View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17452_high_24 (Length: 455)
Name: NF17452_high_24
Description: NF17452
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17452_high_24 |
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Alignment Details
Target: chr7 (Bit Score: 360; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 360; E-Value: 0
Query Start/End: Original strand, 15 - 445
Target Start/End: Original strand, 29483608 - 29484038
Alignment:
| Q |
15 |
atattatatagtgcagaaaaggttatgctttattttggtgatgcctatgtagtagcaaatcaaataaatgtaagatagagaatcaaaaaatcataggaag |
114 |
Q |
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| T |
29483608 |
atattatatagtgcagaaaaggttatgctttattttggtgattcctatgtagtagcaaatcaaataaatgtaagatagagaatcaaaaaatcataggaag |
29483707 |
T |
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| Q |
115 |
acnnnnnnnnnnnnnnnnntactttaaaacaaagcaattatgtaaaagctaataattgtttcttatagcaatgaacatatcctttagcttatcaatgaat |
214 |
Q |
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| T |
29483708 |
acaaaaaaaaatgaaaaaatactttaaaacaaagcaattatgtaaaagctaataattgtttcttatagcaatgaacatatcctttagcttatcaatgaat |
29483807 |
T |
|
| Q |
215 |
gacatgaacaactatatcacatacatcatttcataaaatttgcacatgtgttagagagaggagaagggagaaccattatagaggtgaagcgagggatgga |
314 |
Q |
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| T |
29483808 |
gacatgaacaactatatcacatacatcatttcataaaatttgcacatgtggtagagagaggagaagagagaaccattatagaggtgaagcgagggatgta |
29483907 |
T |
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| Q |
315 |
aagaaaagcatcttcaaccaaagagaaaattggcaagtcatggataggaacttgaaattctaagaatgcaagaatatgcaagcatagagaagtgttgtcc |
414 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29483908 |
aagaaaagcatcttcaaccaaagagaaaattggcaagtcatggataggaacttgaaattctaagaatgcaagaatatgcaagcatagagaagtgttgtcc |
29484007 |
T |
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| Q |
415 |
aaacattgtcccatgggactcactggttcat |
445 |
Q |
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| T |
29484008 |
aagcattgtcccatgggactcactggttcat |
29484038 |
T |
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