata |
290 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10033889 |
ttgactgattagtctcgagtggttcttagatcttttaaactcaatataaaaccaattatcaagcgtgcatatgaaaaattatattcacacata |
10033797 |
T |
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