View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17445_low_41 (Length: 237)
Name: NF17445_low_41
Description: NF17445
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17445_low_41 |
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Alignment Details
Target: chr1 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 26578192 - 26578412
Alignment:
| Q |
1 |
ccatagcctcttacgttcaaaatatatagatcaaccaatcattttaatctacaatatatcacgtcatcatcctgtaacgtctatgagtagggctagggca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26578192 |
ccatagcctcttacgttcaaaatatatagatcaaccaatcattttaatctacaatatatcacgtcatcatcctgtaacgtctatgagtagggctagggca |
26578291 |
T |
|
| Q |
101 |
caggccattctatgctatgctacgctgtgagtatatgtcagcctgcagcacctggtcagcttgcttcatggacacagtgggtggccctaactccatccac |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26578292 |
caggccattctatgctatgctacgctgtgagtatatgtcagcctgcagcacctggtcagcttgcttcatggacacagtgggtggccctaactccatccac |
26578391 |
T |
|
| Q |
201 |
cccactcgtgcacgtcattca |
221 |
Q |
| |
|
||||||||||||||||||||| |
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|
| T |
26578392 |
cccactcgtgcacgtcattca |
26578412 |
T |
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