View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17445_low_45 (Length: 221)
Name: NF17445_low_45
Description: NF17445
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17445_low_45 |
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Alignment Details
Target: chr8 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 9828294 - 9828498
Alignment:
| Q |
1 |
atttgtttaatttcctttataaatgttagatggtctggccgtttaattttctttatccaaaactattttgaattaaattcttatgataaaa--aatatga |
98 |
Q |
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| T |
9828294 |
atttgtttaatttcctttataaatgttagatggtctggccgtttaattttctttatccaaaactattttgaattaaattcttatgataaaaaaaatatga |
9828393 |
T |
|
| Q |
99 |
cttgaccaaaataataatattgatataacaagttttgagacaaggtagaagataaaaataaaataaatcaaataagtaacgcaagattaaattagaggca |
198 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
9828394 |
cttgaccaaaataataatattgatataacaagttttgagacaaggtagaagataaaaataaaataaatcaaataagtaacgcaagattaaattagaggca |
9828493 |
T |
|
| Q |
199 |
ctaac |
203 |
Q |
| |
|
||||| |
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| T |
9828494 |
ctaac |
9828498 |
T |
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