View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17446_high_33 (Length: 232)
Name: NF17446_high_33
Description: NF17446
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17446_high_33 |
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Alignment Details
Target: chr8 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 7400168 - 7399952
Alignment:
| Q |
1 |
tgtcaaagttgtttgtgatctctttgagttccttgcaagtgaaaatatgaagatttgatcccactaatgaattggataaatcactcatgacagaaggtga |
100 |
Q |
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| T |
7400168 |
tgtcaaagttgtttgtgatctctttgagttccttgcaagtgaaaatatgaagatttgatcccactaatgaattggataaatcactcatgacagaaggtga |
7400069 |
T |
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| Q |
101 |
tgaataatcacttaaatcagatagagaaattctacatgaacctgtcttttttgaaacaaattttggtgtttccaatgaagggtttttgtccttgaaacaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7400068 |
tgaataatcacttaaatcagatagagaaattctacatgaacctgtcttttttgaaacaaattttggtgtttccaatgaagggtttttgtccttgaaacaa |
7399969 |
T |
|
| Q |
201 |
ccaagtacaaatgattt |
217 |
Q |
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| T |
7399968 |
ccaagtacaaatgattt |
7399952 |
T |
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